a9644c5a49
gnu: you-get: Update to 0.4.1270.
...
* gnu/packages/video.scm (you-get): Update to 0.4.1270.
2019-03-11 02:08:02 +01:00
266cd19eb9
gnu: nginx-documentation: Update to 2019-03-01-2345-7ef11708457e.
...
* gnu/packages/web.scm (nginx-documentation): Update to 2019-03-01-2345-7ef11708457e.
[arguments]: Simplify substitution.
2019-03-11 02:08:02 +01:00
fd46742dd2
gnu: nginx: Update to 1.15.9.
...
* gnu/packages/web.scm (nginx): Update to 1.15.9.
2019-03-11 02:08:02 +01:00
0330d6b2bf
gnu: xf86-video-ati: Update to 19.0.0.
...
* gnu/packages/xorg.scm (xf86-video-ati): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
77ad8ec4fc
gnu: xf86-video-amdgpu: Update to 19.0.0.
...
* gnu/packages/xorg.scm (xf86-video-amdgpu): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
c170080689
gnu: console-setup: Update to 1.190.
...
* gnu/packages/xorg.scm (console-setup): Update to 1.190.
2019-03-11 02:08:01 +01:00
0189045904
gnu: snd: Update to 19.2.
...
* gnu/packages/audio.scm (snd): Update to 19.2.
2019-03-11 02:08:00 +01:00
8b3ad455be
services: guix: Pre-compute the default ACL.
...
This makes the first boot slightly faster.
* gnu/services/base.scm (not-config?): New procedure.
(hydra-key-authorization): Rewrite to pre-compute the default ACL, and
pre-compute it using (guix pki) directly.
2019-03-10 23:41:33 +01:00
309d87c3aa
services: guix: Allocate build user UIDs in the system range.
...
Until now we were allocating the UIDs of build users above 30000, which
is in "normal" user UID range. This static allocation was unnecessary,
so this change lets the system allocate UIDs in the system range (below
1000).
* gnu/services/base.scm (guix-build-accounts): Remove #:first-uid, and
remove 'uid' field from 'user-account'.
2019-03-10 23:41:33 +01:00
45fef894eb
gnu: gnome-shell: Avoid top-level reference to inkscape.
...
Fixes <https://bugs.gnu.org/34806 >.
Reported by Marius Bakke <mbakke@fastmail.com>.
* gnu/packages/gnome.scm (gnome-shell)[source](snippet): Remove
reference to INKSCAPE. Instead, simply copy the SVG file to
data/theme.
[arguments]: Add 'convert-logo-to-png' phase.
[native-inputs]: Add INKSCAPE.
2019-03-10 23:41:33 +01:00
5ae5932b2f
gnu: ansible: Update to 2.7.8 [fixes CVE-2019-3828].
...
* gnu/packages/admin.scm (ansible): Update to 2.7.8.
2019-03-10 23:00:08 +01:00
7fda7b8fad
gnu: pugixml: Build as shared library.
...
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
2019-03-10 21:44:25 +01:00
e2bdf60982
gnu: FileZilla: Update to 3.41.1.
...
* gnu/packages/ftp.scm (filezilla): Update to 3.41.1.
2019-03-10 21:44:25 +01:00
6324727770
gnu: pugixml is a regular input.
...
* gnu/packages/emulators.scm (mame)[native-inputs]: Move PUGIXML ...
[inputs]: ... here.
* gnu/packages/ftp.scm (filezilla)[native-inputs, inputs]: Likewise.
2019-03-10 21:44:25 +01:00
e44de1d2fb
services: zabbix-front-end: Show location in messages.
...
* gnu/services/monitoring.scm (zabbix-front-end-config): Show location in
messages.
2019-03-10 21:32:38 +03:00
d132d9f96b
services: configuration: Add '%location'.
...
* gnu/services/configuration.scm (define-configuration): Add '%location'.
2019-03-10 21:32:38 +03:00
41ce92501b
gnu: xfd: Update to 1.1.3.
...
* gnu/packages/xorg.scm (xfd): Update to 1.1.3.
2019-03-10 18:30:51 +01:00
06e3ed5d19
gnu: xprop: Update to 1.2.4.
...
* gnu/packages/xorg.scm (xprop): Update to 1.2.4.
2019-03-10 18:30:51 +01:00
df8dbfb30b
gnu: notmuch: Update to 0.28.3.
...
* gnu/packages/mail.scm (notmuch): Update to 0.28.3.
2019-03-10 18:30:51 +01:00
2c0cf9eec7
gnu: xapian: Update to 1.4.11.
...
* gnu/packages/search.scm (xapian, python-xapian-bindings): Update to 1.4.11.
2019-03-10 18:30:51 +01:00
511930c294
gnu: libmspack: Update to 0.10.1.
...
* gnu/packages/compression.scm (libmspack): Update to 0.10.1.
2019-03-10 18:30:50 +01:00
755226e9c2
gnu: python-dask: Update to 1.1.4.
...
* gnu/packages/python-xyz.scm (python-dask): Update to 1.1.4.
2019-03-10 18:30:50 +01:00
f1fff66be5
gnu: elogind: Update to 239.4.
...
* gnu/packages/freedesktop.scm (elogind): Update to 239.4.
2019-03-10 18:30:50 +01:00
6845ab5204
gnu: Import (gnu packages image) in (gnu packages scanner).
...
This is a follow-up to commit 10bd2889d2
2019-03-10 17:12:16 +01:00
10bd2889d2
gnu: sane-backends: Support PNG scanimage output.
...
* gnu/packages/scanner.scm (sane-backends)[inputs]: Add libpng.
2019-03-10 16:33:55 +01:00
ca32afacf9
gnu: Add btanks.
...
* gnu/packages/games.scm (btanks): New variable.
2019-03-10 14:04:28 +01:00
d7764d42e4
gnu: Add libsmpeg-with-sdl1.
...
* gnu/packages/video.scm (libsmpeg-with-sdl1): New variable.
(libsmpeg)[version]: Change to 0.4.5-401.
2019-03-10 14:04:28 +01:00
8ada024ba6
gnu: Add 4dtris.
...
* gnu/packages/games.scm (4dtris): New variable.
2019-03-10 14:04:28 +01:00
c06709b8a4
gnu: Add slingshot.
...
* gnu/packages/games.scm (slingshot): New variable.
2019-03-10 14:04:28 +01:00
05487ed8e6
gnu: scons: Update to 3.0.4.
...
* gnu/packages/python-xyz.scm (scons): Update to 3.0.4.
[arguments]: Remove second instance of "imp.load_module" (bug 34236).
2019-03-10 14:04:28 +01:00
4eb57ca883
gnu: Add opensmtpd-next.
...
* gnu/packages/mail.scm (opensmtpd-next): New public variable.
2019-03-10 13:37:18 +01:00
380384e419
gnu: ibus: Update Unicode data to 12.0.0.
...
* gnu/packages/ibus.scm (ibus)[native-inputs]: Use versioned URLs for
Unicode data and update hashes.
2019-03-10 13:37:18 +01:00
2b613a1a5d
gnu: hyperledger-fabric: Fix description, set supported system and parallel build.
...
* gnu/packages/hyperledger.scm (hyperledger-fabric)[description]: Rephrase
into something less marketing-ish.
[arguments]: Build with multiple jobs.
[supported-systems]: Support x86_64-linux only.
2019-03-09 12:30:24 +01:00
7d4cab7473
gnu: Add openfst.
...
* gnu/packages/machine-learning.scm (openfst): New variable.
2019-03-09 10:43:37 +01:00
983550692d
gnu: Add hyperledger-fabric.
...
* gnu/local.mk (hyperledger): New variable.
2019-03-09 10:15:46 +01:00
373abfb398
gnu: lynis: Update to 2.7.2.
...
* gnu/packages/admin.scm (lynis): Update to 2.7.2.
2019-03-09 02:33:31 +01:00
7b957a3344
gnu: youtube-viewer: Update to "3.5.4.
...
* gnu/packages/video.scm (youtube-viewer): Update to "3.5.4.
2019-03-09 02:33:31 +01:00
37fc44eab9
gnu: dovecot: Avoid unnecessary patching.
...
* gnu/packages/mail.scm (dovecot)[arguments]: Replace ‘pre-configure’
patching with custom ‘make install sysconfdir=…’.
2019-03-09 02:33:31 +01:00
f762e49f28
gnu: dovecot: Indent arguments.
...
* gnu/packages/mail.scm (dovecot)[arguments]: C-M-q and tuck left.
2019-03-09 02:33:31 +01:00
7969751f54
gnu: i3lock-color: Update to 2.12.c.
...
* gnu/packages/wm.scm (i3lock-color): Update to 2.12.c.
[inputs]: Add xcb-util-xrm.
2019-03-09 02:33:30 +01:00
f45cc966ba
gnu: i3lock-color: Don't use unstable tarball.
...
* gnu/packages/wm.scm (i3lock-color)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
a48db08afe
gnu: i3lock-fancy: Don't use unstable tarball.
...
* gnu/packages/wm.scm (i3lock-fancy)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
d429878daf
activation: Shared system home directories are now 555 and root-owned.
...
Fixes <https://bugs.gnu.org/34788 >.
Reported by Jack Hill <jackhill@jackhill.us>.
Regression introduced by the combination of
8bb76f3d44
2019-03-08 23:21:59 +01:00
74c2339fff
gnu: Add java-eclipse-jdt-compiler-apt.
...
* gnu/packages/java.scm (java-eclipse-jdt-compiler-apt): New variable.
2019-03-08 23:18:56 +01:00
8b6acb1f20
gnu: blast+: Update to 2.7.1.
...
* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-08 23:00:07 +01:00
f87dcb4d75
gnu: Add texlive-latex-pdfx.
...
* gnu/packages/tex.scm (texlive-latex-pdfx): New variable.
2019-03-08 21:49:25 +01:00
cafd4d387b
gnu: Add texlive-latex-xmpincl.
...
* gnu/packages/tex.scm (texlive-latex-xmpincl): New variable.
2019-03-08 21:48:19 +01:00
847768b9cc
gnu: Add translate2geda.
...
* gnu/packages/engineering.scm (translate2geda): New variable.
2019-03-08 21:45:29 +01:00
a734da8675
gnu: Add rkrlv2.
...
* gnu/packages/music.scm (rkrlv2): New variable.
2019-03-08 21:02:49 +01:00
eb6ef893e8
gnu: fc-host-tools: Update to 10.
...
* gnu/packages/embedded.scm (fc-host-tools): Update to 10.
[arguments]<:make-flags>: Change INSTBIN to INSTALL_PREFIX.
2019-03-08 19:33:04 +01:00
606c198788
gnu: crawl: Find all the included headers.
...
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
change the path for some headers.
2019-03-08 17:22:29 +02:00
b89284407f
gnu: crawl: Don't assume system architecture.
...
This allows crawl to build on non-Intel architectures.
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
remove x86* specific CFLAGS.
2019-03-08 17:22:29 +02:00
fc7d6bc60d
gnu: crawl: Build with python3-wrapper.
...
* gnu/packages/games.scm (crawl)[native-inputs replace python with
python-wrapper.
[arguments]: Remove custom 'patch-python phase.
2019-03-08 17:22:26 +02:00
fb0aeaacea
gnu: u-boot: Remove openssl input.
...
Fixes <https://bugs.gnu.org/34717 >.
* gnu/packages/bootloaders (u-boot): Remove openssl from native-inputs.
(u-boot-tools): Disable FIT_SIGNATURES in tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-08 12:31:37 +01:00
75f0bda71a
gnu: flatpak: Add more dependencies.
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* gnu/packages/package-management.scm (flatpak)[propagated-inputs]: Add
"glib-networking", "gnupg" and "gsettings-desktop-schemas".
2019-03-08 11:50:56 +01:00
daeb3cd98c
gnu: r-genelendatabase: Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
2019-03-08 09:30:00 +01:00
183b6575e7
gnu: r-mzr: Update to 2.16.2.
...
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2.
[inputs]: Replace "boost" with "boost-for-mysql".
2019-03-08 09:14:01 +01:00
6453d7aecc
gnu: r-gviz: Update to 1.26.5.
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* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.
2019-03-08 09:14:01 +01:00
101dcc29d3
gnu: r-ensembldb: Update to 2.6.7.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.
2019-03-08 09:14:01 +01:00
d3713237c5
gnu: r-annotationhub: Update to 2.14.4.
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* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.
2019-03-08 09:14:01 +01:00
53e7f028ed
gnu: r-rhtslib: Update to 1.14.1.
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* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.
2019-03-08 09:14:01 +01:00
d86b9eca56
gnu: r-genomicfeatures: Update to 1.34.4.
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* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
2019-03-08 09:14:01 +01:00
d493043daf
gnu: r-rtracklayer: Update to 1.42.2.
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* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
2019-03-08 09:14:01 +01:00
57f40dc220
gnu: r-rsamtools: Update to 1.34.1.
...
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
2019-03-08 09:14:00 +01:00
58209b1e21
gnu: r-biocparallel: Update to 1.16.6.
...
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
2019-03-08 09:14:00 +01:00
cd43ae3fd6
gnu: r-variantannotation: Update to 1.28.11.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
2019-03-08 09:14:00 +01:00
fff11bccc6
gnu: r-genomeinfodb: Update to 1.18.2.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
2019-03-08 09:14:00 +01:00
8972989e10
gnu: r-dexseq: Update to 1.28.2.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
2019-03-08 09:14:00 +01:00
792d3ed7eb
gnu: man-pages: Update to 5.00.
...
* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.
2019-03-08 01:35:42 +01:00
13b1fb5c92
gnu: dovecot: Update to 2.3.5.
...
* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.
2019-03-08 01:34:41 +01:00
2fa1a3a808
gnu: dovecot: Don't use NAME in source URI.
...
* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
2019-03-08 01:34:40 +01:00
933dad9156
gnu: Add mruby.
...
* gnu/packages/ruby.scm (mruby): New variable.
2019-03-08 00:07:45 +01:00
20662a3020
gnu: r-ggmap: Update to 3.0.0.
...
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.
2019-03-07 23:52:44 +01:00
8f37f53837
gnu: r-readxl: Update to 1.3.0.
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* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
2019-03-07 23:52:44 +01:00
f544ab3379
gnu: r-sys: Update to 3.0.
...
* gnu/packages/cran.scm (r-sys): Update to 3.0.
2019-03-07 23:52:44 +01:00
790db519f4
gnu: r-servr: Update to 0.13.
...
* gnu/packages/cran.scm (r-servr): Update to 0.13.
2019-03-07 23:52:44 +01:00
e89d54278d
gnu: r-flextable: Update to 0.5.1.
...
* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.
2019-03-07 23:52:44 +01:00
e190d9af6c
gnu: r-proxy: Update to 0.4-23.
...
* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
2019-03-07 23:52:43 +01:00
bef78244de
gnu: r-haven: Update to 2.1.0.
...
* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
2019-03-07 23:52:43 +01:00
59c513422c
gnu: r-emdbook: Update to 1.3.11.
...
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
2019-03-07 23:52:43 +01:00
937e15571c
gnu: r-rmysql: Update to 0.10.17.
...
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.
2019-03-07 23:52:43 +01:00
2170a36c3b
gnu: r-gower: Update to 0.2.0.
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* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.
2019-03-07 23:52:43 +01:00
6e4a9b8365
gnu: r-ggsignif: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
2019-03-07 23:52:43 +01:00
532b359865
gnu: r-jomo: Update to 2.6-7.
...
* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
2019-03-07 23:52:43 +01:00
d2cd541cc7
gnu: r-mice: Update to 3.4.0.
...
* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
2019-03-07 23:52:42 +01:00
22777c8657
gnu: r-xfun: Update to 0.5.
...
* gnu/packages/cran.scm (r-xfun): Update to 0.5.
2019-03-07 23:52:42 +01:00
87bb1b8c9e
gnu: r-metap: Update to 1.1.
...
* gnu/packages/cran.scm (r-metap): Update to 1.1.
2019-03-07 23:52:42 +01:00
d8787b3387
gnu: r-ifultools: Update to 2.0-5.
...
* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
2019-03-07 23:52:42 +01:00
cb40b6eb9b
gnu: r-radiant-data: Update to 0.9.9.
...
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9.
[propagated-inputs]: Add r-stringi; remove r-summarytools.
2019-03-07 23:52:42 +01:00
00fb320392
gnu: r-later: Update to 0.8.0.
...
* gnu/packages/cran.scm (r-later): Update to 0.8.0.
2019-03-07 23:52:42 +01:00
8b2c80b8a3
gnu: r-vim: Update to 4.8.0.
...
* gnu/packages/cran.scm (r-vim): Update to 4.8.0.
[propagated-inputs]: Add r-ranger.
2019-03-07 23:52:42 +01:00
b9b1041324
gnu: r-fnn: Update to 1.1.3.
...
* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.
2019-03-07 23:52:42 +01:00
ea010aa31e
gnu: r-arules: Update to 1.6-3.
...
* gnu/packages/cran.scm (r-arules): Update to 1.6-3.
2019-03-07 23:52:41 +01:00
f5ce1dcce2
gnu: r-zip: Update to 2.0.0.
...
* gnu/packages/cran.scm (r-zip): Update to 2.0.0.
2019-03-07 23:52:41 +01:00
bbe9421174
gnu: r-maptools: Update to 0.9-5.
...
* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.
2019-03-07 23:52:41 +01:00
d3f22f0aea
gnu: r-reticulate: Update to 1.11.1.
...
* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.
2019-03-07 23:52:41 +01:00
fd1a17a522
gnu: r-officer: Update to 0.3.3.
...
* gnu/packages/cran.scm (r-officer): Update to 0.3.3.
[propagated-inputs]: Add r-rlang.
2019-03-07 23:52:41 +01:00
7754557090
gnu: r-prediction: Update to 0.3.6.2.
...
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.
2019-03-07 23:52:41 +01:00
3d5bcae0c2
gnu: r-abjutils: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3.
[propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove
r-plyr.
2019-03-07 23:52:41 +01:00
1007b1b6d2
gnu: r-slam: Update to 0.1-45.
...
* gnu/packages/cran.scm (r-slam): Update to 0.1-45.
2019-03-07 23:52:41 +01:00
a431c38166
gnu: r-hash: Update to 2.2.6.1.
...
* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.
2019-03-07 23:52:40 +01:00
a6a87db8ce
gnu: r-dvmisc: Update to 1.1.3.
...
* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3.
[propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2,
r-mvtnorm, r-pracma, r-purrr, and r-survey.
2019-03-07 23:52:40 +01:00
5093cbdc04
gnu: r-summarytools: Update to 0.9.2.
...
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2.
[propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.
2019-03-07 23:52:40 +01:00
b1f39e8c38
gnu: r-multcomp: Update to 1.4-10.
...
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.
2019-03-07 23:52:40 +01:00
e0f861649c
gnu: r-emmeans: Update to 1.3.3.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3.
[propagated-inputs]: Add r-numderiv.
2019-03-07 23:52:40 +01:00
e2fee46f04
gnu: r-afex: Update to 0.23-0.
...
* gnu/packages/cran.scm (r-afex): Update to 0.23-0.
2019-03-07 23:52:40 +01:00
f18ca07eef
gnu: r-lmertest: Update to 3.1-0.
...
* gnu/packages/cran.scm (r-lmertest): Update to 3.1-0.
2019-03-07 23:52:40 +01:00
91f0b745f6
gnu: r-ks: Update to 1.11.4.
...
* gnu/packages/cran.scm (r-ks): Update to 1.11.4.
[propagated-inputs]: Remove r-misc3d.
2019-03-07 23:52:40 +01:00
0b14b100a2
gnu: r-tidytree: Update to 0.2.4.
...
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.4.
2019-03-07 23:52:39 +01:00
4bc5d45144
gnu: r-bigrquery: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0.
[propagated-inputs]: Add r-bit64.
2019-03-07 23:52:39 +01:00
8a05d17037
gnu: r-gmp: Update to 0.5-13.4.
...
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.
2019-03-07 23:52:39 +01:00
7706a98cda
gnu: r-huge: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-huge): Update to 1.3.0.
[propagated-inputs]: Add r-rcpp and r-rcppeigen; remove r-lattice.
2019-03-07 23:52:39 +01:00
f59cdeaf25
gnu: r-igraph: Update to 1.2.4.
...
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.
2019-03-07 23:52:39 +01:00
ed494a0acd
gnu: r-dplyr: Update to 0.8.0.1.
...
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.0.1.
[native-inputs]: Move r-rcpp and r-bh from here...
[propagated-inputs]: ...to here; remove r-bindrcpp.
2019-03-07 23:52:39 +01:00
6caf80fbaf
gnu: r-lme4: Update to 1.1-21.
...
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21.
[native-inputs]: Move r-rcpp and r-rcppeigen from here...
[propagated-inputs]: ...to here; add r-boot.
2019-03-07 23:52:39 +01:00
34a98f79d7
gnu: r-forcats: Update to 0.4.0.
...
* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0.
[propagated-inputs]: Add r-ellipsis.
2019-03-07 23:52:39 +01:00
6a0a2342dd
gnu: r-r6: Update to 2.4.0.
...
* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.
2019-03-07 23:52:38 +01:00
4b16c00e9a
gnu: r-formatr: Update to 1.6.
...
* gnu/packages/statistics.scm (r-formatr): Update to 1.6.
2019-03-07 23:52:38 +01:00
1f7a76a0c1
gnu: r-evaluate: Update to 0.13.
...
* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.
2019-03-07 23:52:38 +01:00
48a4b775b9
gnu: r-mgcv: Update to 1.8-27.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.
2019-03-07 23:52:38 +01:00
71fe7f9d21
gnu: r-stringi: Update to 1.3.1.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.
2019-03-07 23:52:38 +01:00
605fcf8a23
gnu: r-stringr: Update to 1.4.0.
...
* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.
2019-03-07 23:52:38 +01:00
17abcd521a
gnu: r-ranger: Update to 0.11.2.
...
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.
2019-03-07 23:52:38 +01:00
9066534d4c
gnu: r-openssl: Update to 1.2.2.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.
2019-03-07 23:52:38 +01:00
a1d9387d82
gnu: r-catools: Update to 1.17.1.2.
...
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.
2019-03-07 23:52:37 +01:00
4fadef3ba0
gnu: r-xml: Update to 3.98-1.19.
...
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.
2019-03-07 23:52:37 +01:00
bc7895e1cf
gnu: r-flexmix: Update to 2.3-15.
...
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.
2019-03-07 23:52:37 +01:00
6be62a5a72
gnu: r-irlba: Update to 2.3.3.
...
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.
2019-03-07 23:52:37 +01:00
b22a20405a
gnu: r-registry: Update to 0.5-1.
...
* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.
2019-03-07 23:52:37 +01:00
3db71d065c
gnu: r-r-utils: Update to 2.8.0.
...
* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.
2019-03-07 23:52:37 +01:00
21886e730b
gnu: r-r-rsp: Update to 0.43.1.
...
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.
2019-03-07 23:52:37 +01:00
ed4100dc96
gnu: r-mvtnorm: Update to 1.0-10.
...
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.
2019-03-07 23:52:37 +01:00
ebd37b49f9
gnu: r-tidyr: Update to 0.8.3.
...
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.
2019-03-07 23:52:37 +01:00
84840deb95
gnu: r-purrr: Update to 0.3.1.
...
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.
2019-03-07 23:52:36 +01:00
b58220f599
gnu: r-pbapply: Update to 1.4-0.
...
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.
2019-03-07 23:52:36 +01:00
e51096b2ea
gnu: r-vgam: Update to 1.1-1.
...
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.
2019-03-07 23:52:36 +01:00
aeb11b7549
gnu: r-ggthemes: Update to 4.1.0.
...
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.
2019-03-07 23:52:36 +01:00
d235cf7268
gnu: r-shiny: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-shiny): Update to 1.2.0.
[arguments]: Adjust processing of minified JavaScript.
2019-03-07 23:52:36 +01:00
83ef38b038
gnu: r-epi: Update to 2.35.
...
* gnu/packages/cran.scm (r-epi): Update to 2.35.
2019-03-07 23:52:36 +01:00
75cbc80037
gnu: r-network: Update to 1.14-377.
...
* gnu/packages/cran.scm (r-network): Update to 1.14-377.
[propagated-inputs]: Add r-magrittr and r-tibble.
2019-03-07 23:52:36 +01:00
fadc49c6e5
gnu: r-vegan: Update to 2.5-4.
...
* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.
2019-03-07 23:52:36 +01:00
d1c2fd8eeb
gnu: r-future-apply: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-future-apply): Update to 1.2.0.
2019-03-07 23:52:36 +01:00
6e8b38d3e8
gnu: Add r-furrr.
...
* gnu/packages/cran.scm (r-furrr): New variable.
2019-03-07 23:52:35 +01:00
f0bff69873
gnu: Add r-survey.
...
* gnu/packages/cran.scm (r-survey): New variable.
2019-03-07 23:52:35 +01:00
dab3e92c94
gnu: Add r-magick.
...
* gnu/packages/cran.scm (r-magick): New variable.
2019-03-07 23:52:35 +01:00
3f22a115bd
gnu: Add r-ellipsis.
...
* gnu/packages/cran.scm (r-ellipsis): New variable.
2019-03-07 23:52:35 +01:00
d748cb5f47
gnu: Add autorandr.
...
* gnu/packages/xdisorg.scm (autorandr): New variable.
2019-03-07 22:23:38 +01:00
945723be97
gnu: php: Update to 7.3.3.
...
* gnu/packages/php.scm (php): Update to 7.3.3.
2019-03-07 21:18:30 +01:00
dcf4d01f30
gnu: libmicrohttpd: Enable parallel tests.
...
* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Don't disable
parallel tests.
2019-03-07 22:00:53 +02:00
c4bfce994e
gnu: libmicrohttpd: Update to 0.9.63.
...
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.63.
[arguments]: Remove custom phase to add missing LDFLAGS.
2019-03-07 22:00:53 +02:00
0ef54303f3
gnu: c-graph: Update to 2.0.1.
...
* gnu/packages/maths.scm (c-graph): Update to 2.0.1.
2019-03-07 22:00:52 +02:00
0ae735bcc8
activation: Build account databases with (gnu build accounts).
...
* gnu/build/activation.scm (enumerate, current-users, current-groups)
(add-group, add-user, modify-user, ensure-user): Remove.
(activate-users+groups)[touch, activate-user]: Remove.
[make-home-directory]: New procedure.
Rewrite in terms of 'user+group-databases', 'write-group', etc.
* gnu/build/install.scm (directives): Remove "/root".
* gnu/system/shadow.scm (account-activation): Remove (setenv "PATH" ...)
expression, which is now unneeded.
2019-03-07 20:05:09 +01:00
ec600e4544
Add (gnu build accounts).
...
* gnu/build/accounts.scm, tests/accounts.scm: New files.
* Makefile.am (SCM_TESTS): Add tests/accounts.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
2019-03-07 20:05:09 +01:00
6061d01512
activation: Operate on <user-account> and <user-group> records.
...
* gnu/system/accounts.scm (sexp->user-group, sexp->user-account): New
procedures.
* gnu/system/shadow.scm (account-activation): Call them in the arguments
to 'activate-users+groups'.
(account-shepherd-service): Likewise.
* gnu/build/activation.scm (activate-users+groups): Expect a list of
<user-account> and a list of <user-group>. Replace uses of 'match' on
tuples with calls to record accessors.
(activate-user-home): Likewise.
2019-03-07 20:05:09 +01:00
f6f67b87c0
system: Add (gnu system accounts).
...
The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.
* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
2019-03-07 20:04:02 +01:00
b60e9fb82f
gnu: fuseiso: Fix typo in description.
...
* gnu/packages/linux.scm (fuseiso)[description]: Fix typo.
2019-03-07 17:12:46 +01:00
1e1142d8cb
gnu: Add nullmailer.
...
* gnu/packages/mail.scm (nullmailer): New public variable.
2019-03-07 15:39:46 +01:00
3189fad217
gnu: neovim: Let build phase return #T.
...
* gnu/packages/vim.scm (neovim)[arguments]: Return #T from "patch-tic" phase.
2019-03-07 13:39:45 +01:00
3b296475bf
gnu: cd-hit: Support longer sequences.
...
* gnu/packages/bioinformatics.scm (cd-hit)[arguments]: Pass MAX_SEQ to make
flags.
2019-03-07 13:38:01 +01:00
237ee6f2b2
gnu: python2-fastlmm: Disable tests.
...
* gnu/packages/machine-learning.scm (python2-fastlmm)[arguments]: Disable
tests.
2019-03-07 13:37:58 +01:00
9fd6ad3e35
gnu: wireguard: Update to 0.0.20190227.
...
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190227.
[arguments]: Disable tests.
2019-03-07 12:23:43 +01:00
9cb4bda222
gnu: nftables: Update to 0.9.0.
...
* gnu/packages/linux.scm (nftables): Update to 0.9.0.
[arguments]: Add "--disable-man-doc" configure flag.
2019-03-07 12:08:21 +01:00
ccf2446730
gnu: minetest: Update to 5.0.0.
...
* gnu/packages/games.scm (minetest-data, minetest): Update to 5.0.0.
2019-03-07 05:31:19 -05:00
0a10abf73e
gnu: neovim: Fix #34616 .
...
This fixes a segmentation fault in neovim, where an error return value
is passed in as a pointer.
* gnu/packages/vim.scm (neovim)[arguments](phases): Add 'patch-tic phase.
2019-03-07 11:08:31 +01:00
2702aa9136
gnu: unibilium: Update to 2.0.0.
...
* gnu/packages/terminal.scm (unibilium): Update to 2.0.0.
[native-inputs]: Add perl.
2019-03-07 09:48:03 +01:00
abe6e670d3
gnu: sane-backends-minimal: Fix USB support.
...
* gnu/packages/scanner.scm (sane-backends-minimal)[inputs]: Replace
libusb-compat with libusb.
[arguments]: Disable tests that require USB access.
2019-03-07 02:13:26 +01:00
274fa49100
gnu: linux-libre: Update to 5.0.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.
(%linux-libre-hash): Update hash.
(%linux-libre-4.20-patches): Rename to ...
(%linux-libre-5.0-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Use %linux-libre-5.0-patches instead of %linux-libre-4.20-patches.
* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-03-06 17:51:55 -05:00
9870f3ec61
gnu: linux-libre@4.19: Update to 4.19.27.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.27.
(%linux-libre-4.19-hash): Update hash.
2019-03-06 17:51:12 -05:00
1b1a6c028b
gnu: linux-libre@4.14: Update to 4.14.105.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.105.
(%linux-libre-4.14-hash): Update hash.
2019-03-06 17:50:21 -05:00
7850fa891d
gnu: linux-libre@4.9: Update to 4.9.162.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.162.
2019-03-06 17:49:26 -05:00
fc240e7e05
gnu: synthv1: Update to 0.9.5.
...
* gnu/packages/music.scm (synthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
6ef147bd1d
gnu: drumkv1: Update to 0.9.5.
...
* gnu/packages/music.scm (drumkv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
cf6195906c
gnu: samplv1: Update to 0.9.5.
...
* gnu/packages/music.scm (samplv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
4b159add6f
gnu: padthv1: Update to 0.9.5.
...
* gnu/packages/music.scm (padthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
d935f69b11
gnu: yoshimi: Update to 1.5.10.2.
...
* gnu/packages/music.scm (yoshimi): Update to 1.5.10.2.
2019-03-06 22:26:06 +01:00
01d8a2a3d9
gnu: electron-cash: Update to 3.3.6.
...
* gnu/packages/finance (electron-cash): Update to 3.3.6.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
307603dd88
gnu: electrum: Update to 3.3.4.
...
* gnu/packages/finance (electrum): Update to 3.3.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
11599cff1e
gnu: diffoscope: Update to 113.
...
* gnu/packages/package-management (diffoscope): Update to 113.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-06 22:05:07 +01:00
61e265d294
gnu: Add multitime.
...
* gnu/packages/benchmark.scm (multitime): New variable.
2019-03-06 21:55:14 +01:00
8035819f4c
gnu: r-org-mm-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
2019-03-06 21:43:33 +01:00
d56df35a25
gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
2019-03-06 21:42:39 +01:00
f8780e96ff
gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
2019-03-06 21:41:48 +01:00
3a08940e1a
gnu: r-org-ce-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
2019-03-06 21:35:20 +01:00
7bc5d1b0e1
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.
2019-03-06 21:33:17 +01:00
13dabd6947
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.
2019-03-06 21:31:41 +01:00
0c792ffbd1
gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
2019-03-06 21:30:30 +01:00
b7d93cf508
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
2019-03-06 21:29:20 +01:00
c3adc83054
gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
2019-03-06 21:26:54 +01:00
5acb9052cf
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
2019-03-06 21:25:18 +01:00
fe0b76e215
gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
2019-03-06 21:23:42 +01:00
40a6505711
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.
2019-03-06 21:23:20 +01:00
66e35ce63b
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.
2019-03-06 21:16:33 +01:00
bfb93b4889
gnu: r-geneplotter: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
2019-03-06 21:13:38 +01:00
9f8698ad1c
gnu: Add guile-stis-parser.
...
* gnu/packages/guile-xyz.scm (guile-stis-parser): New variable.
2019-03-06 21:07:49 +01:00
3d13b448e5
gnu: r-copynumber: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
2019-03-06 21:07:49 +01:00
6aa896d82e
gnu: Update copyright headers.
...
This is a follow-up to commit 1fe9a36173
2019-03-06 21:07:49 +01:00
d2b38df62e
gnu: font-gnu-unifont: Update to 12.0.01.
...
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.0.01.
2019-03-06 20:51:47 +02:00
393b55d5c7
gnu: cabextract: Don't use NAME in source URI.
...
* gnu/packages/compression.scm (cabextract)[source]: Hard-code NAME.
2019-03-06 16:48:40 +01:00
bde093c23d
gnu: cabextract: Update to 1.9.1.
...
* gnu/packages/compression.scm (cabextract): Update to 1.9.1.
2019-03-06 16:48:39 +01:00
8fadbc4bb3
gnu: lcov: Update to 1.14.
...
* gnu/packages/code.scm (lcov): Update to 1.14.
2019-03-06 16:48:39 +01:00
7016e62070
gnu: python-mako: Update home page.
...
* gnu/packages/python-xyz.scm (python-mako)[home-page]: Use HTTPS.
2019-03-06 16:30:48 +01:00
dff79364cf
gnu: fuseiso: Fix typo.
...
* gnu/packages/linux.scm (fuseiso)[synopsis]: s/imsages/images.
2019-03-06 16:30:48 +01:00
a9eeda20b4
gnu: valgrind: Add download mirror.
...
* gnu/packages/valgrind.scm (valgrind)[source](uri): Add mirror.
2019-03-06 16:30:48 +01:00
38502a7d13
gnu: bismark: Update to 0.20.1.
...
* gnu/packages/bioinformatics.scm (bismark): Update to 0.20.1.
[source]: Remove obsolete snippet.
[arguments]: Add build phase "replace-plotly.js" and add requried modules;
adjust "install" phase.
[inputs]: Add perl-carp and perl-getopt-long.
[native-inputs]: Add plotly.js and uglify-js.
2019-03-06 16:26:23 +01:00
1564e0fefa
gnu: Add fuseiso.
...
* gnu/packages/linux.scm (fuseiso): New variable.
2019-03-06 16:24:34 +01:00
cb66fb101f
gnu: Add r-scde.
...
* gnu/packages/bioinformatics.scm (r-scde): New variable.
2019-03-06 15:55:54 +01:00
afeb10a056
gnu: Add bowtie1.
...
* gnu/packages/bioinformatics.scm (bowtie1): New variable.
2019-03-06 15:32:45 +01:00
5b8f892872
gnu: octave, octave-cli: Update to 5.1.0.
...
* gnu/packages/maths.scm (octave, octave-cli): Update to 5.1.0.
2019-03-06 09:17:33 -05:00
e366521a94
gnu: crawl, crawl-tiles: Update to 0.23.1.
...
* gnu/packages/games.scm (crawl, crawl-tiles): Update to 0.23.1.
[native-inputs]: Add python and python-pyyaml.
[arguments]: Add 'patch-python' phase, modify the 'check' phase and move the
'check' phase back after the 'build' phase.
2019-03-06 09:17:24 -05:00
5bb674a0cd
gnu: perl-czplib: Fix installation directory.
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* gnu/packages/perl.scm (perl-czplib)[arguments]: Fix installation directory.
2019-03-06 15:05:38 +01:00
5531782d1c
gnu: Add guile-studio.
...
* gnu/packages/guile-xyz.scm (guile-studio): New variable.
2019-03-06 14:40:02 +01:00
4fc9b5b1dd
gnu: Add genrich.
...
* gnu/packages/bioinformatics.scm (genrich): New variable.
2019-03-06 13:28:45 +01:00
1fe9a36173
gnu: r-dnacopy: Remove duplicate definition.
...
Reported by Christopher Baines <mail@cbaines.net>.
* gnu/packages/bioinformatics.scm (r-dnacopy): Remove variable.
2019-03-06 10:39:28 +01:00
3dad6087be
gnu: Add r-org-dr-eg-db.
...
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-06 10:29:25 +01:00
43d6776ba4
gnu: java-eclipse-jdt-core: Update to 3.16.0.
...
* gnu/packages/java.scm (java-eclipse-jdt-core): Update to 3.16.0.
2019-03-06 10:10:23 +01:00
c8427a5e91
gnu: java-eclipse-core-resources: Update to 3.13.200.
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* gnu/packages/java.scm (java-eclipse-core-resources): Update to 3.13.200.
2019-03-06 10:10:23 +01:00
4fa9b6e657
gnu: java-eclipse-core-runtime: Update to 3.15.100.
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* gnu/packages/java.scm (java-eclipse-core-runtime): Update to 3.15.100.
2019-03-06 10:10:23 +01:00
e40e3792e6
gnu: java-eclipse-equinox-common: Update to 3.10.200.
...
* gnu/packages/java.scm (java-eclipse-equinox-common): Update to 3.10.200.
2019-03-06 10:10:19 +01:00
d9eada7917
gnu: shaderc: Update to 2018.0.
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* gnu/packages/vulkan.scm (shaderc): Update to 2018.0.
2019-03-06 09:26:50 +01:00
264c803b82
gnu: spirv-tools: Update to 2019.1.
...
* gnu/packages/vulkan.scm (spirv-tools): Update to 2019.1.
[arguments]: Add 'fixgcc7 phase.
[native-inputs]: Add gcc-7.
2019-03-06 09:26:50 +01:00
9a1de5f0fa
gnu: spirv-headers: Update to commit 8bea0a2.
...
* gnu/packages/vulkan.scm (spirv-headers): Update to commit 8bea0a2.
2019-03-06 09:26:49 +01:00
3113ecfaec
gnu: glslang: Update to 7.11.3113.
...
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3113.
2019-03-06 09:26:49 +01:00
3546e97f38
gnu: MPD: Update to 0.21.5.
...
* gnu/packages/mpd.scm (mpd): Update to 0.21.5.
2019-03-05 21:10:54 -05:00
84eb265eb8
gnu: FFmpeg: Build with AV1 support.
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* gnu/packages/video.scm (ffmpeg)[inputs]: Add libaom.
[arguments]: Pass '--enable-libaom' to #:configure-flags.
(ffmpeg-3.4)[inputs, arguments]: Filter out libaom.
2019-03-05 18:29:20 -05:00
a7afa45401
gnu: Add libaom.
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* gnu/packages/video.scm (libaom): New variable.
Co-authored-by: Leo Famulari <leo@famulari.name>
2019-03-05 18:29:20 -05:00
dbfa3bb5d0
gnu: you-get: Update to 0.4.1256.
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* gnu/packages/video.scm (you-get): Update to 0.4.1256.
2019-03-06 00:15:28 +01:00
fe67e51301
gnu: youtube-dl: Update to 2019.03.01.
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* gnu/packages/video.scm (youtube-dl): Update to 2019.03.01.
2019-03-06 00:15:27 +01:00
84bdd0ec06
gnu: plantuml: Update to 1.2019.2.
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* gnu/packages/uml.scm (plantuml): Update to 1.2019.2.
2019-03-06 00:15:27 +01:00
2830802043
gnu: xinit: Update to 1.4.1.
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* gnu/packages/xorg.scm (xinit): Update to 1.4.1.
2019-03-06 00:15:27 +01:00
2e625ef73a
gnu: lxc: Fix documentation directory.
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* gnu/packages/virtualization.scm (lxc)[arguments]: Set ‘--docdir’ in #:configure-flags.
2019-03-06 00:15:26 +01:00
cc7058b20b
gnu: lxc: Update to 3.1.0.
...
* gnu/packages/virtualization.scm (lxc): Update to 3.1.0.
2019-03-06 00:15:26 +01:00
5f7c036cf6
gnu: dav1d: Update to 0.2.0.
...
* gnu/packages/video.scm (dav1d): Update to 0.2.0.
[source]: Add alternate URL.
2019-03-05 17:56:49 -05:00
5387971a9e
artwork: Update snapshot to b975164.
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* gnu/artwork.scm (%artwork-repository): Update to b975164.
2019-03-05 23:08:53 +01:00
af85757915
gnu: singularity: Leave PATH unchanged.
...
Previously 'singularity help' & co. would all fail on Guix System
because Coreutils, grep, etc. were not found in $PATH.
* gnu/packages/linux.scm (singularity)[source](snippet): Remove "PATH"
setting from 'bin/singularity.in'.
2019-03-05 23:08:53 +01:00
fbf26cbcf3
gnu: singularity: Patch 'Makefile.in' in a snippet.
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* gnu/packages/linux.scm (singularity)[source](snippet, modules): New
fields.
[arguments]: Remove 'disable-install-hook' phase.
2019-03-05 23:08:53 +01:00
107b081ef7
gnu: wpa-supplicant: Add 'cpe-name' property.
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* gnu/packages/admin.scm (wpa-supplicant-minimal)[properties]: New
field.
2019-03-05 23:08:53 +01:00
f4319c6e28
gnu: Syncthing: Update to 1.1.0.
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* gnu/packages/syncthing.scm (syncthing): Update to 1.1.0.
2019-03-05 14:42:49 -05:00
f862697b5c
gnu: emacs-no-x-toolkit: Fix configure flags.
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* gnu/packages/emacs.scm (emacs-no-x-toolkit)[arguments]: Don't lose
custom configure flags.
2019-03-05 21:38:51 +02:00
7e80767dc3
gnu: emacs-disk-usage: Update to 1.3.0.
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* gnu/packages/emacs-xyz.scm (emacs-disk-usage): Update to 1.3.0.
2019-03-05 20:03:20 +01:00
908a3f3614
gnu: thinkfan: Let the build system handle rcscripts/.
...
This moves them from /share/thinkfan to their conventional locations
in /etc and /lib; the former was an arbitrary Guixism anyway.
* gnu/packages/linux.scm (thinkfan)[arguments]:
Re-write 'install-rc-scripts' as 'create-init-scripts' and move it after
the 'unpack' phase.
2019-03-05 17:01:53 +01:00
9a3d176ee1
gnu: thinkfan: Update to 1.0.2.
...
* gnu/packages/linux.scm (thinkfan): Update to 1.0.2.
[arguments]: Adjust source directory.
2019-03-05 17:01:53 +01:00
9eb7cde0e8
gnu: iucode-tool: Update to 2.3.1.
...
* gnu/packages/linux.scm (iucode-tool): Update to 2.3.1.
2019-03-05 17:01:53 +01:00
59ac0a2a59
gnu: f2fs-tools: Update to 1.12.0.
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* gnu/packages/linux.scm (f2fs-tools): Update to 1.12.0.
2019-03-05 17:01:53 +01:00
2d588f3c03
gnu: f2fs-tools: Don't use NAME in source URI.
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* gnu/packages/linux.scm (f2fs-tools-1.7, f2fs-tools)[source]:
Hard-code NAME.
2019-03-05 17:01:52 +01:00
9e6008b775
gnu: xfsprogs: Update to 4.20.0.
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* gnu/packages/linux.scm (xfsprogs): Update to 4.20.0.
2019-03-05 17:01:52 +01:00
e569c7723d
gnu: libnftnl: Update to 1.1.2.
...
* gnu/packages/linux.scm (libnftnl): Update to 1.1.2.
2019-03-05 17:01:52 +01:00
083639a553
gnu: genext2fs: Update to 1.4.1-4.
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* gnu/packages/linux.scm (genext2fs): Update to 1.4.1-4.
[arguments]: Add 'apply-debian-patches' phase.
[native-inputs]: Add autoconf and automake.
2019-03-05 17:01:51 +01:00
f5e08f1793
gnu: wget2: Update to 1.99.1.
...
This fixes https://issues.guix.info/issue/34718 .
* gnu/packages/wget.scm (wget2): Update to 1.99.1.
[arguments]: Add phase to skip network tests. Update custom 'bootstrap
phase to not require unnecessary binaries.
[inputs]: Remove doxygen, python. Move autoconf, automake, flex,
gettext-minimal, libtool ...
[native-inputs]: ... to here. Add python-2.
2019-03-05 17:46:46 +02:00
f347fb79df
linux-modules: module-soft-dependencies: Partition the result and return it as two lists.
...
* gnu/build/linux-modules.scm (module-soft-dependencies): Partition the
result and return it as two lists.
2019-03-05 13:43:34 +01:00
1a3db0b22f
gnu: rust: Update to 1.31.1.
...
* gnu/patches/rust-1.30-gdb-llvm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.29): ...this.
(rust-1.30): New variable.
(rust): New variable.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-05 13:43:09 +01:00
ac5aad535c
gnu: scdoc: Update to 1.9.4.
...
* gnu/packages/man.scm (scdoc): Update to 1.9.4.
2019-03-05 11:49:06 +01:00
df747c8d68
gnu: Add mailcatcher.
...
* gnu/packages/ruby.scm (mailcatcher): New variable.
2019-03-05 11:25:21 +01:00
be6016db4b
gnu: Add ruby-skinny.
...
* gnu/packages/ruby.scm (ruby-skinny): New variable.
2019-03-05 11:22:34 +01:00
6e87695ba4
gnu: Add ruby-thin.
...
* gnu/packages/ruby.scm (ruby-thin): New variable.
2019-03-05 11:22:34 +01:00
3bb094e282
gnu: Add ruby-sinatra.
...
* gnu/packages/ruby.scm (ruby-sinatra): New variable.
2019-03-05 11:22:34 +01:00
acb9e3d8cc
gnu: Add ruby-mustermann.
...
* gnu/packages/ruby.scm (ruby-mustermann): New variable.
2019-03-05 11:22:28 +01:00
3355e49cf8
gnu: ruby-rack-protection: Update to 2.0.5.
...
* gnu/packages/ruby.scm (ruby-rack-protection): Update to 2.0.5.
2019-03-05 10:06:05 +01:00
9c7226dfd5
gnu: python-language-server: Update to 0.24.0.
...
* gnu/packages/python-xyz.scm (python-language-server): Update to 0.24.0.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-04 22:37:02 -05:00
d22d246a25
gnu: btrfs-progs: Update to 4.20.2.
...
* gnu/packages/linux.scm (btrfs-progs): Update to 4.20.2.
2019-03-05 00:05:14 +01:00
d23495fa69
gnu: folks: Update to 0.11.4.
...
* gnu/packages/gnome.scm (folks): Update to 0.11.4.
2019-03-05 00:05:14 +01:00
e5f4796e62
gnu: folks: Don't use NAME in source URI.
...
* gnu/packages/gnome.scm (folks)[source]: Hard-code NAME.
2019-03-05 00:05:13 +01:00
8d6813f98e
gnu: virtualgl: Update to 2.6.1.
...
* gnu/packages/gl.scm (virtualgl): Update to 2.6.1.
2019-03-05 00:05:13 +01:00
77593a444f
gnu: gegl: Update to 0.4.14.
...
* gnu/packages/gimp.scm (gegl): Update to 0.4.14.
2019-03-05 00:05:13 +01:00
bba5bb30dd
gnu: font-anonymous-pro: Use HTTPS home page.
...
* gnu/packages/fonts.scm (font-anonymous-pro)[source, home-page]: Use HTTPS.
2019-03-05 00:05:13 +01:00
76498783ea
gnu: font-fira-code: Update to 1.206.
...
* gnu/packages/fonts.scm (font-fira-code): Update to 1.206.
2019-03-05 00:05:12 +01:00
73c5c4820a
gnu: font-terminus: Update to 4.47.
...
* gnu/packages/fonts.scm (font-terminus): Update to 4.47. Re-indent.
[native-inputs]: Replace perl with python. Order alphabetically.
[arguments]: Remove #:configure-flags.
2019-03-05 00:05:12 +01:00
2d8e1e286d
gnu: font-wqy-zenhei: Remove redundant FILE-NAME.
...
* gnu/packages/fonts.scm (font-wqy-zenhei)[source]: Remove FILE-NAME field.
2019-03-05 00:05:12 +01:00
78cda0bca5
gnu: font-wqy-zenhei: Use HTTPS home page.
...
* gnu/packages/fonts.scm (font-wqy-zenhei)[home-page]: Use HTTPS.
2019-03-05 00:05:11 +01:00
f0736d4795
gnu: go-github.com-jtolds-gls: Update to 4.20.
...
* gnu/packages/golang.scm (go-github.com-jtolds-gls): Update to 4.20.
2019-03-04 17:04:42 -05:00
e31f3cd57c
gnu: Add perl-data-dumper.
...
* gnu/packages/perl.scm (perl-data-dumper): New variable.
2019-03-04 23:02:12 +01:00
84b226c27e
gnu: java-eclipse-jdt-core: Include resources.
...
* gnu/packages/java.scm (java-eclipse-jdt-core)[arguments]: Add build phases
"copy-resources" and "move-sources".
2019-03-04 23:02:12 +01:00
5ae458befc
gnu: rocksdb: Update to 5.18.3.
...
* gnu/packages/databases.scm (rocksdb): Update to 5.18.3.
2019-03-04 22:20:08 +01:00
6a7ef08aa9
gnu: liblo: Update to 0.30.
...
* gnu/packages/audio.scm (liblo): Update to 0.30.
2019-03-04 22:20:08 +01:00
248f651e77
gnu: xorg-server: Update to 1.20.4.
...
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.4.
(xorg-server-for-tests): Stay on version 1.20.3.
2019-03-04 22:20:07 +01:00
cb505b27eb
gnu: xorg-server: Don't use NAME in source URI.
...
* gnu/packages/xorg.scm (xorg-server)[source](uri): Hard-code NAME.
2019-03-04 22:20:07 +01:00
b95d758b33
gnu: pootle: Update to 2.8.2.
...
* gnu/packages/django.scm (pootle): Update to 2.8.2.
2019-03-04 21:52:45 +01:00
add6635281
gnu: python-django-allauth: Update to 0.39.1.
...
* gnu/packages/django.scm (python-django-allauth): Update to 0.39.1.
2019-03-04 21:52:43 +01:00
9597c55005
gnu: python2-openid: Fix package.
...
* gnu/packages/python-web (python2-openid)[arguments]: Disable tests.
2019-03-04 21:52:41 +01:00
1396837184
gnu: python-django-rq: Update to 1.3.0.
...
* gnu/packages/django.scm (python-django-rq): Update to 1.3.0.
2019-03-04 21:52:38 +01:00
f55fe42b36
gnu: python-django-redis: Update to 4.10.0.
...
* gnu/packages/django.scm (python-django-redis): Update to 4.10.0.
2019-03-04 21:52:36 +01:00
865c76ea3b
gnu: python-rq: Update to 0.13.0.
...
* gnu/packages/databases.scm (python-rq): Update to 0.13.0.
2019-03-04 21:52:33 +01:00
dcbe674c86
gnu: python-redis: Update to 3.2.0.
...
* gnu/packages/databases.scm (python-redis): Update to 3.2.0.
2019-03-04 21:52:17 +01:00
bcbb3cc907
gnu: Add ruby-tilt.
...
* gnu/packages/ruby.scm (ruby-tilt): New variable.
2019-03-04 20:33:22 +00:00
8ea991e3af
gnu: Add ruby-haml.
...
* gnu/packages/ruby.scm (ruby-haml): New variable.
2019-03-04 20:33:22 +00:00
09e2b0af40
gnu: Add ruby-temple.
...
* gnu/packages/ruby.scm (ruby-temple): New variable.
2019-03-04 20:33:22 +00:00
76b732fbc3
gnu: Add ruby-markaby.
...
* gnu/packages/ruby.scm (ruby-markaby): New variable.
2019-03-04 20:33:21 +00:00
9efc888d97
gnu: Add ruby-sassc.
...
* gnu/packages/ruby.scm (ruby-sassc): New variable.
2019-03-04 20:33:21 +00:00
8c15015779
gnu: sassc: Update and improve the package.
...
Now that libsass is packaged, change the sassc package to build a dynamically
linked binary. Also update the version, and change the source to the Git
repository, rather than the archives from GitHub.
* gnu/packages/web.scm (sassc): Update to 3.5.0.
[source]: Change to the Git repository.
[arguments]: Tweak to link against libsass.
2019-03-04 20:33:21 +00:00
7fe1be1879
gnu: Add libsass.
...
* gnu/packages/web.scm (libsass): New variable.
2019-03-04 20:33:21 +00:00
450a3f7f2b
gnu: Add ruby-minitest-around.
...
* gnu/packages/ruby.scm (ruby-minitest-around): New variable.
2019-03-04 20:33:21 +00:00
93dc8684cf
gnu: Add ruby-test-construct.
...
* gnu/packages/ruby.scm (ruby-test-construct): New variable.
2019-03-04 20:33:21 +00:00
d6084cdb12
gnu: Add ruby-omniauth-oauth2.
...
* gnu/packages/ruby.scm (ruby-omniauth-oauth2): New variable.
2019-03-04 20:33:21 +00:00
ad6471d415
gnu: Add ruby-with-advisory-lock.
...
* gnu/packages/rails.scm (ruby-with-advisory-lock): New variable.
2019-03-04 20:33:20 +00:00
e42eecdb78
gnu: Add ruby-warden-oauth2.
...
* gnu/packages/ruby.scm (ruby-warden-oauth2): New variable.
2019-03-04 20:33:20 +00:00
e32c99d23e
gnu: Add ruby-warden.
...
* gnu/packages/ruby.scm (ruby-warden): New variable.
2019-03-04 20:33:20 +00:00
29dc48231d
gnu: Add ruby-omniauth.
...
* gnu/packags/ruby.scm (ruby-omniauth): New variable.
2019-03-04 20:33:20 +00:00
92b3750059
gnu: Add ruby-oauth2.
...
* gnu/packages/ruby.scm (ruby-oauth2): New variable.
2019-03-04 20:33:20 +00:00
ca914b5bb1
gnu: Add ruby-multi-xml.
...
* gnu/packages/ruby.scm (ruby-multi-xml): New variable.
2019-03-04 20:33:20 +00:00
2a8581ac38
gnu: Add ruby-jwt.
...
* gnu/packages/ruby.scm (ruby-jwt): New variable.
2019-03-04 20:33:20 +00:00
2a9ce5cb3e
gnu: Add ruby-rbnacl.
...
* gnu/packages/ruby.scm (ruby-rbnacl): New variable.
2019-03-04 20:33:20 +00:00
Tobias Geerinckx-Rice