Commit Graph

3895 Commits

Author SHA1 Message Date
Efraim Flashner c39491829a
scripts: refresh: Allow searching recursively.
* guix/scripts/refresh.scm (refresh-recursive, list-transitive): New
procedures.
(show-help): Document it.
(guix-refresh): Add flags and checks for new options.
* doc/guix.texi (Invoking guix refresh): Document new options.
2018-12-24 12:19:17 +02:00
Arun Isaac 0865d8a8f6
guix: lint: Check for source URIs redirecting to GitHub.
* guix/scripts/lint.scm (check-github-uri): New procedure.
(%checkers): Add it.
* doc/guix.texi (Invoking guix lint): Document it.
* tests/lint.scm ("github-url", "github-url: one suggestion"): New tests.
2018-12-24 08:15:17 +05:30
Ludovic Courtès 62b845c5e2
offload: Display the normalized load in 'guix offload status' output.
Fixes a regression introduced in
bbe66a530a whereby the actual
load (non-normalized) would be displayed.

* guix/scripts/offload.scm (check-machine-status): Add call to
'normalized-load'.
2018-12-23 22:14:15 +01:00
Ludovic Courtès bdf860c2e9
database: Use "write-ahead log" mode and set a long "busy timeout".
This should avoid "database is locked" errors when there's a lot of
concurrency, for instance when offloading simultaneously a lot of
builds.

* guix/store/database.scm (call-with-database): Add two 'sqlite-exec'
calls to set 'journal_mode' and 'busy_timeout'.
2018-12-21 23:50:13 +01:00
Ludovic Courtès b96e05aefd
offload: Recognize build failures due to lack of disk space.
Previously, if a remote build would fail due to lack of disk space, this
would be considered a permanent failure and thus cached as a build
failure if the local daemon runs with '--cache-failures'.

* guix/scripts/offload.scm (transfer-and-offload): Upon
'nix-protocol-error?' call 'node-free-disk-space' and return 1 instead
of 100 if the result if lower than 10 MiB.
2018-12-21 23:50:13 +01:00
Ludovic Courtès 63b0c3eacc
offload: Skip machines that are low on disk space.
Fixes <https://bugs.gnu.org/33378>.

* guix/scripts/offload.scm (node-free-disk-space): New procedure.
(%minimum-disk-space): New variable.
(choose-build-machine): Call 'node-free-disk-space' and take it into
account in addition to LOAD.
(check-machine-status): Display the free disk space.
2018-12-21 23:50:13 +01:00
Ludovic Courtès bbe66a530a
offload: Decompose 'machine-load' into simpler procedures.
* guix/scripts/offload.scm (machine-load): Remove.
(node-load, normalized-load): New procedures.
(choose-build-machine): Call 'open-ssh-session' and 'make-node' from
here; pass the node to 'node-load'.
(check-machine-status): Use 'node-load' instead of 'machine-load'.  Call
'disconnect!' on SESSION.
2018-12-21 23:50:13 +01:00
Ricardo Wurmus 10a1cacb16
import: cran: Try import via CRAN if package is not on Bioconductor.
* guix/import/cran.scm (fetch-description): Return #F on failure.
(cran->guix-package): Retry from CRAN on failure to fetch description from
bioconductor.
2018-12-20 09:42:22 +01:00
Ludovic Courtès 40cc850aeb
download: 'built-in-builders*' relies on the functional cache.
The previous caching strategy, which used STORE as an 'eq?' key, would
no longer work when the functional cache is used because subsequent
store values are not 'eq?'.

* guix/download.scm (built-in-builders*): Rewrite in terms of
'mcached'.
2018-12-19 23:52:25 +01:00
Ludovic Courtès 87b711d200
utils: Memoize 'absolute-dirname'.
* guix/utils.scm (absolute-dirname): Wrap in 'mlambda'.
2018-12-19 23:52:25 +01:00
Ludovic Courtès 0b1be8fd57
packages: Turn 'cache!' into a single-value-return cache.
* guix/packages.scm (cache!): Assume THUNK returns a single value.
(cached): Likewise.
2018-12-19 23:52:24 +01:00
Ludovic Courtès b334674fe5
Use 'mapm' instead of 'sequence' + 'map'.
Previously we'd use the (sequence M (map P L)) idiom just because 'mapm'
was slower (not specialized for the given monad).  This is no longer the
case since commit dcb95c1fc9.

* guix/gexp.scm (lower-inputs): Use (mapm M P L) instead of (sequence
M (map P L)).
(lower-references, gexp->sexp, imported-files): Likewise.
* guix/profiles.scm (profile-derivation): Likewise.
* guix/scripts/environment.scm (inputs->requisites): Likewise.
* guix/scripts/system.scm (copy-closure): Likewise.
2018-12-19 23:52:24 +01:00
Ludovic Courtès 73b0ebdd5e
store: Add 'GUIX_PROFILING' support for the object cache.
* guix/store.scm (profiled?): New procedure.
(record-operation): Use it.
(record-cache-lookup!): New procedure.
(lookup-cached-object): Use it.
2018-12-19 23:52:24 +01:00
Ricardo Wurmus 80eebee9f7
ui: Report profile hooks separately.
* guix/ui.scm (profile-hook-derivation?): New procedure.
(show-what-to-build): Distinguish among BUILD derivations that match
'profile-hook-derivation?'.  Report them separately.
* guix/status.scm (hook-message): New procedure.
(print-build-event): Display profile hooks with readable hook name.
* guix/profiles.scm (info-dir-file, ghc-package-cache-file,
ca-certificate-bundle, glib-schemas, gtk-icon-themes, gtk-im-modules,
xdg-desktop-database, xdg-mime-database, fonts-dir-file, manual-database):
Augment derivation with "type" and "hook" properties.
2018-12-19 23:46:38 +01:00
Julien Lepiller 6e8986c838
build: Add dune-build-system.
* guix/build/dune-build-system.scm,
  guix/build-system/dune.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document dune-build-system.
* guix/build-system/ocaml.scm (lower, default-findlib, default-ocaml): Export
them.
(package-with-explicit-ocaml): Also transform packages built with
dune-build-system.
2018-12-18 22:16:23 +01:00
swedebugia bd5a81f9b8
guix system: Clarify the three strategies available.
* guix/scripts/system.scm (show-help): Clarify the three choices.
* doc/guix.texi (Invoking guix system): Add 3 @cindex to make on-error=strategy
easier to find.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-12-18 16:04:25 +01:00
Timothy Sample 6616a35202
ui: Report file names in 'system-error' exceptions from 'execlp'.
Fixes <https://bugs.gnu.org/33755>.

* guix/ui.scm (apply-formals): New macro.
(execlp): New error-reporting wrapper.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-12-18 16:04:25 +01:00
Ludovic Courtès 9b9de08477
publish: Add a 'Cache-Control' header on /nar responses.
Fixes <https://bugs.gnu.org/33721>.
Reported by Chris Marusich <cmmarusich@gmail.com>.

* guix/scripts/publish.scm (render-nar/cached): Add #:ttl and honor it.
(make-request-handler): Pass #:ttl to 'render-nar/cached'.
* tests/publish.scm ("with cache, uncompressed"): Pass "--ttl=42h" to
'guix publish'.  Check 'Cache-Control' on narinfo response and on nar
response.
2018-12-17 23:33:42 +01:00
Ludovic Courtès a93c160631
environment: Support package transformation options.
Fixes <https://bugs.gnu.org/33776>.
Reported by Adrien Guilbaud <adrien.guilbaud@inria.fr>.

* guix/scripts/environment.scm (show-help): Add call to
'show-transformation-options-help'.
(%options): Add %TRANSFORMATION-OPTIONS.
(options/resolve-packages): Add 'store' parameter.
[transform, package->manifest-entry*]: New procedures.
Use 'package->manifest-entry*' instead of 'package->manifest-entry'.
(guix-environment): Move definition of 'manifest' within 'with-store'.
* tests/guix-environment.sh: Add test.
2018-12-17 23:33:42 +01:00
Julien Lepiller cce654fabd
import: Update opam importer.
* guix/import/opam.scm: Update importer for opam 2.
* tests/opam.scm: Update tests for the opam 2 importer.
2018-12-17 21:43:51 +01:00
Ludovic Courtès adb158b739
deduplication: Gracefully handle ENOSPC raised by 'link' calls.
Reported by Andreas Enge <andreas@enge.fr>
in <https://bugs.gnu.org/33676>.

* guix/store/deduplication.scm (replace-with-link): Catch ENOSPC around
'get-temp-link'.  Do nothing when 'get-temp-link' throws ENOSPC.  Move
code to restore PARENT's permissions outside of 'catch'.
* tests/store-deduplication.scm ("deduplicate, ENOSPC"): New test.
2018-12-14 12:07:24 +01:00
Ludovic Courtès 60b04024f8
substitute: Ignore irrelevant narinfo signatures.
Fixes <https://bugs.gnu.org/33733>.

Fixes a bug whereby 'guix substitute' would accept narinfos whose
signature does not cover the StorePath/NarHash/References tuple.

* guix/scripts/substitute.scm (narinfo-sha256)[%mandatory-fields]: New
variable.
Compute SIGNED-FIELDS; return #f unless each of the %MANDATORY-FIELDS
is among SIGNED-FIELDS.
 * tests/substitute.scm ("query narinfo with signature over nothing")
("query narinfo with signature over irrelevant bits"): New tests.
2018-12-14 00:02:59 +01:00
Eric Bavier cba7ddcf60
refresh: Account for overlapping updater coverage.
* guix/scripts/refresh.scm (list-updaters-and-exit): Do not assume updater
predicates are disjoint.  Track covered packages directly.
2018-12-10 19:59:01 -06:00
Ricardo Wurmus af12790bdd
guix: Add support for channel dependencies.
* guix/channels.scm (<channel-metadata>): New record.
(read-channel-metadata, channel-instance-dependencies): New procedures.
(latest-channel-instances): Include channel dependencies; add optional
argument PREVIOUS-CHANNELS.
(channel-instance-derivations): Build derivation for additional channels and
add it as dependency to the channel instance derivation.
* doc/guix.texi (Channels): Add subsection "Declaring Channel Dependencies".
* tests/channels.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
2018-12-09 13:55:22 +01:00
Ludovic Courtès 6ddc63e599
guix system: Fix bootloader config file generation by 'guix system roll-back'.
Fixes <https://bugs.gnu.org/33623>.
Reported by Diego Nicola Barbato <dnbarbato@posteo.de>.

Regression introduced in commit
46c296dcc4.

* guix/scripts/system.scm (reinstall-bootloader): Add call to
'lower-object'.
2018-12-07 15:14:12 +01:00
Ludovic Courtès ed9c8eb4e5
describe: In 'channels' format, quote the channel name.
Fixes a regression introduced in
commit 8548f99549.

* guix/scripts/describe.scm (channel->sexp): Quote the channel name.
2018-12-07 15:14:12 +01:00
Ludovic Courtès 7bc5657f84
grafts: Mark as non substitutable.
* guix/grafts.scm (graft-derivation/shallow): Pass #:substitutable? to
'build-expression->derivation'.
2018-12-04 10:57:56 +01:00
Ludovic Courtès 9300e2e893
refresh: '--list-dependents' ignores deprecated packages.
* guix/scripts/refresh.scm (all-packages): Filter out deprecated packages.
2018-12-04 10:57:56 +01:00
Ludovic Courtès 0a5fa004f7
build: Default to https://ci.guix.info for substitutes.
* config-daemon.ac (guix_substitute_urls): Always default to
"https://ci.guix.info".
* doc/guix.texi (SUBSTITUTE-SERVER): Switch to ci.guix.info.
* guix/scripts/build.scm (%default-log-urls): Likewise.
* guix/scripts/substitute.scm (%default-substitute-urls): Likewise.
* guix/store.scm (%default-substitute-urls): Likewise.
2018-12-04 10:57:56 +01:00
Ludovic Courtès 0bc02becca
Remove most references to hydra.gnu.org.
* Makefile.am (assert-binaries-available): Don't mention hydra.gnu.org
in comment.
* build-aux/check-available-binaries.scm: Likewise.
* build-aux/check-final-inputs-self-contained.scm: Likewise.
* doc/guix.texi (SUBSTITUTE-SERVER): New variable.
Use it throughout instead of "mirror.hydra.gnu.org".
* doc/contributing.texi (Submitting Patches): Likewise.
* gnu/services/base.scm (hydra-key-authorization)
(guix-activation): Remove mentions of "hydra.gnu.org" in comments and
messages.
* gnu/system/install.scm (%installation-services): Likewise.
* guix/scripts/size.scm (guix-size): Likewise.
2018-12-04 10:57:56 +01:00
Ludovic Courtès 6a837b6062
etc: Add "ci.guix.info.pub" public key file.
* etc/substitutes/ci.guix.info.pub: New file.
* Makefile.am (dist_pkgdata_DATA): Add it.
* guix/self.scm (miscellaneous-files): Add
"share/guix/ci.guix.info.pub".
2018-12-04 10:57:56 +01:00
Björn Höfling b8ca5b3146
hg-fetch: Remove .hg directories of sub-repositories.
* guix/build/hg.scm (hg-fetch): Remove all .hg directories recursively.
2018-12-03 12:29:08 +01:00
Ludovic Courtès 194451347d
Merge branch 'core-updates' 2018-12-03 08:52:17 +01:00
Oleg Pykhalov 37c6f11f8d
repl: Load user's initialization file.
* guix/scripts/repl.scm (guix-repl): Load user's initialization file.
2018-12-03 08:04:51 +03:00
Ludovic Courtès 2d33776050
self: Provide UTF-8 locales when building the manual.
Fixes <https://bugs.gnu.org/33580>.
Reported by <znavko@tutanota.com>.

* guix/self.scm (info-manual)[glibc-utf8-locales]: New variable.
[build]: Add call to 'setenv' for "GUIX_LOCPATH".
2018-12-02 22:53:22 +01:00
Ludovic Courtès a3d77c51bc
git: Nicely report '--with-commit' errors.
* guix/git.scm (latest-repository-commit*): Rewrite to catch
'git-error'.
* po/guix/POTFILES.in: Add guix/git.scm.
* tests/guix-build-branch.sh: Test --with-commit errors.
2018-11-30 17:03:04 +01:00
Ludovic Courtès b18f7234aa
guix build: Add '--with-commit'.
* guix/git.scm (<git-checkout>)[commit]: New field.
(git-checkout-compiler): Honor it.
* guix/scripts/build.scm (evaluate-git-replacement-specs): Add 'proc'
parameter and honor it.
(transform-package-source-branch)[replace]: New procedure.
Adjust 'evaluate-git-replacement-specs' accordingly.
(transform-package-source-commit): New procedure.
(%transformations, %transformation-options)
(show-transformation-options-help): Add 'with-commit'.
* tests/guix-build-branch.sh: Add test.
* doc/guix.texi (Package Transformation Options): Document it.
2018-11-30 17:03:04 +01:00
Ludovic Courtès 96915a448c
guix build: Add '--with-branch' transformation option.
* guix/scripts/build.scm (evaluate-git-replacement-specs)
(transform-package-source-branch): New procedures.
(%transformations, %transformation-options): Add 'with-branch'.
(show-transformation-options-help): Likewise.
* tests/guix-build-branch.sh: New file.
* Makefile.am (SH_TESTS): Add it.
* doc/guix.texi (Package Transformation Options): Document it.
2018-11-30 17:03:04 +01:00
Ludovic Courtès 49ae3f6d89
git: Add <git-checkout> record type.
* guix/git.scm (<git-checkout>): New record type.
(latest-repository-commit*): New procedure.
(git-checkout-compiler): New gexp compiler.
2018-11-30 17:03:04 +01:00
Ludovic Courtès 35cb37ea9c
git: 'latest-repository-commit' logs its progress.
* guix/git.scm (latest-repository-commit): Add #:log-port and honor it.
2018-11-30 17:03:03 +01:00
Marius Bakke 25ca46985c
Merge branch 'master' into core-updates 2018-11-29 15:56:49 +01:00
Ludovic Courtès d09ce3f91b
docker: Hide scary-looking but harmless tar failure messages.
* guix/docker.scm (build-docker-image): Wrap "tar --delete" invocation
in 'with-error-to-port'.
2018-11-29 09:30:00 +01:00
Ludovic Courtès 13bcc6b45f
download: Add berlin.guixsd.org as a content-addressed mirror.
* guix/download.scm (%content-addressed-mirrors)[guix-publish]: New
procedure.
Use it for "mirror.hydra.gnu.org" and add "berlin.guixsd.org" too.
2018-11-28 22:25:34 +01:00
Ludovic Courtès a52ae1b662
download: Make (guix base16) a soft dependency.
Fixes <https://bugs.gnu.org/33542>.
Reported by Mark H Weaver <mhw@netris.org>.

* guix/download.scm (%content-addressed-mirrors): Autoload (guix base16).
2018-11-28 22:25:34 +01:00
Tim Gesthuizen e91152e9f2
guix hash: Fix version and help messages
ca71942445 changes the name of the executable to
be displayed by the --version and --help commands of `guix hash` to
"gcrypt hash".
This is reverted by this commit.

* guix/scripts/hash.scm (show-help): Change string literals

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-28 10:39:58 +01:00
Ludovic Courtès fe5db4eb03
channels: Add 'checkout->channel-instance'.
* guix/channels.scm (checkout->channel-instance): New procedure.
2018-11-28 10:39:58 +01:00
Ludovic Courtès 94c0e61fe7
inferior: Add 'inferior-eval-with-store'.
* guix/inferior.scm (inferior-eval-with-store): New procedure, with code
formerly in 'inferior-package-derivation'.
(inferior-package-derivation): Rewrite in terms of
'inferior-eval-with-store'.
* tests/inferior.scm ("inferior-eval-with-store"): New test.
2018-11-28 10:39:58 +01:00
Ludovic Courtès d4aa147eec
ui: 'show-what-to-build' reports grafts separately.
* guix/ui.scm (graft-derivation?): New procedure.
(show-what-to-build): Distinguish among BUILD derivations that match
'graft-derivation?'.  Report them separately.
2018-11-28 10:39:58 +01:00
Ludovic Courtès af1f1c38fb
status: Report grafting derivations specially.
* guix/status.scm (print-build-event): In 'build-started' event handler,
check the properties of DRV and handle 'graft' derivations specially.
2018-11-28 10:39:58 +01:00
Ludovic Courtès 64fd1c01bc
grafts: Record metadata as derivation properties.
* guix/grafts.scm (graft-derivation/shallow): Pass #:properties to
'build-expression->derivation'.
* tests/grafts.scm ("graft-derivation, grafted item is a direct
dependency"): Check the value returned by 'derivation-properties'.
2018-11-28 10:39:58 +01:00
Ludovic Courtès 8856f409d1
derivations: Add properties.
* guix/derivations.scm (derivation): Add #:properties parameter.
[user+system-env-vars]: Honor it.
(derivation-properties): New procedure.
(build-expression->derivation): Add #:properties and pass it to
'derivation'.
* guix/gexp.scm (gexp->derivation): Likewise.
* tests/derivations.scm ("derivation-properties"): New test.
* tests/gexp.scm ("gexp->derivation properties"): New test.
* doc/guix.texi (Derivations, G-Expressions): Adjust accordingly.
2018-11-28 10:39:58 +01:00
Efraim Flashner db08ea4087
pack: List the available formats.
* guix/scripts/pack.scm (show-formats): New variable.
(%options, show-help): Add 'list-formats' option.
2018-11-27 19:23:39 +02:00
Oleg Pykhalov 01262f1ece
describe: Delete 'directory' argument from 'display-checkout-info'.
This commit follows 1255400faa.

* guix/scripts/describe.scm (display-checkout-info): Delete 'directory'
argument.
2018-11-27 20:09:03 +03:00
Ludovic Courtès ee6b3bb60d
swh: Export 'save-origin' and related bindings.
* guix/swh.scm: Export bindings related to 'save-origin'.
2018-11-27 12:12:33 +01:00
Oleg Pykhalov 3133d678a8
repl: Do not exit repl on SIGINT.
* guix/scripts/repl.scm (guix-repl): Do not exit repl on SIGINT.
2018-11-26 15:08:05 +03:00
Ludovic Courtès 608d3dca89
git-download: Download from Software Heritage as a last resort.
* guix/git-download.scm (git-fetch)[inputs]: Add gzip and tar when
'git-reference-recursive?' is false.
[guile-json, gnutls]: New variables.
[modules]: Add (guix swh).
[build]: Wrap in 'with-extensions'.  Add call to 'swh-download'.
2018-11-26 11:10:20 +01:00
Ludovic Courtès de2bfe9029
Add (guix swh).
* guix/swh.scm: New file.
* Makefile.am (MODULES): Add it.
2018-11-26 11:10:20 +01:00
Ludovic Courtès 3b5829bbcb
git-download: Use 'git-minimal' instead of 'git'.
* guix/git-download.scm (git-package): Refer to 'git-minimal'.
2018-11-26 11:10:20 +01:00
Ludovic Courtès 63fd9f084a
ssh: Make 'send-files' more robust.
Possibly fixes <https://bugs.gnu.org/33239>.

* guix/ssh.scm (send-files): Call 'channel-get-exit-status' only when
RESULT is true.
2018-11-24 19:52:16 +01:00
Marius Bakke 4820b75de0
Merge branch 'master' into core-updates 2018-11-24 19:44:05 +01:00
Jelle Licht 3fe6fcc45f
build-system: clojure-build-system: Fix %default-clojure location.
* guix/build-system/clojure.scm (%default-clojure): Use new package path.
2018-11-24 16:25:55 +01:00
Marius Bakke 4d8f4a3f00
Merge branch 'master' into core-updates 2018-11-24 01:58:18 +01:00
Ludovic Courtès 08f410834b
pack: Add '--profile-name'.
* guix/scripts/pack.scm (self-contained-tarball): Add #:profile-name and
honor it.
(squashfs-image, docker-image): Add #:profile-name.
(%default-options): Add 'profile-name'.
(%options, show-help): Add "--profile-name".
(guix-pack): Honor it.
* tests/guix-pack-localstatedir.sh: New file.
* Makefile.am (SH_TESTS): Add it.
* doc/guix.texi (Invoking guix pack): Document "--profile-name".
2018-11-23 15:42:01 +01:00
Ludovic Courtès 694e638e78
status: Display 'build-remote' events.
* guix/status.scm (print-build-event): Add clause for 'build-remote'.
2018-11-23 15:42:00 +01:00
Ludovic Courtès 60e1c1099f
Update Guile-SQLite3 URL everywhere.
* README: Update Guile-SQLite3 URL.
* doc/guix.texi (Requirements): Likewise.
* guix/store/database.scm (sqlite-exec): Likewise.
* m4/guix.m4 (GUIX_CHECK_GUILE_SQLITE3): Likewise.
2018-11-23 15:42:00 +01:00
Oleg Pykhalov 85e9c4b919
describe: Add recutils format.
* guix/scripts/describe.scm (channel->recutils): New procedure.
(display-checkout-info, display-profile-info): Use this.
(%options): Add 'recutils' option.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-22 21:17:55 +03:00
Oleg Pykhalov 81a40ee0cb
describe: Add json format.
* guix/scripts/describe.scm (channel->json): New procedure.
(display-checkout-info, display-profile-info): Use this.
(%options): Add 'json' option.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-22 21:17:54 +03:00
Oleg Pykhalov 8548f99549
describe: Use a procedure to format output.
* guix/scripts/describe.scm (channel->sexp): New procedure.
(display-checkout-info, display-profile-info): Use this.
2018-11-22 21:17:38 +03:00
Marius Bakke ec8130eb23
Merge branch 'master' into core-updates 2018-11-22 00:10:44 +01:00
Ludovic Courtès a29ce1f97d
guix system: Fix 'init' again.
Fixes a regression introduced in
52ee4479ef, whereby 'install' would now be
passed a procedure instead of a lowerable object.

* guix/scripts/system.scm (perform-action): Pass BOOTLOADER-SCRIPT as
the #:bootloader-installer argument of 'install'.
2018-11-21 23:26:58 +01:00
Efraim Flashner 9cf4ff199c
Merge remote-tracking branch 'origin/master' into core-updates 2018-11-21 19:41:43 +02:00
Oleg Pykhalov 1255400faa
describe: Add profile option.
* guix/scripts/describe.scm (%options): Add profile option.
(show-help): Document this.
(display-checkout-info): Check for profile argument.
* doc/guix.texi (Invoking guix describe): Document this.
2018-11-21 14:41:13 +03:00
Oleg Pykhalov 3dd28aa37c
describe: Fix 'format' option.
Fix ‘guix describe’ ignores ‘--format=FORMAT’ option.

* guix/scripts/describe.scm (%options): Fix 'format' option.
2018-11-21 14:41:13 +03:00
Ludovic Courtès 40bbcaa65d
lint: 'check-derivation' fully disables grafts.
Previously grafting could take place indirectly, for instance when
lowering origins.

* guix/scripts/lint.scm (check-derivation)[try]: Parameterize
'%graft?'.
2018-11-20 18:36:05 +01:00
Ludovic Courtès 3b32891b12
lint: 'check-derivation' tries all the package's supported systems.
This allows us to catch architecture-specific evaluation failures.

* guix/scripts/lint.scm (check-derivation): Move body into...
[try]: ... this.  New procedure.
Call 'try' for each supported system of PACKAGE.
2018-11-20 18:36:05 +01:00
Marius Bakke 4f70db97a0
Merge branch 'master' into core-updates 2018-11-20 01:14:12 +01:00
Alex Vong df730f6757
build-system: Add 'clojure-build-system'.
* guix/build-system/clojure.scm, guix/build/clojure-build-system.scm: New
files.
* guix/build/clojure-utils.scm (@*, @@*): New macros.
(%source-dirs, %test-dirs, %compile-dir, %main-class, %omit-source?,
%aot-include, %aot-exclude, %tests?, %test-include, %test-exclude,
%clojure-regex): New variables.
(package-name->jar-names, canonicalize-relative-path, find-files*,
file-sans-extension, relative-path->clojure-lib-string, find-clojure-libs,
compiled-from?, include-list\exclude-list, eval-with-clojure, create-jar):
New procedures.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'clojure-build-system'.
2018-11-19 12:07:44 +01:00
Alex Vong 53f316ab90
guix: Add clojure-utils.
* guix/build/clojure-utils.scm: New file.
* gnu/packages/lisp.scm (clojure)[arguments]: Use it.
* Makefile.am (MODULES): Add it.
2018-11-19 12:05:19 +01:00
Ludovic Courtès 1d6669afef
guix system: Fix 'init'.
Fixes a regression introduced in
52ee4479ef, whereby 'install' would now be
passed a <computed-file> object instead of a derivation.

* guix/scripts/system.scm (install): Call 'lower-object' on BOOTCFG.
2018-11-19 09:59:07 +01:00
Ludovic Courtès ab6caf4f1d
guix system: Clarify 'perform-action'.
* guix/scripts/system.scm (perform-action): Move non-monadic local
variables outside the 'mlet' form.
2018-11-18 23:37:45 +01:00
Ludovic Courtès 52ee4479ef
guix system: De-monadify bootloader installation script.
* guix/scripts/system.scm (bootloader-installer-derivation): Rename
to...
(bootloader-installer-script): ... this.  Use 'scheme-file' instead of
'gexp->file'.
(perform-action): Adjust accordingly.  Move 'lower-object' call to the
point where DRVS is computed.
2018-11-18 23:37:45 +01:00
Ludovic Courtès 6e47628d4c
guix system: Simplify bootloader package handling.
* guix/scripts/system.scm (perform-action): Remove 'bootloader-package'
variable.  Pass (bootloader-package bootloader) as the 2nd argument to
'bootloader-installer-derivation'.  Remove BOOTLOADER-PACKAGE from DRVS
since it's redundant.
2018-11-18 23:37:45 +01:00
Ludovic Courtès 9782c82217
system: De-monadify 'operating-system-bootcfg'.
* gnu/system.scm (operating-system-bootcfg): Remove 'mlet*' and
'lower-object' call.
* gnu/system/vm.scm (system-disk-image)
(system-qemu-image/shared-store): Adjust accordingly.
* guix/scripts/system.scm (perform-action): Add 'lower-object' call for
BOOTCFG.
2018-11-18 23:37:45 +01:00
Julien Lepiller 564cf93f2a
gnu: ocaml: Update to 4.7.0.
Update ocaml to the latest version and fixes dependent packages by
updating them or by adding new inputs, such as ocaml-num and ocamlbuild,
that were removed from the core ocaml package. Rename packages that
cannot be built with the new compiler with an ocaml4.02 prefix. Add
ocaml4.02 dependencies.

* gnu/packages/ocaml.scm (ocaml): Update to 4.7.0.
(ocaml-4.02, ocamlbuild, camlp4-4.02, ocaml-num, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit, ocaml4.02-camlzip)
(ocaml4.02-ocamlmod, ocaml4.02-zarith, ocaml4.02-qcheck, ocaml4.02-qtest)
(ocaml4.02-stringext, ocaml4.02-bisect, dune, ocaml-migrate-parsetree)
(ocaml-ppx-tools-versioned, ocaml-ppx-tools-versioned)
(ocaml4.02-bitstring, ocaml4.02-result, ocaml4.02-topkg, ocaml4.02-rresult)
(ocaml4.02-sqlite3, ocaml4.02-csv, ocaml4.02-mtime, ocaml4.02-cmdliner)
(ocaml4.02-fmt, ocaml4.02-astring, ocaml4.02-alcotest, ocaml4.02-ppx-tools)
(ocaml4.02-react, ocaml4.02-ssl, ocaml4.02-lwt, ocaml-lwt-log)
(ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath, ocaml4.02-bos)
(ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar, ocaml4.02-uutf)
(ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64, ocaml4.02-omake)
(ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-cppo, ocaml-seq, ocaml4.02-seq)
(ocaml4.02-re, ocaml4.02-ocplib-endian, ocaml4.02-easy-format)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): New packages.
(opam): Update to 2.0.0.
(camlp4): Update to 4.07+1.
(camlp5): Update to 7.06.
(hevea): Update to 2.32.
(coq)[inputs]: Add ocaml-num.
(emacs-tuareg): Update to 2.2.0.
(ocaml-menhir)[native-inputs]: Add ocamlbuild.
(ocaml-lablgtk): Update to 2.18.6.
(unison)[inputs]: Use ocaml-4.02.
(ocaml-findlib): Update to 1.8.0.
(ocaml-ounit)[native-inputs]: Add ocamlbuild.
(ocamlmod): Update to 0.0.9.
(ocaml-frontc)[arguments]: Use ocaml-4.02.
(ocaml-qcheck)[native-inputs]: Add ocamlbuild.
(ocaml-qtest)[native-inputs]: Remove ocaml-findlib and add ocamlbuild.
(ocaml-stringext)[native-inputs]: Add ocamlbuild.
(ocaml-bisect): Update to 1.3.1.
(ocaml4.01-bisect): Downgrade to 1.3.
(ocaml-bitstring): Update to 3.1.0.
(ocaml-topkg)[native-inputs]: Add ocamlbuild.
(ocaml-rresult)[native-inputs]: Add ocamlbuild.
(ocaml-sqlite3)[native-inputs]: Add ocamlbuild.
(ocaml-csv)[native-inputs]: Add ocamlbuild.
(ocaml-mtime)[native-inputs]: Add ocamlbuild.
(ocaml-cmdliner)[native-inputs]: Add ocamlbuild.
(ocaml-fmt)[native-inputs]: Add ocamlbuild.
(ocaml-astring)[native-inputs]: Add ocamlbuild.
(ocaml-alcotest)[native-inputs]: Add ocamlbuild.
(ocaml-ppx-tools)[native-inputs]: Add ocamlbuild.
(ocaml-react)[native-inputs]: Add ocamlbuild.
(ocaml-ssl)[arguments]: Return #t in phases.
(ocaml-lwt): Update to 4.1.0.
(ocaml-logs)[native-inputs]: Add ocamlbuild.
(ocaml-fpath)[native-inputs]: Add ocamlbuild.
(ocaml-bos)[native-inputs]: Add ocamlbuild.
(ocaml-xmlm): Update to 1.3.0.
(ocaml-ulex): Update to 1.2.0.
(ocaml-uchar)[native-inputs]: Add ocamlbuild.
(ocaml-uutf): Update to 1.0.1.
(ocaml-jsonm): Update to 1.0.1.
(ocaml-ocurl): Update to 0.8.2.
(ocaml-base64)[native-inputs]: Add ocamlbuild.
(ocamlify)[native-inputs]: Use ocaml-4.02.
(omake): Update to 0.10.3.
(ocaml-batteries): Update to 2.9.0.
(ocaml-pcre)[native-inputs]: Add ocamlbuild.
(ocaml-expect): Update 0.0.6.
(ocaml4.02-fileutils): Update to 0.5.3.
(ocaml-oasis): Update 0.4.11.
(ocaml-js-build-tools)[native-inputs]: Add ocamlbuild.
(ocaml-bin-prot): Rename to ocaml4.02-bin-prot.
(ocaml-fieldslib): Rename to ocaml4.02-fieldslib.
(ocaml-ppx-core): Rename to ocaml4.02-ppx-core.
(ocaml-ppx-optcomp): Rename to ocaml4.02-ppx-optcomp.
(ocaml-ppx-driver): Rename to ocaml4.02-ppx-driver.
(ocaml-cppo): Update to 1.6.5.
(ocaml-ppx-deriving): Rename to ocaml4.02-ppx-deriving.
(ocaml-ppx-type-conv): Rename to ocaml4.02-ppx-type-conv.
(ocaml-ppx-inline-test): Rename to ocaml4.02-ppx-inline-test.
(ocaml-ppx-bench): Rename to ocaml4.02-ppx-bench.
(ocaml-ppx-compare): Rename to ocaml4.02-ppx-compare.
(ocaml-sexplib): Rename to ocaml4.02-sexplib.
(ocaml-typerep): Rename to ocaml4.02-typerep.
(ocaml-variantslib): Rename to ocaml4.02-variantslib.
(ocaml-ppx-sexp-conv): Rename to ocaml4.02-ppx-sexp-conv.
(ocaml-ppx-variants-conv): Rename to ocaml4.02-ppx-variants-conv.
(ocaml-ppx-here): Rename to ocaml4.02-ppx-here.
(ocaml-ppx-assert): Rename to ocaml4.02-ppx-assert.
(ocaml-ppx-enumerate): Rename to ocaml4.02-ppx-enumerate.
(ocaml-ppx-let): Rename to ocaml4.02-ppx-let.
(ocaml-ppx-typerep-conv): Rename to ocaml4.02-ppx-typerep-conv.
(ocaml-ppx-sexp-value): Rename to ocaml4.02-ppx-sexp-value.
(ocaml-ppx-pipebang): Rename to ocaml4.02-ppx-pipebang.
(ocaml-ppx-bin-prot): Rename to ocaml4.02-ppx-bin-prot.
(ocaml-ppx-fail): Rename to ocaml4.02-ppx-fail.
(ocaml-ppx-custom-printf): Rename to ocaml4.02-ppx-custom-printf.
(ocaml-ppx-sexp-message): Rename to ocaml4.02-ppx-sexp-message.
(ocaml-ppx-fields-conv): Rename to ocaml4.02-ppx-fields-conv.
(ocaml-re): Update to 1.8.0.
(ocaml-ppx-expect): Rename to ocaml4.02-ppx-expect.
(ocaml-ppx-jane): Rename to ocaml4.02-ppx-jane.
(ocaml-core-kernel): Rename to ocaml4.02-core-kernel.
(ocaml-async-kernel): Rename to ocaml4.02-async-kernel.
(ocaml-async-rpc-kernel): Rename to ocaml4.02-async-rpc-kernel.
(ocaml-core): Rename to ocaml4.02-core.
(ocaml-async-unix): Rename to ocaml4.02-async-unix.
(ocaml-async-extra): Rename to ocaml4.02-async-extra.
(ocaml-async): Rename to ocaml4.02-async.
(ocaml-ocplib-endian)[native-inputs]: Update to 1.0.
(ocaml-cstruct): Rename to ocaml4.02-cstruct.
(ocaml-hex): Rename to ocaml4.02-hex.
(ocaml-ezjsonm): Rename to ocaml4.02-ezjsonm.
(ocaml-uri): Rename to ocaml4.02-uri.
(optcomp): Use ocaml-4.02.
(ocaml-piqilib): Update to 0.6.14.
(ocaml-uuidm)[native-inputs]: Add ocamlbuild.
(ocaml-graph): Update to 1.8.8.
(ocaml-piqi): Update to 0.7.6.
(bap): Update to 1.3.0.
(ocaml-camomile): Update to 1.0.1.
(ocaml-jbuilder): Use ocaml-4.02.
(ocaml-lambda-term): Update to 1.13.
(ocaml-utop): Update to 2.2.0.
(ocaml-integers)[native-inputs]: Add ocamlbuild.
(ocaml-ctypes): Update to 0.14.0.
(ocaml-ocb-stubblr)[native-inputs]: Add ocamlbuild.
(ocaml-tsdl)[native-inputs]: Add ocamlbuild.
* gnu/packages/machine-learning.scm (ocaml-mcl): Use ocaml-4.02.
* gnu/packages/maths.scm (cubicle): Update to 1.1.2.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
Update patch.
* guix/build-system/ocaml.scm: (default-ocaml4.02, default-ocaml4.02-findlib)
(package-with-ocaml4.02, strip-ocaml4.02-variant): New variables.
2018-11-18 18:51:08 +01:00
Julien Lepiller 5a0affba3f
build-system/ocaml: Use invoke and return #t.
* guix/build/ocaml-build-system.scm (configure, build, check, install)
(prepare-install): Use invoke and return #t.
2018-11-18 18:40:53 +01:00
Clément Lassieur d827fd31ca
progress: Do not display the last 0B transfer when size is unknown.
* guix/progress.scm (display-download-progress): Don't display anything when
both SIZE and TRANSFERRED are null.
2018-11-16 14:53:44 +01:00
Clément Lassieur 0289dc1473
progress: Fix crash because of division by zero.
* guix/progress.scm (display-download-progress): Handle the case where SIZE is
null.
2018-11-16 14:53:40 +01:00
Ludovic Courtès 89f1fee8e7
download: Access content-addressed mirrors over HTTPS.
Bug <http://bugs.gnu.org/22774> is no longer relevant now that we use
"builtin:download" exclusively.

* guix/download.scm (%content-addressed-mirrors): Use "https", not
"http".
2018-11-14 21:34:08 +01:00
Ludovic Courtès ee2cfdfe86
download: Add Software Heritage as a content-addressed mirror.
* guix/download.scm (%content-addressed-mirrors): Add Software
Heritage.
2018-11-14 21:34:07 +01:00
Marius Bakke 79ee97a144
Merge branch 'master' into core-updates 2018-11-14 21:20:46 +01:00
Ludovic Courtès f5a2724ae4
deduplication: Restore directory mtime and permissions after deduplication.
Fixes <https://bugs.gnu.org/33361>.

* guix/store/deduplication.scm (replace-with-link): Call 'set-file-time'
and 'chmod' after 'rename-file'.
* tests/nar.scm ("restore-file-set with directories (signed, valid)"):
New test.
2018-11-13 14:59:46 +01:00
Ludovic Courtès 8390869811
tests: Check file canonicalization for 'restore-file-set'.
* guix/tests.scm (canonical-file?): New procedure.
* tests/nar.scm ("restore-file-set (signed, valid)"): Check that every
item of FILES matches 'canonical-file?'.
2018-11-13 14:59:46 +01:00
Ludovic Courtès 1afe1985f5
nar: Access the database instead of connecting to the daemon.
* guix/store/database.scm (%default-database-file): New variable.
(path-id): Export.
* guix/nar.scm (finalize-store-file): Use 'with-database' instead of
'with-store', and use 'path-id' instead of 'valid-path?'.
2018-11-13 14:59:45 +01:00
Ricardo Wurmus 05a5721f06
build-system/dub: Let all phases return #T unconditionally.
* guix/build/dub-build-system.scm (configure, build, check): Return #T
unconditionally; use INVOKE.
2018-11-13 10:46:00 +01:00
Ludovic Courtès c6080c3249
store: Add a functional object cache and use it in 'lower-object'.
This leads to ~25% improvements on things like:

  guix system build desktop.tmpl --no-grafts -d

* guix/store.scm (<nix-server>)[object-cache]: New field.
* guix/store.scm (open-connection): Initialize it.
(cache-object-mapping, lookup-cached-object, %mcached): New procedures.
(mcached): New macro.
* guix/gexp.scm (lower-object): Use it.
* guix/grafts.scm (grafting?): New procedure.
2018-11-12 23:37:13 +01:00
Ludovic Courtès 9ed86fe175
tests: Add 'test-assertm' to (guix tests).
* guix/tests.scm (test-assertm): New macro.
* tests/gexp.scm (test-assertm): Remove.
* tests/profiles.scm (test-assertm): Remove.
* tests/challenge.scm (%store, test-assertm): Remove.
* tests/debug-link.scm (%store, test-assertm): Remove.
* tests/size.scm (%store, test-assertm): Remove.
2018-11-12 23:37:13 +01:00
Ricardo Wurmus 1767581fb5
build-system/haskell: Fix register phase.
This is a follow-up to commit a7e231a2a3.

Reported by Marius Bakke <mbakke@fastmail.com>.

* guix/build/haskell-build-system.scm (register): Use "when" instead of
"unless".
2018-11-12 18:21:04 +01:00
Pierre Neidhardt 0fd115d536
build-system/go: Plan removal of the pkg folder for go-1.11 onward.
* guix/build/go-build-system.scm (install): New comment.
2018-11-12 10:28:46 +01:00
Ludovic Courtès 6c843907e9
guix system: Invoking 'guix system init' twice keeps timestamps zeroed.
Fixes a bug whereby running 'guix system init config.scm /mnt' twice
would, on the second run, change timestamps in /mnt/gnu/store from the
Epoch to now.  This is because the 'register-path' call would bypass the
'reset-timestamps' phase altogether in that case, as a consequence of
commit bb3b6ccb05.

Reported by Christopher Baines.

* guix/scripts/system.scm (install): When TARGET/var/guix exists, delete
it.  As a side-effect, this ensures that later on, the 'register-path'
call invokes 'reset-timestamps' on all the copied store items.
2018-11-11 23:53:29 +01:00
Ludovic Courtès 652163154c
guix package: '--show' errors when asked for a non-existent package.
Fixes <https://bugs.gnu.org/33323>.
Reported by swedebugia <swedebugia@riseup.net>.

* guix/scripts/package.scm (process-query): Call 'leave' when
'find-packages-by-name' returns the empty list.
* tests/guix-package.sh: Test it.
2018-11-11 23:53:29 +01:00
Ludovic Courtès a3b72a8f17
ci: Add procedures to access evaluations.
* guix/ci.scm (<checkout>, <evaluation>): New record types.
(latest-builds): Add #:evaluation and #:system and honor it.  Define
'option'.
(json->checkout, json->evaluation, latest-evaluations)
(evaluations-for-commit): New procedures.
2018-11-10 23:33:46 +01:00
Ludovic Courtès 5230dce154
gnu-maintenance: Base kernel.org updater on HTML directory listings.
Partially fixes <https://bugs.gnu.org/28159>.

The FTP server at ftp.free.fr had become unable to produce directory
listings, effectively making the updater dysfunctional.  Furthermore FTP
is considered obsolescent so HTTP + HTML looks more future-proof.

* guix/gnu-maintenance.scm (html->sxml, html-links)
(latest-html-release): New procedures.
(latest-kernel.org-release): Rewrite in terms of 'latest-html-release'.
2018-11-10 23:33:46 +01:00
Ludovic Courtès bc1ff4aaba
gnu-maintenance: ".sign" and ".asc" files no longer match 'release-file?'.
* guix/gnu-maintenance.scm (release-file?): Exclude ".sign" and ".asc"
file in addition to ".sig".
2018-11-10 23:33:46 +01:00
Marius Bakke 64461ba20a
Merge branch 'master' into core-updates 2018-11-09 17:02:08 +01:00
Ludovic Courtès ea68b3f652
pull: Add missing monadic 'return'.
Fixes a regression introduced in
5f7dd092ca where, upon completion, 'guix
pull' would fail (instead of printing the new/upgraded packages) with
ugly errors like:

  successfully built /gnu/store/…-profile.drv
  1 package in profile
  Backtrace:
  […]
  In guix/store.scm:
    1605:24  1 (run-with-store _ _ #:guile-for-build _ #:system _ # _)
  In unknown file:
	     0 (_ #<build-daemon 256.97 2476b40>)

  ERROR: Wrong type to apply: #t

Reported by thorwil on #guix.

* guix/scripts/pull.scm (build-and-install): Add missing 'return' when
DRY-RUN? is wrong.
2018-11-07 21:56:16 +01:00
Marius Bakke 55174e668f
Merge branch 'master' into core-updates 2018-11-07 21:09:57 +01:00
Ludovic Courtès 72dc64f8f7
store-copy: Canonicalize the mtime and permissions of the store copy.
Fixes a bug whereby directories in the output of 'guix pack -f tarball'
would not be read-only.

* guix/build/store-copy.scm (reset-permissions): New procedure.
(populate-store): Pass #:keep-mtime? #t to 'copy-recursively'.  Call
'reset-permissions'.
* tests/pack.scm ("self-contained-tarball"): In CHECK, define
'canonical?' and use it to check that every file has an mtime of 1 and
is read-only.
* tests/guix-pack.sh: Invoke "chmod -Rf +w" before "rm -rf" in trap.
2018-11-06 23:21:24 +01:00
Ludovic Courtès 598a6b87cc
pack: Squashfs backend now honors '--localstatedir'.
* guix/scripts/pack.scm (squashfs-image)[database]: New variable.
[build]: Add (gnu build install) to the closure.  Call
'install-database-and-gc-roots' when DATABASE is true, and invoke
mksquashfs once more.
* tests/pack.scm ("squashfs-image + localstatedir"): New test.
2018-11-06 23:21:24 +01:00
Ludovic Courtès f5a2fb1bfb
pack: Docker backend now honors '--localstatedir'.
* guix/docker.scm (build-docker-image): Add #:database parameter.
Create /var/guix/db, /var/guix/profiles, etc. when DATABASE is true.
* guix/scripts/pack.scm (docker-image): Export.  Remove #:deduplicate?
parameter.  Define 'database' and pass it to 'docker-image'.
* tests/pack.scm (test-assertm): Recompile the derivation of
%BOOTSTRAP-GUILE.
("docker-image + localstatedir"): New test.
2018-11-06 23:21:24 +01:00
Ludovic Courtès b27ef1d46c
pack: Import (guix store database) only when '--localstatedir' is passed.
This is another way to address <https://bugs.gnu.org/32184>, which was
previously addressed in commit 19c924af4f.

* gnu/build/install.scm (register-closure): Move to...
* gnu/build/vm.scm (register-closure): ... here.  New procedure.
* guix/scripts/pack.scm (self-contained-tarball)[build]: Remove
now unneeded 'with-extensions' form and custom (guix config) module.
* tests/guix-pack.sh: Revert the strategy from
commit 19c924af4f.
* tests/pack.scm ("self-contained-tarball"): Likewise.
2018-11-06 23:21:23 +01:00
Ludovic Courtès ec4c81fe32
pack: Move store database creation to a separate derivation.
* guix/scripts/pack.scm (store-database): New procedure.
(self-contained-tarball): Use it when LOCALSTATEDIR? is true.
Remove 'schema' and add 'database'.
[build]: Pass DATABASE to 'populate-single-profile-directory'.
(squashfs-image): Remove #:deduplicate? parameter.
[build]: Remove (gnu build install) and (guix config) from the imported
modules.  Remove 'with-extensions'.
* gnu/build/install.scm (populate-single-profile-directory): Remove
 #:deduplicate?, #:register?, and #:schema; add #:database.  Remove call
to 'register-closure' and simply copy DATABASE instead.
2018-11-06 23:21:23 +01:00
Ricardo Wurmus 9da4848632
guix: Update to Bioconductor 3.8.
* guix/import/cran.scm (%bioconductor-version): Update to 3.8.
* guix/build-system/r.scm (bioconductor-uri): Update archive URL.
2018-11-06 18:21:24 +01:00
Ludovic Courtès e3744779aa
self: Install shell completion files.
* guix/self.scm (miscellaneous-files): New procedure.
(whole-package): Remove #:substitute-keys, add #:miscellany.
[build]: Remove code for SUBSTITUTE-KEYS and add code to copy MISCELLANY
to OUTPUT.
(compiled-guix): Adjust call to 'whole-package'.
2018-11-06 17:00:02 +01:00
Ludovic Courtès 6cf502d164
self: Rename 'sub-directory' to 'file-append*'.
* guix/self.scm (sub-directory): Rename to...
(file-append*): ... this.  Add #:recursive? parameter and pass it to
'local-file'.
(locale-data, info-manual, compiled-guix): Adjust accordingly.
2018-11-06 17:00:02 +01:00
Maxim Cournoyer 2e4d83398b
ssh: Honor the SOCKET-NAME argument of connect-to-remote-daemon.
* guix/ssh.scm (connect-to-remote-daemon): Pass the `socket-name' variable to
the `open-connection' call so that it is honored.
2018-11-05 21:28:59 -05:00
Ludovic Courtès 8d3beb3a44
self: Install substitute keys.
* guix/self.scm (whole-package): Add #:substitute-keys and honor it.
(compiled-guix): Pass #:substitute-keys to 'whole-package' when
PULL-VERSION is one.
2018-11-06 00:04:11 +01:00
Ludovic Courtès cbe7387c04
self: Remove extra paren in manual version string.
* guix/self.scm (info-manual)[build]: Remove extra closing paren in
VERSION.
2018-11-06 00:04:11 +01:00
Ludovic Courtès 5f7dd092ca
pull: Make '--dry-run' behave as expected.
* guix/scripts/pull.scm (show-help): Document '--dry-run'.
(build-and-install): Add #:dry-run? parameter and honor it.
(guix-pull): Remove (assoc-ref opts 'dry-run?) condition.  Instead, pass
it as #:dry-run? to 'build-and-install'.
* doc/guix.texi (Invoking guix pull): Document '--dry-run'.  Move
'--verbose' to the bottom.
2018-11-06 00:04:11 +01:00
Marius Bakke f4a5faa9dc
Merge branch 'master' into core-updates 2018-11-05 23:56:22 +01:00
Maxim Cournoyer 2f18b7329d
git-download: Print a message when falling back to a full fetch.
Otherwise the user might believe that git-fetch stalled, observing the lack of
output following a 'fatal' git error message (see:
https://debbugs.gnu.org/33100).

* guix/build/git.scm (git-fetch): Print message when falling back to a full
fetch.
2018-10-28 22:17:17 -04:00
Ludovic Courtès 63eb2b899b
Add 'guix processes'.
* guix/scripts/processes.scm, tests/processes.scm: New files.
* Makefile.am (MODULES): Add the former.
(SCM_TESTS): Add the latter.
* po/guix/POTFILES.in: Add guix/scripts/processes.scm.
* doc/guix.texi (Invoking guix processes): New node.
(Invoking guix-daemon): Reference it.
2018-10-29 00:13:38 +01:00
Arun Isaac 69b0a847fb
import: hackage: Do not repeat inputs in native-inputs.
* guix/import/hackage.scm (hackage-module->sexp): Do not repeat inputs again
in native-inputs. native-inputs should only contain packages that are not
already listed in inputs.
2018-10-28 13:51:20 +05:30
Ludovic Courtès 932d160056
gexp: 'gexp-modules' now consistently deletes duplicates.
Fixes <https://bugs.gnu.org/32966>.
Reported by Clément Lassieur <clement@lassieur.org>.

* guix/gexp.scm (gexp-attribute): Add 'equal?' optional parameter; pass
it to 'delete-duplicates'.
(gexp-modules)[module=?]: New procedure.
Pass it to 'gexp-attribute'.
* tests/gexp.scm ("gexp-modules deletes duplicates"): New test.
2018-10-27 16:39:29 +02:00
Ludovic Courtès 003789e837
pack: Hide 'zip' colliding binding.
* guix/scripts/pack.scm: Hide 'zip' from (gnu packages compression).
2018-10-27 16:39:29 +02:00
Ludovic Courtès 46727e3a9d
pack: Remove unused variable.
* guix/scripts/pack.scm (self-contained-tarball)[libgcrypt]: Remove.
2018-10-27 16:39:29 +02:00
Ludovic Courtès fdc4f665dc
profiles: Fix typo in exports.
* guix/profiles.scm (&profile-collistion-error): Fix typo in export list.
2018-10-26 20:05:21 +02:00
Ludovic Courtès 62a14bd26f
scripts: Suggest running 'guix gc' when we're short on disk space.
* guix/scripts.scm (%disk-space-warning): New variable.
(warn-about-disk-space): New procedure.
* guix/scripts/package.scm (build-and-use-profile): Use it.
* guix/scripts/system.scm (process-action): Likewise.
2018-10-23 01:04:39 +02:00
Marius Bakke ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Alex Vong 418f1b2414
java-utils: Use 'strip-store-file-name'.
See the discussion at
<https://lists.gnu.org/archive/html/guix-devel/2018-10/msg00250.html>.

* guix/build/java-utils.scm (package-name-version): Remove it.
(install-javadoc): Use 'strip-store-file-name' instead of
'package-name-version'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:11:07 +02:00
Alex Vong 58352f269e
build-system/haskell: Use 'strip-store-file-name'.
See the discussion at
<https://lists.gnu.org/archive/html/guix-devel/2018-10/msg00250.html>.

* guix/build/haskell-build-system.scm (package-name-version): Remove it.
(configure): Use 'strip-store-file-name' instead of 'package-name-version'.
(setup-compiler): Likewise.
(make-ghc-package-database): Likewise.
(register): Likewise.
* gnu/packages/haskell.scm (ghc-cairo)[arguments]: Likewise.
* gnu/packages/agda.scm (agda)[arguments]: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:11:07 +02:00
Ludovic Courtès 19c924af4f
tests: Run 'guix pack' tests using the external store.
Fixes <https://bugs.gnu.org/32184>.

* guix/tests.scm (call-with-external-store): New procedure.
(with-external-store): New macro.
* tests/pack.scm (%store): Remove.
(test-assertm): Add 'store' parameter.
("self-contained-tarball"): Wrap in 'with-external-store'.
* tests/guix-pack.sh: Connect to the external store, if possible, by
setting NIX_STORE_DIR and GUIX_DAEMON_SOCKET.  Remove most uses of
'--bootstrap'.
2018-10-19 18:28:57 +02:00
Ludovic Courtès fbdb7b9526
pack: Fix "-C none -f tarball".
Fixes a regression introduced in
48b444304e whereby "guix pack -C none
hello" would fail with:

  ERROR: In procedure string-join:
  In procedure string-join: Wrong type argument in position 1: #f
  builder for `/gnu/store/…-tarball-pack.tar.drv' failed with exit code 1

* guix/scripts/pack.scm (self-contained-tarball): Adjust for when
'compressor-command' returns #f.
2018-10-19 18:28:57 +02:00
Leo Famulari 7277d06d8b
gnu: Use pypi.org.
<pypi.io> redirects to <pypi.org>.

* guix/build-system/python.scm (pypi-uri): Replace pypi.io with pypi.org.
* guix/import/pypi.scm (pypi-url?): Likewise.
* tests/pypi.scm: Likewise.
2018-10-18 23:46:33 -04:00
Ludovic Courtès 39d7fdce45
services: dhcp-client: Deprecate 'dhcp-client-service' procedure.
* gnu/services/networking.scm (dhcp-client-service-type): Add default
value.
* gnu/system/examples/bare-bones.tmpl: Use (service
dhcp-client-service-type) instead of (dhcp-client-service).
* gnu/system/examples/beaglebone-black.tmpl: Likewise.
* gnu/tests/base.scm (%avahi-os): Likewise.
* gnu/tests/databases.scm (%memcached-os): Likewise.
(%mongodb-os): Likewise.
* gnu/tests/dict.scm (%dicod-os): Likewise.
* gnu/tests/mail.scm (%opensmtpd-os): Likewise.
(%exim-os): Likewise.
(%dovecot-os): Likewise.
* gnu/tests/messaging.scm (run-xmpp-test): Likewise.
(run-bitlbee-test): Likewise.
* gnu/tests/monitoring.scm (%prometheus-node-exporter-os): Likewise.
* gnu/tests/networking.scm (%inetd-os): Likewise.
(run-iptables-test): Likewise.
* gnu/tests/nfs.scm (%base-os): Likewise.
* gnu/tests/rsync.scm (%rsync-os): Likewise.
* gnu/tests/ssh.scm (run-ssh-test): Likewise.
* gnu/tests/version-control.scm (%cgit-os): Likewise.
(%git-http-os): Likewise.
(%gitolite-os): Likewise.
* gnu/tests/virtualization.scm (%libvirt-os): Likewise.
* gnu/tests/web.scm (%httpd-os): Likewise.
(%nginx-os): Likewise.
(%varnish-os): Likewise.
(%php-fpm-os): Likewise.
(%hpcguix-web-os): Likewise.
(%tailon-os): Likewise.
* tests/guix-system.sh: Likewise.
* doc/guix.texi (Networking Services): Document
'dhcp-client-service-type' and remove 'dhcp-client-service'.
2018-10-18 01:12:22 +02:00
Marius Bakke d02bb02f7d
Merge branch 'master' into core-updates 2018-10-17 20:47:11 +02:00
Pierre Neidhardt c4d62443eb
import cran: Document "recursive" option.
* guix/scripts/import/cran.scm: (show-help): Document "recursive" option.
2018-10-17 13:06:25 +02:00
Eric Bavier 278f86a43f
ui: Fix port-buffering with guile@2.0.
* guix/status.scm (build-event-output-port)[guile@2.0]: Do not call 'setvbuf'
on custom binary port.
* tests/status.scm (current-build-output-port, UTF-8 + garbage)[guile@2.0]:
Use "?" in place of REPLACEMENT CHARACTER.
2018-10-16 17:12:09 -05:00
Danny Milosavljevic ad0082afe0
import: json: Handle the error case.
* guix/import/json.scm (json-fetch-alist): Handle the error case.
2018-10-16 23:17:36 +02:00
Ludovic Courtès f9a8fce10f
status: Build upon multiplexed build output.
This allows for more accurate status tracking and parsing of extended
build traces.

* guix/status.scm (multiplexed-output-supported?): New procedure.
(print-build-event): Don't print \r when PRINT-LOG? is true.
Adjust 'build-log' handling for when 'multiplexed-output-supported?'
returns true.
(bytevector-index, split-lines): New procedures.
(build-event-output-port)[%build-output-pid, %build-output]
[%build-output-left]: New variables.
[process-line]: Handle "@ build-output" traces.
[process-build-output]: New procedure.
[write!]: Add case for when %BUILD-OUTPUT-PID is true.  Use
'bytevector-index' rather than 'string-index'.
(compute-status): Add #:derivation-path->output-path.  Use it.
* tests/status.scm ("compute-status, multiplexed build output"):
New test.
("build-output-port, UTF-8")
("current-build-output-port, UTF-8 + garbage"): Adjust to new
'build-log' output.
* guix/scripts/build.scm (set-build-options-from-command-line):
Pass #:multiplexed-build-output?.
(%default-options): Add 'multiplexed-build-output?'.
* guix/scripts/environment.scm (%default-options): Likewise.
* guix/scripts/pack.scm (%default-options): Likewise.
* guix/scripts/package.scm (%default-options): Likewise.
* guix/scripts/pull.scm (%default-options): Likewise.
* guix/scripts/system.scm (%default-options): Likewise.
2018-10-15 23:06:55 +02:00
Ludovic Courtès 6ef61cc4c3
daemon: Support multiplexed build output.
This allows clients to tell whether output comes from the daemon or, if
it comes from a builder, from which builder it comes.  The latter is
particularly useful when MAX-BUILD-JOBS > 1.

* nix/libstore/build.cc (DerivationGoal::tryBuildHook)
(DerivationGoal::startBuilder): Print the child's PID in "@ build-started"
traces.
(DerivationGoal::handleChildOutput): Define 'prefix', pass it to
'writeToStderr'.
* nix/libstore/globals.cc (Settings:Settings): Initialize
'multiplexedBuildOutput'.
(Settings::update): Likewise.
* nix/libstore/globals.hh (Settings)[multiplexedBuildOutput]: New field.
Update 'printBuildTrace' documentation.
* nix/libstore/worker-protocol.hh (PROTOCOL_VERSION): Bump to 0.163.
* nix/nix-daemon/nix-daemon.cc (performOp) <wopSetOptions>: Special-case
"multiplexed-build-output" and remove "use-ssh-substituter".
* guix/store.scm (set-build-options): Add #:multiplexed-build-output?
and honor it.
(%protocol-version): Bump to #x163.
* tests/store.scm ("multiplexed-build-output"): New test.

fixlet
2018-10-15 22:40:35 +02:00
Ludovic Courtès 38a2f5eafb
status: Avoid "sucessfully built" messages when in quiet mode.
* guix/status.scm (print-build-event): Print "successfully built"
messages only when PRINT-LOG? is true, like we do for
'substituter-started' events.
2018-10-14 23:48:49 +02:00
Ludovic Courtès e0caff9ed0
describe: Canonicalize the profile.
Fixes a regression introduced in
795d430d90 whereby 'guix describe' would
no longer display the generation number of ~/.config/guix/current.

* guix/scripts/describe.scm (guix-describe): Call 'canonicalize-profile'.
2018-10-14 23:48:49 +02:00
Ludovic Courtès aa227b3be3
pull: Fix target of /var/guix/profiles/per-user/USER/current-guix.
This is a followup to 8155a20907.

* guix/scripts/pull.scm (migrate-generations): Compute the right target
for /var/guix/profiles/per-user/USER/current-guix.  Previously we'd
return "current-N-link" instead of "current-guix-N-link'.
2018-10-12 16:45:34 +02:00
Ludovic Courtès 8036b0942b
pull: Don't use rename(2) across potentially different devices.
Reported by Formbi on #guix.

* guix/scripts/pull.scm (migrate-generations): Use 'symlink' and
'delete-file' instead of 'rename-file'.  The latter could lead to EXDEV
when $HOME and /var were different partitions.
2018-10-12 15:18:41 +02:00
Ludovic Courtès 1c795c4fd2
profiles: 'user-friendly-profile' now recognizes ~/.config/guix/current.
* guix/profiles.scm (%known-shorthand-profiles): New variable.
(user-friendly-profile): Use it.
2018-10-12 00:13:14 +02:00
Ludovic Courtès 8155a20907
pull: Create /var/guix/profiles/per-user/USER/current-guix.
Previously the migration code would fail to create that file, so
~/.config/guix/current would be dangling.

* guix/scripts/pull.scm (migrate-generations): Create
/var/guix/profiles/per-user/USER/current-guix.
2018-10-12 00:13:14 +02:00
Ludovic Courtès 795d430d90
pull: Turn ~/.config/guix/current into a symlink to /var/guix/profiles.
This is more consistent with what 'guix package' does, more pleasant for
users (we no longer clobber ~/.config/guix), and more
cluster-friendly (since /var/guix/profiles is usually an NFS share
already.)

* guix/scripts/pull.scm (%current-profile, %user-profile-directory): New
variables.
(migrate-generations, ensure-default-profile): New procedures.
(guix-pull): Use %CURRENT-PROFILE by default.  Call
'ensure-default-profile'.
* doc/guix.texi (Invoking guix pull): Adjust 'guix package -p
~/.config/guix/current' example.
* guix/scripts.scm (warn-about-old-distro): Check %PROFILE-DIRECTORY
"/current-guix".
2018-10-11 18:29:11 +02:00
Ludovic Courtès 50c72ecd9e
profiles: Generalize 'canonicalize-profile'.
* guix/profiles.scm (canonicalize-profile): Rewrite to work with any
profile that lives under %PROFILE-DIRECTORY.
2018-10-11 18:29:11 +02:00
Ludovic Courtès 77dcfb4c02
profiles: Add 'ensure-profile-directory'.
* guix/scripts/package.scm (ensure-default-profile): Move
/var/guix/profiles/per-user handling to...
* guix/profiles.scm (ensure-profile-directory): ... here.  New
procedure.
* po/guix/POTFILES.in: Add 'guix/profiles.scm'.
2018-10-11 18:29:11 +02:00
Ludovic Courtès 099bb0175f
self: Use Guile 2.2 unconditionally for recent 'guix pull'.
Fixes <https://bugs.gnu.org/32929>.
Reported by Michael Bowcutt <mwb71@case.edu>.

* guix/self.scm (guix-derivation)[guile]: Use "2.2" when PULL-VERSION >= 1.
Likewise for the #:guile-version argument.
2018-10-10 14:54:18 +02:00