Commit Graph

32721 Commits

Author SHA1 Message Date
Ricardo Wurmus 44057a461b
tests: Fix arguments in pack test.
This is a follow-up to commit 5ffac538aa.

* tests/pack.scm (self-contained-tarball): Adjust arguments to
"self-contained-tarball".
2018-06-01 14:18:31 +02:00
Ludovic Courtès 5d669883ec
gexp: 'compiled-modules' no longer overrides (guix build utils).
Until now 'compiled-modules' would override (guix build utils) with its
own.  Thus, when asked to build a different (guix build utils),
via #:module-path, it would fail badly because a (guix build utils)
module was already loaded and possibly incompatible with the new one.

This happened when running 'guix pull --branch=core-updates' from
current master: in 'core-updates', (guix build utils) exports
'ignore-error?' but in 'master' it does not.  Thus, 'guix pull' would
fail with:

  no binding `invoke-error?' in module (guix build utils)
  builder for `/gnu/store/…-module-import-compiled.drv' failed with exit code 1
  cannot build derivation `/gnu/store/…-compute-guix-derivation.drv': 1 dependencies couldn't be built

This patch fixes it.

* guix/gexp.scm (compiled-modules)[build-utils-hack?]: New variable.
[build]: Load MODULES/build/utils.scm when it exists.
2018-06-01 13:50:27 +02:00
Robin Templeton 514026d7de
gnu: rust: Add support for building 32-bit packages on 64-bit hosts.
* gnu/packages/rust.scm (rust-bootstrap, rust-1.23): Use
nix-system->gnu-triplet to determine the system type.
(rust-1.19): Use readelf instead of nm in the atomic-lock-free test.
(rust-1.23): Disable the cargo_test_env test. Disable parallel execution of
tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:27 +02:00
Timothy Sample a078a6ec3b
gnu: Add git-annex.
* gnu/packages/version-control.scm (git-annex): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:27 +02:00
Timothy Sample 4e5d9bf20e
gnu: Add ghc-disk-free-space.
* gnu/packages/haskell.scm (ghc-disk-free-space): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:27 +02:00
Timothy Sample 1ea3971992
gnu: ghc-psqueues: Allow building with newer versions of QuickCheck.
* gnu/packages/haskell.scm (ghc-psqueues)[arguments]: Add configure
flag to allow newer versions of QuickCheck.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:27 +02:00
Timothy Sample 6950a45073
gnu: Add ghc-safesemaphore.
* gnu/packages/haskell.scm (ghc-safesemaphore): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:27 +02:00
Timothy Sample 92c2097bc2
gnu: Add ghc-esqueleto.
* gnu/packages/haskell.scm (ghc-esqueleto): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Timothy Sample a39e6faee9
gnu: Add ghc-ifelse.
* gnu/packages/haskell.scm (ghc-ifelse): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Timothy Sample e3aae496f9
gnu: Add ghc-feed.
* gnu/packages/haskell.scm (ghc-feed): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Timothy Sample 4c798726b4
gnu: Add ghc-bloomfilter.
* gnu/package/haskell.scm (ghc-bloomfilter): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Rouby Pierre-Antoine 93b83eb31e
services: Add hpcguix-web.
* gnu/service/web.scm (<hpcguix-web-configuration>): New record-type.
  (%hpcguix-web-accounts): New variable.
  (%hpcguix-web-activation,hpcguix-web-shepherd-service,
  hpcguix-web-service-type): New procedures.
* gnu/tests/web.scm (run-hpcguix-web-server-test): New procedure.
  (%hpcguix-web-specs, %hpcguix-web-os, %test-hpcguix-web): New variable.
* doc/guix.texi (Web Services): Add 'hpcguix-web'.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-06-01 13:50:26 +02:00
Rouby Pierre-Antoine d6a4dfec90
gnu: Add hpcguix-web.
* gnu/package/web.scm (hpcguix-web): New variable.

Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2018-06-01 13:50:26 +02:00
Ludovic Courtès 7a4e2eaab3
marionette: Add 'wait-for-tcp-port'.
* gnu/build/marionette.scm (wait-for-tcp-port): New procedure.
* gnu/tests/dict.scm (run-dicod-test)["connect inside"]: Use it instead
of the inline loop.
2018-06-01 13:50:26 +02:00
Ludovic Courtès 5ede50b850
gnu: emacs-w3m: Update and allow builds with Emacs 26.
* gnu/packages/emacs.scm (emacs-w3m)[source]: Grab the source from
github.com.
[native-inputs]: Add TEXINFO.
[arguments]: Add 'support-emacs!' phase.  In 'patch-exec-paths' phase,
make w3m.el and w3m-image.el writable.  Remove substitution for
'w3m-image-viewer', which no longer exists.
2018-06-01 13:50:26 +02:00
Stefan Stefanović 8674abb1dd
gnu: sddm: Fix CMake build.
* gnu/packages/display-managers.scm (sddm): Fix CMake build.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/sddm-fix-build-with-qt-5.11-1024.patch: New file.

Signed-off-by: Rutger Helling <rhelling@mykolab.com>
2018-06-01 12:17:00 +02:00
Mathieu Othacehe 8fc3a971b0
scripts: system: Sort profile generations in reverse order.
* guix/scripts/system.scm (profile-boot-parameters): Reverse
generation-numbers list. This allows old generations to be listed from most
recent to oldest in bootloaders configuration files.
2018-06-01 09:40:07 +02:00
Leo Famulari e90322d201
gnu: prosody: Update to 0.10.2 [fixes CVE-2018-10847].
* gnu/packages/messaging.scm (prosody): Update to 0.10.2.
2018-05-31 20:31:46 -04:00
Konrad Hinsen 555ab0853b
gnu: Add emacs-zotxt.
* gnu/packages/emacs.scm (emacs-zotxt): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-31 18:13:09 +02:00
Konrad Hinsen 45dca193a4
gnu: Add emacs-org-caldav.
* gnu/packages/emacs.scm (emacs-org-caldav): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-31 18:13:08 +02:00
Konrad Hinsen ec8a9892d1
gnu: Add python-bigfloat.
* gnu/packages/python.scm (python-bigfloat, python2-bigfloat): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-31 18:13:08 +02:00
Fis Trivial 73d854232f
gnu: bear: Fix python path.
* gnu/packages/build-tools.scm (bear)
[inputs]: Add python-wrapper.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-31 18:13:08 +02:00
Ludovic Courtès 9768848af8
records: Make a couple of procedures available at expansion time.
* guix/records.scm (current-abi-identifier, abi-check): Wrap in
'eval-when'.
2018-05-31 18:13:08 +02:00
Ludovic Courtès b1059b38b2
system: 'read-boot-parameters' provides a more meaningful warning.
'system' here was bound to Guile's 'system' procedure.

* gnu/system.scm (read-boot-parameters): Fix argument for fallback
warning.
2018-05-31 18:13:08 +02:00
Ludovic Courtès 69a05eab35
file-systems: Always wait for devices to show up.
Previously, 'canonicalize-device-spec' would wait for devices when they
were specified as a label or UUID, but would not wait when the user
passed a "/dev" file name directly.  This could cause problems when
the /dev node takes a while to show up.

* gnu/build/file-systems.scm (canonicalize-device-spec): Add 'resolve'
call in the 'string?' case.
2018-05-31 18:13:08 +02:00
Ludovic Courtès e13240f598
self: Reduce the set of dependencies.
By mistake we were adding more dependencies than needed to the Scheme
derivations.

* guix/self.scm (compiled-guix)[dependencies]: Use
'package-transitive-propagated-inputs', not 'package-transitive-inputs'.
2018-05-31 18:13:08 +02:00
Ricardo Wurmus babeea3f9f
build-system/r: Use invoke.
* guix/build/r-build-system.scm (invoke-r): Use invoke.
(pipe-to-r): Raise invoke-error on non-zero return value.
(check): Unconditionally return #t.
2018-05-31 13:24:17 +02:00
Ricardo Wurmus 59f87b44da
Merge branch 'master' into core-updates 2018-05-31 13:23:49 +02:00
Ricardo Wurmus 404e5c7d7d
gnu: r-servr: Update to 0.10.
* gnu/packages/web.scm (r-servr): Update to 0.10.
[native-inputs]: Remove r-rcpp.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus ce8b9e3b1c
gnu: r-seurat: Update to 2.3.1.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.1.
[propagated-inputs]: Remove r-gridextra; add r-reticulate.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 508dd24abe
gnu: r-shiny: Update to 1.1.0.
* gnu/packages/web.scm (r-shiny): Update to 1.1.0.
[source]: Fetch from git.
[propagated-inputs]: Add r-crayon.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus eb0d599a67
gnu: r-rjson: Update to 0.2.19.
* gnu/packages/web.scm (r-rjson): Update to 0.2.19.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 71644c0ee8
gnu: r-htmltable: Update to 1.12.
* gnu/packages/web.scm (r-htmltable): Update to 1.12.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus beb0878fe5
gnu: r-directlabels: Update to 2018.05.22.
* gnu/packages/statistics.scm (r-directlabels): Update to 2018.05.22.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 089e037638
gnu: r-ranger: Update to 0.10.0.
* gnu/packages/statistics.scm (r-ranger): Update to 0.10.0.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 14bb6f5f83
gnu: r-tclust: Update to 1.4-1.
* gnu/packages/statistics.scm (r-tclust): Update to 1.4-1.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 9fad62743c
gnu: r-caret: Update to 6.0-80.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-80.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 9bcc68fbf6
gnu: r-quantreg: Update to 5.36.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.36.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 13dc492435
gnu: r-rrcov: Update to 1.4-4.
* gnu/packages/statistics.scm (r-rrcov): Update to 1.4-4.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 6f96c2d89e
gnu: r-ggthemes: Update to 3.5.0.
* gnu/packages/statistics.scm (r-ggthemes): Update to 3.5.0.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 366dd8d7cb
gnu: r-runit: Update to 0.4.32.
* gnu/packages/statistics.scm (r-runit): Update to 0.4.32.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus edb29f2986
gnu: r-purrr: Update to 0.2.5.
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.5.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus e94d827440
gnu: r-tidyr: Update to 0.8.1.
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.1.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 1957c20e0c
gnu: r-synchronicity: Update to 1.3.4.
* gnu/packages/statistics.scm (r-synchronicity): Update to 1.3.4.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 7da0790e2a
gnu: r-rngtools: Update to 1.3.1.
* gnu/packages/statistics.scm (r-rngtools): Update to 1.3.1.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 3a6051659d
gnu: r-pkgmaker: Update to 0.27.
* gnu/packages/statistics.scm (r-pkgmaker): Update to 0.27.
[propagated-inputs]: Add r-bibtex, r-magrittr, r-stringi, and r-withr.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus b4ca0076bd
gnu: r-lambda-r: Update to 1.2.3.
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.3.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus a52bb97a79
gnu: r-plotrix: Update to 3.7-2.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.7-2.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 1ce6be5ee2
gnu: r-data-table: Update to 1.11.4.
* gnu/packages/statistics.scm (r-data-table): Update to 1.11.4.
2018-05-31 13:21:31 +02:00
Ricardo Wurmus 2d7758c1d6
gnu: r-rlang: Update to 0.2.1.
* gnu/packages/statistics.scm (r-rlang): Update to 0.2.1.
2018-05-31 13:21:31 +02:00