Commit Graph

2959 Commits

Author SHA1 Message Date
Eric Bavier 85a84cbd83 gnu: openmpi: Fix typo in download uri
* gnu/packages/mpi.scm (openmpi)[origin]: Fix typo.
2014-05-08 17:06:46 -05:00
Eric Bavier 0fc54d4b31 gnu: fftw: Add dependency on openmpi.
* gnu/packages/algebra.scm (fftw)[inputs,arguments]: Add OpenMPI.
2014-05-08 17:00:27 -05:00
Eric Bavier 2cf287df59 gnu: fftw: Upgrade to 3.3.4
* gnu/packages/algebra.scm (fftw): Upgrade to 3.3.4.
2014-05-08 17:00:27 -05:00
Ludovic Courtès a00dd9fbf4 services: Add service to cleanly unmount the root file system.
* gnu/services/base.scm (root-file-system-service,
  user-processes-service): New procedures.
  (mingetty-service, nscd-service, syslog-service, guix-service): Add
  requirement on 'user-processes'.
  (%base-services): Add (user-processes-service)
  and (root-file-system-service).
* gnu/services/xorg.scm (slim-service): Add requirement on
  'user-processes'.
2014-05-08 23:42:15 +02:00
Ludovic Courtès 474b832d5e linux-initrd: Don't leak /dev/console file descriptors.
* guix/build/linux-initrd.scm (switch-root): Simplify /dev/console
  code.  This fixes a bug where we would leak the IN and OUT file
  descriptors.
2014-05-08 23:42:15 +02:00
Ludovic Courtès ef4ab0a4c5 doc: Mention Kiselyov's work on "staging".
* doc/guix.texi (G-Expressions): Mention Oleg's work on "staging" in
  footnote.
2014-05-08 23:42:15 +02:00
Ludovic Courtès 03178aec1d git-download: Disable TLS certificate verification.
* guix/build/git.scm (git-fetch): Add 'setenv' call.
2014-05-08 23:42:15 +02:00
Eric Bavier 8ede638c4b gnu: openmpi: Avoid "open source" verbiage
* gnu/packages/mpi.scm (openmpi)[synopsis,description]: Remove mention
  of "open source".
2014-05-08 14:48:59 -05:00
Eric Bavier d8c7eeb996 gnu: Add petsc-openmpi.
* gnu/packages/maths.scm (petsc-openmpi): New variable.
  (petsc-complex-openmpi): New variable.
2014-05-08 12:42:17 -05:00
Eric Bavier 10b11968c8 gnu: petsc: Clean some more leaked chroot references
* gnu/packages/maths.scm (petsc)[arguments]: Scrub some
  config-generated header files before build.  Only remove files if
  they exist.
2014-05-08 12:42:17 -05:00
Eric Bavier fb0e370928 gnu: Add OpenMPI
* gnu/packages/mpi.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2014-05-08 12:42:17 -05:00
Ludovic Courtès a29a09fc29 Change 'nix-upstream' submodule URL.
* .gitmodules: Use https, not http.  Reported by
  Pjotr Prins <pjotr.public12@thebird.nl>.
2014-05-08 18:38:03 +02:00
Ludovic Courtès b1995341ce linux-initrd: Update /etc/mtab.
* guix/build/linux-initrd.scm (mount-root-file-system): Populate
  /root/etc/mtab.
  (mount-file-system): Update ROOT/etc/mtab.
2014-05-08 00:22:26 +02:00
Ludovic Courtès 538cc2e016 Remove now unneeded (guix build gnome) module.
* guix/build/gnome.scm: Remove.
* Makefile.am (MODULES): Update accordingly.
2014-05-07 14:32:36 +02:00
Ludovic Courtès ce2df078d7 gnu: Make $XDG_DATA_DIRS a search path variable for GLib.
* gnu/packages/glib.scm (glib): Add 'native-search-paths' and
  'search-paths' fields.
* gnu/packages/gnome.scm (libpeas): Remove 'arguments' field.
  (librsvg)[arguments]: Remove #:modules and #:imported-modules.
  Remove settings of INTROSPECTION_SCANNER_ARGS and
  INTROSPECTION_COMPILER_ARGS in makefiles.
* gnu/packages/gtk.scm (gtk+): Likewise.
2014-05-06 23:10:11 +02:00
Ludovic Courtès 141aed8087 gnu: gobject-introspection is usually meant to be a native input.
* gnu/packages/gtk.scm (atk, pango, gdk-pixbuf, gtk+): Move
  gobject-introspection to 'native-inputs' since it's only used at build
  time.
* gnu/packages/gnome.scm (libpeas): Move pkg-config,
  gobject-introspection, and intltool to 'native-inputs'.
2014-05-06 22:47:21 +02:00
Ludovic Courtès 63016e7cd0 gnu: Add librsvg.
* gnu/packages/gnome.scm (librsvg): New variable.
2014-05-06 22:29:55 +02:00
Ludovic Courtès 26a728eb09 linux-initrd: Delete files from the initrd ramfs when switching roots.
* guix/build/linux-initrd.scm (switch-root): Delete file from the old
  root.  Chdir to / after 'chroot' call.  Re-open file descriptors 0, 1,
  and 2.
  (boot-system): Move 'loading' message after the 'switch-root' call.
* gnu/system.scm (operating-system-boot-script): Add loop that closes
  file descriptor before calling 'execl'.
2014-05-06 18:18:22 +02:00
Ludovic Courtès 94e3029a83 gnu: pius: Use Python 2.
* gnu/packages/gnupg.scm (pius): Use Python 2.
2014-05-06 16:48:58 +02:00
Ludovic Courtès 78214b4b89 gnu: make-bootstrap: Add missing export.
* gnu/packages/make-bootstrap.scm: Export '%guile-static-stripped'.  The
  problem was hidden because of <http://bugs.gnu.org/17418>.
2014-05-06 15:01:39 +02:00
Ludovic Courtès f57d263929 gnu: e2fsprogs: Install the libext2fs Info manual.
* gnu/packages/linux.scm (e2fsprogs)[native-inputs]: Add TEXINFO.
2014-05-06 14:26:49 +02:00
Ludovic Courtès 0997771ac1 gnu: e2fsprogs: Use 'static-package' for the statically-linked variant.
* gnu/packages/linux.scm (e2fsprogs/static): Remove.
  (e2fsck/static): Use (static-package e2fsprogs) instead.
2014-05-06 14:12:41 +02:00
Ludovic Courtès fd42e6b803 gnu: gdb: Upgrade to 7.7.1.
* gnu/packages/gdb.scm (gdb): Upgrade to 7.7.1.
2014-05-06 14:06:41 +02:00
Ludovic Courtès 03f4500118 gnu: gdb: Add dependency on libxml2.
* gnu/packages/gdb.scm (gdb)[inputs]: Add LIBXML2.
2014-05-06 14:06:16 +02:00
Ludovic Courtès 2517859411 gnu: Add libgsf.
* gnu/packages/gnome.scm (libgsf): New variable.
2014-05-06 00:26:10 +02:00
Ludovic Courtès 1dd26275a3 gnu: Add libcroco.
* gnu/packages/gnome.scm (libcroco): New variable.
2014-05-06 00:20:46 +02:00
Ludovic Courtès 6f194a1e77 gnu: pybugz: Add fixlet patches.
* gnu/packages/python.scm (python2-pybugz)[source]: Add 'patches'
  field.
* gnu/packages/patches/pybugz-encode-error.patch,
  gnu/packages/patches/pybugz-stty.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
2014-05-05 17:12:55 +02:00
Ludovic Courtès 515eba4543 gnu-maintenance: Add missing type check.
* guix/gnu-maintenance.scm (gnu-package?): Only call 'mirror-type' when
  URL is a string.
2014-05-05 09:00:00 +02:00
Ludovic Courtès 1d4628329d linux-initrd: Improve root file system switching.
* guix/build/linux-initrd.scm (move-essential-file-systems,
  switch-root): New procedures.
  (MS_MOVE): New variable.
  (boot-system): Remove 'mount-essential-file-systems' call for ROOT.
  Use 'switch-root' instead of chdir + chroot.
2014-05-04 22:24:47 +02:00
Ludovic Courtès 2d49f84522 services: networking: Fix typo in static networking service.
* gnu/services/networking.scm (static-networking-service): Use
  $inetutils/bin/ifconfig, not $inetutils/sbin/ifconfig.
2014-05-04 21:09:29 +02:00
Ludovic Courtès 0e2672aee3 gnu: Add missing import in (gnu packages maths).
* gnu/packages/maths.scm: Use (guix utils), which was needed since
  b9100e2f.
2014-05-04 11:15:30 +02:00
Ludovic Courtès 3c05b4bc25 linux-initrd: Check the root and other early file systems.
* gnu/system.scm (operating-system-derivation)[boot-file-systems]: Keep "/".
* gnu/system/linux-initrd.scm (file-system->spec): Keep the 'check?'
  flag.
  (qemu-initrd)[helper-packages]: New variable.  Pass it as #:to-copy.
  <gexp>: Add 'set-path-environment-variable' call.  Remove #:unionfs
  argument for 'boot-system'.
* gnu/system/vm.scm (%linux-vm-file-systems): Add 'check?' field/
  (virtualized-operating-system): Likewise for the "9p" file system.
* guix/build/linux-initrd.scm (mount-root-file-system): Change #:unionfs
  default.  Call 'check-file-system' before mounting ROOT, when
  VOLATILE-ROOT? is false.
  (check-file-system): New procedure.
  (mount-file-system): Honor 'check?' element in list; add
  'check-file-system' call.
  (boot-system): Remove #:root-fs-type and #:unionfs parameters.
  [root-mount-point?, root-fs-type]: New variables.
  Call 'mount-file-system' on all MOUNTS but "/".
2014-05-04 00:30:39 +02:00
Ludovic Courtès ad896f23a5 activation: Fix deletion of setuid programs.
* guix/build/activation.scm (activate-setuid-programs): When
  %SETUID-DIRECTORY exists, pass the right file names to 'delete-file'.
2014-05-04 00:18:46 +02:00
Ludovic Courtès e102f94097 gnu: Add statically-linked versions of e2fsprogs and the fsck.* commands.
* gnu/packages/linux.scm (e2fsprogs/static, e2fsck/static): New
  variables.
2014-05-03 16:37:04 +02:00
Ludovic Courtès 66f23d6621 vm: Provide a root partition for the freestanding VM image.
Fixes a regression introduced in 83bcd0b.

* gnu/system/vm.scm (system-qemu-image): Override the 'file-systems'
  field of OS.  Add #:file-system-type parameter and honor it.
2014-05-03 12:46:09 +02:00
Ludovic Courtès 03ddfaf5fb vm: Make root file system type a parameter, and default to ext4.
* gnu/system/vm.scm (qemu-image): Add #:file-system-type parameter.
  Pass it to 'initialize-hard-disk'.
* guix/build/linux-initrd.scm (mount-root-file-system): Always honor
  TYPE.
  (boot-system): Change #:root-fs-type to default to "ext4".  Update
  docstring.
* guix/build/vm.scm (initialize-hard-disk): Remove #:mkfs parameter; add
  #:file-system-type.  Adjust 'mkfs' invocation and 'mount' call to
  honor #:file-system-type.
2014-05-03 12:16:23 +02:00
Ludovic Courtès e20fd1bf80 doc: Minor improvements in "G-Expressions".
* doc/guix.texi (G-Expressions): Show coreutils version number in store
  file name.  Add xref to "Derivations", in documentation of
  'gexp->derivation'.  Fix typo.
2014-05-03 12:02:43 +02:00
Ludovic Courtès 83a39ed7db gnu: Add diffstat.
* gnu/packages/version-control.scm (diffstat): New variable.
2014-05-03 00:46:51 +02:00
Ludovic Courtès 3c986b75f5 ftp-client: Add missing CR in "USER" command.
* guix/ftp-client.scm (%ftp-login): Add #\return before #\newline.
  Fixes access to some FTP servers, such as
  ftp://invisible-island.net ("ProFTPD 1.3.4a Server").
2014-05-03 00:46:51 +02:00
Ludovic Courtès 83bcd0b895 system: Add first-class file system declarations.
* gnu/system.scm (<operating-system>)[initrd]: Default to
  'qemu-initrd'.
  (<file-system>): New record type.
  (operating-system-root-file-system): New procedure.
  (operating-system-derivation): Take the device name for GRUB from
  'operating-system-root-file-system'.  Pass the
  'operating-system-initrd' procedure the list of boot file systems.
* gnu/system/linux-initrd.scm (file-system->spec): New procedure.
  (qemu-initrd): Add 'file-systems' parameter, and remove #:mounts
  parameter.
  [file-system-type-predicate]: New procedure.
  [linux-modules]: Use it.
  Adjust #:mounts argument in 'boot-system' call.
  (gnu-system-initrd): Remove.
* gnu/system/vm.scm (%linux-vm-file-systems): New variable.
  (expression->derivation-in-linux-vm): Adjust call to 'qemu-initrd'.
  (virtualized-operating-system): New procedure.
  (system-qemu-image/shared-store-script)[initrd]: Remove.  Use
  'virtualized-operating-system'.  Get the 'initrd' file from OS-DRV.
* guix/build/linux-initrd.scm (mount-qemu-smb-share, mount-qemu-9p):
  Remove.
  (MS_RDONLY, MS_BIND): New global variables.
  (bind-mount): Remove local 'MS_BIND' definition.
  (mount-root-file-system): New procedure, with code formerly in
  'boot-system'.
  (mount-file-system): New procedure.
  (boot-system): Add #:root-fs-type parameter.  Remove 'MS_RDONLY' local
  variable.  Use 'mount-root-file-system' and 'mount-file-system'.
* doc/guix.texi (Using the Configuration System): Add 'file-system'
  declaration.
2014-05-03 00:46:51 +02:00
Eric Bavier f5d5a346db gnu: Add missing copyright line
* gnu/packages/maths.scm: Add copyright line missing from 3de01d3.
2014-05-02 14:25:17 -05:00
Eric Bavier f258212df5 gnu: petsc: Add input superlu.
* gnu/packages/maths.scm (petsc): Configure with superlu support.
2014-05-02 14:25:17 -05:00
Eric Bavier 183e44ae44 gnu: Add superlu
* gnu/packages/maths.scm (superlu): New variable
2014-05-02 14:25:17 -05:00
Ludovic Courtès 6ab6ca4c9a gnu: qemu: Upgrade to 2.0.0.
* gnu/packages/qemu.scm (qemu-headless): Upgrade to 2.0.0.
2014-05-01 22:31:36 +02:00
Ludovic Courtès 6f8f8ccb5b download: Rewrite using gexps.
* guix/download.scm (gnutls-derivation): Remove.
  (gnutls-package): New procedure.
  (url-fetch): Rewrite using 'gexp->derivation'.
2014-05-01 22:31:36 +02:00
Ludovic Courtès 53e89b1732 monads, gexp: Remove unintended dependency on (gnu packages …).
* guix/gexp.scm (gexp->derivation, gexp->script): Use 'default-guile'
  instead of an explicit reference to 'guile-final'.
  (default-guile): New procedure.
* guix/monads.scm (run-with-store)[default-guile]: New procedure.
  Use it.
2014-05-01 22:31:36 +02:00
Ludovic Courtès 79c0c8cdf7 gexp: Add support for 'origin?' objects in 'ungexp' forms.
* guix/gexp.scm (lower-inputs, gexp-inputs, gexp->sexp,
  canonicalize-reference): Add 'origin?' case.
* guix/monads.scm (origin->derivation): New procedure.
* tests/gexp.scm ("one input origin"): New test.
2014-05-01 22:31:36 +02:00
Ludovic Courtès 696893801c system: Add 'sudo' to the setuid programs, and handle /etc/sudoers.
* gnu/system.scm (<operating-system>)[groups]: Change default to just
  the 'root' group.
  [sudoers]: New field.
  (etc-directory): Add #:sudoers parameter.  Add 'sudoers' to the
  file union.
  (operating-system-etc-directory): Pass #:sudoers to 'etc-directory'.
  (%setuid-programs): Add 'sudo'.
  (%sudoers-specification): New variable.
* gnu/system/linux.scm (base-pam-services): Add 'sudo'.
* build-aux/hydra/demo-os.scm: Add 'groups' field; add 'guest' to the
  'wheel' group.
2014-05-01 22:31:36 +02:00
Eric Bavier b9100e2f11 gnu: Add petsc
* gnu/packages/maths.scm (petsc): New variable.
  (petsc-complex): New variable.
* gnu/packages/patches/petsc-fix-threadcomm.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-01 15:27:30 -05:00
David Thompson 3da5dca34c gnu: Add abbaye.
* gnu/packages/games.scm (abbaye): New variable.
2014-05-01 07:44:45 -04:00