Commit Graph

21243 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice 101e67ac20
gnu: vpnc: Use newer vpnc-scripts.
* gnu/packages/vpn.scm (vpnc)[source]: Remove patch.
[inputs]: Remove net-tools and iproute2.  Add vpnc-scripts.
[arguments]: Delete ‘configure’ and ‘wrap-vpnc-script’ #:phases.
Add ‘use-store-paths’ phase.
* gnu/packages/patches/vpnc-script.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-29 16:08:36 +01:00
Tobias Geerinckx-Rice 06d91fd944
gnu: Add vpnc-scripts.
* gnu/packages/vpn.scm (vpnc-scripts): New variable.
2017-11-29 16:08:36 +01:00
Mathieu Othacehe 56f0feb678
gnu: grub: Disable tests on ARM platforms.
* gnu/packages/bootloaders (grub): Disable tests on ARM platforms.
Half of the tests are failing on ARM.
2017-11-29 15:00:55 +01:00
Roel Janssen 1fd904fb38
gnu: Update r-mutationalpatterns to 1.4.1.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.4.1.
2017-11-29 14:56:28 +01:00
Tobias Geerinckx-Rice 60c8a14b8a
gnu: ghc-tasty-rerun: Update to 1.1.7.
* gnu/packages/haskell-check.scm (ghc-tasty-rerun): Update to 1.1.7.
2017-11-29 13:42:06 +01:00
Tobias Geerinckx-Rice d5feb0920e
gnu: limnoria: Update to 2017.10.01.
* gnu/packages/irc.scm (limnoria): Update to 2017.10.01.
2017-11-29 13:38:31 +01:00
Marius Bakke b3e53aae08
gnu: libxfont@1: Update to 1.5.4 [fixes CVE-2017-16611].
* gnu/packages/xorg.scm (libxfont): Update to 1.5.4.
2017-11-29 12:53:08 +01:00
Marius Bakke 1ec0b7407f
gnu: libxfont@2: Update replacement to 2.0.3 [fixes CVE-2017-16611].
* gnu/packages/xorg.scm (libxfont2/fixed): Rename to ...
(libxfont2-2.0.3): ... this.  Make public.
[version]: New field.
[source]: Add URI and SHA256.  Remove patches.
(libxfont2)[replacement]: Change LIBXFONT2/FIXED to LIBXFONT2-2.0.3.
* gnu/packages/patches/libxfont-CVE-2017-13720.patch,
gnu/packages/patches/libxfont-CVE-2017-13722.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-11-29 12:53:08 +01:00
Marius Bakke 4fc61dac3c
gnu: libxcursor: Replace with 1.1.15 [fixes CVE-2017-16612].
* gnu/packages/xorg.scm (libxcursor-1.1.15): New public variable.
(libxcursor)[replacement]: New field.
2017-11-29 12:53:08 +01:00
Marius Bakke 0e7fb0cd9b
gnu: optipng: Fix CVE-2017-1000229.
* gnu/packages/image.scm (optipng)[source](patches): New field.
* gnu/packages/patches/optipng-CVE-2017-1000229.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-11-29 12:53:08 +01:00
Roel Janssen efa6a1ddb5
gnu: Add r-copynumber.
* gnu/packages/bioinformatics.scm (r-copynumber): New variable.
2017-11-29 12:46:17 +01:00
Roel Janssen 94989d4bae
gnu: cran: Add r-rmpi.
* gnu/packages/cran.scm (r-rmpi): New variable.
2017-11-29 12:15:33 +01:00
Leo Famulari 3519f2841d
gnu: libtorrent-rasterbar: Update to 1.1.4.
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.4.
[source]: Remove 'libtorrent-rasterbar-boost-compat.patch'.
* gnu/packages/patches/libtorrent-rasterbar-boost-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-11-29 01:12:18 -05:00
Ben Sturmfels d2bdee8a69
gnu: synergy: Fix install test/install error.
* gnu/packages/synergy.scm (synergy)[arguments]: Adjust the build directory in
accordance with the package's new upstream name.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 18:26:20 -05:00
Leo Famulari 48adc61c14
gnu: exim: Fix CVE-2017-16944.
* gnu/packages/patches/exim-CVE-2017-16944.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (exim)[source]: Use it.
2017-11-28 18:22:49 -05:00
Leo Famulari 38faa2b546
gnu: qemu: Fix CVE-2017-{15118,15119}.
* gnu/packages/patches/qemu-CVE-2017-15118.patch,
gnu/packages/patches/qemu-CVE-2017-15119.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
2017-11-28 18:16:22 -05:00
Ludovic Courtès 3af03e5967
services: certbot: Add default value and description.
* gnu/services/certbot.scm (certbot-service-type)
[default-value, description]: New fields.
* po/packages/POTFILES.in: Add it.
2017-11-28 23:34:25 +01:00
Ludovic Courtès a222b734b3
services: cgit, git-daemon: Add description and default value.
* gnu/services/version-control.scm (git-daemon-service-type)
[description, default-value]: New fields.
(cgit-service-type)[default-value]: New field.
* po/packages/POTFILES.in: Add version-control.scm.
2017-11-28 23:34:25 +01:00
Ludovic Courtès 87dad874c9
tests: Add 'git-http' test.
* gnu/tests/version-control.scm (%git-nginx-configuration)
(%git-http-os, %test-git-http): New variables.
(run-git-http-test): New procedure.
2017-11-28 23:34:25 +01:00
Ludovic Courtès e755692bc1
tests: cgit: Add a file to the test repository.
* gnu/tests/version-control.scm (README-contents): New variable.
(%make-git-repository): Add a 'README' file to the repo.
(%test-repository-service): New variable.
(%cgit-os): Use it.
(run-cgit-test): Test /test/tree/README and /test/tree/does-not-exist.
2017-11-28 23:34:25 +01:00
Andy Wingo 410349347a
services: Add Git HTTP(S) service support.
* doc/guix.texi (Version Control Services): Add documentation on the HTTP
backend for git.
* gnu/services/version-control.scm (<git-http-configuration>): New data type.
(git-http-nginx-location-configuration): New helper function.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 23:34:25 +01:00
Andy Wingo 1115f14017
services: Add certbot service.
* gnu/services/certbot.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* doc/guix.texi (Certificate Services): New section.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 23:34:24 +01:00
Ludovic Courtès f612992999
build: Add missing patch.
This is a followup to 797d238789.

* gnu/local.mk (dist_patch_DATA): Add
'node-test-http2-server-rst-stream.patch'.
2017-11-28 23:34:24 +01:00
ng0 20d2c6e749
gnu: Add nototools.
* gnu/packages/fontutils.scm (nototools): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:55:13 -05:00
ng0 3715aff59b
gnu: Add python2-defcon.
* gnu/packages/fontutils.scm (python2-defcon): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:52:58 -05:00
ng0 76040f71f1
gnu: Add python2-booleanoperations.
* gnu/packages/python.scm (python2-booleanoperations): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:51:45 -05:00
ng0 a39211febd
gnu: Add python-pyclipper.
* gnu/packages/python.scm (python-pyclipper, python2-pyclipper): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:49:08 -05:00
ng0 9b3c7520eb
gnu: Add python-setuptools-scm-git-archive.
* gnu/packages/python.scm (python-setuptools-scm-git-archive,
python2-setuptools-scm-git-archive): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:49:07 -05:00
ng0 427a51fd8f
gnu: Add python2-ufolib.
* gnu/packages/fontutils.scm (python2-ufolib): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:40:43 -05:00
ng0 0ee27df06b
gnu: add font-fira-sans.
* gnu/packages/fonts.scm (font-fira-sans): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:26:20 -05:00
ng0 4eb4742060
gnu: Add font-lato.
* gnu/packages/fonts.scm (font-lato): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:22:28 -05:00
ng0 27a1077580
gnu: Add font-dosis.
* gnu/packages/fonts.scm (font-dosis): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 14:18:25 -05:00
Leo Famulari 4440e40c6a
gnu: zsh: Update to 5.4.2.
* gnu/packages/shells.scm (zsh): Update to 5.4.2.
[arguments]: Add a 'patch-test' build phase.
2017-11-28 13:52:36 -05:00
Rutger Helling fbf5ca3c5e
gnu: libressl: Update to 2.6.3.
* gnu/packages/tls.scm (libressl): Update to 2.6.3.
2017-11-28 13:50:04 -05:00
Rutger Helling 142535c3c2
gnu: you-get: Update to 0.4.985.
* gnu/packages/video.scm (you-get): Update to 0.4.985.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-28 13:50:03 -05:00
Oleg Pykhalov 2cdf78df2d
gnu: python-internetarchive: Enable tests.
* gnu/packages/web.scm (python-internetarchive): Enable tests.
2017-11-28 20:23:46 +03:00
Oleg Pykhalov 25fa22a99b
gnu: python-internetarchive: Update to 1.7.4.
* gnu/packages/web.scm (python-internetarchive): Update to 1.7.4.
2017-11-28 20:23:46 +03:00
Ludovic Courtès e463a94ce7
gnu: guix: Update snapshot to 0a154c1.
* gnu/packages/package-management.scm (guix): Update to commit 0a154c1.
2017-11-28 18:17:45 +01:00
Oleg Pykhalov a6d02fc168
gnu: Add eless.
* gnu/packages/emacs.scm (eless): New variable.
2017-11-28 20:13:48 +03:00
Kei Kebreau 07f3b3794c
gnu: Add roguebox-adventures.
* gnu/packages/games.scm (roguebox-adventures): New variable.
2017-11-28 09:54:13 -05:00
Ludovic Courtès 1da3d2a3a1
gnu: perl-markdown-discount: Use a shorter patch file name.
* gnu/packages/patches/perl-text-markdown-discount-use-system-markdown.patch:
Rename to...
* gnu/packages/patches/perl-text-markdown-discount-unbundle.patch:
... this.
* gnu/packages/markup.scm (perl-text-markdown-discount): Adjust accordingly.
2017-11-28 14:57:16 +01:00
Ludovic Courtès dd1640eed6
gnu: guix: Add guile-bytestructures to the search path.
* gnu/packages/package-management.scm (guix)[arguments]: In
'wrap-program' phase, add guile-bytestructures to the path.
2017-11-28 13:29:47 +01:00
Ludovic Courtès 91c619ebdf
gnu: guix: Provide the correct version string.
Fixes <https://bugs.gnu.org/29429>.
Reported by Arun Isaac <arunisaac@systemreboot.net>.

* gnu/packages/package-management.scm (guix)[arguments]: Move
'bootstrap' phase before 'configure'.  Create '.tarball-version' file.
2017-11-28 13:25:04 +01:00
Ludovic Courtès 65c0f43649
services: xorg: Remove WindowMaker as a default fallback.
* gnu/services/xorg.scm (xinitrc)[builder](system-profile)
(user-profile): New variables.
(xsession-command, find-session): New procedures.
When FALLBACK-SESSION is #f, find a valid session at run time.
* doc/guix.texi (X Window): Adjust accordingly, and insist that one
or more window managers must be installed.
2017-11-28 11:24:46 +01:00
Ludovic Courtès b37f86d7a3
services: xorg: Document 'slim-configuration' and deprecate 'slim-service'.
* gnu/services/xorg.scm (<slim-configuration>): Provide default values
for all fields.
(slim-service-type)[default-value]: New field.
* doc/guix.texi (X Window): Remove 'slim-service' documentation.
Document 'slim-service-type' and 'slim-configuration'.
* gnu/services/desktop.scm (%desktop-services): Use 'slim-service-type'.
2017-11-28 11:24:45 +01:00
Ludovic Courtès 94b9abd942
services: slim: Remove unused 'bash' configuration field.
* gnu/services/xorg.scm (<slim-configuration>)[bash]: Remove.
(slim-service): Adjust accordingly.
2017-11-28 11:14:25 +01:00
Ludovic Courtès d344f5a528
services: xorg: Allow users to specify a list of modules.
* gnu/services/xorg.scm (%default-xorg-fonts): New variable.
(xorg-configuration-file): Add #:modules and #:fonts.  Rewrite to return
a 'computed-file' that honors MODULES and FONTS.
(xorg-wrapper): Pass #:modules to 'xorg-configuration-file'.
(xorg-start-command): Add #:fonts.  Pass #:fonts and #:modules to
'xorg-configuration-file'.
* doc/guix.texi (X Window): Adjust documentation of 'xorg-start-command'
and 'xorg-configuration-file'.
2017-11-28 10:46:03 +01:00
Brendan Tildesley 04c3573726
gnu: xdg-utils: Add perl-file-mimeinfo as an input.
* gnu/packages/freedesktop.scm (perl-file-mimeinfo)
[input]: Add perl-file-mimeinfo.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 10:41:22 +01:00
Brendan Tildesley d0ce96bc17
gnu: Add perl-file-mimeinfo.
* gnu/packages/freedesktop.scm (perl-file-mimeinfo): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 10:40:45 +01:00
Brendan Tildesley 825cebdb33
gnu: Add perl-file-desktopentry.
* gnu/packages/freedesktop.scm (perl-file-desktopentry): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 10:35:29 +01:00
Brendan Tildesley b32596ecfc
gnu: Add perl-file-basedir.
* gnu/packages/freedesktop.scm: (perl-file-basedir): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 10:33:59 +01:00
Mike Gerwitz 797d238789
gnu: node: Update to 8.9.1.
* gnu/packages/node.scm (node): Update to 8.9.1.
[source]: Apply 'node-test-http2-server-rst-stream.patch'.
[arguments]: Skip 'doc-only' target in 'check', which attempts to use
npm to retrieve 'js-yaml' package.  Remove test/doctool/test-make-doc.js.
Do not remove now-missing test case.  Remove new test case that fails in
containers due to networking.
* gnu/packages/patches/node-test-http2-server-rst-stream.patch: New file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-11-28 10:04:26 +01:00
Efraim Flashner ff6dcc1ae9
gnu: libmicrohttpd: Update to 0.9.57.
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.57.
[description]: Fix line breaks.
2017-11-28 09:38:27 +02:00
Efraim Flashner 62028e9125
gnu: nano: Update to 2.9.1.
* gnu/packages/nano.scm (nano): Update to 2.9.1.
2017-11-28 09:38:24 +02:00
Clément Lassieur 769e715508
gnu: emacs-org-contrib: Fix sha256 checksum due to emacs-org update.
* gnu/packages/emacs.scm (emacs-org-contrib)[source]: Fix sha256 checksum.
2017-11-28 03:49:47 +01:00
Clément Lassieur 19ff1f2687
services: configuration: Show default values of list types.
* doc/guix.texi (Messaging Services): Regenerate it.
* gnu/services/configuration.scm (show-default?): Check VAL rather than DEFAULT.
* gnu/services/messaging.scm (show-default?): Check VAL rather than DEFAULT.
(prosody-configuration)[modules-enabled]: Remove default value from docstring.
2017-11-28 03:49:47 +01:00
Clément Lassieur 149b2c439e
gnu: lua-lpeg: Avoid code repetition.
* gnu/packages/lua.scm (make-lua-lpeg): New procedure.
(lua-lpeg, lua5.2-lpeg): Call make-lua-lpeg.
2017-11-28 03:49:47 +01:00
ng0 1aace3dc34
gnu: gnurl: Update to 7.56.1-2.
* gnu/packages/gnunet.scm (gnurl): Update to 7.56.1-2.
[arguments]: Adjust the #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-27 15:49:17 -05:00
Efraim Flashner aad2dbfb6c
gnu: Add vim-fugitive.
* gnu/packages/vim.scm (vim-fugitive): New variable.
2017-11-27 22:26:17 +02:00
Efraim Flashner b200ecdeb2
gnu: Add gama.
* gnu/packages/gps.scm (gama): New variable.
2017-11-27 22:18:27 +02:00
Christopher Baines 03800de180
gnu: Patch udisks to directly reference cryptsetup and parted.
This fixes some functionality in gnome-disks, which uses udisks. Adding
cryptsetup enables creating partitions using LUKS, and adding parted enables
editing the partition tables through the disks application.

* gnu/packages/freedesktop.scm (udisks)[inputs]: Add cryptsetup and parted.
  (arguments): Rename set-mount-file-name phase, and add cryptsetup and
  parted.
2017-11-27 19:41:17 +00:00
Christopher Baines 5823396404
services: desktop: Create /var/run/udisks2 for the udisks service.
* gnu/services/desktop.scm (%udisks-activation): New variable.
  (udisks-service-type)[extensions]: Extend the activation service type with
  %udisks-activation.
2017-11-27 19:41:13 +00:00
Leo Famulari 080e023d45
gnu: openntpd: Enable use of TLS-based time constraints.
* gnu/packages/ntp.scm (openntpd)[inputs]: Add libressl.
2017-11-27 13:29:18 -05:00
Vasile Dumitrascu 12a130b011
gnu: monero-core: Update to 0.11.1.0.
* gnu/packages/finance.scm (monero-core): Update to 0.11.1.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-27 12:56:36 -05:00
Vasile Dumitrascu 14e09e9039
gnu: monero: Update to 0.11.1.0.
* gnu/packages/finance.scm (monero): Update to 0.11.1.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-27 12:56:33 -05:00
Tobias Geerinckx-Rice 7832785def
gnu: steghide: Fix description.
* gnu/packages/image.scm (steghide)[description]: Remove typos and improve
grammar.
2017-11-27 17:07:12 +01:00
Tobias Geerinckx-Rice 778c4a2fa1
gnu: rhythmbox: Update to 3.4.2.
* gnu/packages/gnome.scm (rhythmbox): Update to 3.4.2.
2017-11-27 17:06:26 +01:00
Tobias Geerinckx-Rice 47aba9ddc9
gnu: libgweather: Update to 3.26.1.
* gnu/packages/gnome.scm (libgweather): Update to 3.26.1.
2017-11-27 17:06:25 +01:00
Tobias Geerinckx-Rice ac25f5972d
gnu: glade@3: Update to 3.20.2.
* gnu/packages/gnome.scm (glade3): Update to 3.20.2.
2017-11-27 17:06:25 +01:00
Tobias Geerinckx-Rice 26ff9cb370
gnu: libzip: Run all tests.
* gnu/packages/compression.scm (libzip)[arguments]: Delete
‘remove-failing-stest’ phase.
2017-11-27 16:16:20 +01:00
Tobias Geerinckx-Rice 18533bcf2d
gnu: borg: Use new borgbackup.org home page.
* gnu/packages/backup.scm (borg)[home-page]: Update.
2017-11-27 14:12:25 +01:00
Tobias Geerinckx-Rice b46ea394a4
gnu: python-prompt-toolkit: Update to 1.0.15.
* gnu/packages/python.scm (python-prompt-toolkit): Update to 1.0.15.
2017-11-27 14:12:25 +01:00
Tobias Geerinckx-Rice 8fab029dbc
gnu: python-pyicu: Update home page.
* gnu/packages/python.scm (python-pyicu)[home-page]: Update.
2017-11-27 14:12:24 +01:00
Tobias Geerinckx-Rice d152d9338f
gnu: python-pyicu: Update to 1.9.8.
* gnu/packages/python.scm (python-pyicu): Update to 1.9.8.
[arguments]: Delete.
[native-inputs]: Add python-pytest and python-six.
2017-11-27 14:12:24 +01:00
Tobias Geerinckx-Rice 36c5cf758c
gnu: rapicorn: Update home page.
* gnu/packages/graphics.scm (rapicorn)[home-page]: Use extant domain.
2017-11-27 14:12:24 +01:00
Tobias Geerinckx-Rice 5f169014ec
gnu: borg: Update to 1.1.3 [fixes CVE-2017-15914].
* gnu/packages/backup.scm (borg): Update to 1.1.3.
[arguments]: Skip ‘test_mount_hardlinks’ test.
2017-11-27 14:12:23 +01:00
Tobias Geerinckx-Rice 216614a4b3
gnu: youtube-dl: Update to 2017.11.26.
* gnu/packages/video.scm (youtube-dl): Update to 2017.11.26.
2017-11-27 14:12:23 +01:00
Ludovic Courtès e8374e6912
gnu: guile-wisp: Move .go files to 'lib/guile/2.2/site-ccache'.
* gnu/packages/guile.scm (guile-wisp)[arguments]: Remove (system base
compile) from #:modules, and (ice-9 rdelim) and (ice-9 popen).
In 'install-go-files' phase, invoke 'guild' to compile, and write to
lib/guile/X.Y/site-ccache.
2017-11-27 14:06:27 +01:00
Ludovic Courtès 89c4bfe7f8
gnu: guile-wisp: Switch to Guile 2.2.
* gnu/packages/guile.scm (guile-wisp)[inputs]: Use GUILE-2.2 instead of
GUILE-2.0.
2017-11-27 14:05:58 +01:00
Ludovic Courtès e084090554
gnu: guile-wisp: Update to 0.9.8.
* gnu/packages/guile.scm (guile-wisp): Update to 0.9.8.
[inputs]: Remove PYTHON.
[native-inputs]: New field.
[arguments]: Keep 'install' phase.  Add 'install-go-files' phase.
Adjust 'substitute-before-config' phase.
2017-11-27 14:05:58 +01:00
Ricardo Wurmus 776d2fb1bf
gnu: Add java-jbzip2.
* gnu/packages/compression.scm (java-jbzip2): New variable.
2017-11-27 12:12:41 +01:00
Ricardo Wurmus d7f24778de
gnu: Add java-picard-1.113.
* gnu/packages/bioinformatics.scm (java-picard-1.113): New variable.
2017-11-27 12:12:41 +01:00
Ricardo Wurmus fa6c4213c6
gnu: Add ant-junit.
* gnu/packages/java.scm (ant-junit): New variable.
2017-11-27 12:12:41 +01:00
Ricardo Wurmus 9ce7ac992e
gnu: Add ant-apache-bcel.
* gnu/packages/java.scm (ant-apache-bcel): New variable.
2017-11-27 12:12:41 +01:00
Ricardo Wurmus 5e3abfc83f
gnu: Add java-commons-bcel.
* gnu/packages/java.scm (java-commons-bcel): New variable.
2017-11-27 12:12:41 +01:00
Ricardo Wurmus c5ff11dcc1
gnu: Add java-cofoja.
* gnu/packages/java.scm (java-cofoja): New variable.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus d7fed31ad2
gnu: Add java-picard.
* gnu/packages/bioinformatics.scm (java-picard): New variable.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus bd94b6f850
gnu: java-htsjdk: Update to 2.3.0.
* gnu/packages/bioinformatics.scm (java-htsjdk): Update to 2.3.0.
[arguments]: Build with JDK 8.
[inputs]: Add java-ngs, java-snappy, java-commons-compress,
java-commons-logging-minimal, java-commons-jexl-2, and java-xz.
[native-inputs]: Add java-testng.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus 9e325e8c05
gnu: Add java-commons-jexl-2.
* gnu/packages/java.scm (java-commons-jexl-2): New variable.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus 6688c41e16
gnu: Add javacc-4.
* gnu/packages/java.scm (javacc-4): New variable.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus fc8d100b24
gnu: Add javacc.
* gnu/packages/java.scm (javacc): New variable.
2017-11-27 12:12:40 +01:00
Ricardo Wurmus 933ad809f1
gnu: Add java-snappy-1.
* gnu/packages/compression.scm (java-snappy-1): New variable.
2017-11-27 12:12:39 +01:00
Ricardo Wurmus 9cc51d16cb
gnu: librecad: Ensure that icons are found at runtime.
* gnu/packages/engineering.scm (librecad)[arguments]: Add phase
"wrap-executable".
2017-11-27 12:11:58 +01:00
Ricardo Wurmus 35e78aaa25
gnu: r-rhdf5: Fix build phase.
* gnu/packages/bioinformatics.scm (r-rhdf5)[arguments]: Fix "unpack-smallhdf5"
phase.
2017-11-27 12:11:52 +01:00
Leo Famulari 9071581bf5
gnu: shotwell: Update to 0.27.1.
* gnu/packages/gnome.scm (shotwell): Update to 0.27.1.
2017-11-26 19:34:43 -05:00
ng0 f953aa56cc
gnu: fish-guix: Use new URL.
* gnu/packages/shells.scm (fish-guix)[source]: Use new URL.
(home-page): Use new URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26 18:21:19 -05:00
ng0 66e47916d4
gnu: python-pycanberra: Switch to new download URL.
* gnu/packages/libcanberra.scm (python-pycanberra)[source]: Use new URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26 18:21:19 -05:00
nee 6438a4682d
gnu: crawl: Update to 0.20.1.
* gnu/packages/games.scm (crawl): Update to 0.20.1.
(crawl-tiles): Update to 0.20.1.
[native-inputs]: Add pngcrush.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-11-26 17:52:24 -05:00
Efraim Flashner 6dbad376a2
gnu: openntpd: Update to 6.2p3.
* gnu/packages/ntp.scm (openntpd): Update to 6.2p3.
2017-11-26 22:33:18 +02:00
Leo Famulari 5b327a2d61
gnu: exim: Fix CVE-2017-16943.
* gnu/packages/patches/exim-CVE-2017-16943.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (exim)[source]: Use it.
2017-11-26 15:31:46 -05:00