8de0e90bc0
gnu: perl-json: Update to 4.02.
...
* gnu/packages/perl.scm (perl-json): Update to 4.02.
2019-03-23 00:11:15 +01:00
ce5b81f72b
gnu: perl-time-hires: Update to 1.9760.
...
* gnu/packages/perl.scm (perl-time-hires): Update to 1.9760.
2019-03-23 00:11:14 +01:00
9682821a32
gnu: perl-business-issn: Update to 1.003.
...
* gnu/packages/perl.scm (perl-business-issn): Update to 1.003.
2019-03-23 00:11:14 +01:00
a6e5970efc
gnu: perl-time-duration: Update to 1.20.
...
* gnu/packages/perl.scm (perl-time-duration): Update to 1.20.
2019-03-23 00:11:14 +01:00
d098f40ae2
gnu: perl-text-template: Update to 1.55.
...
* gnu/packages/perl.scm (perl-text-template): Update to 1.55.
2019-03-23 00:11:13 +01:00
0d344f3007
gnu: perl-moosex-role-withoverloading: Update to 0.17.
...
* gnu/packages/perl.scm (perl-moosex-role-withoverloading): Update to 0.17.
2019-03-23 00:11:13 +01:00
218decd717
gnu: perl-carp-assert-more: Update to 1.16.
...
* gnu/packages/perl.scm (perl-carp-assert-more): Update to 1.16.
2019-03-23 00:11:13 +01:00
6a9cecd553
gnu: perl-template-toolkit: Update to 2.28.
...
* gnu/packages/perl.scm (perl-template-toolkit): Update to 2.28.
2019-03-23 00:11:12 +01:00
836aec9984
gnu: perl-carp-clan: Update to 6.07.
...
* gnu/packages/perl.scm (perl-carp-clan): Update to 6.07.
2019-03-23 00:11:12 +01:00
612f11bbc5
gnu: perl-devel-checkbin: Update to 0.04.
...
* gnu/packages/perl.scm (perl-devel-checkbin): Update to 0.04.
2019-03-23 00:11:12 +01:00
b94a35326b
gnu: perl-datetime-format-builder: Update to 0.82.
...
* gnu/packages/perl.scm (perl-datetime-format-builder): Update to 0.82.
2019-03-23 00:11:12 +01:00
695da62896
gnu: perl-unicode-normalize: Update to 1.26.
...
* gnu/packages/perl.scm (perl-unicode-normalize): Update to 1.26.
2019-03-23 00:11:11 +01:00
c3064aa1ba
gnu: perl-pegex: Update to 0.70.
...
* gnu/packages/perl.scm (perl-pegex): Update to 0.70.
2019-03-23 00:11:11 +01:00
1a3f4684a5
gnu: perl-yaml: Update to 1.27.
...
* gnu/packages/perl.scm (perl-yaml): Update to 1.27.
2019-03-23 00:11:11 +01:00
d5b5d5826c
gnu: perl-uri-escape: Update to 1.76.
...
* gnu/packages/perl-web.scm (perl-uri-escape): Update to 1.76.
2019-03-23 00:11:10 +01:00
b0842a8e08
gnu: perl-webservice-musicbrainz: Update to 1.0.5.
...
* gnu/packages/music.scm (perl-webservice-musicbrainz): Update to 1.0.5.
2019-03-23 00:11:10 +01:00
48c5e0cb84
gnu: perl-software-license: Update to 0.103014.
...
* gnu/packages/license.scm (perl-software-license): Update to 0.103014.
2019-03-23 00:11:10 +01:00
35e4e3597f
gnu: perl-lingua-en-tagger: Update to 0.30.
...
* gnu/packages/language.scm (perl-lingua-en-tagger): Update to 0.30.
2019-03-23 00:11:09 +01:00
6023ecab57
gnu: bind: Return #T from all phases.
...
* gnu/packages/dns.scm (isc-bind)[arguments]: Move #T from ‘check’ to ‘move-to-utils’ phase.
2019-03-23 00:11:09 +01:00
d349e6d9a8
gnu: vlc: Remove obsolete patches.
...
* gnu/packages/video.scm (vlc)[arguments]: Remove obsolete Qt 5.11 changes in
'patch-source' phase.
2019-03-22 18:16:45 -04:00
10384f880a
gnu: VLC: Fix build with libssh2 > 1.8.0.
...
* gnu/packages/video.scm (vlc)[arguments]: Adjust the faulty libssh2 feature
detection macro.
2019-03-22 18:16:42 -04:00
1b17c23ebc
gnu: Add xl2tpd.
...
* gnu/packages/vpn.scm (xl2tpd): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-22 22:49:35 +01:00
0dc7d298a3
vm: 'system-docker-image' calls 'sync' before rebooting.
...
Previously we could end up silently building truncated tarballs.
* gnu/system/vm.scm (system-docker-image)[build]: Add call to 'sync'.
2019-03-22 22:49:35 +01:00
ac3c14fb07
system: Fix misleading comments.
...
* gnu/system.scm (<operating-system>)[skeletons, services]: Fix
misleading type comments.
2019-03-22 22:49:35 +01:00
c6e775a875
gnu: tlp: Update to 1.2.1.
...
* gnu/packages/linux.scm (tlp): Update to 1.2.1.
2019-03-22 19:12:34 +01:00
813f866a90
gnu: emacs-xr: Update to 1.9.
...
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.9.
2019-03-22 18:42:26 +01:00
fdfaba9032
gnu: Add starlong.
...
* gnu/packages/bioinformatics.scm (starlong): New variable.
2019-03-22 16:17:01 +01:00
70d6a61424
gnu: parallel: Update to 20190322.
...
* gnu/packages/parallel.scm (parallel): Update to 20190322.
2019-03-22 16:02:17 +01:00
9716f62119
gnu: claws-mail: Enable LDAP support.
...
* gnu/packages/mail.scm (claws-mail)[arguments]: Add "--enable-ldap" to
configure flags.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-22 14:42:09 +01:00
b97df9e570
gnu: graphicsmagick: Update to 1.3.31.
...
* gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.31.
2019-03-22 13:06:59 +01:00
304ed82c53
gnu: graphicsmagick: Don't use NAME in source URI.
...
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Hard-code NAME.
2019-03-22 13:06:59 +01:00
6a715a00d3
gnu: libgit2: Add comments.
...
* gnu/packages/patches/libgit2-avoid-python.patch: Add comments.
2019-03-22 12:00:08 +01:00
6f99fb5be0
gnu: nss, nss-certs: Update to 3.43.
...
* gnu/packages/gnuzilla.scm (nss): Update to 3.43.
* gnu/packages/certs.scm (nss-certs): Ditto.
2019-03-21 23:29:21 +01:00
8c1d3395b3
gnu: nspr: Update to 4.21.
...
* gnu/packages/gnuzilla.scm (nspr): Update to 4.21.
2019-03-21 23:29:21 +01:00
03fb5ff6ae
gnu: libgit2: Avoid Python.
...
* gnu/packages/patches/libgit2-avoid-python.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
[inputs]: Remove python.
[native-inputs]: Add guile-2.2.
2019-03-21 23:29:10 +01:00
081850816f
Merge branch 'master' into staging
2019-03-21 23:18:54 +01:00
93f178b5a8
gnu: Add r-reinforcelearn.
...
* gnu/packages/cran.scm (r-reinforcelearn): New variable.
2019-03-21 22:48:54 +01:00
0c02f94f15
gnu: Add r-picante.
...
* gnu/packages/cran.scm (r-picante): New variable.
2019-03-21 22:48:31 +01:00
0a3ba39633
gnu: r-assertthat: Update to 0.2.1.
...
* gnu/packages/statistics.scm (r-assertthat): Update to 0.2.1.
2019-03-21 22:48:30 +01:00
340cae5631
gnu: r-rlang: Update to 0.3.2.
...
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.2.
2019-03-21 22:48:30 +01:00
792d526a25
gnu: teckit: Update to 2.5.9.
...
* gnu/packages/fontutils.scm (teckit): Update to 2.5.9.
2019-03-21 22:39:02 +01:00
93a55838bf
gnu: teckit: Adjust indentation.
...
* gnu/packages/fontutils.scm (teckit): Re-indent.
2019-03-21 22:38:24 +01:00
d7e213163b
gnu: teckit: Use release tarball.
...
* gnu/packages/fontutils.scm (teckit)[source]: Use URL-FETCH.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.
2019-03-21 22:38:14 +01:00
b47e5a6cc3
gnu: curl: Use hidden-package for curl's libssh2.
...
This is a followup to commits c1f4e6491caf8f7eb4f2
2019-03-21 16:35:34 -04:00
decea6eef0
gnu: r-recipes: Update to 0.1.5.
...
* gnu/packages/cran.scm (r-recipes): Update to 0.1.5.
[propagated-inputs]: Remove r-broom, r-ddalpha, r-dimred, and r-pls; add
r-generics, r-glue, and r-tidyr.
2019-03-21 21:09:55 +01:00
854f0603b6
gnu: r-zoo: Update to 1.8-5.
...
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-5.
2019-03-21 21:09:55 +01:00
c646d19ff7
gnu: r-mgcv: Update to 1.8-28.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-28.
2019-03-21 21:09:55 +01:00
a11d29b4e9
gnu: r-expm: Update to 0.999-4.
...
* gnu/packages/cran.scm (r-expm): Update to 0.999-4.
2019-03-21 21:09:55 +01:00
4c871a5537
gnu: r-pkgbuild: Update to 1.0.3.
...
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.3.
2019-03-21 21:09:55 +01:00
b7489004a4
gnu: emacs-emms: Add dependency on Mutagen.
...
* gnu/packages/emacs-xyz.scm (emacs-emms)[arguments]: In 'configure'
phase, for "emms-tag-editor.el", replace "mid3v2" but not "mp3info".
[inputs]: Add PYTHON-MUTAGEN.
2019-03-21 20:50:10 +01:00
ea4a1e5d0b
gnu: Add emacs-semantic-refactor.
...
* gnu/packages/emacs-xyz.scm (emacs-semantic-refactor): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-03-21 20:48:12 +01:00
2f87048dbe
gnu: elixir: Update to 1.8.1.
...
* gnu/packages/elixir.scm (elixir): Update to 1.8.1.
[source](patches): New field.
[home-page]: Use HTTPS.
* gnu/packages/patches/elixir-path-length.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-03-21 20:48:12 +01:00
7ac8d96d77
gnu: gnupg: Update to 2.2.14.
...
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.14.
2019-03-21 19:23:49 +01:00
b4d77cfa70
gnu: strace: Update to 5.0.
...
* gnu/packages/linux.scm (strace): Update to 5.0.
2019-03-21 19:23:49 +01:00
915618f2ff
gnu: glm: Update to 0.9.9.4.
...
* gnu/packages/maths.scm (glm): Update to 0.9.9.4.
2019-03-21 19:23:48 +01:00
941699b343
gnu: tbb: Update to 2019_U5.
...
* gnu/packages/tbb.scm (tbb): Update to 2019_U5.
[source]: Use GIT-FETCH because releases are no longer available.
2019-03-21 19:23:48 +01:00
05109e8ef8
gnu: varnish: Update to 6.2.0.
...
* gnu/packages/web.scm (varnish): Update to 6.2.0.
[arguments]: Remove obsolete configure flag. Add substitution for /bin/rm.
2019-03-21 19:23:48 +01:00
c11f86ff16
gnu: libgit2: Update to 0.28.1.
...
* gnu/packages/patches/libgit2-oom-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/version-control.scm (libgit2): Update to 0.28.1.
[source](patches): Remove 'libgit2-oom-test.patch'.
2019-03-21 19:23:48 +01:00
7c1693df42
gnu: elogind: Update to 241.1.
...
* gnu/packages/freedesktop.scm (elogind): Update to 241.1.
2019-03-21 19:23:48 +01:00
c1f4e6491c
gnu: curl: Restore derivation.
...
Commit af8f7eb4f2af8f7eb4f2
2019-03-21 19:23:47 +01:00
af8f7eb4f2
gnu: libssh2: Update to 1.8.1 [security fixes].
...
Fixes CVE-2019-{3855,3856,3857,3858,3859,3860,3861,3862,3863}.
* gnu/packages/ssh.scm (libssh2): Update to 1.8.1.
(libssh2-1.8.0): New variable.
* gnu/packages/curl.scm (curl)[inputs]: Use libssh2-1.8.0.
2019-03-21 13:37:01 -04:00
1661f09a10
gnu: vulkan-tools: Remove unnecessary inputs.
...
* gnu/packages/vulkan.scm (vulkan-tools)[inputs]: Remove mesa, vulkan-headers.
[native-inputs]: Add vulkan-headers.
2019-03-21 11:11:39 +01:00
ebfe592fd4
gnu: vulkan-loader: Remove unnecessary inputs.
...
* gnu/packages/vulkan.scm (vulkan-loader)[arguments]: Remove
-DBUILD_LAYERS=OFF.
[inputs]: Remove all.
[native-inputs]: Add libxrandr, vulkan-headers, wayland.
2019-03-21 10:56:16 +01:00
1e70d72b18
gnu: emacs-hackernews: Update to 0.5.0-1-916c3da.
...
* gnu/packages/emacs-xyz.scm (emacs-hackernews): Update to 0.5.0-1-916c3da.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-21 09:34:09 +01:00
f1aa44ada9
gnu: qwt: Update to 6.1.4.
...
* gnu/packages/qt.scm (qwt): Update to 6.1.4.
2019-03-21 04:07:03 +01:00
5cf3e6fcd5
gnu: jekyll: Update to 3.8.5.
...
* gnu/packages/ruby.scm (jekyll): Update to 3.8.5.
2019-03-21 04:07:02 +01:00
c664ebcc31
gnu: ruby-fivemat: Update to 1.3.7.
...
* gnu/packages/ruby.scm (ruby-fivemat): Update to 1.3.7.
2019-03-21 04:07:02 +01:00
bcf1fe5bbc
gnu: ruby-activesupport: Update to 5.2.2.1.
...
* gnu/packages/ruby.scm (ruby-activesupport): Update to 5.2.2.1.
2019-03-21 04:07:02 +01:00
e2fbc27210
gnu: ruby-rails: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-rails): Update to 5.2.2.1.
2019-03-21 04:07:02 +01:00
1835fc26b5
gnu: ruby-railties: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-railties): Update to 5.2.2.1.
2019-03-21 04:07:01 +01:00
5be0aedf76
gnu: ruby-actionmailer: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-actionmailer): Update to 5.2.2.1.
2019-03-21 04:07:01 +01:00
e16dd18981
gnu: ruby-activestorage: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-activestorage): Update to 5.2.2.1.
2019-03-21 04:07:01 +01:00
fbc2309f6d
gnu: ruby-activejob: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-activejob): Update to 5.2.2.1.
2019-03-21 04:07:01 +01:00
2a737e80ce
gnu: ruby-actioncable: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-actioncable): Update to 5.2.2.1.
2019-03-21 04:07:01 +01:00
24c704af8c
gnu: ruby-actionpack: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-actionpack): Update to 5.2.2.1.
2019-03-21 04:07:00 +01:00
e8df5a50c9
gnu: ruby-actionview: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-actionview): Update to 5.2.2.1.
2019-03-21 04:07:00 +01:00
0fb8ed1734
gnu: ruby-activerecord: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-activerecord): Update to 5.2.2.1.
2019-03-21 04:07:00 +01:00
22468de494
gnu: ruby-activemodel: Update to 5.2.2.1.
...
* gnu/packages/rails.scm (ruby-activemodel): Update to 5.2.2.1.
2019-03-21 04:07:00 +01:00
04ef07fecb
gnu: libmatroska: Update to 1.5.0.
...
* gnu/packages/video.scm (libmatroska): Update to 1.5.0.
2019-03-21 04:06:59 +01:00
309f340879
gnu: libmatroska: Don't use NAME in source URI.
...
* gnu/packages/video.scm (libmatroska)[source]: Hard-code NAME.
2019-03-21 04:06:59 +01:00
bd300261af
gnu: python-python-gast: Update to 0.2.2.
...
* gnu/packages/python-xyz.scm (python-python-gast): Update to 0.2.2.
2019-03-21 04:06:59 +01:00
91b61f0291
gnu: python-latexcodec: Update to 1.0.6.
...
* gnu/packages/python-xyz.scm (python-latexcodec): Update to 1.0.6.
2019-03-21 04:06:59 +01:00
ad1acb8111
gnu: python-pyro4: Update to 4.75.
...
* gnu/packages/python-xyz.scm (python-pyro4): Update to 4.75.
2019-03-21 04:06:58 +01:00
e6b244a588
gnu: plantuml: Update to 1.2019.3.
...
* gnu/packages/uml.scm (plantuml): Update to 1.2019.3.
2019-03-21 04:06:58 +01:00
58ab7f2961
gnu: ghostwriter: Update to 1.7.4.
...
* gnu/packages/text-editors.scm (ghostwriter): Update to 1.7.4.
2019-03-21 04:06:58 +01:00
98e7307dd3
gnu: kakoune: Update to 2019.01.20.
...
* gnu/packages/text-editors.scm (kakoune): Update to 2019.01.20.
2019-03-21 04:06:58 +01:00
a1cb69280c
gnu: kakoune: Don't use NAME in source URI.
...
* gnu/packages/text-editors.scm (kakoune)[source]: Hard-code NAME.
2019-03-21 04:06:57 +01:00
f86d56a7af
gnu: terraform-docs: Update to 0.6.0.
...
* gnu/packages/terraform.scm (terraform-docs): Update to 0.6.0.
2019-03-21 04:06:57 +01:00
2f33a7321e
cmake: Generate documentation.
...
To prevent complicating the dependencies of a core tool, a new variant,
CMAKE-MINIMAL is introduced and the CMake build system is configured to use it
by default. The regular CMAKE package gains a manpage, info manual as well
as HTML documentation.
Fixes issue #33497 (https://bugs.gnu.org/33497 ).
* gnu/packages/cmake.scm (gnu): Use modules (gnu packages python-xyz),
(gnu packages texinfo) and (srfi srfi-1).
(cmake-minimal): Rename the original cmake variable to this.
[phases]{configure}: Extract the configure script arguments to...
[configure-flags]: here.
[properties]: Set the HIDDEN? property to #t.
(cmake): New variable, which inherits from CMAKE-MINIMAL.
[phases]{move-html-doc}: Add phase.
[native-inputs]: Add PYTHON-SPHINX and TEXINFO.
[outputs]: Add the "doc" output.
[properties]: Clear the inherited HIDDEN? property.
* guix/build-system/cmake.scm (default-cmake): Use CMAKE-MINIMAL instead of
CMAKE.
2019-03-20 21:38:19 -04:00
6cea61ebb5
gnu: r-spam: Update to 2.2-2.
...
* gnu/packages/cran.scm (r-spam): Update to 2.2-2.
2019-03-21 00:02:52 +01:00
a7524f7000
gnu: r-sjstats: Update to 0.17.4.
...
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.4.
[propagated-inputs]: Remove r-bayesplot, r-coin, r-crayon, r-glmmtmb, r-nlme,
and r-pwr; add r-insight.
2019-03-21 00:02:52 +01:00
9d047572c8
gnu: r-gsl: Update to 2.1-5.
...
* gnu/packages/cran.scm (r-gsl): Update to 2.1-5.
2019-03-21 00:02:52 +01:00
f69ba00f09
gnu: r-coin: Update to 1.3-0.
...
* gnu/packages/cran.scm (r-coin): Update to 1.3-0.
[propagated-inputs]: Add r-libcoin and r-matrixstats.
2019-03-21 00:02:52 +01:00
c9ba1155a2
gnu: r-fs: Update to 1.2.7.
...
* gnu/packages/cran.scm (r-fs): Update to 1.2.7.
2019-03-21 00:02:51 +01:00
fef93da89d
gnu: r-ggeffects: Update to 0.9.0.
...
* gnu/packages/cran.scm (r-ggeffects): Update to 0.9.0.
[propagated-inputs]: Remove r-crayon, r-ggplot2, r-lme4, r-prediction,
r-sjstats, r-tidyr; add r-insight.
2019-03-21 00:02:51 +01:00
a3daf011cc
gnu: r-proc: Update to 1.14.0.
...
* gnu/packages/cran.scm (r-proc): Update to 1.14.0.
[propagated-inputs]: Remove r-ggplot2.
2019-03-21 00:02:51 +01:00
20b375ecd8
gnu: r-huge: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-huge): Update to 1.3.1.
2019-03-21 00:02:51 +01:00
8aef1ea6fd
gnu: r-rgl: Update to 0.100.19.
...
* gnu/packages/cran.scm (r-rgl): Update to 0.100.19.
2019-03-21 00:02:51 +01:00
37317189a7
gnu: r-argparse: Update to 2.0.1.
...
* gnu/packages/cran.scm (r-argparse): Update to 2.0.1.
[propagated-inputs]: Remove r-getopt.
2019-03-21 00:02:51 +01:00
fcb8456577
gnu: r-findpython: Update to 1.0.5.
...
* gnu/packages/cran.scm (r-findpython): Update to 1.0.5.
2019-03-21 00:02:51 +01:00
31af2e7f92
gnu: r-sjmisc: Update to 2.7.9.
...
* gnu/packages/cran.scm (r-sjmisc): Update to 2.7.9.
[propagated-inputs]: Remove r-broom, r-crayon, r-stringdist, r-stringr, and
r-tidyr.
2019-03-21 00:02:51 +01:00
1adcbeda5f
gnu: r-ncdf4: Update to 1.16.1.
...
* gnu/packages/cran.scm (r-ncdf4): Update to 1.16.1.
2019-03-21 00:02:51 +01:00
5e16dff99c
gnu: r-sjlabelled: Update to 1.0.17.
...
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.0.17.
[propagated-inputs]: Remove r-broom, r-prediction, and r-snakecase; add
r-insight.
2019-03-21 00:02:51 +01:00
83bfddd1b0
gnu: r-gmp: Update to 0.5-13.5.
...
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.5.
2019-03-21 00:02:51 +01:00
ae7e6f0620
gnu: r-mcmc: Update to 0.9-6.
...
* gnu/packages/cran.scm (r-mcmc): Update to 0.9-6.
2019-03-21 00:02:51 +01:00
7e6c5ebbea
gnu: r-gamlss-dist: Update to 5.1-3.
...
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-3.
2019-03-21 00:02:51 +01:00
1a38c31456
gnu: r-future: Update to 1.12.0.
...
* gnu/packages/cran.scm (r-future): Update to 1.12.0.
2019-03-21 00:02:51 +01:00
5ccf16c746
gnu: r-msir: Update to 1.3.2.
...
* gnu/packages/cran.scm (r-msir): Update to 1.3.2.
[propagated-inputs]: Remove r-rgl.
2019-03-21 00:02:50 +01:00
fc82a8f577
gnu: r-e1071: Update to 1.7-1.
...
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-1.
2019-03-21 00:02:50 +01:00
6720b37810
gnu: r-purrr: Update to 0.3.2.
...
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.2.
2019-03-21 00:02:50 +01:00
08859c8d27
gnu: r-mclust: Update to 5.4.3.
...
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.3.
2019-03-21 00:02:50 +01:00
c17ee12cf7
gnu: r-robustbase: Update to 0.93-4.
...
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-4.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
2019-03-21 00:02:50 +01:00
e469e10e20
gnu: r-zip: Update to 2.0.1.
...
* gnu/packages/cran.scm (r-zip): Update to 2.0.1.
2019-03-21 00:02:50 +01:00
35fe7882a8
gnu: r-tinytex: Update to 0.11.
...
* gnu/packages/cran.scm (r-tinytex): Update to 0.11.
2019-03-21 00:02:50 +01:00
76cbfb5ad5
gnu: r-processx: Update to 3.3.0.
...
* gnu/packages/cran.scm (r-processx): Update to 3.3.0.
2019-03-21 00:02:50 +01:00
78e2973827
gnu: r-cli: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-cli): Update to 1.1.0.
2019-03-21 00:02:50 +01:00
5275f9d7f9
gnu: r-ordinal: Update to 2019.3-9.
...
* gnu/packages/cran.scm (r-ordinal): Update to 2019.3-9.
2019-03-21 00:02:50 +01:00
739135b2be
gnu: r-lmoments: Update to 1.3-1.
...
* gnu/packages/cran.scm (r-lmoments): Update to 1.3-1.
[propagated-inputs]: Add r-rcpp and r-rcpparmadillo.
2019-03-21 00:02:50 +01:00
06070c0397
gnu: r-rcpp: Update to 1.0.1.
...
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.1.
2019-03-21 00:02:50 +01:00
b21eb34776
gnu: r-glue: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-glue): Update to 1.3.1.
2019-03-21 00:02:50 +01:00
f9bc918b81
gnu: r-colorspace: Update to 1.4-1.
...
* gnu/packages/cran.scm (r-colorspace): Update to 1.4-1.
2019-03-21 00:02:50 +01:00
50d063b511
gnu: r-readxl: Update to 1.3.1.
...
* gnu/packages/cran.scm (r-readxl): Update to 1.3.1.
2019-03-21 00:02:50 +01:00
1d7049335f
gnu: r-rmarkdown: Update to 1.12.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.12.
2019-03-21 00:02:49 +01:00
33fba4cea8
gnu: r-rcpparmadillo: Update to 0.9.200.7.1.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.7.1.
[native-inputs]: Add ghc-pandoc, ghc-pandoc-citeproc, and r-rmarkdown.
2019-03-21 00:02:49 +01:00
2391e97c4d
gnu: r-httpuv: Update to 1.5.0.
...
* gnu/packages/cran.scm (r-httpuv): Update to 1.5.0.
[native-inputs]: Remove pkg-config; move r-rcpp from here...
[propagated-inputs]: ...to here; add r-r6.
2019-03-21 00:02:49 +01:00
c2b45ac578
gnu: r-diversitree: Update to 0.9-11.
...
* gnu/packages/bioinformatics.scm (r-diversitree): Update to 0.9-11.
2019-03-21 00:02:49 +01:00
1081e8266f
gnu: r-rstudioapi: Update to 0.10.
...
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.10.
2019-03-21 00:02:49 +01:00
086ca4deae
gnu: r-git2r: Update to 0.25.2.
...
* gnu/packages/statistics.scm (r-git2r): Update to 0.25.2.
2019-03-21 00:02:49 +01:00
7590441976
gnu: r-tibble: Update to 2.1.1.
...
* gnu/packages/statistics.scm (r-tibble): Update to 2.1.1.
2019-03-21 00:02:49 +01:00
86c8b2f5f5
gnu: r-knitr: Update to 1.22.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.22.
2019-03-21 00:02:49 +01:00
b6c5b0aca2
gnu: r-highr: Update to 0.8.
...
* gnu/packages/statistics.scm (r-highr): Update to 0.8.
2019-03-21 00:02:49 +01:00
1f2862b1be
gnu: r-lazyeval: Update to 0.2.2.
...
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.2.
2019-03-21 00:02:49 +01:00
a9c8127290
gnu: r-stringi: Update to 1.4.3.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.4.3.
2019-03-21 00:02:49 +01:00
2bf224d0ca
gnu: r-permute: Update to 0.9-5.
...
* gnu/packages/statistics.scm (r-permute): Update to 0.9-5.
2019-03-21 00:02:49 +01:00
35663627fb
gnu: r-matrix: Update to 1.2-16.
...
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-16.
2019-03-21 00:02:49 +01:00
95bf4508e5
gnu: qtractor: Update to 0.9.6.
...
* gnu/packages/music.scm (qtractor): Update to 0.9.6.
2019-03-21 00:02:49 +01:00
8e91ad0b5c
gnu: r-ape: Update to 5.3.
...
* gnu/packages/cran.scm (r-ape): Update to 5.3.
2019-03-21 00:02:49 +01:00
db39269c89
gnu: r-maldiquant: Update to 1.19.2.
...
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.19.2.
2019-03-21 00:02:49 +01:00
42f344faf7
gnu: Add r-libcoin.
...
* gnu/packages/cran.scm (r-libcoin): New variable.
2019-03-21 00:02:48 +01:00
d1021421d9
gnu: r-callr: Update to 3.2.0.
...
* gnu/packages/cran.scm (r-callr): Update to 3.2.0.
2019-03-21 00:02:48 +01:00
df04509932
gnu: r-dendextend: Update to 1.10.0.
...
* gnu/packages/cran.scm (r-dendextend): Update to 1.10.0.
2019-03-21 00:02:48 +01:00
ffd6e2fd8f
gnu: r-sys: Update to 3.1.
...
* gnu/packages/cran.scm (r-sys): Update to 3.1.
2019-03-21 00:02:48 +01:00
28d0eb2565
gnu: r-diversitree: Fix typo.
...
* gnu/packages/bioinformatics.scm (r-diversitree)[propagated-inputs]: Fix typo
in package labels.
2019-03-21 00:02:48 +01:00
d14c770d55
gnu: Add r-insight.
...
* gnu/packages/cran.scm (r-insight): New variable.
2019-03-21 00:02:48 +01:00
8b672b2c48
gnu: blender: Restore version 2.79b for systems without OpenGL 3.
...
Fixes <https://bugs.gnu.org/33882 >.
* gnu/packages/graphics.scm (blender-2.79): New variable.
(blender)[description]: Remove obsolete claim that the stable
release no longer works in Guix.
* gnu/packages/patches/blender-2.79-newer-ffmpeg.patch,
gnu/packages/patches/blender-2.79-python-3.7-fix.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-03-20 18:20:36 -04:00
933cc19684
gnu: r-annotationhub: Update to 2.14.5.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.5.
2019-03-20 22:32:37 +01:00
e49d5d34ed
gnu: r-genomicfeatures: Update to 1.34.6.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.6.
2019-03-20 22:32:32 +01:00
2b83d218d8
gnu: r-variantannotation: Update to 1.28.13.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.13.
2019-03-20 22:32:25 +01:00
0adb6f207b
gnu: r-category: Update to 2.48.1.
...
* gnu/packages/bioinformatics.scm (r-category): Update to 2.48.1.
2019-03-20 22:32:17 +01:00
e014dc78f0
gnu: r-dexseq: Update to 1.28.3.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.3.
2019-03-20 22:32:11 +01:00
877fd189c4
gnu: r-annotate: Update to 1.60.1.
...
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.60.1.
2019-03-20 22:31:59 +01:00
ceab33feee
gnu: guile-wm: Compile and use canonical directories.
...
Fixes <https://bugs.gnu.org/34922 >.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Rename "set-go-directory"
phase to "set-module-directory"; change "set-load-path" phase to wrap
executable in the correct environment variables; add phase "install-go-files".
2019-03-20 21:04:31 +01:00
6854a5d5f7
gnu: obs: Update to 23.0.2.
...
* gnu/packages/video.scm (obs): Update to 23.0.2.
2019-03-20 20:42:42 +01:00
6b455f8c55
gnu: perl-plack-middleware-methodoverride: Update to 0.20.
...
* gnu/packages/web.scm (perl-plack-middleware-methodoverride): Update to 0.20.
2019-03-20 20:42:41 +01:00
84cd5bd7f8
gnu: perl-uri-template: Update to 0.24.
...
* gnu/packages/web.scm (perl-uri-template): Update to 0.24.
2019-03-20 20:42:41 +01:00
0341fb9b68
gnu: mkfontscale: Update to 1.2.0.
...
* gnu/packages/xorg.scm (mkfontscale): Update to 1.2.0.
2019-03-20 20:42:41 +01:00
bcc27a6533
gnu: xf86-video-ati: Update to 19.0.1.
...
* gnu/packages/xorg.scm (xf86-video-ati): Update to 19.0.1.
2019-03-20 20:42:40 +01:00
cbea33132a
gnu: xf86-video-amdgpu: Update to 19.0.1.
...
* gnu/packages/xorg.scm (xf86-video-amdgpu): Update to 19.0.1.
2019-03-20 20:42:40 +01:00
c21242d920
gnu: pencil2d: Update to 0.6.3.
...
* gnu/packages/animation.scm (pencil2d): Update to 0.6.3.
2019-03-20 20:42:40 +01:00
dee92e65a2
gnu: python-colorspacious: Don't use unstable tarball.
...
* gnu/packages/python-xyz.scm (python-colorspacious)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-20 20:42:39 +01:00
c74da2b6c4
gnu: linux-libre: Update to 5.0.3.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.3.
(%linux-libre-hash): Update hash.
2019-03-20 15:34:16 -04:00
c65cce08b4
gnu: linux-libre@4.19: Update to 4.19.30.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.30.
(%linux-libre-4.19-hash): Update hash.
2019-03-20 15:34:14 -04:00
7cbbee4a85
gnu: linux-libre@4.14: Update to 4.14.107.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.107.
(%linux-libre-4.14-hash): Update hash.
2019-03-20 15:34:12 -04:00
c62d0e678f
gnu: linux-libre@4.9: Update to 4.9.164.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.164.
2019-03-20 15:34:09 -04:00
c16423f143
services: Add nslcd-service-type.
...
* gnu/services/authentication.scm (nslcd-service-type, nslcd-configuration,
%nslcd-accounts): New variables.
(uglify-field-name, value->string, serialize-field, serialize-list,
ssl-option?, tls-reqcert-option?, deref-option?,
comma-separated-list-of-strings?, serialize-ignore-users-option, log-option?,
serialize-log-option, valid-map?, scope-option?, serialize-scope-option,
map-entry?, list-of-map-entries?, filter-entry?, list-of-filter-entries?,
serialize-filter-entry, serialize-list-of-filter-entries, serialize-map-entry,
serialize-list-of-map-entries, nslcd-config-file, nslcd-etc-service,
nslcd-shepherd-service, pam-ldap-pam-services, pam-ldap-pam-service,
generate-nslcd-documentation): New procedures.
* gnu/tests/ldap.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (LDAP Services): Document it.
2019-03-20 20:31:15 +01:00
bcf66fc2e7
gnu: samba: Update to 4.10.0.
...
* gnu/packages/samba.scm (samba): Update to 4.10.0.
[native-inputs]: Replace python-2 with python.
2019-03-20 20:25:51 +01:00
14e6b6a0ae
gnu: xpra: Update to 2.5.
...
* gnu/packages/xorg.scm (xpra): Update to 2.5.
2019-03-20 20:25:51 +01:00
5493320274
gnu: iproute2: Update to 5.0.0.
...
* gnu/packages/linux.scm (iproute): Update to 5.0.0.
[inputs, native-inputs]: Order alphabetically.
2019-03-20 16:21:06 +01:00
af184b68e7
gnu: 389-ds-base: Use more global directories.
...
* gnu/packages/openldap.scm (389-ds-base)[arguments]: Pass
"with-instconfigdir"; add phase "overwrite-default-locations" to overwrite
defaults for "initconfig_dir", the certificate location, and the location of
the defaults file.
2019-03-20 12:19:56 +01:00
19a0a060d2
gnu: 389-ds-base: Fix tool references.
...
* gnu/packages/openldap.scm (389-ds-base)[arguments]: Rename phase
"fix-includes" to "fix-references" and fix references to certutil and
c_rehash.
[inputs]: Add nss:bin.
2019-03-20 12:19:55 +01:00
35f9c6628f
gnu: Add adapterremoval.
...
* gnu/packages/bioinformatics.scm (adapterremoval): New variable.
2019-03-20 12:19:55 +01:00
7627bad6a7
gnu: 389-ds-base: Set localstatedir to /var.
...
* gnu/packages/openldap.scm (389-ds-base)[arguments]: Set localstatedir to
/var.
2019-03-20 12:19:55 +01:00
cbc6a28b67
gnu: 389-ds-base: Update to 1.4.0.21.
...
* gnu/packages/openldap.scm (389-ds-base): Update to 1.4.0.21.
[arguments]: Add phase "fix-includes".
[inputs]: Add cracklib.
2019-03-20 12:19:55 +01:00
3d7a7b1dd6
gnu: emacs-helm-notmuch: Update to 1.2.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-notmuch): Update to 1.2.
2019-03-20 11:58:37 +01:00
7c45593b44
gnu: libinfinity: Update to 0.7.1.
...
* gnu/packages/gobby.scm (libinfinity): Update to 0.7.1.
[inputs]: Remove gtk+-2. Add gtk+.
2019-03-20 15:40:43 +05:30
6d96a4f769
gnu: icecat: Update to 60.6.0-guix1 [security-fixes].
...
Includes fixes for CVE-2018-18506, CVE-2019-9788, CVE-2019-9790,
CVE-2019-9791, CVE-2019-9792, CVE-2019-9793, CVE-2019-9794, CVE-2019-9795,
CVE-2019-9796, and CVE-2019-9801.
* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.6.0-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
2019-03-19 22:36:44 -04:00
8cf160e122
gnu: icecat: Improve computed 'icecat-source' tarball.
...
* gnu/packages/gnuzilla.scm (icecat-source): When packing the new IceCat
tarball, set the mtime of archived files to early 1980. Remove useless
'string-append' applied to one argument.
2019-03-19 22:36:37 -04:00
d17b1c0891
gnu: knot: Update to 2.8.0.
...
* gnu/packages/dns.scm (knot): Update to 2.8.0.
[source]: Add patch.
* gnu/packages/patches/knot-include-system-lmdb-header.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-03-20 00:44:57 +01:00
1c4d4196c2
gnu: cataclysm-dda: Update to 0.D.
...
* gnu/packages/games.scm (cataclysm-dda): Update to 0.D.
2019-03-19 16:18:56 -04:00
c1d6865166
gnu: gandi.cli: Update to 1.4.
...
* gnu/packages/networking.scm (gandi.cli): Update to 1.4.
2019-03-19 18:21:17 +01:00
47982ca9b0
gnu: python-ipy: Update to 1.00.
...
* gnu/packages/networking.scm (python-ipy): Update to 1.00.
2019-03-19 18:21:16 +01:00
598c2bbc53
gnu: google-brotli: Update to 1.0.7.
...
* gnu/packages/compression.scm (google-brotli): Update to 1.0.7.
2019-03-19 16:57:48 +01:00
fc82c1752e
gnu: google-brotli: Don't use unstable tarball.
...
* gnu/packages/compression.scm (google-brotli)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-19 16:57:47 +01:00
7f5a010b9a
gnu: perl-catalyst-plugin-session: Update to 0.41.
...
* gnu/packages/web.scm (perl-catalyst-plugin-session): Update to 0.41.
2019-03-19 16:57:47 +01:00
2f67ac377a
gnu: perl-catalyst-action-rest: Update to 1.21.
...
* gnu/packages/web.scm (perl-catalyst-action-rest): Update to 1.21.
2019-03-19 16:57:47 +01:00
96473656ad
gnu: perl-apache-logformat-compiler: Update to 0.35.
...
* gnu/packages/web.scm (perl-apache-logformat-compiler): Update to 0.35.
[native-inputs]: Replace perl-module-build with
perl-module-build-tiny.
2019-03-19 16:57:47 +01:00
c10c9b6765
gnu: geomyidae: Update to 0.34.
...
* gnu/packages/web.scm (geomyidae): Update to 0.34.
2019-03-19 16:57:46 +01:00
e0d6d1d56c
gnu: geomyidae: Update home page.
...
* gnu/packages/web.scm (geomyidae)[home-page]: Point to relevant Web content.
2019-03-19 16:57:45 +01:00
429947ef62
gnu: geomyidae: Don't use unstable tarball.
...
* gnu/packages/web.scm (geomyidae)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-19 16:57:45 +01:00
ab3423d2ff
gnu: youtube-dl: Update to 2019.03.18.
...
* gnu/packages/video.scm (youtube-dl): Update to 2019.03.18.
2019-03-19 16:57:45 +01:00
8486a80d6a
gnu: dcmtk: Support more.
...
* gnu/packages/image-processing.scm (dcmtk)[inputs]: Add libxml2, and openssl.
2019-03-19 16:57:45 +01:00
882d579d3f
gnu: dcmtk: Update to 3.6.4.
...
* gnu/packages/image-processing.scm (dcmtk): Update to 3.6.4.
[inputs]: Add libjpeg. Order alphabetically. Move doxygen…
[native-inputs]: …here. Remove perl. Order alphabetically.
2019-03-19 16:57:44 +01:00
d2ad4f2e00
gnu: dcmtk: Use HTTPS home page.
...
* gnu/packages/image-processing.scm (dcmtk)[home-page]: Use HTTPS.
2019-03-19 16:57:44 +01:00
c0aaca02c7
gnu: Add emacs-helm-wikipedia.
...
* gnu/packages/emacs-xyz.scm (emacs-helm-wikipedia): New variable.
2019-03-19 15:55:08 +01:00
7d1494d979
gnu: mesa: Fix building on non-Intel architectures.
...
* gnu/packages/gl.scm (mesa)[arguments]: Add explicit vulkan-driver
support in match statement.
2019-03-19 16:54:33 +02:00
fe7c6f91dd
gnu: libdrm: Extend test timeout on armhf-linux.
...
* gnu/packages/xdisorg.scm (libdrm)[arguments]: Replace the 'check phase
on armhf-linux.
2019-03-19 16:54:33 +02:00
c022edf6f4
gnu: libdrm: Fix configure-flags.
...
* gnu/packages/xdisorg.scm (libdrm)[arguments]: Update configure-flags
for new build system. Join aarch64 and armhf selections.
2019-03-19 16:54:30 +02:00
2390e0d4d6
gnu: emacs-evil-collection: Update to 20190319.
...
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20190319.
2019-03-19 14:55:06 +01:00
f20c64ed0b
gnu: scanmem: Enable GUI frontend.
...
* gnu/packages/debug.scm (scanmem): Enable GUI frontend.
[arguments]: Add "--enable-gui" configure flag and 'hardcode-python,
'wrap-gameconqueror phases.
[native-inputs]: Add python-wrapper, gobject-introspection, gtk+.
[propogated-inputs]: Add python-pygobject.
2019-03-19 13:59:40 +01:00
c5542196d5
gnu: nanopolish: Use python-wrapper.
...
* gnu/packages/bioinformatics.scm (nanopolish)[inputs]: Replace "python" with
"python-wrapper" as scripts require "python" executable.
2019-03-19 13:30:41 +01:00
Tobias Geerinckx-Rice