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15018 Commits

Author SHA1 Message Date
Ricardo Wurmus 9ce764b689
gnu: Add ghc-rfc5051. 
* gnu/packages/haskell.scm (ghc-rfc5051): New variable.
 2016-10-06 14:18:24 +02:00
Ricardo Wurmus 37e02bf65b
gnu: Add ghc-hs-bibutils. 
* gnu/packages/haskell.scm (ghc-hs-bibutils): New variable.
 2016-10-06 14:18:24 +02:00
Ricardo Wurmus b376463552
gnu: ghc-streaming-commons: Remove standard packages from inputs. 
The "directory" and "transformers" modules are part of GHC and should
not be among the inputs to avoid conflicts.

* gnu/packages/haskell.scm (ghc-streaming-commons)[inputs]: Remove
"ghc-directory" and "ghc-transformers".
 2016-10-06 14:18:21 +02:00
Ricardo Wurmus fc47c7d635
gnu: Add r-bsgenome-celegans-ucsc-ce10. 
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10): New
variable.
 2016-10-06 10:33:43 +02:00
Leo Famulari 6a4cbc6f12
gnu: nss-certs and nss: Update to 3.27.1. 
* gnu/packages/certs.scm (nss-certs): Update to 3.27.1.
* gnu/packages/gnuzilla.scm (nss): Update to 3.27.1.
 2016-10-05 20:04:50 -04:00
Leo Famulari 1459476089
gnu: e2fsprogs: Fix typo in comment. 
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Fix typo in comment.
 2016-10-05 18:59:29 -04:00
Leo Famulari 7d45365684
gnu: e2fsprogs: Disable parallel build. 
* gnu/packages/linux.scm (e2fsprogs)[arguments]: Add #:parallel-build? #f.
 2016-10-05 17:41:44 -04:00
Leo Famulari 87312f8aa1
gnu: json-c: Update to 0.12.1. 
* gnu/packages/web.scm (json-c): Update to 0.12.1.
 2016-10-05 17:38:48 -04:00
Leo Famulari 813062a5f7
gnu: libxvmc: Fix CVE-2016-7953. 
* gnu/packages/patches/libxvmc-CVE-2016-7953.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxvmc)[replacement]: New field.
(libxvmc/fixed): New variable.
 2016-10-05 17:37:23 -04:00
Leo Famulari e73631a906
gnu: libxv: Fix CVE-2016-5407. 
* gnu/packages/patches/libxv-CVE-2016-5407.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxv)[replacement]: New field.
(libxv/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari 1f90b80f8b
gnu: libxtst: Fix CVE-2016-{7951,7952}. 
* gnu/packages/patches/libxtst-CVE-2016-7951-CVE-2016-7952.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxtst)[replacement]: New field.
(libxtst/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari 666d40193c
gnu: libxrender: Fix CVE-2016-{7949,7950}. 
* gnu/packages/patches/libxrender-CVE-2016-7949.patch,
gnu/packages/patches/libxrender-CVE-2016-7950.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (libxrender)[replacement]: New field.
(libxrender/fixed): New variable.
 2016-10-05 17:37:22 -04:00
Leo Famulari a300db1c7f
gnu: libxrandr: Fix CVE-2016-{7947,7948}. 
* gnu/packages/patches/libxrandr-CVE-2016-7947-CVE-2016-7948.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxrandr)[replacement]: New field.
(libxrandr/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari b78ba2274f
gnu: libxi: Fix CVE-2016-{7945,7946}. 
* gnu/packages/patches/libxi-CVE-2016-7945-CVE-2016-7946.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxi)[replacement]: New field.
(libxi/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari b50c6bf2a8
gnu: libxfixes: Fix CVE-2016-7944. 
* gnu/packages/patches/libxfixes-CVE-2016-7944.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xorg.scm (libxfixes)[replacement]: New field.
(libxfixes/fixed): New variable.
 2016-10-05 17:37:21 -04:00
Leo Famulari 13c10b4ca4
gnu: libx11: Fix CVE-2016-{7942,7943}. 
* gnu/packages/patches/libx11-CVE-2016-7942.patch,
gnu/packages/patches/libx11-CVE-2016-7943.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (libx11)[replacement]: New field.
(libx11/fixed): New variable.
 2016-10-05 17:37:15 -04:00
ng0 4ae1f8cf39
Update e-mail address for ng0. 
* .mailmap: Add new entries for ng0.
 2016-10-05 16:41:27 -04:00
ng0 81d5a62fb1
gnu: Remove lispf4. 
The package in its current state is unusable and documentation with unclear
licenses is included.

Also, the file 'lispf42.c' (and possible others) is generated C code and
thus not "source code" as we define it.

* gnu/packages/lisp.scm (lispf4): Delete variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-10-05 16:23:56 -04:00
Tobias Geerinckx-Rice 151df6ab3d
gnu: btrfs-progs: Update to 4.8. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.
 2016-10-05 22:07:21 +02:00
Leo Famulari bda45da336
gnu: libass: Update to 0.13.4 [fixes CVE-2016-{7969,7970,7972}. 
* gnu/packages/video.scm (libass): Update to 0.13.4.
 2016-10-05 16:04:26 -04:00
Efraim Flashner a4796b29e1
gnu: gnucash: Update to 2.6.14. 
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.14.
 2016-10-05 20:42:49 +03:00
Danny Milosavljevic b04ca7a12b
gnu: Add sunxi-tools. 
* gnu/packages/admin.scm (sunxi-tools): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-05 18:50:52 +02:00
Leo Famulari 517318adf0
gnu: Add Vc. 
* gnu/packages/maths.scm (vc): New variable.
 2016-10-05 12:49:41 -04:00
Ludovic Courtès 9d50da7060
gnu: wordnet: Make sure the self-reference is visible to the GC. 
Before that, "guix gc --references $(guix build wordnet)" would not show
WordNet itself, erroneously so.

* gnu/packages/wordnet.scm (wordnet)[arguments]: Add -fno-builtin-strcpy
  to #:configure-flags.
 2016-10-05 18:35:55 +02:00
Ludovic Courtès 939f87438c
gnu: wordnet: Compile with optimizations. 
* gnu/packages/wordnet.scm (wordnet)[arguments]: Add -O2 to
  #:configure-flags.
 2016-10-05 18:35:55 +02:00
Kei Kebreau cd1869cdbd
gnu: Add hyperrogue. 
* gnu/packages/games.scm (hyperrogue): New variable.
 2016-10-05 10:10:36 -04:00
Ludovic Courtès 358db0041f
gnu: grub: Make dependency on mdadm explicit. 
* gnu/packages/grub.scm (grub)[arguments]: Path getroot.c in
'patch-stuff' phase.
[inputs]: Add MDADM.
 2016-10-05 15:11:08 +02:00
Ludovic Courtès ab2cc5cde1
gnu: gsl: Disable failing tests on i686. 
* gnu/packages/patches/gsl-test-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (gsl)[source](patches): New field.
 2016-10-05 15:11:08 +02:00
Leo Famulari 50948a9026
gnu: git: Update to 2.10.1. 
* gnu/packages/version-control.scm (git): Update to 2.10.1.
 2016-10-05 01:57:51 -04:00
Ludovic Courtès acbf2c4f60
gnu: guix: Honor the user's 'GUILE_LOAD_PATH'. 
* gnu/packages/package-management.scm (guix-0.11.0)[arguments]: Use
'prefix' when wrapping 'guix' for 'GUILE_LOAD_PATH'.
 2016-10-04 22:40:46 +02:00
Ludovic Courtès 6e52376d2e
mapped-devices: Properly open RAID devices. 
This fixes a type error introduced in
7f8ad82bf2, given that SOURCES is a list.

* gnu/system/mapped-devices.scm (open-raid-device): Add 'apply'
invocation.
 2016-10-04 19:51:53 +02:00
Ludovic Courtès 8cecd22e4a
gnu: Add GoAccess. 
* gnu/packages/web.scm (goaccess): New variable.
 2016-10-04 17:44:27 +02:00
Ludovic Courtès a9764b7d2e
gnu: pies: Update to 1.3. 
* gnu/packages/admin.scm (pies): Update to 1.3.
[arguments]: New field.
 2016-10-04 16:38:00 +02:00
Ludovic Courtès 9d3425f24a
gnu: global: Update to 6.5.5. 
* gnu/packages/code.scm (global): Update to 6.5.5.
 2016-10-04 16:37:59 +02:00
Ludovic Courtès 8c82e1c9d3
gnu: gsl: Update to 2.2.1. 
* gnu/packages/maths.scm (gsl): Update to 2.2.1.
 2016-10-04 16:37:59 +02:00
Ludovic Courtès bac67a5a5c
gnu: direvent: Update to 5.1. 
* gnu/packages/admin.scm (direvent): Update to 5.1.
[arguments]: Augment 'patch-/bin/sh' phase to patch 'progman.c' and
'testsuite'.
 2016-10-04 16:37:59 +02:00
Ludovic Courtès d35f8c7cb6
gnu: gnu-c-manual: Update to 0.2.5. 
* gnu/packages/gcc.scm (gnu-c-manual): Update to 0.2.5.
 2016-10-04 16:37:59 +02:00
Ludovic Courtès a884fa2141
gnu: rush: Update to 1.8. 
* gnu/packages/rush.scm (rush): Update to 1.8.
[source]: Remove 'patches'.
* gnu/packages/patches/cpio-gets-undeclared.patch,
gnu/packages/patches/rush-CVE-2013-6889.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2016-10-04 16:37:59 +02:00
Hartmut Goebel afb325d842
Set Emacs config variable sentence-end-double-space. 
Users using a non-English environment may have set this to `nil´, which
leads to fill-paragraph removing the second space.

* .dir-locals.el: Set sentence-end-double-space to true.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-04 16:37:59 +02:00
Leo Famulari 491dbac415
gnu: cryptsetup: Update to 1.7.2. 
* gnu/packages/cryptsetup.scm (cryptsetup): Update to 1.7.2.
[source]: Use kernel mirror.
[home-page]: Update URL.
 2016-10-04 10:24:46 -04:00
Ben Woodcroft 2c3eb4b85b
gnu: metabat: Update to 0.32.4-1.cbdca756. 
* gnu/packages/bioinformatics.scm (metabat): Update to 0.32.4-1.cbdca756.
* gnu/packages/patches/metabat-remove-compilation-date.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-10-04 22:02:52 +10:00
Ludovic Courtès 47c14714a4
gnu: fish: Do not use the bundled PCRE2. 
* gnu/packages/shells.scm (fish)[inputs]: Add PCRE2.
 2016-10-04 11:26:45 +02:00
Arun Isaac a8d3bc473d
gnu: fish: Add input bc. 
Fixes <http://bugs.gnu.org/24433>.

* gnu/packages/shells.scm (fish)[inputs]: Add bc.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-10-04 11:26:45 +02:00
Ricardo Wurmus c5d17d50d0
gnu: warzone2100: Update to 3.2.1. 
* gnu/packages/games.scm (warzone2100): Update to 3.2.1.
[arguments]: Remove phase "set-sdl-paths", add phase
"link-tests-with-qt", add phase "remove-reference-to-missing-file".
[inputs]: Replace "qt-4" with "qt", replace "sdl-union" with
"sdl2", add "openssl".
 2016-10-04 10:21:38 +02:00
Ricardo Wurmus 5c31e981bb
gnu: ruby-nokogumbo: Move "build-gemspec" phase after "unpack". 
* gnu/packages/ruby.scm (ruby-nokogumbo)[arguments]: Move
"build-gemspec" phase after "unpack".
 2016-10-04 08:54:55 +02:00
Ricardo Wurmus 92a312dc86
gnu: python-pathlib: Disable tests. 
* gnu/packages/python.scm (python-pathlib)[arguments]: Disable tests.
 2016-10-04 08:54:55 +02:00
Ricardo Wurmus ced12a7bff
gnu: ghmm: Run tests after install. 
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Move "check"
phase after "install"; add phase "fix-PYTHONPATH".
 2016-10-04 08:54:55 +02:00
Ricardo Wurmus 4262d178a7
gnu: raincat: Add missing input. 
* gnu/packages/games.scm (raincat)[inputs]: Add freeglut.
 2016-10-04 08:48:55 +02:00
Ricardo Wurmus d910d584b7
gnu: supertux: Update to 0.5.0. 
* gnu/packages/games.scm (supertux): Update to 0.5.0.
[arguments]: Add flag to disable static boost libraries.
 2016-10-04 08:38:09 +02:00
Leo Famulari c88cd83b71
gnu: parallel: Update to 20160922. 
* gnu/packages/parallel.scm (parallel): Update to 20160922.
 2016-10-03 23:59:29 -04:00