6619f9c769
gnu: Add eigensoft.
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* gnu/packages/bioinformatics.scm (eigensoft): New variable.
2016-07-14 08:58:35 +02:00
42d6d0d0d6
gnu: python-setuptools-scm: Update to 1.11.1.
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* gnu/packages/python.scm (python-setuptools-scm): Update to 1.11.1.
2016-07-14 05:51:03 +03:00
2d94702ff4
system: Change the shell of 'nobody' to 'nologin'.
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Fixes <http://bugs.gnu.org/23971 >.
Reported by Vincent Legoll <vincent.legoll@gmail.com>.
* gnu/system/shadow.scm (%base-user-accounts): Add 'shell' field. Set
'home-directory' to "/nonexistent".
2016-07-13 23:42:35 +02:00
4c7260011e
gnu: grub: Update to 2.02~beta3.
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* gnu/packages/grub.scm (grub): Update to 2.02~beta3.
[arguments]: Modify tests/grub_func_test.in in 'patch-stuff' phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 23:26:04 +02:00
66f8f5f9c3
gnu: screen: Remove unneeded configure flags.
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* gnu/packages/screen.scm (screen)[arguments]: Remove --infodir and
--mandir, which are no longer needed.
2016-07-13 23:26:04 +02:00
a7e7981c7d
gnu: screen: Support 256 colors.
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* gnu/packages/screen.scm (screen)[arguments]: Pass --enable-colors256.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 23:26:04 +02:00
7a7d6b2bde
gnu: linux-libre: Update to 4.6.4.
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* gnu/packages/linux.scm (linux-libre): Update to 4.6.4.
2016-07-12 22:09:08 -04:00
8f1488c639
gnu: linux-libre-4.4: Update to 4.4.15.
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* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.15.
2016-07-12 22:08:58 -04:00
abba1d087e
gnu: Add gptfdisk.
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* gnu/packages/disk.scm (gptfdisk): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 00:32:21 +02:00
bdff55eac3
gnu: emacs-flycheck: Add missing dependency on emacs-seq.
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Fixes a regression introduced in
afb6fdaa5d
2016-07-12 22:47:08 +02:00
c1629416d8
gnu: Remove unneeded 'imported-modules' fields for 'origin'.
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* gnu/packages/engineering.scm (fastcap)[source](modules,
imported-modules): Remove.
* gnu/packages/wm.scm (awesome)[source](imported-modules): Remove.
* tests/packages.scm ("package-source-derivation, snippet"): Remove
'imported-modules' field.
2016-07-12 22:47:08 +02:00
a91c3fc727
services: <shepherd-service> no longer has an 'imported-modules' field.
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* gnu/services/shepherd.scm (<shepherd-service>)[imported-modules]:
Remove.
(%default-imported-modules): Make private.
(shepherd-service-file): Use 'with-imported-modules'.
(shepherd-configuration-file): Remove 'modules' and the calls to
'imported-modules' and 'compiled-modules'. Use
'with-imported-modules' instead.
* doc/guix.texi (Shepherd Services): Adjust accordingly.
* gnu/services/base.scm (file-system-shepherd-service): Use
'with-imported-modules'. Remove 'imported-modules' field.
* gnu/system/mapped-devices.scm (device-mapping-service-type): Remove
'imported-modules'.
(open-luks-device): Use 'with-imported-modules'.
* gnu/tests.scm (marionette-shepherd-service): Remove 'imported-modules'
field and use 'with-imported-modules'.
2016-07-12 22:47:08 +02:00
fd12989398
gnu: Use 'gexp->file' in conjunction with 'with-imported-modules'.
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* gnu/services.scm (activation-script): Remove code to set '%load-path'
and use 'with-imported-modules' instead.
(cleanup-gexp): Likewise.
* gnu/system/vm.scm (%vm-module-closure): New variable.
(expression->derivation-in-linux-vm): Remove #:modules.
[loader]: Remove code to set '%load-path'.
[builder]: Use %VM-MODULE-CLOSURE.
(qemu-image): Use 'with-imported-modules'.
2016-07-12 22:47:08 +02:00
2b4185792d
gexp: 'gexp->file' emits code to set '%load-path'.
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* guix/gexp.scm (gexp->file): Add #:set-load-path? parameter and honor it.
* gnu/system.scm (operating-system-parameters-file): Pass
#:set-load-path? #f.
* doc/guix.texi (G-Expressions): Adjust accordingly.
2016-07-12 22:47:08 +02:00
43dcce8674
linux-container: Fix list of imported modules.
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This fixes a regression introduced in
958dd3ce68
2016-07-12 22:47:08 +02:00
4ee96a7912
gnu: Switch to 'with-imported-modules'.
...
* gnu/services.scm (directory-union): Use 'with-imported-modules'
instead of the '#:modules' argument of 'computed-file'.
* gnu/services/base.scm (udev-rules-union): Likewise.
* gnu/services/dbus.scm (system-service-directory): Likewise.
* gnu/services/desktop.scm (wrapped-dbus-service):
(polkit-directory): Likewise.
* gnu/services/networking.scm (tor-configuration->torrc): Likewise.
* gnu/services/xorg.scm (xorg-configuration-directory): Likewise.
* gnu/system/install.scm (self-contained-tarball): Likewise.
* gnu/system/linux-container.scm (container-script): Likewise.
* gnu/system/linux-initrd.scm (expression->initrd): Likewise, and
remove #:modules parameter.
(flat-linux-module-directory): Use 'with-imported-modules'.
(base-initrd): Likewise.
* gnu/system/locale.scm (locale-directory): Likewise.
* gnu/system/shadow.scm (default-skeletons): Likewise.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Likewise.
* gnu/tests/base.scm (run-basic-test): Likewise.
* gnu/tests/install.scm (run-install): Likewise.
* doc/guix.texi (Initial RAM Disk): Update 'expression->initrd'
documentation.
2016-07-12 22:47:08 +02:00
08858812b5
gnu: obs: Remove compiler flags for non-Intel hardware.
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* gnu/packages/video.scm (obs)[arguments]: If compiling for arm or mips
devices then don't add Intel specific compiler flags.
2016-07-12 18:14:22 +03:00
17dc32a400
gnu: Add Ribotaper.
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* gnu/packages/bioinformatics.scm (ribotaper): New variable.
2016-07-12 12:19:39 +02:00
9a8f309cf1
gnu: Add bedtools-2.18.
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* gnu/packages/bioinformatics.scm (bedtools-2.18): New variable.
2016-07-12 12:19:15 +02:00
34c553b07e
gnu: xscreensaver: Update to 5.35.
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* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.35.
2016-07-12 10:34:43 +03:00
46cd684e2c
gnu: sxhkd: Update to 0.5.6.
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* gnu/packages/xdisorg.scm (sxhkd): Update to 0.5.6.
2016-07-12 09:59:10 +03:00
1f1e620f88
gnu: mtdev: Update to 1.1.5.
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* gnu/packages/xdisorg.scm (mtdev): Update to 1.1.5.
2016-07-12 09:45:07 +03:00
af2b0b1507
gnu: libxkbcommon: Update to 0.6.1.
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* gnu/packages/xdisorg.scm (libxkbcommon): Update to 0.6.1.
2016-07-12 09:34:24 +03:00
16d8f9beb5
gnu: arandr: Update to 0.1.9.
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* gnu/packages/xdisorg.scm (arandr): Update to 0.1.9.
2016-07-12 09:29:57 +03:00
6dc4d4655e
gnu: mpd: Update to 0.19.17.
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* gnu/packages/mpd.scm (mpd): Update to 0.19.17.
2016-07-12 01:54:47 -04:00
51d8039b4a
gnu: parallel: Update to 20160622.
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* gnu/packages/parallel.scm (parallel): Update to 20160622.
2016-07-12 14:47:50 +10:00
cdd8e0776e
gnu: Add Tmux Themepack.
...
* gnu/packages/tmux.scm (tmux-themepack): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-10 15:18:17 -04:00
8ac012d0ca
gnu: help2man: Update to 1.47.4.
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* gnu/packages/man.scm (help2man): Update to 1.47.4.
2016-07-10 21:34:37 +03:00
c635ff8369
gnu: man-pages: Update to 4.0.6.
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* gnu/packages/man.scm (man-pages): Update to 4.0.6.
2016-07-10 21:34:37 +03:00
dfce38993e
gnu: man-db: Update to 2.7.5.
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* gnu/packages/man.scm (man-db): Update to 2.7.5.
2016-07-10 21:34:37 +03:00
cf1dc4b7e6
gnu: obs: Update to 0.15.1.
...
* gnu/packages/video.scm (obs): Update to 0.15.1.
2016-07-10 21:34:37 +03:00
5e3f68e67c
gnu: libbluray: Update to 0.9.3.
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* gnu/packages/video.scm (libbluray): Update to 0.9.3.
2016-07-10 21:34:37 +03:00
0e6ee10c07
gnu: libmtp: Update to 1.1.11.
...
* gnu/packages/patches/libmtp-devices.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
2016-07-10 18:02:04 +02:00
7f575d3e56
gnu: diamond: Update to 0.8.12.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.12.
2016-07-10 22:32:57 +10:00
0e74bb5bd6
gnu: Add gnome-mpv.
...
* gnu/packages/video.scm (gnome-mpv): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-10 07:11:08 +03:00
6cf83e3f83
gnu: mpv: Enable shared library support.
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* gnu/packages/video.scm (mpv): Enable shared library support.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-10 07:10:55 +03:00
9d5448f35f
gnu: ccache: Update to 3.2.5.
...
* gnu/packages/ccache.scm (ccache): Update to 3.2.5.
[native-inputs]: Add which.
2016-07-10 06:48:27 +03:00
e9fd10a83b
gnu: ldb: Update to 1.1.26.
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* gnu/packages/samba.scm (ldb): Update to 1.1.26.
2016-07-10 06:48:27 +03:00
ea26457dad
gnu: tevent: Update to 0.9.28.
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* gnu/packages/samba.scm (tevent): Update to 0.9.28.
2016-07-10 06:48:27 +03:00
67e7452dda
gnu: talloc: Update to 2.1.7.
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* gnu/packages/samba.scm (talloc): Update to 2.1.7.
2016-07-10 06:48:27 +03:00
8b21d22d6a
gnu: samba: Update to 4.3.11 [fixes CVE-2016-2119].
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* gnu/packages/samba.scm (samba): Update to 4.3.11.
2016-07-10 06:48:27 +03:00
1a6d3d2df7
gnu: dropbear: Update to 2016.73.
...
* gnu/packages/ssh.scm (dropbear): Update to 2016.73.
2016-07-09 19:38:36 -04:00
a502dfbf4c
gnu: Add python-jedi.
...
* gnu/packages/python.scm (python-jedi, python2-jedi): New variables.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-09 14:12:14 -04:00
ec2a67de88
gnu: Add python-dendropy.
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* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-09 08:00:34 +10:00
c11f79a49e
gnu: star: Restrict supported systems to 64-bit systems.
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* gnu/packages/bioinformatics.scm (star)[supported-systems]: Restrict to
x86_64-linux and mips64el-linux.
2016-07-08 22:10:05 +10:00
71ca053928
gnu: rxvt-unicode: Update to 9.22.
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* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.22.
2016-07-07 20:46:29 -04:00
6c12abbdb2
services: nginx: Fix typo.
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* gnu/services/web.scm (nginx-service): Fix typo.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:42:58 -04:00
614023981a
gnu: Add di.
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* gnu/packages/admin.scm (di): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:38:49 -04:00
1a5fd02a82
gnu: getmail: Update to 4.49.0.
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* gnu/packages/mail.scm (getmail): Update to 4.49.0.
2016-07-07 20:02:11 +03:00
a0b15f5eef
gnu: python-pyusb: Update to 1.0.0.
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* gnu/packages/libusb.scm (python-pyusb): Update to 1.0.0.
2016-07-07 19:59:25 +03:00
Ricardo Wurmus