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32430 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice a1eabab1a3
gnu: opensmtpd: Clarify phase name. 
* gnu/packages/mail.scm (opensmtpd)[arguments]: Rename
‘install-compatibilitymode’ to ‘install-compatibility-links’ and avoid
needless abbrevs while at it.
 2018-06-08 16:00:17 +02:00
Tobias Geerinckx-Rice 19fed04915
gnu: opensmtpd: Patch FHS assumptions. 
This fixes the following failure...

  # smtpctl show message 9275c3fbeccbae93
  execl: No such file or directory

...due to the absence of ‘/bin/cat’ on GuixSD.

* gnu/packages/mail.scm (opensmtpd)[arguments]: Add
‘patch-FHS-file-names’ phase.
 2018-06-08 16:00:17 +02:00
Oleg Pykhalov 2dfb9bbf23
gnu: duplicity: Update to 0.7.17. 
* gnu/packages/backup.scm (duplicity): Update to 0.7.17.
 2018-06-08 16:25:44 +03:00
Oleg Pykhalov c0888cefdf
gnu: Add python-fasteners. 
* gnu/packages/python.scm (python-fasteners, python2-fasteners): New
variables.
 2018-06-08 16:25:44 +03:00
Ludovic Courtès fb126314f8
vm: 'iso9660-image' uses a local /tmp. 
Fixes <https://bugs.gnu.org/31752>.
Regression introduced in commit 8c9bf2946a.

* gnu/system/vm.scm (iso9660-image): Pass #:file-systems to
'expression->derivation-in-linux-vm'.
 2018-06-08 15:23:39 +02:00
Ludovic Courtès 50e53c1c67
vm: 'expression->derivation-in-linux-vm' takes a #:file-systems parameter. 
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Add
 #:file-systems and use it instead of %LINUX-VM-FILE-SYSTEMS.
 2018-06-08 15:23:39 +02:00
Ludovic Courtès 849a1399ca
gnu: doxygen: Work around GCC ICE on armhf-linux. 
Reported by Mark H Weaver <mhw@netris.org>
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=31708#10>.

* gnu/packages/patches/doxygen-gcc-ice.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/documentation.scm (doxygen)[inputs]: Add "gcc-ice-patch"
on armhf-* only.
[arguments]: Add 'apply-gcc-patch' phase on armhf-* only.
 2018-06-08 15:23:39 +02:00
Ludovic Courtès 9953685c09
config: Remove 'canonicalize-path' call. 
The call was unnecessary and would cause test failures because
'test-tmp/db' does not exist initially.

* guix/config.scm.in (%store-database-directory): Remove
'canonicalize-path' call.
 2018-06-08 15:23:39 +02:00
Ludovic Courtès 751164bca1
build: Do not add all of $(BUILT_SOURCES) to $(CLEANFILES). 
Reported by Gábor Boskovits <boskovits@gmail.com>.
Fixes <https://bugs.gnu.org/31700>.

* nix/local.mk (CLEANFILES): Add nothing but schema.sql.hh.
 2018-06-08 15:23:39 +02:00
宋文武 cd8ece22bf
gnu: redis: Update to 4.0.9. 
* gnu/packages/database.scm (redis): Update to 4.0.9.
 2018-06-08 20:27:30 +08:00
Paul Garlick 0b88f7e7a7
gnu: ikiwiki: Add inputs for CGI script and remove duplicate input. 
* gnu/packages/web.scm (ikiwiki)[inputs]: Add perl-cgi-formbuilder and
perl-db-file.  Remove perl-uri duplicate.  Sort 'perl-*' inputs
alphabetically.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-06-08 20:27:30 +08:00
Paul Garlick f52de1e17f
gnu: Add perl-cgi-formbuilder. 
* gnu/packages/web.scm (perl-cgi-formbuilder): New variable.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2018-06-08 20:27:30 +08:00
Oleg Pykhalov 74032da3a2
import: elpa: Add recursive import. 
* doc/guix.texi (Invoking guix import): Document elpa recursive import.
* guix/import/elpa.scm (elpa-package->sexp): Return package and
dependencies values.
(elpa-guix-name, elpa-recursive-import): New procedures.
* guix/scripts/import/elpa.scm (show-help, %options): Add recursive
option.
(guix-import-elpa): Use 'elpa-recursive-import'.
 2018-06-08 14:58:33 +03:00
Oleg Pykhalov ae9e5d6602
import: utils: Add recursive-import. 
* guix/import/cran.scm (cran-guix-name, cran-recursive-import): New
procedures.
(recursive-import): Remove procedure.
* guix/import/utils.scm (guix-name, recursive-import): New procedures.
* guix/scripts/import/cran.scm (guix-import-cran): Use
'cran-recursive-import' procedure.
 2018-06-08 14:58:33 +03:00
Mark H Weaver 0b2fd1600f
gnu: linux-libre@4.9: Update to 4.9.107. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.107.
 2018-06-07 23:38:28 -04:00
Mark H Weaver b09dc3b911
gnu: linux-libre@4.4: Update to 4.4.136. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.136.
 2018-06-07 23:37:46 -04:00
Tobias Geerinckx-Rice 20860819d6
gnu: ruby-asciidoctor: Update description. 
Synchronise with upstream README.

* gnu/packages/ruby.scm (ruby-asciidoctor)[description]: Add PDF.
 2018-06-07 23:58:26 +02:00
Tobias Geerinckx-Rice 4ee41a6ac1
gnu: inxi: Fix up synopsis & description. 
* gnu/packages/admin.scm (inxi)[synopsis]: Fix typo.
[description]: Use @code{}.
 2018-06-07 23:58:26 +02:00
Tobias Geerinckx-Rice 7a83eb37ad
gnu: libngspice: Update to 28. 
* gnu/packages/engineering.scm (libngspice): Update to 28.
 2018-06-07 23:58:25 +02:00
Tobias Geerinckx-Rice ec425ca3a6
gnu: libngspice: Use C-locale date format. 
* gnu/packages/engineering.scm (libngspice): Use a more standard
(C-locale) date format when forging timestamps.
 2018-06-07 23:57:39 +02:00
Tobias Geerinckx-Rice 10ee03c1df
gnu: python-pyxdg: Return #t from phases. 
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Substitute
INVOKE for SYSTEM*.
 2018-06-07 23:57:39 +02:00
Tobias Geerinckx-Rice 5f82a9d5cc
gnu: seabios: Return #t from all phases. 
* gnu/packages/firmware.scm (seabios)[arguments]: Return #t from
the ‘install’ phase.
 2018-06-07 23:57:38 +02:00
Tobias Geerinckx-Rice edf075987c
gnu: gnuastro: Add TIFF support. 
This adds ~3.6 MiB (3.6%) to gnuastro's now-103.9 MiB closure.

* gnu/packages/astronomy.scm (gnuastro)[inputs]: Add libtiff and zlib.
 2018-06-07 23:57:38 +02:00
Tobias Geerinckx-Rice 33031faa4e
gnu: xmlsec: Update to 1.2.26. 
* gnu/packages/xml.scm (xmlsec): Update to 1.2.26.
 2018-06-07 23:57:38 +02:00
Tobias Geerinckx-Rice 6d727bf4c7
gnu: xcalib: Update to 0.10. 
* gnu/packages/xdisorg.scm (xcalib): Update to 0.10.
[home-page]: Switch to new upstream.
[source]: Use GIT-FETCH.  Add xcalib-update-man-page.patch.
[build-system]: Switch to CMAKE-BUILD-SYSTEM.
[arguments]: Remove the old build system's arguments.
[inputs]: Add libxrandr.
 2018-06-07 23:57:38 +02:00
Tobias Geerinckx-Rice d35135fa9e
gnu: perl-net-http: Update to 6.18. 
* gnu/packages/web.scm (perl-net-http): Update to 6.18.
 2018-06-07 23:57:37 +02:00
Tobias Geerinckx-Rice c727262d5f
gnu: perl-cgi: Update to 4.38. 
* gnu/packages/web.scm (perl-cgi): Update to 4.38.
 2018-06-07 23:57:37 +02:00
Danny Milosavljevic 5e88194661
gnu: qucs: Patch bootstrapping scripts. 
* gnu/packages/engineering.scm (qucs)[arguments]<#:phases>[patch-bootstrap]:
New phase.
 2018-06-07 23:23:40 +02:00
Theodoros Foradis 394b89ae04
gnu: qucs-s: Update to 0.0.20. 
* gnu/packages/engineering.scm (qucs-s): Update to 0.0.20.
[arguments]: Modify patch-paths phase to work with version 0.0.20.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Theodoros Foradis fc3c88ec9c
gnu: lapack-3.5: Delete package. 
* gnu/packages/maths.scm (lapack-3.5): Delete package.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Theodoros Foradis ac04601a82
gnu: xyce-serial: Update to 6.8. 
* gnu/packages/engineering.scm (xyce-serial): Update to 6.8.
[inputs]: Replace lapack-3.5 with lapack.
* gnu/packages/engineering.scm (xyce-prallel):
[arguments]: Update configure flags to work with 6.8 version.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Theodoros Foradis d73482b408
gnu: trilinos-serial-xyce: Update to 12.12.1. 
* gnu/packages/engineering.scm (trilinos-serial-xyce): Update to 12.12.1.
[arguments]: Add delete-tribits phase.
[inputs]: Replace lapack-3.5 with lapack.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Theodoros Foradis ecf8d2a935
gnu: libngspice: Update to 27. 
* gnu/packages/engineering.scm (libngspice): Update to 27.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Theodoros Foradis 4f12a62d18
gnu: qucs: Build from git to fix bug. 
* gnu/packages/engineering.scm (qucs): Add TODO comment.
[source]: Use git commit b4f27d9.
[native-inputs]: Add autoconf, automake, flex and bison.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:34 +02:00
Ricardo Wurmus bcc2e0ed2e
gnu: r-rcas: Update to 1.6.0. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.6.0.
[source]: Fetch from bioconductor.
[native-inputs]: Remove r-knitr.
[propagated-inputs]: Add r-biocgenerics, r-biostrings, r-cowplot, r-dbi,
r-ggseqlogo, r-knitr, r-pheatmap, r-proxy, r-rsqlite, and r-s4vectors.
 2018-06-07 22:51:00 +02:00
Ricardo Wurmus e67acae706
gnu: Add r-ggseqlogo. 
* gnu/packages/cran.scm (r-ggseqlogo): New variable.
 2018-06-07 22:51:00 +02:00
Rutger Helling 8ec919404f
gnu: Add deprecated-package vulkan-icd-loader. 
* gnu/packages/vulkan.scm (vulkan-icd-loader): New variable.
 2018-06-07 13:34:13 +02:00
Efraim Flashner bb63502f0b
gnu: ovmf: Simplify build. 
* gnu/packages/firmware.scm (ovmf)[arguments]: Change custom 'build-ia32
phase to replace 'build. Remove unneeded substitutions in 'configure,
'build and 'build-x64. Shorten 'build and 'build-x64 phases.
 2018-06-07 12:20:47 +03:00
Ricardo Wurmus 6d095c4cab
gnu: star: Update to 2.6.0c. 
* gnu/packages/bioinformatics.scm (star): Update to 2.6.0c.
[source]: Fetch from git.
 2018-06-07 11:09:54 +02:00
Ricardo Wurmus 54179e2463
gnu: libreoffice: Update to 6.0.5.1. 
* gnu/packages/patches/libreoffice-icu.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libreoffice.scm (libreoffice): Update to 6.0.5.1.
[source]: Add patch.
[inputs]: Add libepubgen and libqxp.
[arguments]: Adjust "prepare-src" phase.
 2018-06-07 11:09:54 +02:00
Ricardo Wurmus e47e1f3311
gnu: orcus: Update to 0.13.4. 
* gnu/packages/libreoffice.scm (orcus): Update to 0.13.4.
 2018-06-07 11:09:54 +02:00
Ricardo Wurmus a3f2425e5d
gnu: ixion: Update to 0.13.0. 
* gnu/packages/libreoffice.scm (ixion): Update to 0.13.0.
 2018-06-07 11:09:54 +02:00
Ricardo Wurmus 4e4dcd476e
gnu: Add libqxp. 
* gnu/packages/libreoffice.scm (libqxp): New variable.
 2018-06-07 11:09:54 +02:00
Ricardo Wurmus 38be0f4245
gnu: Add libepubgen. 
* gnu/packages/libreoffice.scm (libepubgen): New variable.
 2018-06-07 11:09:54 +02:00
Adam Zimmerman d6dd64af37
gnu: opensmtpd: Fix crash on table authentication. 
* gnu/packages/patches/opensmtpd-fix-crash.patch: New patch.
* gnu/packages/mail.scm (opensmtpd)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2018-06-07 03:57:42 +02:00
Tobias Geerinckx-Rice 6acc671bef
gnu: jbig2dec: Update source and home page URIs. 
The old downloads.ghostscript.com returns a bogus 200 response, while
the new home page lists a different source.

Reported by Gábor Boskovits <boskovits@gmail.com>.

* gnu/packages/image.scm (jbig2dec)[source, home-page]: Update URIs.
 2018-06-07 03:57:41 +02:00
Nicolas Goaziou 4a007e2db9
gnu: scribus: Fix build. 
* gnu/packages/scribus.scm (scribus)[arguments]: Re-introduce fix for
  "ImportError: No module named _sysconfigdata_nd".
 2018-06-07 00:30:13 +02:00
Ricardo Wurmus 116ca65b58
Merge branch 'master' into core-updates 2018-06-06 22:43:37 +02:00
Nicolas Goaziou 25133ca172
gnu: colobot: Update to 0.1.11.1-alpha. 
* gnu/packages/games.scm (colobot): Update to 0.1.11.1-alpha.
[native-inputs]: Update "colobot-data" and "colobot-music" to 0.1.11.1-alpha.
 2018-06-06 19:16:21 +02:00
Nicolas Goaziou 89a651964a
gnu: scribus: Add "libzmf" dependency 
* gnu/packages/scribus.scm (scribus)[inputs]: Add "libzmf".
 2018-06-06 18:34:45 +02:00