a1eb8be8ca
gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml.
...
These are ghc-8.4-bundled packages, removing to avoid build
conflicts.
* gnu/packages/haskell.scm (ghc-parsec, ghc-stm, ghc-text): Remove.
* gnu/packages/haskell-web.scm (ghc-xhtml): Remove.
* gnu/packages/agda.scm (agda)[inputs]: Remove ghc-stm and ghc-text.
* gnu/packages/bioinformatics.scm (ngless)[inputs]: Remove ghc-parsec and
ghc-text.
* gnu/packages/haskell-apps.scm (darcs)[inputs]: Remove ghc-parsec.
(git-annex)[inputs]: Remove ghc-stm and ghc-text.
(ghc-sdl2)[inputs]: Remove ghc-text.
(ghc-sdl2-image)[inputs]: Remove ghc-text.
* gnu/packages/haskell-check.scm (ghc-tasty-ant-xml)[inputs]: Remove ghc-stm.
(ghc-tasty)[inputs]: Remove ghc-stm.
(ghc-tasty-rerun)[inputs]: Same.
(ghc-quickcheck-instances)[inputs]: Remove ghc-text.
(ghc-hedgehog)[inputs]: Remove ghc-stm.
* gnu/packages/haskell-crypto.scm (ghc-asn1-encoding)[inputs]: Remove
ghc-text.
* gnu/packages/haskell-web.scm (ghc-tagsoup)[inputs]: Remove ghc-text.
(ghc-cookie)[inputs]: Same.
(ghc-http-types)[inputs]: Same.
(ghc-http)[inputs]: Remove ghc-parsec.
(ghc-http-client)[inputs]: Remove ghc-text.
(ghc-http2)[inputs]: Remove ghc-stm.
(ghc-http-conduit)[native-inputs]: Remove ghc-text.
(ghc-wai)[inputs]: Same.
(ghc-wai-extra)[inputs]: Same.
(ghc-warp)[inputs]: Remove ghc-stm and ghc-text.
(ghc-xss-sanitize)[native-inputs]: Remove ghc-text.
(ghc-css-text)[inputs]: Same.
(ghc-mime-types)[inputs]: Same.
(ghc-blaze-html)[inputs]: Same.
(ghc-aeson)[inputs]: Same.
(ghc-aeson-pretty)[inputs]: Same.
(ghc-aeson-qq)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-multipart)[inputs]: Remove ghc-parsec.
(ghc-uri-encode)[inputs]: Remove ghc-text.
(ghc-path-pieces)[inputs]: Same.
(ghc-yesod-core)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-yesod-persistent)[inputs]: Remove ghc-text.
(ghc-yesod-form)[inputs]: Same.
(ghc-yesod)[inputs]: Same.
(ghc-hxt-regex-xmlschema)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-hxt)[inputs]: Remove ghc-parsec.
* gnu/packages/haskell.scm (ghc-convertible)[inputs]: Remove ghc-text.
(ghc-double-conversion)[inputs]: Same.
(ghc-tree-diff)[inputs]: Remove ghc-parsec and ghc-text.
[native-inputs]: Remove ghc-parsec.
(ghc-cgi)[inputs]: Remove ghc-parsec.
(hlint)[inputs]: Remove ghc-text.
(ghc-openglraw)[inputs]: Remove ghc-text.
(ghc-opengl)[inputs]: Same.
(ghc-streaming-commons)[inputs]: Remove ghc-stm and ghc-text.
(ghc-hackage-security)[inputs]: Remove ghc-parsec.
(cabal-install)[inputs]: Remove ghc-stm.
(ghc-parsec-numbers)[inputs]: Remove ghc-parsec.
(ghc-safesemaphore)[inputs]: Remove ghc-stm.
(ghc-text-binary)[inputs]: Remove ghc-text.
(ghc-hashable)[inputs]: Remove ghc-text.
(ghc-transformers-base)[inputs]: Remove ghc-stm.
(ghc-indents)[inputs]: Remove ghc-parsec.
(ghc-regex-tdfa-rc)[inputs]: Same.
(ghc-regex-tdfa-text)[inputs]: Same.
(ghc-regex)[inputs]: Remove ghc-text.
(ghc-parsers)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-attoparsec)[inputs]: Remove ghc-text.
(ghc-attoparsec-bootstrap)[inputs]: Same.
(ghc-zip-archive)[inputs]: Same.
(ghc-polyparse)[inputs]: Same.
(ghc-reducers)[inputs]: Same.
(ghc-xml)[inputs]: Same.
(ghc-feed)[inputs]: Same.
(ghc-exceptions)[inputs]: Remove ghc-stm.
(ghc-case-insensitive)[inputs]: Remove ghc-text.
(ghc-megaparsec)[inputs]: Same.
(ghc-network-uri)[inputs]: Remove ghc-parsec.
(ghc-monad-control)[inputs]: Remove ghc-stm.
(ghc-blaze-builder)[inputs]: Remove ghc-text.
(ghc-blaze-markup)[inputs]: Same.
(ghc-async)[inputs]: Remove ghc-stm.
(ghc-invariant)[inputs]: Same.
(ghc-statevar)[inputs]: Same.
(ghc-lens)[inputs]: Remove ghc-text.
(ghc-cheapskate)[inputs]: Same.
(ghc-semigroups)[inputs]: Same.
(ghc-semigroups-bootstrap)[inputs]: Same.
(ghc-fast-logger)[inputs]: Same.
(ghc-scientific)[inputs]: Same.
(ghc-scientific-bootstrap)[inputs]: Same.
(ghc-texmath)[inputs]: Remove ghc-parsec.
(ghc-highlighting-kate)[inputs]: Same.
(ghc-cmark)[inputs]: Remove ghc-text.
(ghc-cmark-gfm)[inputs]: Same.
(ghc-th-lift-instances)[inputs]: Same.
(ghc-yaml)[inputs]: Same.
(ghc-hslua)[inputs]: Same.
(ghc-hslua-module-text)[inputs]: Same.
(ghc-skylighting-core)[inputs]: Same.
(ghc-doctemplates)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-pandoc)[inputs]: Same.
(ghc-typed-process)[inputs]: Remove ghc-stm.
(ghc-conduit-extra)[inputs]: Remove ghc-stm and ghc-text.
(ghc-xml-types)[inputs]: Remove ghc-text.
(ghc-xml-conduit)[inputs]: Same.
(ghc-pandoc-citeproc)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-regex-tdfa)[inputs]: Remove ghc-parsec.
(ghc-wl-pprint-text)[inputs]: Remove ghc-text.
(ghc-graphviz)[inputs]: Same.
(ghc-system-filepath-bootstrap)[inputs]: Same.
(ghc-system-fileio-bootstrap)[inputs]: Same.
(ghc-shelly)[inputs]: Same.
(ghc-chell)[inputs]: Same.
(ghc-system-filepath)[inputs]: Same.
(ghc-system-fileio)[inputs]: Same.
(ghc-fsnotify)[inputs]: Same.
(ghc-json)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-esqueleto)[inputs]: Remove ghc-text.
(shellcheck)[inputs]: Remove ghc-parsec.
(ghc-errors)[inputs]: Remove ghc-text.
(ghc-chunked-data)[inputs]: Same.
(ghc-uuid-types)[inputs]: Same.
(ghc-uuid)[inputs]: Same.
(ghc-rebase)[inputs]: Remove ghc-stm and ghc-text.
(ghc-foldl)[inputs]: Remove ghc-text.
(ghc-mono-traversable)[inputs]: Same.
(ghc-conduit-combinators)[inputs]: Same.
(ghc-aws)[inputs]: Same.
(ghc-stm-chans)[inputs]: Remove ghc-stm.
(ghc-monad-logger)[inputs]: Remove ghc-text and ghc-stm.
(ghc-shakespeare)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-resource-pool)[inputs]: Remove ghc-stm.
(ghc-attoparsec-iso8601)[inputs]: Remove ghc-text.
(ghc-http-api-data)[inputs]: Same.
(ghc-persistent)[inputs]: Same.
(ghc-aeson-compat)[inputs]: Same.
(ghc-persistent-template)[inputs]: Same.
(ghc-unliftio)[inputs]: Remove ghc-stm.
(ghc-persistent-sqlite)[native-inputs]: Remove ghc-text.
(ghc-bytes)[inputs]: Same.
(ghc-missingh)[inputs]: Remove ghc-parsec.
(ghc-rio)[inputs]: Remove ghc-text.
(ghc-cairo)[inputs]: Same.
(ghc-atomic-write)[inputs]: Remove ghc-text.
[native-inputs]: Same.
(ghc-stm-conduit)[inputs]: Remove ghc-stm.
(ghc-conduit-algorithms)[inputs]: Same.
(ghc-interpolate)[native-inputs]: Remove ghc-text.
(ghc-hpack)[inputs]: Same.
(ghc-inline-c)[inputs]: Remove ghc-parsec.
(ghc-configurator)[inputs]: Remove ghc-text.
(ghc-c2hs)[native-inputs]: Same.
(ghc-libmpd)[inputs]: Same.
(ghc-concurrent-output)[inputs]: Remove ghc-stm.
* gnu/packages/idris.scm (idris)[inputs]: Remove ghc-text.
* gnu/packages/wm.scm (xmobar)[inputs]: Remove ghc-parsec and ghc-stm.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-07 22:05:29 -04:00
e07f765558
import: hackage: Update list of ghc-included packages.
...
It turns out the list in the release notes is incomplete.
This updates the list from /gnu/store/<hash>-ghc-8.4.3/lib/ghc-8.4.3.
* guix/import/hackage.scm (ghc-standard-libraries): Update list.
2019-08-07 22:05:29 -04:00
cce84c34cd
gnu: Add ghc-8.6.
...
* gnu/packages/haskell.scm (ghc-8.6): New variable.
Co-authored-by: Timothy Sample <samplet@ngyro.com>
2019-08-07 22:05:29 -04:00
a62ddb748f
gnu: ghc-8: Rename to 'ghc-8.4'.
...
* gnu/packages/haskell.scm (ghc-8): Rename to...
(ghc-8.4): ...this.
(ghc-8): New variable.
2019-08-07 22:05:23 -04:00
ba7ff983d6
gnu: wpa-supplicant: Update to 2.9.
...
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.9.
2019-08-08 00:30:56 +02:00
277faff8ff
gnu: xf86-video-intel: Update to 2.99.917-14.6f4972d.
...
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-14.6f4972d.
2019-08-08 00:30:56 +02:00
d84e9b75b2
machine: Add 'build-locally?' field for managed hosts.
...
* gnu/machine/ssh.scm (machine-ssh-configuration-build-locally?): New
variable.
(managed-host-remote-eval): Pass 'build-locally?' to 'remote-eval'.
2019-08-07 18:29:07 -04:00
9bd1333e58
Merge remote-tracking branch 'origin/master' into wip-texlive
2019-08-07 22:26:55 +02:00
55e238f2ab
deploy: Use all machine modules when loading deployment
...
* guix/scripts/deploy.scm (load-source-file): Enumerate and include all
submodules of (gnu machine) when loading the provided deployment
specification.
2019-08-07 16:05:58 -04:00
ec12235ce2
reconfigure: Improve tests for system activation.
...
* gnu/tests/reconfigure.scm (run-switch-to-system-test): Assert that
'/run/current-system' points to the activated system, and that new user
accounts specified in the operating system declaration are created.
2019-08-07 15:27:09 -04:00
355ba48c46
gnu: igt-gpu-tools: Rework custom phases.
...
* gnu/packages/admin.scm (igt-gpu-tools)[arguments]: Use custom 'autogen
phase to replace 'bootstrap phase.
2019-08-07 20:06:01 +03:00
72bc58f850
gnu: dosbox: Remove extra build phase.
...
* gnu/packages/emulators.scm (dosbox)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:06:00 +03:00
3192f25948
gnu: zimg: Remove extra build phase.
...
* gnu/packages/image.scm (zimg)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:06:00 +03:00
384242adf1
gnu: leptonica: Remove extra build phase.
...
* gnu/packages/image.scm (leptonica)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:06:00 +03:00
a491856f2a
gnu: ghmm: Remove extra build phase.
...
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:59 +03:00
e3a699380e
gnu: ghmm: Update source file-name field.
...
* gnu/packages/machine-learning.scm (ghmm)[source]: Change 'file-name
field to include '-checkout' string.
2019-08-07 20:05:59 +03:00
1f53fdae82
gnu: dovecot-libsodium-plugin: Remove extra build phase.
...
* gnu/packages/mail.scm (dovecot-libsodium-plugin)[arguments]: Remove
unneeded 'autogen phase.
2019-08-07 20:05:59 +03:00
7b0efd4c32
gnu: dovecot-trees: Remove extra build phase.
...
* gnu/packages/mail.scm (dovecot-trees)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:58 +03:00
02abfcca46
gnu: libetpan: Rework custom phases.
...
* gnu/packages/mail.scm (libetpan)[arguments]: Use custom 'autogen phase
to replace 'boostrap phase.
2019-08-07 20:05:58 +03:00
1d05b683ef
gnu: libmediainfo: Remove extra build phase.
...
* gnu/packages/video.scm (libmediainfo)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:58 +03:00
d05e607c9d
gnu: libsmpeg: Remove extra build phase.
...
* gnu/packages/video.scm (libsmpeg)[arguments]: Remove unnecessary
'autogen phase.
2019-08-07 20:05:57 +03:00
2230039427
gnu: vapoursynth: Remove extra build phase.
...
* gnu/packages/video.scm (vapoursynth)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:57 +03:00
fe7023a744
gnu: i3blocks: Remove extra build phase.
...
* gnu/packages/wm.scm (i3blocks)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:05:57 +03:00
db736ca20c
gnu: ocproxy: Remove extra build phase.
...
* gnu/packages/vpn.scm (ocproxy)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:05:57 +03:00
0d7f282b02
gnu: openconnect: Fix propagated-inputs.
...
* gnu/packages/vpn.scm (openconnect)[inputs]: Move libxml2, gnutls,
zlib ...
[propagated-inputs]: ... to here.
2019-08-07 20:05:56 +03:00
9fa7c20be9
gnu: gnome-maps: Fix runtime error.
...
Fixes <https://bugs.gnu.org/35761 >.
* gnu/packages/geo.scm (gnome-maps)[arguments]: Add lib output of
gnome-online-accounts and geocode-glib to LD_LIBRARY_PATH.
[inputs]: Add gnome-online-accounts:lib.
2019-08-07 19:03:19 +02:00
fdc0688cba
gnu: r-dt: Update to 0.8.
...
* gnu/packages/statistics.scm (r-dt): Update to 0.8.
[propagated-inputs]: Add r-jsonlite.
2019-08-07 12:54:43 +02:00
42a8b01d15
gnu: r-epi: Update to 2.38.
...
* gnu/packages/cran.scm (r-epi): Update to 2.38.
2019-08-07 12:54:43 +02:00
2132e92261
gnu: r-ggpubr: Update to 0.2.2.
...
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.2.
[propagated-inputs]: Add r-rlang.
2019-08-07 12:54:43 +02:00
33af00eea4
gnu: r-tinytex: Update to 0.15.
...
* gnu/packages/cran.scm (r-tinytex): Update to 0.15.
2019-08-07 12:54:43 +02:00
f503ed92d2
gnu: r-servr: Update to 0.15.
...
* gnu/packages/cran.scm (r-servr): Update to 0.15.
2019-08-07 12:54:43 +02:00
18e700517e
gnu: dolphin-emu: Update to commit 24718c1.
...
* gnu/packages/emulators.scm (dolphin-emu): Update to commit 24718c1.
2019-08-07 08:15:28 +02:00
9d52e3f3d5
gnu: linux-libre: Update to 5.2.7.
...
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.7.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-08-07 00:28:32 -04:00
9f90e58c4a
gnu: linux-libre@4.19: Update to 4.19.65.
...
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.65.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-08-07 00:28:30 -04:00
7acea31bbc
gnu: linux-libre@4.14: Update to 4.14.137.
...
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.137.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
2019-08-07 00:28:28 -04:00
2b6c7a7cbc
gnu: linux-libre@4.9: Update to 4.9.188.
...
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.188.
(linux-libre-4.9-pristine-source)[hash]: Update hash.
2019-08-07 00:28:12 -04:00
ad6814557e
gnu: linux-libre@4.4: Update to 4.4.188.
...
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.188.
(linux-libre-4.4-pristine-source)[hash]: Update hash.
2019-08-07 00:23:20 -04:00
f2758945fe
gnu: r-ggplotify: Update to 0.0.4.
...
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.4.
2019-08-06 23:38:22 +02:00
5fe9ce982d
gnu: r-bayestestr: Update to 0.2.5.
...
* gnu/packages/cran.scm (r-bayestestr): Update to 0.2.5.
2019-08-06 23:38:22 +02:00
fd3119db4f
machine: Implement safety checks.
...
* gnu/machine/ssh.scm (machine-check-file-system-availability)
(machine-check-initrd-modules, check-deployment-sanity): New variable.
(deploy-managed-host): Perform safety checks before deploying.
2019-08-06 16:40:25 -04:00
5f04e9f962
reconfigure: Fix GC root installation.
...
Fixes <https://bugs.gnu.org/36942 >.
Reported by ison <ison@airmail.cc>.
guix/scripts/system/reconfigure.scm (install-bootloader-program): Switch
new symlink to the canonical bootloader configuration file.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-08-06 22:21:13 +02:00
d97ce20400
machine: Rename 'system' field.
...
* gnu/machine.scm (machine-system): Delete variable.
(machine-operating-system): New variable.
All callers changed.
* doc/guix.texi (Invoking guix deploy): Use the
'machine-operating-system' accessor rather than 'machine-system'.
2019-08-06 15:48:51 -04:00
5bc751925d
doc: Add note about signing keys.
...
* doc/guix.texi (Invoking guix deploy): Add note explaining that
deployment targets must authorize the coordinator machine's signing key.
2019-08-06 15:16:25 -04:00
ec405a4b01
gnu: perl-hash-merge: Change inputs to propagated-inputs.
...
Clone::Choose is required at runtime, so this input needs to be
propagated. This change fixes the sqitch package.
* gnu/packages/perl.scm (perl-hash-merge)[inputs]: Change to
propagated-inputs.
2019-08-06 19:53:51 +01:00
86445c8e35
gnu: ffmpeg: Update to 4.2.
...
* gnu/packages/video.scm (ffmpeg): Update to 4.2.
[inputs]: Add dav1d.
* gnu/packages/video.scm (ffmpeg-3.4)[arguments]: Adjust inheritance.
2019-08-06 18:59:28 +02:00
b120789193
gnu: r-rsubread: Update to 1.34.6.
...
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.6.
2019-08-06 15:49:00 +02:00
d6158ecb3b
gnu: r-abaenrichment: Update to 1.14.1.
...
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.14.1.
2019-08-06 15:49:00 +02:00
fbe5a0872f
gnu: r-atacseqqc: Update to 1.8.5.
...
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.5.
2019-08-06 15:49:00 +02:00
fcbd8960c2
gnu: r-genomicinteractions: Update to 1.18.1.
...
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.1.
2019-08-06 15:49:00 +02:00
109b8ad5f9
gnu: r-chippeakanno: Update to 3.18.2.
...
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.2.
2019-08-06 15:49:00 +02:00
Robert Vollmert