a3eb8c8191
gnu: Add r-pbkrtest.
...
* gnu/packages/statistics.scm (r-pbkrtest): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
51fc7d8c31
gnu: Add r-lme4.
...
* gnu/packages/statistics.scm (r-lme4): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
c549864d90
gnu: Add r-nloptr.
...
* gnu/packages/statistics.scm (r-nloptr): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
49dc1fa5cb
gnu: Add r-quantreg.
...
* gnu/packages/statistics.scm (r-quantreg): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
545d0789fc
gnu: Add r-matrixmodels.
...
* gnu/packages/statistics.scm (r-matrixmodels): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
aa84100011
gnu: Add r-modelmetrics.
...
* gnu/packages/statistics.scm (r-modelmetrics): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
21cfad44c1
gnu: Add r-rcppeigen.
...
* gnu/packages/statistics.scm (r-rcppeigen): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:06 +10:00
0392f82fd5
gnu: Add r-minqa.
...
* gnu/packages/statistics.scm (r-minqa): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-12 10:28:05 +10:00
5a717a95b3
gnu: wine: Update to 2.3.
...
* gnu/packages/wine.scm (wine): Update to 2.3.
2017-03-12 00:00:25 +01:00
4bff300b53
gnu: Add phonon-backend-gstreamer.
...
* gnu/packages/kde-frameworks.scm (phonon-backend-gstreamer): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 22:23:28 +01:00
5578c2987e
gnu: phonon: Install Qt extensions.
...
* gnu/packages/kde-frameworks.scm (phonon)[arguments]: Add
-DPHONON-INSTALL_QT_EXTENSIONS_INTO_SYSTEM_QT configure flag, and patch the
installation directory.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 22:23:28 +01:00
612af7ff66
gnu: re2: Set CXX for cross-compilation.
...
* gnu/packages/regex.scm (re2)[arguments]: Specify CXX in #:make-flags.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 22:23:28 +01:00
e7b9dac7b1
gnu: cuirass: Update to 0.0.1 revision 5.
...
* gnu/packages/ci.scm (cuirass): Update to 0.0.1 revision 5.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 22:23:28 +01:00
c4b15cb54f
gnu: imagemagick: Update to 6.9.7-10.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-10.
2017-03-11 12:35:57 -05:00
a15638034e
gnu: Add ghc-unexceptionalio.
...
* gnu/packages/haskell.scm (ghc-unexceptionalio): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 12:43:36 +01:00
55fa53491b
gnu: Add emacs-memoize.
...
* gnu/packages/emacs.scm (emacs-memoize): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-03-11 12:43:36 +01:00
c84c8f66f5
gnu: wget: Fix CVE-2017-6508.
...
* gnu/packages/patches/wget-CVE-2017-6508.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/wget.scm (wget)[source]: Use it.
2017-03-10 22:36:58 -05:00
e08ad76658
gnu: Add r-fnn.
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* gnu/packages/statistics.scm (r-fnn): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:55:28 +10:00
7711f61450
gnu: Add r-pbapply.
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* gnu/packages/statistics.scm (r-pbapply): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:51:50 +10:00
d4cebae286
gnu: Add r-vgam.
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* gnu/packages/statistics.scm (r-vgam): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 11:47:02 +10:00
fbf45d6ea7
gnu: vsearch: Update to 2.4.2.
...
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.2.
2017-03-11 11:37:15 +10:00
036cd0cb8b
gnu: Add r-ape.
...
* gnu/packages/bioinformatics.scm (r-ape): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
a409e8b52f
gnu: Add r-fpc.
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* gnu/packages/statistics.scm (r-fpc): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
5da4f84f1f
gnu: Add r-trimcluster.
...
* gnu/packages/statistics.scm (r-trimcluster): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
c0cab38e03
gnu: Add r-robustbase.
...
* gnu/packages/statistics.scm (r-robustbase): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
cda0720805
gnu: Add r-deoptimr.
...
* gnu/packages/statistics.scm (r-deoptimr): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
c962816dc4
gnu: Add r-prabclus.
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* gnu/packages/statistics.scm (r-prabclus): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:26 +10:00
5638e15475
gnu: Add r-mclust.
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* gnu/packages/statistics.scm (r-mclust): New variable.
Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
a1f2668e6c
gnu: Add r-flexmix.
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* gnu/packages/statistics.scm (r-flexmix): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
1721fb4fe7
gnu: Add r-modeltools.
...
* gnu/packages/statistics.scm (r-modeltools): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
d5eca4f9ac
gnu: Add r-diptest.
...
* gnu/packages/statistics.scm (r-diptest): New variable.
Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2017-03-11 10:43:25 +10:00
a2fa9c3d1b
gnu: Add obnam.
...
* gnu/packages/backup.scm (obnam): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-10 22:06:25 +01:00
b500dc2e83
gnu: icestorm: Replace reference in icebox_vlog.
...
* gnu/packages/fpga.scm (icestorm)[arguments]: Add phase
"fix-usr-local" to replace reference to /usr/local/share.
2017-03-10 21:15:39 +01:00
97bede8466
gnu: dub: Update to 1.2.2.
...
* gnu/packages/ldc.scm (dub): Update to 1.2.2.
2017-03-10 19:39:52 +01:00
79f09fa239
gnu: hmmer: Build reproducibly.
...
* gnu/packages/patches/hmmer-remove-cpu-specificity.patch: New file.
* gnu/packages/bioinformatics.scm (hmmer): Use it.
2017-03-10 20:31:30 +10:00
5ded35d89d
gnu: Add sambamba.
...
* gnu/packages/bioinformatics.scm (htslib-for-sambamba, sambamba): New
variables.
2017-03-10 10:13:59 +01:00
fc1428d295
gnu: pidgin: Update to 2.12.0 [fixes CVE-2017-2640].
...
* gnu/packages/messaging.scm (pidgin): Update to 2.12.0.
2017-03-10 01:44:39 -05:00
5c95465e27
gnu: neomutt: Configure with 'lmdb' and 'kyotocabinet'.
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* gnu/packages/mail.scm (neomutt)[configure]: Add '--with-kyotocabinet'
and '--with-lmdb'.
[inputs]: Add 'lmdb' and 'kyotocabinet'.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-03-09 20:36:44 -05:00
469609a987
gnu: neomutt: Update to 20170306.
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* gnu/packages/mail.scm (neomutt): Update to 20170306.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-03-09 20:36:39 -05:00
91c8724165
Revert "gnu: neomutt: Configure with 'lmdb' and 'tokyocabinet'."
...
'kyotocabinet' is more current than tokyocabinet in development
and supported in neomutt aswell.
This reverts commit ef91e2b964
2017-03-09 20:36:32 -05:00
d4f6f78ea3
gnu: hiawatha: Adjust description.
...
* gnu/packages/web.scm (hiawatha)[description]: Adjust it.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-03-09 19:42:16 -05:00
f2a7ce5033
gnu: Add font-tamzen.
...
* gnu/packages/fonts.scm (font-tamzen): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-03-09 19:23:07 -05:00
ff797172b0
gnu: btrfs-progs/static: Correct description.
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* gnu/packages/linux.scm (btrfs-progs/static)[description]: Use the correct
name of the btrfs-progs package and @command{} mark-up.
2017-03-09 23:55:57 +01:00
5595d4c1fd
gnu: btrfs-progs: Update to 4.10.
...
* gnu/packages/linux.scm (btrfs-progs): Update to 4.10.
2017-03-09 23:55:54 +01:00
ab84c13ff0
gnu: ibus-anthy: Update to 1.5.9.
...
* gnu/packages/ibus.scm (ibus-anthy): Update to 1.5.9.
2017-03-09 22:49:38 +01:00
2704f5be09
gnu: ibus: Update to 1.5.15.
...
* gnu/packages/ibus.scm (ibus): Update to 1.5.15.
2017-03-09 22:49:38 +01:00
1b34a47da0
gnu: pius: Update to 2.2.4.
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* gnu/packages/gnupg.scm (pius): Update to 2.2.4.
2017-03-09 22:49:37 +01:00
50b398298f
gnu: youtube-dl: Update to 2017.03.07.
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* gnu/packages/video.scm (youtube-dl): Update to 2017.03.07.
2017-03-09 22:49:37 +01:00
d9e94c6170
gnu: graphicsmagick: Build with 16 bit quantum depth.
...
Octave requires graphicsmagick to be built with 16 bit quantum depth.
* gnu/packages/imagemagick.scm (graphicsmagick)[arguments]: Add
"--with-quantum-depth=16" and "--enable-quantum-library-names"
to #:configure-flags.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-03-09 16:46:12 -05:00
9f91340166
gnu: octave: Build with curl and graphicsmagick.
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* gnu/packages/maths.scm (octave)[inputs]: Add curl and graphicsmagick.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-03-09 16:46:09 -05:00
Raoul Jean Pierre Bonnal