Commit Graph

832 Commits (a56bf101c603aac3c7e2fc47bd8bd025f2ed44a6)

Author SHA1 Message Date
Ben Woodcroft 4732e6ee84
gnu: blast+: Update to 2.6.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.6.0.
[origin]: Remove bundled pcre.  Add patch.
[arguments]: Replace paths in run_with_lock.c.  Configure with pcre.
[inputs]: Add pcre, perl, python.
* gnu/packages/patches/blast+-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-08 12:05:59 +10:00
Marius Bakke d28f90bed9
gnu: python-pyopenssl: Fix test failure on 32-bit platforms.
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl)[source]: Use it.
2017-07-07 18:43:16 +02:00
Ludovic Courtès 7f0980839e
gnu: wget: Fix compilation with Perl 5.26; skip faulty tests.
* gnu/packages/wget.scm (wget)[arguments]: New field.
[source](patches): Add "wget-perl-5.26.patch".
* gnu/packages/patches/wget-perl-5.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-07-07 17:07:16 +02:00
Alex Vong dab536fe1a
gnu: libtiff: Fix CVE-2017-{9936,10688}.
* gnu/packages/patches/libtiff-CVE-2017-9936.patch,
gnu/packages/patches/libtiff-CVE-2017-10688.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-07 00:06:37 -04:00
Kei Kebreau ab104672e1
gnu: xorg-server: Fix CVE-2017-{10971,10972}.
* gnu/packages/patches/xorg-server-CVE-2017-10971.patch,
gnu/packages/patches/xorg-server-CVE-2017-10972.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xorg.scm (xorg-server)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-07-06 23:52:22 -04:00
Efraim Flashner ce7e361fa3
gnu: gemma: Fix building on non-Intel architectures.
* gnu/packages/patches/gemma-intel-compat.patch: New file.
* gnu/packages/bioinformatics.scm (gemma)[source]: Add patch.
[arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures.
* gnu/local.mk (dist_patch_DATA): Register patch.
2017-07-04 22:55:44 +03:00
Arun Isaac 0545e43a91
gnu: gajim: Update to 0.16.8.
* gnu/packages/messaging.scm (gajim): Update to 0.16.8.
[source]: Remove patch.
* gnu/packages/patches/gajim-CVE-2016-10376.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-04 23:07:15 +05:30
宋文武 296bf4d5ab
services: Add 'sysctl-service-type'.
* gnu/services/sysctl.scm: New file.
* doc/guix.texi (Miscellaneous Services): Document it.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2017-07-04 20:40:51 +08:00
Marius Bakke 96bbc41f8b
gnu: python-pyopenssl: Update to 17.1.0.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.1.0.
[source]: Remove patch.
[native-inputs]: Add PYTHON-PRETEND.
[arguments]<#:phases>: Disable the network test here instead of via a patch.
Also disable one new test.
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-07-04 02:52:26 +02:00
Kei Kebreau 85c774808f
gnu: gcr: Enable working tests.
* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Add patches.
* gnu/packages/gnome.scm (gcr)[source]: Use patches.
[arguments]: Enable tests.
2017-07-03 09:52:59 -04:00
Leo Famulari 1abc08a8f4
gnu: shishi: Build with latest libgcrypt.
* gnu/packages/patches/shishi-fix-libgcrypt-detection.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kerberos.scm (shishi)[source]: Use it.
[inputs]: Use libgcrypt instead of libgcrypt-1.5.
[arguments]: Set 'ac_cv_libgcrypt=yes' in #:configure-flags.
* gnu/packages/gnupg.scm (libgcrypt-1.5): Remove variable.
2017-06-30 02:32:57 -04:00
Leo Famulari 1024c8119c
Merge branch 'master' into core-updates 2017-06-29 18:02:17 -04:00
Leo Famulari 92cb946bd9
gnu: intltool: Fix a compatibility issue with Perl 5.26.0.
* gnu/packages/patches/intltool-perl-compatibility.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/glib.scm (intltool)[source]: Use it.
2017-06-29 16:56:16 -04:00
Jelle Licht b786661309
gnu: ansible: Apply experimental patch to deal with wrapping of ansible script.
See <http://lists.gnu.org/archive/html/bug-guix/2017-05/msg00015.html> for the
rationale.

* gnu/packages/patches/ansible-wrap-program-hack.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (ansible)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-06-29 15:21:18 +02:00
Eric Bavier 57dfc9f86c
gnu: screen: Update to 4.6.0.
* gnu/packages/screen.scm (screen): Update to 4.6.0.
[source]: Remove patch.
* gnu/packages/patches/screen-fix-info-syntax-error.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-28 22:59:41 -05:00
Gábor Boskovits c2700e785b
gnu: Add quagga.
* gnu/packages/networking.scm (quagga): New variable.
* gnu/packages/patches/quagga-reproducible-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-06-26 20:37:44 +02:00
Mark H Weaver ed068b960e
Merge branch 'master' into core-updates 2017-06-26 00:00:58 -04:00
Mark H Weaver ffc015bea2
gnu: glibc: Fix replacement on i686.
This is followup to 665d6a5916.
Fixes <https://bugs.gnu.org/27489>.

* gnu/packages/base.scm (glibc-2.25-patched, glibc-2.24, glibc-2.23)
(glibc-2.22): Add glibc-vectorized-strcspn-guards.patch to patches.
Move a comment where it belongs.
* gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch: Swap with ...
* gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch: ... this.
* gnu/packages/patches/glibc-vectorized-strcspn-guards.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.  Fix formatting.
2017-06-25 21:56:22 -04:00
Leo Famulari d17e085a59
gnu: Remove libwmf.
This package contains many security vulnerabilities and is no longer maintained
upstream. See this discussion for more information:

https://lists.gnu.org/archive/html/guix-devel/2017-05/msg00478.html

* gnu/packages/image.scm (libwmf): Remove variable.
* gnu/packages/wv.scm (wv)[inputs]: Remove libwmf.
[arguments]: Remove field.
* gnu/packages/abiword.scm (abiword)[inputs]: Remove libwmf.
[source]: Remove patch 'abiword-wmf-version-lookup-fix.patch'.
* gnu/packages/patches/abiword-wmf-version-lookup-fix.patch,
gnu/packages/patches/libwmf-CAN-2004-0941.patch,
gnu/packages/patches/libwmf-CVE-2006-3376.patch,
gnu/packages/patches/libwmf-CVE-2007-0455.patch,
gnu/packages/patches/libwmf-CVE-2007-2756.patch,
gnu/packages/patches/libwmf-CVE-2007-3472.patch,
gnu/packages/patches/libwmf-CVE-2007-3473.patch,
gnu/packages/patches/libwmf-CVE-2007-3477.patch,
gnu/packages/patches/libwmf-CVE-2009-1364.patch,
gnu/packages/patches/libwmf-CVE-2009-3546.patch,
gnu/packages/patches/libwmf-CVE-2015-0848+CVE-2015-4588.patch,
gnu/packages/patches/libwmf-CVE-2015-4695.patch,
gnu/packages/patches/libwmf-CVE-2015-4696.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-06-24 23:10:28 -04:00
Efraim Flashner 665d6a5916
gnu: glibc: Add mitigations for CVE-2017-1000366.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc-2.25-patched): New variable.
(glibc-2.24, glibc-2.23, glibc-2.22, glibc-2.21)[source]: Add patches.
[replacement]: New field.
(glibc-locales)[replacement]: New field.
* gnu/packages/patches/glibc-CVE-2017-1000366-pt1.patch,
gnu/packages/patches/glibc-CVE-2017-1000366-pt2.patch,
gnu/packages/patches/glibc-CVE-2017-1000366-pt3.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.

Modified-By: Mark H Weaver <mhw@netris.org>
2017-06-24 02:42:37 -04:00
Mark H Weaver d2ba69f315
gnu: guile-ssh: Fix entry in dist_patch_DATA.
Based on a patch by Efraim Flashner <efraim@flashner.co.il>.

* gnu/local.mk (dist_patch_DATA): "gnu" -> "%D%" for
guile-ssh-channel-finalization.patch.
2017-06-24 02:42:17 -04:00
Theodoros Foradis 03d0cc1160
gnu: Add libserialport.
* gnu/packages/electronics.scm: New file.
(libserialport): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-06-24 07:47:38 +02:00
Leo Famulari c57b56722f
gnu: qemu: Fix CVE-2017-9524.
* gnu/packages/patches/qemu-CVE-2017-9524.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu)[source]: Use it.
2017-06-23 16:54:36 -04:00
Roel Janssen f70f3407ca
gnu: Update calibre to 3.0.0.
* gnu/local.mk: Remove patch.
* gnu/packages/ebook.scm (calibre): Update to 3.0.0.
* gnu/packages/patches/calibre-dont-load-remote-icons.patch: Remove file.
2017-06-22 00:07:58 +02:00
Arun Isaac 148585c240
gnu: Move contents of zip module into compression module.
* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
2017-06-20 18:10:35 +05:30
Mark H Weaver 9815739e9b
Merge branch 'master' into core-updates 2017-06-20 00:25:59 -04:00
Leo Famulari 4dd8d28085
gnu: exim: Fix CVE-2017-1000369.
* gnu/packages/patches/exim-CVE-2017-1000369.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (exim)[source]: Use it.
2017-06-19 20:20:54 -04:00
Marius Bakke 200762a44c
gnu: miniupnpc: Update to 2.0.20170509.
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20170509.
[source]: Remove obsolete patch.
* gnu/packages/patches/miniupnpc-CVE-2017-8798.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-18 18:22:06 +02:00
Mark H Weaver 05e26d1ecd
gnu: expat: Eliminate graft.
* gnu/packages/xml.scm (expat): Update to 2.2.1.
[source]: Remove patch.
[replacement]: Remove field.
(expat-2.2.1): Remove variable.
* gnu/packages/patches/expat-CVE-2016-0718-fix-regression.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-18 02:41:58 -04:00
Mark H Weaver 9d4385634d
Merge branch 'master' into core-updates 2017-06-18 02:36:51 -04:00
Leo Famulari 14c7790f1a
gnu: libtiff: Fix several bugs related to improper codec usage [security fixes].
This commit applies the patch to the libtiff package, not the grafting
replacement.

* gnu/packages/patches/libtiff-tiffgetfield-bugs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff)[source]: Use it.
2017-06-15 11:51:59 -04:00
Leo Famulari 8d138ea087
gnu: libtiff: Fix several bugs related to improper codec usage [security fixes].
Fixes CVE-2014-8128, CVE-2015-7554, CVE-2016-5318, CVE-2016-10095, and
the other bugs listed in 'libtiff-tiffgetfield-bugs.patch'.

* gnu/packages/patches/libtiff-tiffgetfield-bugs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff-4.0.8)[source]: Use it.
2017-06-15 11:28:21 -04:00
Leo Famulari 0c5a8007fe
gnu: zziplib: Fix CVE-2017-{5974,5975,5976,5978,5979,5981}.
* gnu/packages/patches/zziplib-CVE-2017-5974.patch,
gnu/packages/patches/zziplib-CVE-2017-5975.patch,
gnu/packages/patches/zziplib-CVE-2017-5976.patch,
gnu/packages/patches/zziplib-CVE-2017-5978.patch,
gnu/packages/patches/zziplib-CVE-2017-5979.patch,
gnu/packages/patches/zziplib-CVE-2017-5981.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/zip.scm (zziplib)[source]: Use them.
2017-06-15 11:12:02 -04:00
Ricardo Wurmus db90eb8c2b
gnu: Add propeller-gcc-4.
* gnu/packages/embedded.scm (propeller-gcc-4): New variable.
* gnu/packages/patches/gcc-4.6-gnu-inline.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-06-15 17:06:47 +02:00
Leo Famulari 75072795bd
gnu: osip: Fix CVE-2017-7853.
* gnu/packages/patches/osip-CVE-2017-7853.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/telephony.scm (osip)[source]: Use it.
2017-06-14 13:16:21 -04:00
Leo Famulari 76cb906083
gnu: perl-net-ssleay: Update to 1.81.
* gnu/packages/tls.scm (perl-net-ssleay): Update to 1.81.
[native-inputs]: Remove 'perl-net-ssleay-disable-ede-test.patch'.
[arguments]: Remove 'apply-patch' phase.
* gnu/packages/patches/perl-net-ssleay-disable-ede-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-14 11:30:08 -04:00
Ludovic Courtès 8e469b67f9
gnu: guile-ssh: Close RREPL channel ports before they are finalized.
Partly fixes <https://bugs.gnu.org/26976>.

* gnu/packages/patches/guile-ssh-channel-finalization.patch: New file.
* gnu/packages/ssh.scm (guile-ssh)[source](patches): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-06-13 23:22:19 +02:00
Marius Bakke a10040e09b
gnu: nss, nss-certs: Update to 3.31.
Release notes:
<https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.31_release_notes>

* gnu/packages/certs.scm (nss-certs): Update to 3.31.
* gnu/packages/gnuzilla.scm (nss): Likewise.
[source]<patches>: Remove upstream 'nss-disable-long-b64-tests' patch.
[arguments]<#:phases>: Move armhf timeout substitution ...
* gnu/packages/patches/nss-increase-test-timeout.patch: ... here.
* gnu/packages/patches/nss-disable-long-b64-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-12 21:31:12 +02:00
nee 1243aaac73
gnu: crawl: Fix savegame upgrades.
* gnu/packages/patches/crawl-upgrade-saves.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/games.scm (crawl)[source]: Apply patch.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-06-12 15:02:23 +05:30
Leo Famulari 34a0984e57
gnu: libmwaw: Fix CVE-2017-9433.
* gnu/packages/patches/libmwaw-CVE-2017-9433.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libreoffice.scm (libmwaw)[source]: Use it.
2017-06-12 01:20:34 -04:00
Marius Bakke 70564e71bd
gnu: fontconfig: Update to 2.12.3.
* gnu/packages/fontutils.scm (fontconfig): Update to 2.12.3.
[source]: Remove obsolete patches.
[native-inputs]: Add GPERF.
[arguments]<#:phases>: Remove obsolete 'fix-tests-for-freetype-2.7.1'
phase. Add 'regenerate-fcobjshash'.
* gnu/packages/patches/fontconfig-charwidth-symbol-conflict.patch,
  gnu/packages/patches/fontconfig-path-max.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-06-11 23:52:39 +02:00
Marius Bakke 75cc8fe9ea
gnu: libextractor: Update to 1.4.
* gnu/packages/gnunet.scm (libextractor): Update to 1.4.
[source]: Remove obsolete patch and snippet.
* gnu/packages/patches/libextractor-ffmpeg-3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-11 15:42:51 +02:00
Marius Bakke 5bace4c8ad
Merge branch 'master' into core-updates
Conflicts:
* gnu/packages/tls.scm (gnutls): Incorporated 3.5.13 graft (88e2511e21).
2017-06-11 02:07:06 +02:00
Marius Bakke 88e2511e21
gnu: gnutls: Replace with 3.5.13.
This update addresses the following security advisories:

GNUTLS-SA-2017-3 (aka CVE-2017-7869) and GNUTLS-SA-2017-4.

See <https://gnutls.org/security.html> and <https://gnutls.org/news.html>.

* gnu/packages/patches/gnutls-skip-pkgconfig-test.patch,
gnu/packages/patches/gnutls-skip-trust-store-test.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register patches.
* gnu/packages/tls.scm (gnutls)[replacement]: New field.
(gnutls-3.5.13): New variable.
(gnutls/guile-2.2)[replacement]: New field. Set #f.
[source]: Inherit from GNUTLS-3.5.13.
2017-06-11 01:08:58 +02:00
Marius Bakke 653569e878
gnu: mesa: Update to 17.1.2.
* gnu/packages/patches/mesa-skip-disk-cache-test.patch: Adjust.
* gnu/packages/patches/mesa-fix-32bit-test-failures.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove deleted file.
* gnu/packages/gl.scm (mesa): Update to 17.1.2.
[source]: Remove obsolete patch.
[inputs]: Add LIBELF.
[native-inputs]: Add WHICH.
[arguments]<#:configure-flags>: Adjust deprecated flag.
2017-06-10 02:59:35 +02:00
Marius Bakke ea45e2c500
Merge branch 'master' into core-updates 2017-06-10 02:57:50 +02:00
ng0 e5eede3fb3
gnu: Rename (gnu packages markdown) to (gnu packages markup).
* gnu/packages/markdown.scm: Rename this ...
* gnu/packages/markup.scm: ... to this.
* gnu-system.am (GNU_SYSTEM_MODULES): Change markdown.scm to markup.scm.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-06-10 00:11:36 +02:00
Ludovic Courtès 202342fdda
gnu: eudev: Update to 3.2.2.
* gnu/packages/linux.scm (eudev): Update to 3.2.2.
[source](patches): Remove "eudev-conflicting-declaration.patch".
* gnu/packages/patches/eudev-conflicting-declaration.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-09 14:59:12 +02:00
Marius Bakke 099c9fdae6
gnu: raptor2: Fix heap overflow bug.
* gnu/packages/patches/raptor2-heap-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/rdf.scm (raptor2): Use it.
2017-06-09 01:16:55 +02:00
Ludovic Courtès dfcd02c0f6
gnu: artanis: Update to 0.2.1.
* gnu/packages/guile.scm (artanis): Update to 0.2.1.
[inputs]: Switch to GUILE-2.2.
[arguments]: Adjust #:make-flags for Guile 2.2.  Take .go files from
lib/guile/2.2.  Add 'wrap-art' phase.
* gnu/packages/patches/artanis-fix-Makefile.in.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-08 23:54:56 +02:00
Ludovic Courtès a8fc8c9ef0
gnu: gcc: Fix libsanitizer cross-compilation to powerpc-linux-gnu.
* gnu/packages/patches/gcc-asan-powerpc-missing-include.patch: New file.
* gnu/packages/gcc.scm (gcc-5)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-06-08 00:26:10 +02:00
Leo Famulari c67d587f94
Merge branch 'master' into core-updates
This merge commit includes a fix for CVE-2017-6512 in Perl 5.26.0.
2017-06-07 12:11:55 -04:00
Leo Famulari 15df12beae
gnu: perl: Fix CVE-2017-6512 in File::Path.
* gnu/packages/perl.scm (perl)[replacement]: New field.
(perl/fixed): New variable.
* gnu/packages/patches/perl-file-path-CVE-2017-6512.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-06-06 20:59:12 -04:00
Arun Isaac a3d3b7a4e1
gnu: Add js-mathjax.
* gnu/packages/javascript.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/javascript.scm (js-mathjax): New variable.
2017-06-05 19:16:06 +05:30
Marius Bakke 00c5e3e5fc
gnu: xf86-input-wacom: Update to 0.34.2.
* gnu/packages/xdisorg.scm (xf86-input-wacom): Update to 0.34.2.
[source]: Remove obsolete patch.
* gnu/packages/patches/xf86-input-wacom-xorg-abi-25.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-06-05 14:58:01 +02:00
Marius Bakke f484a50d50
Merge branch 'staging' 2017-06-05 00:36:11 +02:00
Ludovic Courtès fb976ada5b
gnu: libssh: Update to 0.7.5.
* gnu/packages/ssh.scm (libssh): Update to 0.7.5.
[source](patches): New field.
2017-06-04 23:00:32 +02:00
Manolis Ragkousis 6bf11392f9
gnu: Add openscenegraph.
* gnu/packages/graphics.scm (openscenegraph): New variable.
* gnu/packages/patches/openscenegraph-ffmpeg3.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2017-06-04 21:57:08 +03:00
Leo Famulari 9f825cec1b
Merge branch 'master' into core-updates 2017-06-04 14:56:31 -04:00
Leo Famulari 8b5cb8d054
gnu: qemu: Fix CVE-2017-{8112,8309,8379,8380}.
* gnu/packages/patches/qemu-CVE-2017-8112.patch,
gnu/packages/patches/qemu-CVE-2017-8309.patch,
gnu/packages/patches/qemu-CVE-2017-8379.patch,
gnu/packages/patches/qemu-CVE-2017-8380.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu)[source]: Use them.
2017-06-03 20:50:10 -04:00
Sergei Trofimovich 34cfeca84e
gnu: libgit2: Fix Clar test framework.
This commit reverts 'patch' hack introduced in
a48a1071a6 and fixes bug in the Clar test
framework.

Patch is proposed to Clar upstream as
<https://github.com/vmg/clar/pull/78>.

* gnu/local.mk: Add libgit2-0.25.1-mtime-0.patch.
* gnu/packages/patches/libgit2-0.25.1-mtime-0.patch: New file.
* gnu/packages/version-control.scm (libgit2)[arguments]:
Remove 'apply-patch' phase.
[inputs]: Remove "patch".
[source]: Add 'patches' field.

Signed-off-by: Sergei Trofimovich <slyfox@inbox.ru>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-06-04 00:56:18 +02:00
Marius Bakke d0c45d2d82
Merge branch 'master' into core-updates
Conflicts:
	gnu/packages/image.scm
        (incorporated libtiff graft)
2017-06-03 17:51:21 +02:00
Leo Famulari d6158fe70d
gnu: ghostscript: Switch to Artifex Ghostcript and update to 9.21.
* gnu/packages/ghostscript.scm (ghostscript): Update to 9.21.
[source]: Fetch the source from Artifex.
[native-inputs]: Remove pkg-config.
[inputs]: Add jbig2dec and use libjpeg instead of libjpeg-8.
[arguments]: Add #:configure-flags.
[replacement]: Remove field.
(ghostcript/fixed): Remove variable.
* gnu/packages/patches/ghostscript-CVE-2017-8291.patch,
gnu/packages/patches/ghostscript-runpath.patch: Adjust to new upstream
source.
* gnu/packages/patches/ghostscript-CVE-2013-5653.patch,
gnu/packages/patches/ghostscript-CVE-2015-3228.patch,
gnu/packages/patches/ghostscript-CVE-2016-7976.patch,
gnu/packages/patches/ghostscript-CVE-2016-7978.patch,
gnu/packages/patches/ghostscript-CVE-2016-7979.patch,
gnu/packages/patches/ghostscript-CVE-2016-8602.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2017-06-02 14:13:45 -04:00
John Darrington fb226b4351
gnu: Move vtk to image-processing.scm.
* gnu/packages/image-processing.scm (vtk): New variable.
* gnu/packages/vtk.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-06-02 18:47:06 +02:00
Sergei Trofimovich 9491227dcb
gnu: python-file: Drop outdated patch.
* gnu/local.mk: Remove python-file-double-encoding-bug.patch
* gnu/packages/patches/python-file-double-encoding-bug.patch: Delete file.
* gnu/packages/python.scm (python-file)[source]:
Remove "python-file-double-encoding-bug.patch".

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-06-01 09:14:17 +02:00
Ethan R. Jones 17ce0d45bd
gnu: Add libzen.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* gnu/packages/cpp.scm (libzen): New varible.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-05-31 17:08:45 +02:00
Leo Famulari b0415c0361
gnu: openldap: Fix CVE-2017-9287.
* gnu/packages/patches/openldap-CVE-2017-9287.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap/fixed): New variable.
2017-05-30 18:15:23 -04:00
Kei Kebreau adc5cb1b49
gnu: Add libgdata.
* gnu/packages/gnome.scm (libgdata): New variable.
* gnu/packages/patches/libgdata-fix-tests.patch,
gnu/packages/patches/libgdata-glib-duplicate-tests.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2017-05-30 13:13:16 -04:00
Leo Famulari 4a897c4990
gnu: jasper: Update to 2.0.13.
* gnu/packages/image.scm (jasper): Update to 2.0.13.
[source]: Use GitHub URL and set the file-name. Remove
'jasper-CVE-2017-6850.patch'.
* gnu/packages/patches/jasper-CVE-2017-6850.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-05-29 12:52:30 -04:00
Marius Bakke 6f8cda185e
Merge branch 'master' into staging 2017-05-28 23:47:25 +02:00
Leo Famulari 0fd0bb56a8
gnu: rxvt-unicode: Disable an unwanted code execution vector.
* gnu/packages/patches/rxvt-unicode-escape-sequences.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xdisorg.scm (rxvt-unicode)[source]: Use it.
2017-05-28 14:41:46 -04:00
Leo Famulari 5cd0122e60
gnu: synfigstudio: Fix patch name in 'gnu/local.mk'.
This is a followup to commit 2ac2b17251.

* gnu/local.mk (dist_patch_DATA): Fix typo.
2017-05-28 14:34:43 -04:00
Leo Famulari 22e6656d25
gnu: libtiff: Update replacement to 4.0.8 [security fixes].
See 'ChangeLog' in the source distribution for more information about
the bugs and security issues fixed in this release.

* gnu/packages/image.scm (libtiff)[replacement]: Replace with libtiff-4.0.8.
(libtiff/fixed): Replace with ...
(libtiff-4.0.8): New variable.
* gnu/packages/patches/libtiff-CVE-2017-7593.patch,
gnu/packages/patches/libtiff-CVE-2017-7594.patch,
gnu/packages/patches/libtiff-multiple-UBSAN-crashes.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-05-28 14:34:43 -04:00
Marius Bakke 4953c33316
gnu: libtasn1: Remove obsolete patch.
This is a followup to 6a09628cb1.
(picked from the wrong branch, sorry!)

* gnu/packages/tls.scm (libtasn1)[source]: Remove upstreamed patch.
* gnu/packages/patches/libtasn1-CVE-2017-6891.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-05-28 19:16:43 +02:00
Marius Bakke f0c6dda640
gnu: binutils: Update to 2.28.
* gnu/packages/base.scm (binutils): Update to 2.28.
[source]<patches>: Remove upstreamed patch.
[arguments]<#:configure-flags>: Remove "--disable-werror"
* gnu/packages/patches/binutils-mips-bash-bug.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-05-28 19:08:40 +02:00
Ricardo Wurmus 2ac2b17251
gnu: synfigstudio: Fix UI bug.
* gnu/packages/patches/synfigstudio-fix-ui-with-gtk3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/animation.scm (synfigstudio)[source]: Apply patch.
2017-05-28 15:59:52 +02:00
Marius Bakke 3803b069f6
gnu: gajim: Fix CVE-2016-10376.
* gnu/packages/patches/gajim-CVE-2016-10376.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (gajim)[source]: Use it.
2017-05-28 13:18:24 +02:00
Ricardo Wurmus 21fea1d1a9
gnu: synfigstudio: Update to 1.2.0.
* gnu/packages/patches/synfig-build-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/animation.scm (etl): Update to 0.04.22.
(synfig): Update to 1.2.0.
[source]: Remove patch.
[arguments]: Remove obsolete build phases.
[propagated-inputs]: Add fftw.
(synfigstudio): Update to 1.2.0.
[source]: Remove unnecessary snippet.
[arguments]: Remove.
2017-05-27 22:37:48 +02:00
ng0 574e4e16d8
gnu: Add florence.
* gnu/packages/accessibility.scm: New file.
* gnu/local.mk: (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-05-27 13:35:02 -04:00
Adriano Peluso 48174fb9aa
gnu: Add trytond.
* gnu/packages/tryton.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/tryton.scm (trytond): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-05-27 18:41:12 +05:30
Adriano Peluso b208f71b9b
gnu: Add python-genshi.
* gnu/packages/python.scm (python-genshi, python2-genshi): New variables.
 * gnu/packages/patches/python-genshi-add-support-for-python-3.4-AST.patch: New file.
 * gnu/packages/patches/python-genshi-buildable-on-python-2.7.patch: New file.
 * gnu/packages/patches/python-genshi-disable-speedups-on-python-3.3.patch: New file.
 * gnu/packages/patches/python-genshi-fix-tests-on-python-3.5.patch: New file.
 * gnu/packages/patches/python-genshi-isstring-helper.patch: New file.
 * gnu/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch: New file.
 * gnu/local.mk (dist_patch_DATA): Add them.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-05-27 18:41:12 +05:30
Julien Lepiller ba69e8f7ce
gnu: Add knot-service-type.
* gnu/services/dns.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (DNS Services): New subsubsection.
2017-05-27 10:40:24 +02:00
Mark H Weaver 54d9479d8a
Merge branch 'master' into core-updates 2017-05-27 03:39:12 -04:00
Mark H Weaver 12f37d6015
gnu: graphite2/fixed: Update to 1.3.10.
* gnu/packages/fontutils.scm (graphite2/fixed): Update to 1.3.10.  Remove
patches that have been incorporated upstream.
* gnu/packages/patches/graphite2-CVE-2017-5436.patch,
gnu/packages/patches/graphite2-check-code-point-limit.patch,
gnu/packages/patches/graphite2-fix-32-bit-wrap-arounds.patch,
gnu/packages/patches/graphite2-non-linear-classes-even-number.patch: Delete
files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-05-27 00:22:10 -04:00
Marius Bakke 9df24909e2
Merge branch 'master' into staging 2017-05-27 03:55:24 +02:00
Leo Famulari 38f1163c95
Merge branch 'master' into core-updates 2017-05-24 18:02:27 -04:00
Marius Bakke ce1e6de076
gnu: gnome-shell: Update to 3.24.2.
* gnu/packages/patches/gnome-shell-CVE-2017-8288.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gnome.scm (gnome-shell): Update to 3.24.2.
[source]: Remove patch.
2017-05-24 23:22:39 +02:00
Leo Famulari ff51a87cae
gnu: libtasn1: Fix CVE-2017-6891.
* gnu/packages/patches/libtasn1-CVE-2017-6891.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1)[replacement]: New field.
(libtasn1/fixed): New variable.
2017-05-24 16:57:40 -04:00
Ricardo Wurmus d1a914082b
Merge branch 'master' into core-updates 2017-05-24 12:05:47 +02:00
Ricardo Wurmus 9117448e76
gnu: Remove GCJ.
* gnu/packages/patches/gcj-arm-mode.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Delete it.
* gnu/packages/gcc.scm (javac.in, gcj, ecj-bootstrap): Remove variables.
2017-05-22 18:56:35 +02:00
Leo Famulari 10cb88f85c
gnu: jbig2dec: Fix CVE-2017-{7885,7975,7976}.
* gnu/packages/patches/jbig2dec-CVE-2017-7885.patch,
gnu/packages/patches/jbig2dec-CVE-2017-7975.patch,
gnu/packages/patches/jbig2dec-CVE-2017-7976.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (jbig2dec)[source]: Use them.
2017-05-20 16:26:29 -04:00
Brendan Tildesley d94a99ec66
gnu: calibre: Import unbundle feedparser patch from debian.
* gnu/packages/ebook.scm (calibre)[source]: Reference new patch file.
[inputs]: Add python2-feedparser as an input.
* gnu/packages/patches/calibre-use-packaged-feedparser.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-05-19 23:49:20 +02:00
Brendan Tildesley 7010d231db
gnu: calibre: Import dont-load-icons patch from debian.
* gnu/packages/patches/calibre-dont-load-remote-icons.patch: New file.
* gnu/packages/ebooks.scm (calibre)[source]: Add reference to patch file.
* gnu/local.mk (dist_path_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-05-19 23:49:20 +02:00
Ludovic Courtès e7fbd49132
gnu: guile-ssh: Fix potential double-free/use-after-free issue.
Fixes <http://bugs.gnu.org/26976>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/patches/guile-ssh-double-free.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (guile-ssh)[source](patches): Add it.
2017-05-19 10:50:20 +02:00
Efraim Flashner 7c5cf7a29d
gnu: qtscript: Fix building on aarch64.
* gnu/packages/patches/qtscript-disable-tests.patch: New file.
* gnu/packages/qt.scm (qtscript)[source]: Use it.
* gnu/local.am (dist_patch_DATA): Register it.
2017-05-18 09:49:43 +03:00
Leo Famulari b193fb2851
gnu: shadow: Update to 4.5.
This fixes a regression introduced by the fix for CVE-2017-2616.
See <https://github.com/shadow-maint/shadow/pull/72> for more information.

* gnu/packages/admin.scm (shadow): Update to 4.5.
[source]: Remove patches.
* gnu/packages/patches/shadow-4.4-su-snprintf-fix.patch,
gnu/packages/patches/shadow-CVE-2017-2616.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-05-17 21:20:29 -04:00
Ludovic Courtès 411ba51189
gnu: Add gspell.
* gnu/packages/patches/gspell-dash-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gspell): New variable.

Co-authored-by: humanitiesNerd <catonano@gmail.com>
2017-05-17 16:20:06 +02:00
Ludovic Courtès 6d35b1c99c
gnu: aspell: 'dict-dir' set to ~/.guix-profile/lib/aspell or $ASPELL_DICT_DIR.
See <https://bugs.gnu.org/25836> for background.

* gnu/packages/patches/aspell-default-dict-dir.patch: New file.
* gnu/packages/aspell.scm (aspell)[source](patches): New field.
[native-search-paths]: New field.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-05-17 16:20:06 +02:00
Leo Famulari e7620b649c
gnu: qemu: Fix CVE-2017-7493.
* gnu/packages/patches/qemu-CVE-2017-7493.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu)[source]: Use it.
2017-05-17 07:45:01 -04:00
Mathieu Othacehe b09a8da4a2
bootloader: Add extlinux support.
* gnu/bootloader.scm: New file.
* gnu/bootloader/extlinux.scm: New file.
* gnu/bootloader/grub.scm: New file.
* gnu/local.mk: Build new files.
* gnu/system.scm: Adapt to new bootloader api.
* gnu/scripts/system.scm: Adapt to new bootloader api.
* gnu.scm: Remove (gnu system grub) and replace by (gnu bootloader) and (gnu
bootloader grub) modules.
* gnu/system/grub.scm: Moved content to gnu/bootloader/grub.scm.
* gnu/system/vm: Replace (gnu system grub) module by (gnu bootloader).
* gnu/tests.scm: Ditto.
* gnu/tests/nfs.scm: Ditto.
2017-05-16 14:41:01 +02:00