Commit Graph

36254 Commits (b9c0d5446cbbfa4ab582a9f899821cb168f8c3a0)

Author SHA1 Message Date
Ricardo Wurmus d94c698a13
gnu: r-maldiquant: Update to 1.19.3.
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.19.3.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus 7c97f45700
gnu: r-edger: Update to 3.26.1.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.1.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus 2e2e8d4f9e
gnu: r-dalex: Update to 0.4.
* gnu/packages/cran.scm (r-dalex): Update to 0.4.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus 12242ffb4a
gnu: r-dqrng: Update to 0.2.1.
* gnu/packages/cran.scm (r-dqrng): Update to 0.2.1.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus 2785e61558
gnu: r-repr: Update to 1.0.1.
* gnu/packages/cran.scm (r-repr): Update to 1.0.1.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus ecf4ccb944
gnu: r-gamlss-dist: Update to 5.1-4.
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-4.
2019-05-20 12:00:37 +02:00
Ricardo Wurmus 9e7526ada2
gnu: r-fields: Update to 9.8-1.
* gnu/packages/cran.scm (r-fields): Update to 9.8-1.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus 13f9e5d1be
gnu: r-bigrquery: Update to 1.1.1.
* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.1.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus cb4a6e67da
gnu: r-grimport: Update to 0.9-2.
* gnu/packages/cran.scm (r-grimport): Update to 0.9-2.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus c468cf3094
gnu: r-rcppannoy: Update to 0.0.12.
* gnu/packages/cran.scm (r-rcppannoy): Update to 0.0.12.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus 1aeb0b8de2
gnu: r-ggeffects: Update to 0.10.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.10.0.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus 3585740f14
gnu: r-raster: Update to 2.9-5.
* gnu/packages/cran.scm (r-raster): Update to 2.9-5.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus 720748957e
gnu: r-flextable: Update to 0.5.4.
* gnu/packages/cran.scm (r-flextable): Update to 0.5.4.
2019-05-20 12:00:36 +02:00
Ricardo Wurmus 70a4748bc7
gnu: r-insight: Update to 0.3.0.
* gnu/packages/cran.scm (r-insight): Update to 0.3.0.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus fa8d78df4a
gnu: r-snakecase: Update to 0.10.0.
* gnu/packages/cran.scm (r-snakecase): Update to 0.10.0.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus 394d118dea
gnu: r-zip: Update to 2.0.2.
* gnu/packages/cran.scm (r-zip): Update to 2.0.2.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus 756f2d3527
gnu: r-xfun: Update to 0.7.
* gnu/packages/cran.scm (r-xfun): Update to 0.7.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus 372f65ad94
gnu: r-mice: Update to 3.5.0.
* gnu/packages/cran.scm (r-mice): Update to 3.5.0.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus 1541f0a00c
gnu: r-gower: Update to 0.2.1.
* gnu/packages/cran.scm (r-gower): Update to 0.2.1.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus 7e8ac56afa
gnu: r-progress: Update to 1.2.2.
* gnu/packages/cran.scm (r-progress): Update to 1.2.2.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus bd9f147974
gnu: r-reprex: Update to 0.3.0.
* gnu/packages/cran.scm (r-reprex): Update to 0.3.0.
2019-05-20 12:00:35 +02:00
Ricardo Wurmus c86da03a11
gnu: r-amap: Update to 0.8-17.
* gnu/packages/cran.scm (r-amap): Update to 0.8-17.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 089ac9af76
gnu: r-dendextend: Update to 1.12.0.
* gnu/packages/cran.scm (r-dendextend): Update to 1.12.0.
[propagated-inputs]: Remove r-fpc and r-whisker.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 8bfc6dc507
gnu: r-rvest: Update to 0.3.4.
* gnu/packages/cran.scm (r-rvest): Update to 0.3.4.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 524c71889b
gnu: r-vegan: Update to 2.5-5.
* gnu/packages/cran.scm (r-vegan): Update to 2.5-5.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 33ba81359c
gnu: r-pillar: Update to 1.4.0.
* gnu/packages/cran.scm (r-pillar): Update to 1.4.0.
[propagated-inputs]: Add r-vctrs.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 6004bc1a8f
gnu: Add r-vctrs.
* gnu/packages/cran.scm (r-vctrs): New variable.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus c87a335860
gnu: Add r-zeallot.
* gnu/packages/cran.scm (r-zeallot): New variable.
2019-05-20 12:00:34 +02:00
Ricardo Wurmus 154c2b0bc5
gnu: r-tinytex: Update to 0.13.
* gnu/packages/cran.scm (r-tinytex): Update to 0.13.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus 5da9918ded
gnu: r-heatmaply: Update to 0.16.0.
* gnu/packages/cran.scm (r-heatmaply): Update to 0.16.0.
[propagated-inputs]: Remove r-gplots and r-knitr.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus 40b2f7bc0e
gnu: r-xcms: Update to 3.6.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.1.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus b9a7f9c065
gnu: r-sn: Update to 1.5-4.
* gnu/packages/statistics.scm (r-sn): Update to 1.5-4.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus b02a960275
gnu: r-robustbase: Update to 0.93-5.
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-5.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus 89428ef7fb
gnu: r-ggthemes: Update to 4.2.0.
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.2.0.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus b1b9212d1a
gnu: r-hexbin: Update to 1.27.3.
* gnu/packages/statistics.scm (r-hexbin): Update to 1.27.3.
2019-05-20 12:00:33 +02:00
Ricardo Wurmus c5f6d1798c
gnu: r-segmented: Update to 0.5-4.0.
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-4.0.
2019-05-20 12:00:32 +02:00
Ricardo Wurmus 179a477cd7
gnu: r-rcpparmadillo: Update to 0.9.400.3.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.400.3.0.
2019-05-20 12:00:32 +02:00
Ricardo Wurmus 7762b5825f
gnu: r-batchjobs: Update to 1.8.
* gnu/packages/statistics.scm (r-batchjobs): Update to 1.8.
2019-05-20 12:00:32 +02:00
Ricardo Wurmus 9a6da53fc7
gnu: r-dplyr: Update to 0.8.1.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.1.
2019-05-20 12:00:32 +02:00
Ricardo Wurmus bf5320aaf5
gnu: r-nlme: Update to 3.1-140.
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-140.
2019-05-20 12:00:32 +02:00
Ricardo Wurmus ee7e2ebf61
gnu: r-svglite: Update to 1.2.2.
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.2.
[native-inputs]: Move r-rcpp from here...
[propagated-inputs]: ...to here.
2019-05-20 12:00:28 +02:00
Ludovic Courtès 99f47b53f7
Merge branch 'version-1.0.1' 2019-05-20 11:48:57 +02:00
Pierre Neidhardt 8d036f3ecf
gnu: youtube-dl: Update to 2019.05.11.
* gnu/packages/video.scm (youtube-dl): Update to 2019.05.11.
2019-05-20 11:15:50 +02:00
Pierre Neidhardt 6e0c5fec83
gnu: emacs-evil-collection: Update to 20190519.
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20190519.
2019-05-20 11:14:33 +02:00
Tobias Geerinckx-Rice 0f469c172e
gnu: xf86-video-voodoo: Ship patch locally.
The ORIGIN patch has been modified in place, probably *wild guessing
sounds* by a server-side cgit update.

* gnu/packages/xorg.scm (xf86-video-voodoo)[source]: Use SEARCH-PATCHES.
* gnu/packages/patches/xf86-video-voodoo-pcitag.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-05-20 05:02:26 +02:00
Tobias Geerinckx-Rice 3db907f000
gnu: emacs-idris-mode: Update source hash.
The source tarball was modified in place.  Only file metadata —
specifically: time stamps — differ.

* gnu/packages/emacs-xyz.scm (emacs-idris-mode)[source]: Update sha256.
2019-05-20 04:45:42 +02:00
Tobias Geerinckx-Rice ff281acce2
gnu: texlive-latex-acmart: Update to 1.60.
Forced by source hash change.

* gnu/packages/tex.scm (texlive-latex-acmart): Update to 1.60.
2019-05-20 04:45:42 +02:00
Tobias Geerinckx-Rice b8ae2e9e21
gnu: libu2f-host: Update to 1.1.10.
* gnu/packages/security-token.scm (libu2f-host): Update to 1.1.10.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 813bb1a1da
gnu: s6: Update to 2.8.0.1.
* gnu/packages/skarnet.scm (s6): Update to 2.8.0.1.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 8afab7ed31
gnu: skalibs: Update to 2.8.1.0.
* gnu/packages/skarnet.scm (skalibs): Update to 2.8.1.0.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 873ef5b116
gnu: stunnel: Update to 5.54.
* gnu/packages/web.scm (stunnel): Update to 5.54.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 5cb92d7ed5
gnu: tumbler: Don't use NAME in source URI.
* gnu/packages/xfce.scm (tumbler)[source]: Hard-code NAME.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice e7532c2db8
gnu: tumbler: Update to 0.2.4.
* gnu/packages/xfce.scm (tumbler): Update to 0.2.4.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 08f5f6e821
gnu: garcon: Don't use NAME in source URI.
* gnu/packages/xfce.scm (garcon)[source]: Hard-code NAME.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 7275e56c06
gnu: thunar: Don't use NAME in source URI.
* gnu/packages/xfce.scm (thunar)[source]: Hard-code NAME.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 1438306bd5
gnu: exo: Don't use NAME in source URI.
* gnu/packages/xfce.scm (exo)[source]: Hard-code NAME.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 5da54e8004
gnu: thunar: Update to 1.8.6.
* gnu/packages/xfce.scm (thunar): Update to 1.8.6.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 89d7bb866f
gnu: exo: Update to 0.12.5.
* gnu/packages/xfce.scm (exo): Update to 0.12.5.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice dd5fbf613a
gnu: restic: Update to 0.9.5.
* gnu/packages/backup.scm (restic): Update to 0.9.5.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 558d36e6bf
gnu: wimlib: Update to 1.13.1.
* gnu/packages/backup.scm (wimlib): Update to 1.13.1.
2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice b313665fa0
gnu: Add tpacpi-bat.
* gnu/packages/linux.scm (tpacpi-bat): New public variable.
2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice 7bf28446a5
gnu: Add acpi-call-linux-module.
* gnu/packages/linux.scm (acpi-call-linux-module): New public variable.
2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice e1f640db8f
gnu: Move Linux-Libre modules to their own section.
* gnu/packages/linux.scm (vhba-module): Move to its own section.
2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice 9956812237
gnu: openconnect: Update to 8.03.
* gnu/packages/vpn.scm (openconnect): Update to 8.03.
2019-05-20 01:49:34 +02:00
Ludovic Courtès fb2abbd6f5
gnu: guix: Update to 8204295. 2019-05-19 16:01:47 +02:00
Nicolas Goaziou f5557bde1c
gnu: toutenclic: Update to 7.00.
* gnu/packages/education.scm (toutenclic): Update to 7.00.
[arguments]: Rename executable from "toutenclic.py" to "toutenclic".
2019-05-19 14:44:22 +02:00
Ludovic Courtès 820429517f
gnu: guix: Update to 1.0.1. 2019-05-19 12:25:54 +02:00
Danny Milosavljevic 1d86b05618
vm: Create installation media with MBR and HFS only, no GPT.
* gnu/build/vm.scm (make-iso9660-image): Accept XORRISO,
GRUB-MKRESCUE-ENVIRONMENT.
* gnu/system/vm.scm (iso9660-image): Pass XORRISO; accept
GRUB-MKRESCUE-ENVIRONMENT.
(system-disk-image): Pass GRUB-MKRESCUE-ENVIRONMENT.
* gnu/packages/patches/xorriso-no-mbr-in-inner-efi.patch: New file.
* gnu/packages/patches/xorriso-no-partition-table-in-inner-efi.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/cdrom.scm (xorriso)[source]: Add patches.
[arguments]<#:phases>[install-frontends]:
Add phase.
2019-05-18 18:35:37 +02:00
Leo Famulari 08eafef865
gnu: Borg: Fix a hang in the test suite.
* gnu/packages/patches/borg-fix-hard-link-preloading.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (borg)[source]: Use it.
2019-05-17 07:57:55 -04:00
Rutger Helling 7211073069
gnu: glslang: Update to 7.11.3214.
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3214.
2019-05-17 12:28:38 +02:00
Rutger Helling e3c5ff3e3d
gnu: wine: Update to 4.0.1.
* gnu/packages/wine.scm (wine): Update to 4.0.1.
2019-05-17 12:28:38 +02:00
Mark H Weaver d59c90a5bf
gnu: linux-libre: Update to 5.1.3.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.3.
(%linux-libre-hash): Update hash.
2019-05-17 04:10:51 -04:00
Mark H Weaver e5cb98f5cd
gnu: linux-libre@4.19: Update to 4.19.44.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.44.
(%linux-libre-4.19-hash): Update hash.
2019-05-17 04:09:50 -04:00
Mark H Weaver cce92e0470
gnu: linux-libre@4.14: Update to 4.14.120.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.120.
(%linux-libre-4.14-hash): Update hash.
2019-05-17 04:09:01 -04:00
Mark H Weaver af94698b71
gnu: linux-libre@4.9: Update to 4.9.177.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.177.
2019-05-17 04:07:34 -04:00
Mark H Weaver 4dabdbffac
gnu: linux-libre@4.4: Update to 4.4.180.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.180.
2019-05-17 04:06:49 -04:00
Tobias Geerinckx-Rice f52e83470b
gnu: qd: Update source and home page.
The tarball has been updated in place with only documentation changes.

* gnu/packages/multiprecision.scm (qd)[source]: Update URL and hash.
[home-page]: Update URL.
2019-05-17 04:19:29 +02:00
Tobias Geerinckx-Rice 3dc8b46579
gnu: ripit: Use archived source and home page.
* gnu/packages/cdrom.scm (ripit)[source, home-page]: Use archived URLs.
2019-05-17 04:18:56 +02:00
Tobias Geerinckx-Rice 674495b7e0
gnu: proot: Don't use unstable tarball.
* gnu/packages/linux.scm (proot)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice fc32bc450f
gnu: et: Add FILE-NAME.
* gnu/packages/ssh.scm (et)[source]: Add FILE-NAME.
2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice a36efdbc60
gnu: mlucas: Update source hash.
The tarball was modified in-place with too many small changes to list
here, all of them apparently intended as minor bug fixes.

* gnu/packages/maths.scm (mlucas)[source]: Update sha256.
2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice 8731a4aaff
gnu: jq: Update sources.
* gnu/packages/web.scm (jq)[source]: Update sha256.  Add snippet to
remove newly-bundled onigurama.
2019-05-17 03:05:55 +02:00
Tobias Geerinckx-Rice 9c476e4db5
gnu: kicad-library: Update source URL.
* gnu/packages/engineering.scm (kicad-library)[source]: Update URL.
Re-indent.
2019-05-17 03:05:54 +02:00
Tobias Geerinckx-Rice 8df90c1b23
gnu: foo2zjs: Update source hash.
The tarball was modified in place, adding one line to
foo2zjs/printer-profile.sh:

  ARGYLL_VER=1.6.3
 +ARGYLL_VER=2.1.1
  ARGYLL_ROOT=$HOME/src/Argyll_V${ARGYLL_VER}

* gnu/packages/cups.scm (foo2zjs)[source]: Update sha256.
2019-05-17 03:05:54 +02:00
Tobias Geerinckx-Rice 782e171380
gnu: emacs-idris-mode: Update source hash.
Only file modification times have changed.

* gnu/packages/emacs-xyz.scm (emacs-idris-mode)[source]: Update sha256.
2019-05-17 03:05:54 +02:00
Mark H Weaver 2fb31fd6a2
gnu: icecat: Update to 60.6.3-guix1.
* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.6.3-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
2019-05-16 20:35:31 -04:00
Tobias Geerinckx-Rice 1be06ddac1
gnu: et: Don't use unstable tarball.
This follows up commit ae113b976b (what
looked like a build error was transient file system unrelatedness.)

* gnu/packages/ssh.scm (et)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-05-17 01:48:25 +02:00
Tobias Geerinckx-Rice ae113b976b
gnu: et: Update source hash.
The contents of both archives are identical.

* gnu/packages/ssh.scm (et)[source]: Update sha256.
2019-05-17 01:35:08 +02:00
Tobias Geerinckx-Rice 90c6a46ded
gnu: ephoto: Update source hash.
The contents of both archives are identical.

* gnu/packages/enlightenment.scm (ephoto)[source]: Update sha256.
2019-05-17 01:35:08 +02:00
Nicolas Goaziou 6f8c41958f
gnu: Add nauty.
* gnu/packages/maths.scm (nauty): New variable.
2019-05-16 23:19:08 +02:00
Ricardo Wurmus 481eca8002
gnu: guile-file-names: Update to 0.2.
* gnu/packages/guile-xyz.scm (guile-file-names): Update to 0.2.
[arguments]: Adjust build phase "build-with-guile-2.2" and rename to
"fix-target-directory".
2019-05-16 21:41:24 +02:00
Tobias Geerinckx-Rice c72c10053d
gnu: bind: Update to 9.14.2.
* gnu/packages/dns.scm (isc-bind): Update to 9.14.2.
[source]: Remove patch.
[arguments]: Run only fuzz tests.
* gnu/packages/patches/bind-fix-unused-pk11-ecc-constants.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-05-16 18:21:50 +02:00
Ludovic Courtès 9da2dd90e2
gnu: js-mathjax: Avoid "Too many open files" error while building.
* gnu/packages/javascript.scm (js-mathjax)[arguments]: Add call to
'close-pipe'.  Previously builds would sometimes fail with EMFILE (this
was non-deterministic as it depends on GC activity.)
2019-05-16 17:06:18 +02:00
Ricardo Wurmus e865e0b959
gnu: Add python-leidenalg.
* gnu/packages/graph.scm (python-leidenalg): New variable.
2019-05-16 16:07:06 +02:00
Ricardo Wurmus fbeb92d760
gnu: custom-gcc: Unhide resulting package.
This is a follow-up to commit d78010b81e.  While
the plain "gcc" packages should be hidden by default, gcc-derived packages
like "gfortran" should not.

* gnu/packages/gcc.scm (custom-gcc)[properties]: Remove the 'hidden? property.
2019-05-16 13:45:23 +02:00
Ricardo Wurmus a4ff3255d4
gnu: star: Update to 2.7.1a.
* gnu/packages/bioinformatics.scm (star): Update to 2.7.1a.
2019-05-16 13:45:23 +02:00
Florian Pelz 3e9c80b27a
gnu: network-manager-applet: Patch libnma for modem support.
* gnu/packages/gnome.scm (network-manager-applet): Patch libnma to load
iso-codes and mobile-broadband-provider-info from the store and not require
them in the profile.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-16 13:30:32 +02:00
Nicolas Goaziou 6e633a510c
gnu: grammalecte: Update to 1.1.
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.1.
2019-05-16 10:37:04 +02:00
Tobias Geerinckx-Rice d019c05a42
gnu: loksh: Update to 6.5.
* gnu/packages/shells.scm (loksh): Update to 6.5.
2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice f9f7e28bc4
gnu: cssc: Update to 1.4.1.
* gnu/packages/version-control.scm (cssc): Update to 1.4.1.
2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice e75f87b558
gnu: git-lfs: Update to 2.7.2.
* gnu/packages/version-control.scm (git-lfs): Update to 2.7.2.
2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice f8ea653ea6
gnu: ndctl: Update to 65.
* gnu/packages/disk.scm (ndctl): Update to 65.
2019-05-16 02:40:07 +02:00
Mark H Weaver 294e43a32d
gnu: linux-libre: Update to 5.1.2.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.2.
(%linux-libre-hash): Update hash.
2019-05-15 18:57:11 -04:00
Mark H Weaver 644ccc9011
gnu: linux-libre@4.19: Update to 4.19.43.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.43.
(%linux-libre-4.19-hash): Update hash.
2019-05-15 18:56:17 -04:00
Mark H Weaver 0b67460918
gnu: linux-libre@4.14: Update to 4.14.119.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.119.
(%linux-libre-4.14-hash): Update hash.
2019-05-15 18:55:33 -04:00
Mark H Weaver d9cc8659fc
gnu: linux-libre@4.9: Update to 4.9.176.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.176.
2019-05-15 18:54:44 -04:00
Maxim Cournoyer b8e5de5608
gnu: python-jedi: Update to 0.13.3.
* gnu/packages/python-xyz.scm (python-jedi): Update to 0.13.3.
(python2-jedi): Enable tests.
2019-05-15 17:47:48 -04:00
Tobias Geerinckx-Rice dc555d86e1
gnu: elixir: Update to 1.8.2.
* gnu/packages/elixir.scm (elixir): Update to 1.8.2.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 5a04c993b6
gnu: perl-data-page: Update to 2.03.
* gnu/packages/perl.scm (perl-data-page): Update to 2.03.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 9fb0464c21
gnu: perl-text-csv: Update to 2.00.
* gnu/packages/perl.scm (perl-text-csv): Update to 2.00.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 5af7428b79
gnu: ubridge: Don't use unstable tarball.
* gnu/packages/networking.scm (ubridge)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice e8e2281ee9
gnu: ubridge: Update to 0.9.15.
* gnu/packages/networking.scm (ubridge): Update to 0.9.15.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice fa3040d929
gnu: perl-time-duration: Update to 1.21.
* gnu/packages/perl.scm (perl-time-duration): Update to 1.21.
2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 103cdcd456
gnu: python-django-rq: Update to 1.3.1.
* gnu/packages/django.scm (python-django-rq): Update to 1.3.1.
2019-05-15 21:23:57 +02:00
Danny Milosavljevic 79bfa42287
gnu: Add python-pylzma.
* gnu/packages/python-xyz.scm (python-pylzma): New variable.
(python2-pylzma): New variable.
2019-05-15 15:22:22 +02:00
Marius Bakke ba2d913192
gnu: Remove python2-httpretty.
This package is severely out of date compared to its Python 3 counterpart and
difficult to upgrade.  Since it has no dependents in Guix and Python 2 is
officially deprecated by the end of this year, just remove it.

* gnu/packages/web.scm (python2-httpretty): Remove variable.
2019-05-15 00:22:52 +02:00
Marius Bakke 556530c95c
gnu: vigra, notmuch: Use the Python3 Sphinx variant.
* gnu/packages/image.scm (vigra)[native-inputs]: Change PYTHON2-SPHINX to
PYTHON-SPHINX.
* gnu/packages/mail.scm (notmuch)[native-inputs]: Likewise.
2019-05-15 00:22:51 +02:00
Marius Bakke 75ea39da55
gnu: tbb: Add a source file name.
* gnu/packages/tbb.scm (tbb)[source](file-name): New field.
2019-05-15 00:22:51 +02:00
Marius Bakke b1b74ecffd
gnu: tbb: Update to 2019_U6.
* gnu/packages/tbb.scm (tbb): Update to 2019_U6.
2019-05-15 00:22:51 +02:00
Marius Bakke 128001487f
gnu: samba: Update to 4.10.3.
* gnu/packages/samba.scm (samba): Update to 4.10.3.
2019-05-15 00:22:51 +02:00
Marius Bakke 142a1684a7
gnu: oniguruma: Update to 6.9.2.
* gnu/packages/textutils.scm (oniguruma): Update to 6.9.2.
2019-05-15 00:22:51 +02:00
gabrielhdt 2f8e77bee2
gnu: Add ocaml-odoc.
* gnu/packages/ocaml.scm (ocaml-odoc): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-05-14 21:40:36 +02:00
gabrielhdt 908a2ee0ed
gnu: Add ocaml-bisect-ppx.
* gnu/packages/ocaml.scm (ocaml-bisect-ppx): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-05-14 21:37:57 +02:00
gabrielhdt e2506afcaf
gnu: Add ocaml-tyxml.
* gnu/packages/ocaml.scm (ocaml-tyxml): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-05-14 21:36:34 +02:00
gabrielhdt 38089b549f
gnu: Add ocaml-markup.
* gnu/packages/ocaml.scm (ocaml-markup): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-05-14 21:33:48 +02:00
Julien Lepiller 6b4a6c201a
gnu: python-requests-oauthlib: Fix building.
* gnu/packages/python-web.scm (python-requests-oauthlib)[native-inputs]:
Add python-pyjwt for tests.
2019-05-14 21:20:19 +02:00
Leo Famulari 7bd30ea988
gnu: certbot, python-acme: Update to 0.34.2.
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.34.2.
2019-05-14 15:06:29 -04:00
Julien Lepiller 3617d4f913
gnu: ocaml-base64: Update to 3.2.0.
* gnu/packages/ocaml.scm (ocaml-base64): Update to 3.2.0.
[origin]: Use git-fetch.
(ocaml-piqilib)[origin]: Add a patch to fix building with new
versions of ocaml-base64.
* gnu/packages/patches/ocaml-piqilib-Update-base64.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-05-14 21:05:32 +02:00
Julien Lepiller 9f5a3ba659
gnu: ocaml-tsdl: Update to 0.9.6.
* gnu/packages/ocaml.scm (ocaml-tsdl): Update to 0.9.6.
2019-05-14 21:05:21 +02:00
Julien Lepiller 70a5701141
gnu: ocaml-ocb-stubblr: Fix build failures using it.
* gnu/packages/ocaml.scm (ocaml-ocb-stubblr)[arguments]: Add a phase to
fix guix-specific issues.
2019-05-14 21:05:14 +02:00
Julien Lepiller fbf786bd1d
gnu: ocaml-sqlite3: Update to 4.4.1.
* gnu/packages/ocaml.scm (ocaml-sqlite3): Update to 4.4.1.
[origin]: Use git-fetch.
2019-05-14 21:04:47 +02:00
Julien Lepiller 3cf62cd6cb
gnu: dune: Update to 1.9.3.
* gnu/packages/ocaml.scm (dune): Update to 1.9.3.
2019-05-14 21:04:30 +02:00
Ricardo Wurmus 44323e63a3
gnu: Add ataqv.
* gnu/packages/bioinformatics.scm (ataqv): New variable.
2019-05-14 16:15:19 +02:00
Björn Höfling 46ca002d1c
gnu: burp: Update to 2.3.6.
* gnu/packages/backup.scm (burp):  Update to 2.3.6.
2019-05-14 14:19:19 +02:00
Björn Höfling 91a403a457
gnu: anthy: Update source URI.
* gnu/packages/anthy (anthy)[source]: Update URI.
2019-05-14 14:00:55 +02:00
Björn Höfling 53923b0fb1
gnu: jnettop: Use archived source and homepage.
* gnu/packages/admin.scm (jnettop)[source,home-page]:
Use archive.org mirror.
2019-05-14 14:00:55 +02:00
Björn Höfling 5395cec2c5
gnu: xdot: Update to 1.1.
* gnu/packages/graphviz.scm (xdot): Update to 1.1.
2019-05-14 14:00:54 +02:00
Efraim Flashner 1731b29742
gnu: font-hermit: Download as 'url-fetch/tarbomb'.
* gnu/packages/fonts.scm (font-hermit)[source]: Use 'url-fetch/tarbomb'
method.
[arguments]: Remove custom phases.
2019-05-14 14:47:44 +03:00
LaFreniere, Joseph dcc3d4030f
gnu: Add emacs-evil-cleverparens
* gnu/packages/emacs-xyz.scm (emacs-evil-cleverparens): New
  variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-14 12:11:05 +02:00
Zzull 50867421f9
gnu: Add font-hermit
* gnu/packages/fonts.scm (font-hermit): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-14 12:11:04 +02:00
Ludovic Courtès 8d080506f4
gnu: munge: Pass '--localstatedir=/var'.
Previously, Munge users such as Slurm would fail with:

  squeue: error: Munge encode failed: Failed to access "/gnu/store/…-munge-0.5.13/var/run/munge/munge.socket.2": No such file or directory
  squeue: error: authentication: Socket communication error

* gnu/packages/admin.scm (munge)[source](modules, snippet): New fields.
[arguments]: New field.
2019-05-14 12:11:04 +02:00
Ludovic Courtès 3ea420f337
gnu: hdf5: Add dependency on Perl.
* gnu/packages/maths.scm (hdf5)[native-inputs]: Add PERL.
2019-05-14 12:11:04 +02:00
Ludovic Courtès 549d15712f
gnu: hdf5: Build a thread-safe library.
* gnu/packages/maths.scm (hdf5)[arguments]: Pass "--enable-threadsafe
--with-pthread --enable-unsupported".
2019-05-14 12:11:04 +02:00
Pierre Neidhardt ae5de93ae2
gnu: uncrustify: Update to 0.69.0.
* gnu/packages/code.scm (uncrustify): Update to 0.69.0.
2019-05-14 11:47:08 +02:00
Maxim Cournoyer 112fd34fee
gnu: cqfd: Update to 5.1.0.
* gnu/packages/docker.scm (cqfd): Update to 5.1.0.
[description]: Fix typo.
2019-05-13 21:50:34 -04:00
Julien Lepiller 1bba3e8ca8
gnu: Add harmonist.
gnu/packages/games.scm (harmonist): New variable.
2019-05-13 23:20:00 +02:00
Julien Lepiller 7c1c42c4b6
gnu: go-github.com-nsf-termbox-go: Update to 0.0.0-1.288510b.
* gnu/packages/terminals.scm (go-github.com-nsf-termbox-go): Update to
0.0.0-1.288510b.
2019-05-13 23:19:56 +02:00
Marius Bakke 993d8164e4
gnu: exiv2: Use HTTPS URLs.
* gnu/packages/image.scm (exiv2)[source, home-page]: Use HTTPS.
2019-05-13 14:16:48 +02:00
Marius Bakke 2508b07517
gnu: gpscorrelate: Update home page.
* gnu/packages/gps.scm (gpscorrelate)[source, home-page]: Update for new
maintainer, as noted on <https://github.com/freefoote/gpscorrelate>.
2019-05-13 14:16:48 +02:00
Marius Bakke 1015099d50
gnu: hugin: Update to 2019.0.0.
* gnu/packages/photo.scm (hugin): Update to 2019.0.0.
2019-05-13 14:16:48 +02:00