9e12eba866
gnu: Add python-biom-format.
...
* gnu/packages/bioinformatics.scm (python-biom-format,
python2-biom-format): New variables.
2016-08-06 09:44:28 +10:00
da4ac1aaa4
gnu: Add python-future.
...
* gnu/packages/python.scm (python-future, python2-future): New
variables.
2016-08-06 09:44:28 +10:00
fd34d4f449
gnu: icedtea-8: Update to 3.1.0.
...
Fixes CVE-2016-{3458,3485,3500,3508,3550,3587,3606,3598,3610}.
* gnu/packages/java.scm (icedtea-8): Update to 3.1.0.
[native-inputs]: Add SHENANDOAH-DROP.
2016-08-05 18:43:19 -04:00
2b836df375
gnu: icedtea-7: Update to 2.6.7.
...
Fixes CVE-2016-{3458,3485,3500,3508,3550,3598,3606,3610}.
* gnu/packages/java.scm (icedtea-7): Update to 2.6.7.
2016-08-05 18:43:19 -04:00
00f4690568
services: Add spice vdagent service.
...
* gnu/services/spice.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Various Services): New subheading.
2016-08-05 21:48:43 +02:00
e02cd2b8fe
gnu: spice-vdagent: Set Exec path in spice-vdagent.desktop.
...
* gnu/packages/spice.scm (spice-vdagent): Set Exec path in
spice-vdagent.desktop.
2016-08-05 21:48:43 +02:00
38b9ce44db
gnu: qemu: Enable spice support.
...
* gnu/packages/qemu.scm (qemu)[inputs]: Add SPICE and VIRGLRENDERER.
(qemu-minimal)[inputs]: Remove SPICE and VIRGLRENDERER.
2016-08-05 21:48:43 +02:00
2f04282297
gnu: qemu: Reorder inputs alphabetically.
...
* gnu/packages/qemu.scm (qemu): Reorder inputs alphabetically.
2016-08-05 21:48:43 +02:00
4cc4d363f2
gnu: tor: Update to 0.2.8.6.
...
* gnu/packages/tor.scm (tor): Update to 0.2.8.6.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-08-05 21:18:34 +02:00
a1e0652dd8
gnu: qjson: Remove package.
...
* gnu/packages/qt.scm (qjson): Delete variable.
2016-08-05 21:16:36 +02:00
c744f5c0ad
gnu: Add ircii.
...
* gnu/packages/irc.scm (ircii): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-05 15:10:04 -04:00
e28e74a518
gnu: Add guile-commonmark
...
* gnu/packages/guile.scm (guile-commonmark): New variable.
2016-08-05 09:25:41 +02:00
f467c35261
gnu: tuxguitar: Update to 1.3.2.
...
* gnu/packages/music.scm (tuxguitar): Update to 1.3.2.
[arguments]: Use ant-build-system and rearrange build phases.
[native-inputs]: Remove field.
2016-08-04 21:32:13 +02:00
d77a0bd6f1
ui: Remove dependency on (gnu system file-systems).
...
* guix/ui.scm (specification->file-system-mapping): Move to...
* gnu/system/file-systems.scm (specification->file-system-mapping):
... here.
2016-08-04 19:38:33 +02:00
7912677c1e
gnu: gcc: Reintroduce dependency on Texinfo.
...
This partly reverts 868c13c53a
2016-08-04 19:38:33 +02:00
e686e633ad
gnu: curl: Replace with 7.50.1 [fixes CVE-2016-{3739,4802,5419,5420,5421].
...
* gnu/packages/curl.scm (curl)[replacement]: New field.
(curl-7.50.1): New variable.
2016-08-04 12:57:36 -04:00
7ccb874a29
gnu: zsh: Move to shells.scm.
...
* gnu/packages/zsh.scm (zsh): Move from here ...
* gnu/packages/shells.scm (zsh): ... to here.
* gnu/packages/zsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove zsh.scm.
2016-08-04 08:17:39 -04:00
536fc5f8cd
Merge branch 'core-updates'
2016-08-04 08:17:05 -04:00
0832787e5c
Revert "Merge branch 'core-updates'"
...
This reverts commit 455859a50f
2016-08-04 08:16:38 -04:00
5b098cc4b9
Revert "gnu: zsh: Move to shells.scm."
...
This reverts commit 12b63ab505
2016-08-04 08:16:27 -04:00
8b52167e77
gnu: python-statsmodels: Fix tests.
...
* gnu/packages/statistics.scm (python-statsmodels): Add patch to fix tests.
(python2-statsmodels)[propagated-inputs]: Add python2-pytz.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-08-04 13:40:13 +02:00
6ad08117d9
gnu: gtk-doc: Disable parallel tests.
...
* gnu/packages/gtk.scm (gtk-doc)[arguments]: Disable parallel tests.
2016-08-04 12:46:28 +02:00
9d19e18d24
gnu: gtk-doc: Update to 1.25.
...
* gnu/packages/gtk.scm (gtk-doc): Update to 1.25.
2016-08-04 12:46:28 +02:00
752bb44794
gnu: python2-bz2file: Use python-2.
...
This is a followup to 124df723a0
2016-08-04 20:09:40 +10:00
2470d779c9
gnu: qt: Update to 5.6.1-1.
...
* gnu/packages/qt.scm (qt): Update to 5.6.1-1.
Co-authored-by: David Craven <david@craven.ch>
2016-08-04 09:56:03 +02:00
cce28b0c3a
gnu: qt: Use modify-phases syntax.
...
* gnu/packages/qt.scm (qt): Use modify-phases syntax.
2016-08-04 09:56:03 +02:00
7972d8a2e9
gnu: qtbase: Modify .cmake files to enable modules in different packages.
...
* gnu/packages/qt.scm (qtbase)[arguments]: In the configure phase, modify
.cmake and .cmake.in files so that find_package honors CMAKE_PREFIX_PATH.
2016-08-04 01:19:12 +02:00
0ea179fd92
gnu: Add GCompris.
...
* gnu/packages/education.scm (gcompris): New variable.
2016-08-03 18:50:26 +02:00
134f657318
Merge branch 'version-0.11.0'
2016-08-03 18:37:18 +02:00
97b9da6897
gnu: Add discrover.
...
* gnu/packages/bioinformatics.scm (discrover): New variable.
2016-08-03 17:20:26 +02:00
b7194849ad
Rename references to (gnu packages tcsh).
...
* gnu/packages/algebra.scm, gnu/packages/boost.scm,
gnu/packages/maths.scm, gnu/packages/tex.scm, gnu/packages/vim.scm:
Change broken references to module (gnu packages tcsh) to (gnu packages
shells).
2016-08-03 16:22:31 +02:00
afde1a264b
gnu: fxtract: Restrict to x86_64-linux.
...
* gnu/packages/bioinformatics.scm (fxtract)[supported-systems]: Restrict to
x86_64-linux.
2016-08-03 21:22:02 +10:00
124df723a0
gnu: python-bz2file: Disable tests.
...
* gnu/packages/python.scm (python-bz2file)[arguments]: Disable
tests.
(python2-bz2file)[arguments]: New field.
2016-08-03 21:08:39 +10:00
d76f44e84c
gnu: mdadm: Build without '-Werror'
...
* gnu/packages/linux.scm (mdadm)[arguments]: Add 'remove-W-error'
phase.
2016-08-03 12:10:00 +02:00
8aceca50cd
gnu: guix: Update development snapshot.
...
* gnu/packages/package-management.scm (guix-devel): Update to 4420940
2016-08-03 10:56:45 +02:00
12b63ab505
gnu: zsh: Move to shells.scm.
...
* gnu/packages/zsh.scm (zsh): Move from here ...
* gnu/packages/shells.scm (zsh): ... to here.
* gnu/packages/zsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove zsh.scm.
2016-08-03 04:54:34 +02:00
d754347cb4
gnu: tcsh: Move to shells.scm.
...
* gnu/packages/tcsh.scm (tcsh): Move from here ...
* gnu/packages/shells.scm (tcsh): ... to here.
* gnu/packages/tcsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove tcsh.scm.
2016-08-03 04:54:29 +02:00
9a57d3e6a1
gnu: rc: Move to shells.scm.
...
* gnu/packages/rc.scm (rc): Move from here ...
* gnu/packages/shells.scm (rc): ... to here.
* gnu/packages/rc.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove rc.scm.
2016-08-03 04:54:24 +02:00
618977ae38
gnu: fish: Move to shells.scm.
...
* gnu/packages/fish.scm (fish): Move from here ...
* gnu/packages/shells.scm (fish): ... to here.
* gnu/packages/fish.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove fish.scm.
2016-08-03 04:54:18 +02:00
c356339d62
gnu: Add dash.
...
* gnu/packages/shells.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2016-08-03 04:54:11 +02:00
4420940f20
gnu: guix: Update to 0.11.0.
...
* gnu/packages/package-management.scm (guix-0.10.0): Rename to...
(guix-0.11.0): ... this. Adjust users.
(guix): Set to GUIX-0.11.0.
2016-08-03 01:19:46 +02:00
10618627bf
mapped-devices: raid-device-mapping: Avoid non-top-level 'use-modules'.
...
Fixes <http://bugs.gnu.org/24135 >.
Reported by myglc2 <myglc2@gmail.com>.
* gnu/system/mapped-devices.scm (open-raid-device): Avoid non-top-level
'use-modules' form.
2016-08-03 00:07:06 +02:00
35c4aec88d
build: Add missing procps patch to the distribution.
...
The patch was added to gnu/local.mk in
d46123aade
2016-08-02 23:43:29 +02:00
4e92d76a40
gnu: python-atomicwrites: Update to 1.1.0.
...
* gnu/packages/python.scm (python-atomicwrites, python2-atomicwrites):
Update to 1.1.0.
2016-08-02 16:24:11 -04:00
319ac02b5a
gnu: Add Seren.
...
* gnu/packages/telephony.scm (seren): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-02 22:12:45 +03:00
0a4ebe0148
gnu: Add Elixir.
...
* gnu/packages/elixir.scm: New file.
* gnu/packages/patches/elixir-disable-failing-tests.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add module.
(dist_patch_DATA): Add patch.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2016-08-02 18:31:29 +02:00
deb6482ec6
gnu: libressl: Update to 2.4.2.
...
* gnu/packages/tls.scm (libressl): Update to 2.4.2.
2016-08-02 12:22:59 -04:00
ab3a64507a
system: Define 'GUIX_LOCPATH' to work around 'glibc' package defect.
...
Our 'glibc' package currently ignores /run/current-system/locale,
although the intent is to look for locales in that directory.
* gnu/packages/base.scm (glibc/linux): Add comment about
/run/current-system/locale being ignored.
* gnu/system.scm (operating-system-environment-variables): Add
'GUIX_LOCPATH'.
* gnu/tests/base.scm (run-basic-test): Add "locale" test.
2016-08-02 18:07:19 +02:00
e2b12a55c1
gnu: Add perl-log-any-adapter-log4perl.
...
* gnu/packages/perl.scm (perl-log-any-adapter-log4perl): New variable.
2016-08-02 16:39:08 +02:00
9ec9e49466
gnu: Add perl-log-log4perl.
...
* gnu/packages/perl.scm (perl-log-log4perl): New variable.
2016-08-02 16:39:08 +02:00
cf5e49cdc5
gnu: Add perl-log-any.
...
* gnu/packages/perl.scm (perl-log-any): New variable.
2016-08-02 16:39:08 +02:00
fede3a903e
gnu: Add emacs-visual-fill-column.
...
* gnu/packages/emacs.scm (emacs-visual-fill-column): New variable.
2016-08-02 15:20:43 +02:00
3701f014b1
gnu: ccl: Update to 1.11.
...
* gnu/packages/lisp.scm (ccl): Update to 1.11.
Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-08-02 21:04:56 +08:00
dda3627141
gnu: r-variantannotation: Update to 1.18.6.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.6.
2016-08-02 14:47:46 +02:00
005ca42396
gnu: r-genomationdata: Update to 1.4.2.
...
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.4.2.
2016-08-02 14:47:46 +02:00
7b5fc3a320
gnu: kde-frameworks: Fix version numbers.
...
Fixes a regression introduced in
d26e2b9f30
2016-08-02 14:40:17 +02:00
47e2fe3cdf
gnu: extra-cmake-modules: Add proper 'version'.
...
Fixes a regression introduced in
d26e2b9f30
2016-08-02 14:28:47 +02:00
873b51b340
mapped-devices: Bail out when RAID sources don't show up.
...
* gnu/system/mapped-devices.scm (open-raid-device): Bail out after 20
loop iterations.
2016-08-02 13:53:25 +02:00
7f8ad82bf2
mapped-devices: Make RAID device opening message clearer.
...
* gnu/system/mapped-devices.scm (open-raid-device): Rename 'source' to
'sources'. Make 'waiting' message more informative.
(close-raid-device): Rename 'source' to 'sources'.
2016-08-02 13:53:25 +02:00
dfe06f6e7f
mapped-devices: Do not always use (gnu build file-systems).
...
Fixes <http://bugs.gnu.org/24129 >.
Reported by myglc2 <myglc2@gmail.com>.
* gnu/system/mapped-devices.scm (device-mapping-service-type): Remove
'modules' field from 'shepherd-service' form.
(open-luks-device): Add 'use-modules' form.
2016-08-02 13:53:25 +02:00
d26e2b9f30
gnu: kde-frameworks: Remove kde-frameworks-version.
...
* gnu/packages/kde-frameworks (kde-frameworks-version): Delete variable.
(kwindowsystem)[version]: Replace kde-frameworks-version with version string.
(oxygen-icons)[version]: Replace kde-frameworks-version with version string.
2016-08-02 13:29:47 +02:00
b93502d6ba
gnu: network-manager: Propagate GLIB.
...
* gnu/packages/gnome.scm (network-manager)[propagated-inputs]: Add glib.
2016-08-02 13:28:21 +02:00
cc30a47273
gnu: powwow: Use HTTPS download.
...
* gnu/packages/games.scm (powwow)[source]: Use HTTPS URL.
2016-08-02 11:21:00 +02:00
5f518cadc3
gnu: vdirsyncer: Update to 0.11.3.
...
* gnu/packages/dav.scm (vdirsyncer): Update to 0.11.3.
2016-08-01 21:06:42 -04:00
826a3ca22c
gnu: Add supertux.
...
* gnu/packages/games.scm (supertux): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-01 20:40:20 -04:00
621954ba4e
gnu: htop: Update to 2.0.2.
...
* gnu/packages/admin.scm (htop): Update to 2.0.2.
2016-08-01 19:06:18 -04:00
455859a50f
Merge branch 'core-updates'
2016-08-01 23:30:52 +02:00
a8cb87abe9
install: Add nvi to the image.
...
* gnu/system/install.scm (installation-os)[packages]: Add NVI.
* doc/guix.texi (Proceeding with the Installation): Mention it.
2016-08-01 23:08:48 +02:00
742effef56
gnu: openssh: Update to 7.3p1.
...
* gnu/packages/ssh.scm (openssh): Update to 7.3p1.
[source]: Remove patches.
* gnu/packages/patches/openssh-CVE-2015-8325.patch,
gnu/packages/patches/openssh-CVE-2016-6210-1.patch,
gnu/packages/patches/openssh-CVE-2016-6210-2.patch,
gnu/packages/patches/openssh-CVE-2016-6210-3.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-08-01 14:27:08 -04:00
660e005c21
gnu: red-eclipse: Replace string with version number variable.
...
* gnu/packages/games.scm (red-eclipse)[phases]: Replace it.
2016-08-01 13:42:29 -04:00
a348af403d
gnu: texlive-texmf: Mark as non-substitutable.
...
* gnu/packages/tex.scm (texlive-texmf)[arguments]: Add #:substitutable?.
2016-08-01 19:00:43 +02:00
66c65aafa7
gnu: red-eclipse: Add example server configuration file to config
...
directory.
* gnu/packages/games.scm (red-eclipse)[phases]: Add server configuration
file.
2016-08-01 11:48:39 -04:00
14b865dc3e
gnu: red-eclipse: Update to 1.5.5.
...
* gnu/packages/games.scm (red-eclipse): Update to 1.5.5.
[arguments]: Adjust phases.
[inputs]: Use sdl2.
2016-08-01 11:47:18 -04:00
06438b07b9
gnu: dmidecode: Update to 3.0.
...
* gnu/packages/admin.scm (dmidecode): Update to 3.0.
[arguments]: Use ’modify-phases’ instead of ‘alist-delete’.
2016-08-01 08:55:28 -04:00
a4e6356e11
gnu: Add trio.
...
* gnu/packages/code.scm (trio): New variable.
2016-08-01 14:06:03 +02:00
26af1c8d13
gnu: ruby-ffi: Update to 1.9.14.
...
* gnu/packages/ruby.scm (ruby-ffi): Update to 1.9.14.
2016-08-01 21:30:49 +10:00
7b01f250e4
gnu: ruby-nokogiri: Update to 1.6.8.
...
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.6.8.
[arguments]: Remove 'update-dependency' phase. Add 'patch-extconf' phase.
[native-inputs]: Remove ruby-rake-compiler.
[propagated-inputs]: Add ruby-pkg-config.
2016-08-01 21:30:49 +10:00
2de61e340c
gnu: Add ruby-pkg-config.
...
* gnu/packages/ruby.scm (ruby-pkg-config): New variable.
2016-08-01 21:30:49 +10:00
683a4a34cd
gnu: openssh: Add dependency on xauth.
...
Partly fixes <http://bugs.gnu.org/23317 >.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.
* gnu/packages/ssh.scm (openssh)[inputs]: Add XAUTH.
2016-08-01 11:26:33 +02:00
2be896dec1
gnu: unison: Add input ghostscript.
...
* gnu/packages/ocaml.scm (unison)[native-inputs]: Add ghostscript.
This is a follow-up to commit e83a13faa2
2016-08-01 10:24:07 +02:00
3d337bbc39
Merge branch 'master' into core-updates
2016-07-31 23:27:03 -04:00
4e8efc15fb
gnu: linux-libre@4.1: Update to 4.1.29.
...
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.29.
2016-07-31 23:24:54 -04:00
3920868c0c
gnu: Add libgnomekbd.
...
* gnu/packages/gnome.scm (libgnomekbd): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
cf04df0701
gnu: Add s6-linux-utils.
...
* gnu/packages/skarnet.scm (s6-linux-utils): New variable.
Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
915db95f67
gnu: Add s6-portable-utils.
...
* gnu/packages/skarnet.scm (s6-portable-utils): New variable.
Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
35977a8897
gnu: Add s6-rc.
...
* gnu/packages/skarnet.scm (s6-rc): New variable.
Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
5e74529271
gnu: units: Update to 2.13.
...
* gnu/packages/maths.scm (units): Update to 2.13.
2016-08-01 01:11:57 +02:00
ec91bcb500
gnu: Add Go 1.6.
...
* gnu/packages/golang.scm (go-1.6): New variable.
Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
Co-authored-by: Andy Wingo <wingo@igalia.com>
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
f92d99a5a3
gnu: imagemagick: Update to 6.9.5-4 [fixes CVE-2016-6491].
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-4.
2016-07-31 18:58:19 -04:00
eb3bd6762a
gnu: openttd: Update to 1.6.1.
...
* gnu/packages/games.scm (openttd): Update to 1.6.1 and expand the
package description.
Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-31 22:52:12 +02:00
932b2ea206
gnu: ecl: Use "kernel-headers" instead of "linux-headers" to designate input.
...
* gnu/packages/lisp.scm (ecl)[arguments]: Use "kernel-headers" as the
identifier for an input.
This is a follow-up to commit 55de892b43
2016-07-31 20:13:16 +02:00
42bf34298e
gnu: rapicorn: Add patch to handle isnan.
...
* gnu/packages/patches/rapicorn-isnan.patch: New file.
* gnu/packages/graphics.scm (rapicorn)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2016-07-31 18:16:25 +02:00
acac969fa2
gnu: fastcap: Add input ghostscript.
...
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Add ghostscript.
This is a follow-up to commit e83a13faa2
2016-07-31 17:11:15 +02:00
dceba1c19b
gnu: zsh: Update to 5.2.
...
* gnu/packages/zsh.scm (zsh): Update to 5.2.
2016-07-31 17:05:36 +02:00
ce430bd637
gnu: tcc: Use "kernel-headers" instead of "linux-headers" to designate input.
...
* gnu/packages/c.scm (tcc)[arguments]: Use "kernel-headers" as identifier
for an input.
This is a follow-up to commit 55de892b43
2016-07-31 16:50:12 +02:00
70a967209c
gnu: dealii: Unregister deleted patch.
...
* gnu/local.mk (dist_patch_DATA): Drop deleted patch.
This is a follow-up to commit 101e847294
2016-07-31 16:37:39 +02:00
101e847294
gnu: dealii: Update to 8.4.1.
...
* gnu/packages/maths.scm (dealii): Update to 8.4.1.
* gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-31 15:22:41 +02:00
7b995c7bcb
gnu: wine: Update to 1.9.15.
...
* gnu/packages/wine.scm (wine): Update to 1.9.15.
2016-07-31 12:11:05 +02:00
bb484529cc
gnu: python-alembic: Update to 0.8.7.
...
* gnu/packages/python.scm (python-alembic): Update to 0.8.7.
2016-07-31 11:18:53 +02:00
33906d54c1
gnu: perl-xml-libxml: Update to 2.0128.
...
* gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0128.
2016-07-31 09:55:14 +02:00
Ben Woodcroft