Commit Graph

34630 Commits

Author SHA1 Message Date
pimi 16b0e8da48
gnu: Add r-a3.
gnu/packages/cran.scm (r-a3): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-23 16:26:40 -04:00
pimi 881cc61c1b
gnu: Add r-manipulatewidget.
gnu/packages/cran.scm (r-manipulatewidget): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-23 16:26:40 -04:00
pimi 87b576aa8b
gnu: Add r-slam.
gnu/packages/cran.scm (r-slam): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-23 16:26:40 -04:00
pimi c994418b8c
gnu: Add r-abcanalysis.
gnu/packages/cran.scm (r-abcanalysis): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-23 16:26:40 -04:00
pimi 67cf070239
gnu: Add r-miniui.
gnu/packages/web.scm (r-miniui): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-23 16:26:40 -04:00
Tobias Geerinckx-Rice 694765e1d6
gnu: qjackctl: Update to 0.5.3.
* gnu/packages/audio.scm (qjackctl): Update to 0.5.3.
2018-08-23 17:16:42 +02:00
Tobias Geerinckx-Rice 97353dfb69
gnu: byobu: Update home page.
* gnu/packages/screen.scm (byobu)[home-page]: Update & use HTTPS.
2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice 9e29921162
gnu: byobu: Update to 5.127.
* gnu/packages/screen.scm (byobu): Update to 5.127.
* gnu/packages/patches/byobu-writable-status.patch: Adjust context
accordingly.
2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice f868276b8a
gnu: wine-staging-patchset-data: Don't use unstable archive.
* gnu/packages/wine.scm (wine-staging-patchset-data)[source]:
Use GIT-FETCH and GIT-FILE-NAME.
[native-inputs]: Remove unzip.
[arguments]: Adjust and refactor accordingly.
2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice 574e2ee8ea
gnu: yubico-piv-tool: Update to 1.6.1.
* gnu/packages/security-token.scm (yubico-piv-tool): Update to 1.6.1.
2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice fa5511b6e9
gnu: r-car: Update to 3.0-1.
* gnu/packages/statistics.scm (r-car): Update to 3.0-1.
2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 39bb1cc77a
gnu: r-digest: Update to 0.6.16.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.16.
2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice ed61c44895
gnu: r-dplyr: Update to 0.7.6.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.6.
2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 51dbad04c5
gnu: r-rcpp: Update to 0.12.18.
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.18.
2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 02489a6646
gnu: duplicity: Update to 0.7.18.
* gnu/packages/backup.scm (duplicity): Update to 0.7.18.
2018-08-23 17:16:39 +02:00
Marius Bakke 3ea66dadf6
gnu: boost: Update to 1.68.0.
* gnu/packages/boost.scm (boost): Update to 1.68.0.
[arguments]: Remove /bin/sh substitution.
2018-08-23 14:56:03 +02:00
Marius Bakke bd65ecf460
gnu: boost: Provide libboost_python compatibility symlink.
* gnu/packages/boost.scm (boost)[arguments]: Add phase 'provide-libboost_python'.
2018-08-23 14:56:02 +02:00
Arun Isaac 72816ebed2
gnu: darcs: Update to 2.14.1.
* gnu/packages/version-control.scm (darcs): Update to 2.14.1.
[arguments]: Add patch-sh phase. Enable tests.
2018-08-23 15:51:43 +05:30
Arun Isaac d3c7e70858
gnu: ghc-zlib: Update to 0.6.2.
* gnu/packages/haskell.scm (ghc-zlib): Update to 0.6.2.
2018-08-23 14:43:48 +05:30
Arun Isaac cdccdec1f2
gnu: ghc-quickcheck-instances: Update to 0.3.18.
* gnu/packages/haskell-check.scm (ghc-quickcheck-instances): Update to 0.3.18.
[arguments]: Allow building with newer base-compat.
2018-08-23 14:37:57 +05:30
Arun Isaac f797a0e987
gnu: ghc-graphviz: Update to 2999.20.0.2.
* gnu/packages/haskell.scm (ghc-graphviz): Update to 2999.20.0.2.
[native-inputs]: Add ghc-hspec, graphviz and hspec-discover.
2018-08-23 13:21:23 +05:30
Arun Isaac e173a95ffa
gnu: ghc-wl-pprint-text: Update to 1.2.0.0.
* gnu/packages/haskell.scm (ghc-wl-pprint-text): Update to 1.2.0.0.
[inputs]: Add ghc-base-compat.
2018-08-23 13:21:23 +05:30
Arun Isaac 0fa2c552fc
gnu: ghc-base-compat: Update to 0.10.4.
* gnu/packages/haskell.scm (ghc-base-compat): Update to 0.10.4.
2018-08-23 13:21:23 +05:30
Arun Isaac a3ab433a14
gnu: ghc-fgl-arbitrary: Allow building with newer hspec.
* gnu/packages/haskell.scm (ghc-fgl-arbitrary)[arguments]: Allow building with
newer hspec.
2018-08-23 13:00:53 +05:30
Arun Isaac c4348ca72c
gnu: ghc-shelly: Update to 1.8.1.
* gnu/packages/haskell.scm (ghc-shelly): Update to 1.8.1.
[inputs]: Add ghc-hspec-contrib.
2018-08-23 12:53:47 +05:30
Arun Isaac 66dbe158cf
gnu: ghc-sandi: Update to 0.4.2.
* gnu/packages/haskell.scm (ghc-sandi): Update to 0.4.2.
2018-08-23 12:44:00 +05:30
Arun Isaac b1a1600030
gnu: ghc-fgl: Update to 5.6.0.0.
* gnu/packages/haskell.scm (ghc-fgl): Update to 5.6.0.0.
[arguments]: Allow building with newer hspec.
2018-08-23 12:32:46 +05:30
Mark H Weaver 4e51d3e9ae
gnu: guile-redis: Remove duplicate 'home-page' field.
* gnu/packages/guile.scm (guile-redis): Remove duplicate 'home-page' field.
2018-08-23 02:30:30 -04:00
Mark H Weaver efe2e7506e
gnu: guile-gcrypt: Remove duplicate 'home-page' field.
This is a followup to commit b0cb92b2d4.

* gnu/packages/gnupg.scm (guile-gcrypt): Remove duplicate 'home-page' field.
2018-08-23 02:29:31 -04:00
Mark H Weaver 12dc04d0b4
gnu: linux-libre: Update to 4.18.4.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.4.
(%linux-libre-hash): Update hash.
2018-08-23 02:22:57 -04:00
Mark H Weaver 98dfe06e3e
gnu: linux-libre@4.14: Update to 4.14.66.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.66.
(%linux-libre-4.14-hash): Update hash.
2018-08-23 02:21:28 -04:00
Mark H Weaver bb2efc0384
gnu: linux-libre@4.9: Update to 4.9.123.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.123.
2018-08-23 02:20:44 -04:00
Mark H Weaver 435722f72c
gnu: linux-libre@4.4: Update to 4.4.151.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.151.
2018-08-23 02:20:00 -04:00
Ludovic Courtès b0cb92b2d4
gnu: Add guile-gcrypt.
* gnu/packages/gnupg.scm (guile-gcrypt): New variable.
2018-08-23 00:44:55 +02:00
Leo Famulari 58927996d9
gnu: perl-dbd-mysql: Update to 4.046.
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.046.
[source]: Update URL. Remove 'perl-dbd-mysql-CVE-2017-10788.patch'.
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-22 15:40:08 -04:00
Paul Garlick 414f620fbb
gnu: python-pkgconfig: Enable tests.
* gnu/packages/python.scm (python-pkgconfig)[arguments]: Replace 'check' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-22 15:13:52 -04:00
Paul Garlick 5fab62527c
gnu: python-pkgconfig: Update to 1.3.1.
* gnu/packages/python.scm (python-pkgconfig): Update to 1.3.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-22 15:13:49 -04:00
Leo Famulari 373a9fd4db
gnu: soundtouch: Fix CVE-2018-{1000223,14044,14045}.
* gnu/packages/patches/soundtouch-CVE-2018-14044-14045.patch,
gnu/packages/patches/soundtouch-CVE-2018-1000223.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/audio.scm (soundtouch)[source]: Use them.
2018-08-22 13:38:39 -04:00
Leo Famulari eb88ccf711
gnu: soundtouch: Update to 2.0.0.
* gnu/packages/audio.scm (soundtouch): Update to 2.0.0.
2018-08-22 13:38:39 -04:00
Marius Bakke 233df51ebc
Merge branch 'master' into staging 2018-08-22 18:14:04 +02:00
Marius Bakke 22cf2f4abf
gnu: python-cffi: Update to 1.11.5.
* gnu/packages/libffi.scm (python-cffi): Update to 1.11.5.
2018-08-22 18:01:10 +02:00
Marius Bakke a20016e15a
gnu: python-urllib3: Update to 1.23.
* gnu/packages/python-web.scm (python-urllib3): Update to 1.23.
2018-08-22 18:01:10 +02:00
Marius Bakke 064732bd0c
gnu: python-certifi: Update to 2018.8.13.
* gnu/packages/python-crypto.scm (python-certifi): Update to 2018.8.13.
2018-08-22 18:01:10 +02:00
Marius Bakke 00ffbfd394
gnu: python-idna: Update to 2.7.
* gnu/packages/python.scm (python-idna): Update to 2.7.
2018-08-22 18:01:10 +02:00
Marius Bakke fb76ef8477
gnu: Remove GCC ICE workarounds.
* gnu/packages/patches/doxygen-gcc-ice.patch,
gnu/packages/patches/mariadb-gcc-ice.patch,
gnu/packages/patches/perf-gcc-ice.patch: Delete files
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/databases.scm (mariadb)[source](patches): Likewise.
* gnu/packages/linux.scm (perf)[source](patches): Likewise.
* gnu/packages/documentation.scm (doxygen)[inputs, arguments]: Likewise.
2018-08-22 18:01:09 +02:00
Marius Bakke bf91e6835d
build-system/meson: Strip RUNPATH and remove PatchELF traces.
* guix/build-system/meson.scm (%meson-build-system-modules): Don't
import (guix build rpath).
* guix/build/meson-build-system.scm (fix-runpath): Rename to ...
(shrink-runpath): ... this.  Update docstring.  Remove AUGMENT-RPATH calls and
related code.
(%standard-phases): Add 'shrink-runpath'.
2018-08-22 18:01:09 +02:00
Marius Bakke 43cec3fb1e
gnu: mariadb: Remove huge mysql_embedded executable.
* gnu/packages/databases.scm (mariadb)[arguments]: Adjust deletion regex.
2018-08-22 17:52:40 +02:00
Marius Bakke 22f5c07624
gnu: mariadb: Propagate OpenSSL.
* gnu/packages/databases.scm (mariadb)[inputs]: Move OPENSSL ...
[propagated-inputs]: ... here.
(r-rmysql)[inputs]: Remove OPENSSL.
2018-08-22 17:50:07 +02:00
Leo Famulari 180a8986e5
gnu: ImageMagick: Update to 6.9.10-10.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-10.
2018-08-22 03:25:47 -04:00
Leo Famulari 09efe9af2d
gnu: GraphicsMagick: Update to 1.3.30.
* gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.30.
2018-08-22 03:25:46 -04:00