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Author SHA1 Message Date
Ricardo Wurmus 83e3e72a30
gnu: r-hardyweinberg: Update to 1.6.3. 
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.3.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus 04d42a9de1
gnu: r-mice: Update to 3.6.0. 
* gnu/packages/cran.scm (r-mice): Update to 3.6.0.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus bed3424619
gnu: r-jomo: Update to 2.6-9. 
* gnu/packages/cran.scm (r-jomo): Update to 2.6-9.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus 417f7ed58d
gnu: r-recipes: Update to 0.1.6. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.6.
[propagated-inputs]: Remove r-rcpproll.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus a80620b96d
gnu: r-geometry: Update to 0.4.2. 
* gnu/packages/cran.scm (r-geometry): Update to 0.4.2.
[propagated-inputs]: Add r-linprog.
 2019-08-06 15:48:54 +02:00
Ricardo Wurmus f3640cee10
gnu: Add r-linprog. 
* gnu/packages/cran.scm (r-linprog): New variable.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 099b7c55bb
gnu: r-lava: Update to 1.6.6. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.6.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3337fd1dce
gnu: r-energy: Update to 1.7-6. 
* gnu/packages/cran.scm (r-energy): Update to 1.7-6.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 80cdd36fe8
gnu: r-lpsolve: Update to 5.6.13.2. 
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.2.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 4522ec869b
gnu: r-rcpp: Update to 1.0.2. 
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.2.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus cd7e9fb161
gnu: r-pkgbuild: Update to 1.0.4. 
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.4.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus b89805fe14
gnu: r-haven: Update to 2.1.1. 
* gnu/packages/cran.scm (r-haven): Update to 2.1.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus b44c12057b
gnu: r-curl: Update to 4.0. 
* gnu/packages/cran.scm (r-curl): Update to 4.0.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3e0128ec36
gnu: r-callr: Update to 3.3.1. 
* gnu/packages/cran.scm (r-callr): Update to 3.3.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 6a04f25faf
gnu: r-ellipsis: Update to 0.2.0.1. 
* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.1.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus 710ecc9ceb
gnu: r-clipr: Update to 0.7.0. 
* gnu/packages/cran.scm (r-clipr): Update to 0.7.0.
 2019-08-06 15:48:53 +02:00
Ricardo Wurmus d36430d274
gnu: r-desolve: Update to 1.24. 
* gnu/packages/maths.scm (r-desolve): Update to 1.24.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 17e43c425d
gnu: r-quantreg: Update to 5.42.1. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.42.1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 599fbee5fb
gnu: r-pbapply: Update to 1.4-1. 
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 0910ff0cfc
gnu: r-robust: Update to 0.4-18.1. 
* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.1.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus ddfd0afb2a
gnu: r-mclust: Update to 5.4.5. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.5.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 58aa971fbd
gnu: r-fastica: Update to 1.2-2. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-2.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus db93ef0948
gnu: r-cowplot: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-cowplot): Update to 1.0.0.
[propagated-inputs]: Remove r-plyr; add r-rlang.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus b2fea05954
gnu: r-rngtools: Update to 1.4. 
* gnu/packages/statistics.scm (r-rngtools): Update to 1.4.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 8d84a0ad70
gnu: r-domc: Update to 1.3.6. 
* gnu/packages/statistics.scm (r-domc): Update to 1.3.6.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 862959813f
gnu: r-doparallel: Update to 1.0.15. 
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.15.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 5a01128f45
gnu: r-foreach: Update to 1.4.7. 
* gnu/packages/statistics.scm (r-foreach): Update to 1.4.7.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus b41d03dd35
gnu: r-iterators: Update to 1.0.12. 
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.12.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 90752043dd
gnu: r-rsqlite: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.2.
 2019-08-06 15:48:52 +02:00
Ricardo Wurmus 2de0f885f4
gnu: r-blob: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-blob): Update to 1.2.0.
[propagated-inputs]: Add r-rlang and r-vctrs; remove r-tibble.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus feb261ee9b
gnu: r-rmarkdown: Update to 1.14. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.14.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 6af62ad50a
gnu: r-rcpparmadillo: Update to 0.9.600.4.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.600.4.0.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9b02d1c836
gnu: r-hms: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-hms): Update to 0.5.0.
[propagated-inputs]: Add r-vctrs.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 78896ba23b
gnu: r-devtools: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-devtools): Update to 2.1.0.
[propagated-inputs]: Add r-roxygen2 and r-testthat.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 1df87085e3
gnu: r-git2r: Update to 0.26.1. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.26.1.
[inputs]: Remove libssh2 and openssl; add libgit2.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9236b2c144
gnu: r-httr: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.4.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 3511aff992
gnu: r-openssl: Update to 1.4.1. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus c02bb7e901
gnu: r-checkmate: Update to 1.9.4. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.4.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus b29ecb8e37
gnu: r-xml2: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.1.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 8d932e71d6
gnu: r-coda: Update to 0.19-3. 
* gnu/packages/statistics.scm (r-coda): Update to 0.19-3.
 2019-08-06 15:48:51 +02:00
Ricardo Wurmus 7d36001bd2
gnu: r-dplyr: Update to 0.8.3. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.3.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus eae8e56a64
gnu: r-testthat: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-testthat): Update to 2.2.1.
[propagated-inputs]: Add r-evaluate.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus c2e85d0265
gnu: r-digest: Update to 0.6.20. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.20.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus d6e54e7002
gnu: r-nlme: Update to 3.1-141. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-141.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus ecebfe51ce
gnu: r-foreign: Update to 0.8-72. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-72.
 2019-08-06 15:48:50 +02:00
Ricardo Wurmus 6eccb0879f
gnu: r-boot: Update to 1.3-23. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-23.
 2019-08-06 15:48:50 +02:00
Rutger Helling 49fd98bf65
gnu: faudio: Update to 19.08. 
* gnu/packages/audio.scm (faudio): Update to 19.08.
 2019-08-06 13:09:23 +02:00
Rutger Helling 932f795c0e
gnu: kitty: Update to 0.14.3. 
* gnu/packages/terminals.scm (kitty): Update to 0.14.3.
[inputs]: Add libcanberra.
 2019-08-06 13:06:25 +02:00
Ricardo Wurmus 378d94e51b
Merge remote-tracking branch 'origin/master' into wip-texlive 2019-08-06 10:07:36 +02:00
Brian Leung 6a5198170e
gnu: emacs-ivy: Update to 0.12.0-1.d3e4514. 
* gnu/packages/emacs-xyz.scm (emacs-ivy): Update to 0.12.0-1.d3e4514.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-06 09:41:44 +02:00
Mark H Weaver aac6c53a7b
gnu: libmad: Add more security fixes from Debian. 
Includes fixes for CVE-2017-8372, CVE-2017-8373, and CVE-2017-8374.

Reported by <marit@secmail.pro> in <https://bugs.gnu.org/36909>.

* gnu/packages/patches/libmad-frame-length.patch: Delete file.
* gnu/packages/patches/libmad-length-check.patch,
gnu/packages/patches/libmad-md_size.patch: New files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/mp3.scm (libmad)[source]: Update patches accordingly.
 2019-08-06 03:18:24 -04:00
Rutger Helling b0c48829b6
gnu: flatpak: Update to 1.4.2. 
* gnu/packages/package-management.scm (flatpak): Update to 1.4.2.
 2019-08-06 08:25:35 +02:00
Marius Bakke 2426e2c94c
gnu: strace: Fix test failures on some systems. 
* gnu/packages/patches/strace-ipc-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (strace)[source](patches): New field.
[arguments]: Add 'regenerate-tests' phase.

Co-Authored-By: Mark H Weaver <mhw@netris.org>
 2019-08-06 02:17:38 -04:00
Tobias Geerinckx-Rice 96681d4be1
gnu: terminator: Wrap instead of propagating GSettings schemas. 
* gnu/packages/gnome.scm (terminator)[inputs]:
Move gsettings-desktop-schemas back here…
[propagated-inputs]: …from here.
[arguments]: Add the glib-or-gtk-build-system's ‘glib-or-gtk-wrap’
phase.
 2019-08-05 22:18:57 +02:00
Tobias Geerinckx-Rice 7b88b71120
gnu: libvirt: Update to 5.6.0. 
* gnu/packages/virtualization.scm (libvirt): Update to 5.6.0.
[source]: Remove patch.
* gnu/packages/patches/libvirt-remove-ATTRIBUTE_UNUSED.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-08-05 21:03:31 +02:00
Tobias Geerinckx-Rice d866acca9a
gnu: python-libvirt: Update to 5.6.0. 
* gnu/packages/virtualization.scm (python-libvirt): Update to 5.6.0.
 2019-08-05 21:03:31 +02:00
Mark H Weaver 0fae1b6dee
Revert "gnu: nss: Update to 3.45 [security fixes]." 
This reverts commit 95580bda05.

Note that the security fixes mentioned in that commit were already
present in NSS 3.44.1, which is the version that's now reinstated
by this revert.  The rationale for this revert is that NSS 3.45 fails
to build on armhf-linux.
 2019-08-05 12:45:22 -04:00
Rutger Helling c94884bcc1
gnu: wine: Adapt Intel Vulkan on i686-linux. 
* gnu/packages/wine.scm (wine)[arguments]: Adjust to also provide Vulkan on
i686-linux for Intel.
* gnu/packages/wine.scm (wine64)[arguments]: Adjust to also provide Vulkan on
i686-linux for Intel.
* gnu/packages/wine.scm (wine-staging)[arguments]: Adjust to also provide
Vulkan on i686-linux for Intel.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Adjust to also provide
Vulkan on i686-linux for Intel.
 2019-08-05 16:47:36 +02:00
Brian Leung e15ec8bcec
gnu: emacs-org-super-agenda: Update to 1.1.1-1.375bde4. 
* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda): Update to
1.1.1-1.375bde4.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:19:03 +02:00
Brian Leung 4d48e277ca
gnu: Add emacs-org-sidebar. 
* gnu/packages/emacs-xyz.scm (emacs-org-sidebar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:17:46 +02:00
Brian Leung 003d153783
gnu: emacs-dired-hacks: Update to 0.0.1-2.886befe. 
* gnu/packages/emacs-xyz.scm (emacs-dired-hacks): Update to 0.0.1-2.886befe.
[description]: Use full sentences.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:16:59 +02:00
Brian Leung f94ae7d472
gnu: Add emacs-nswbuff. 
* gnu/packages/emacs-xyz.scm (emacs-nswbuff): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:15:44 +02:00
Brian Leung 12dd1a4838
gnu: Add emacs-company-math. 
* gnu/packages/emacs-xyz.scm (emacs-company-math): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:15:00 +02:00
Brian Leung 16fdde79ec
gnu: Add emacs-math-symbol-lists. 
* gnu/packages/emacs-xyz.scm (emacs-math-symbol-lists): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:13:58 +02:00
Brian Leung c07f3113d9
gnu: Add emacs-hercules. 
* gnu/packages/emacs-xyz.scm (emacs-hercules): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:12:59 +02:00
Brian Leung d052e51b57
gnu: Add emacs-mc-extras. 
* gnu/packages/emacs-xyz.scm (emacs-mc-extras): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:12:09 +02:00
Brian Leung 594d60a3f4
gnu: emacs-nodejs-repl: Update to 0.2.2. 
* gnu/packages/emacs-xyz.scm (emacs-nodejs-repl): Update to 0.2.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:09:52 +02:00
Brian Leung 365e94c019
gnu: emacs-counsel-etags: Update to 1.8.7. 
* gnu/packages/emacs-xyz.scm (emacs-counsel-etags): Update to 1.8.7.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:09:37 +02:00
Brian Leung 10989c59cb
gnu: emacs-lua-mode: Update to 20151025-2.95c64bb. 
* gnu/packages/emacs-xyz.scm (emacs-lua-mode): Update to 20151025-2.95c64bb.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:08:30 +02:00
Brian Leung f48aa64ea8
gnu: emacs-evil-expat: Update to 0.0.1-1.f4fcd0a. 
* gnu/packages/emacs-xyz.scm (emacs-evil-expat): Update to 0.0.1-1.f4fcd0a.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:07:09 +02:00
Brian Leung fef08850b7
gnu: emacs-so-long: Update to 1.0-2.cfae473. 
* gnu/packages/emacs-xyz.scm (emacs-so-long): Update to 1.0-2.cfae473.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:05:26 +02:00
Brian Leung aca6091b05
gnu: emacs-highlight-indentation: Update to 0.7.0-1.d03803f. 
* gnu/packages/emacs-xyz.scm (emacs-highlight-indentation): Update to
0.7.0-1.d03803f.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:04:27 +02:00
Brian Leung 76c2e51017
gnu: Add emacs-dired-toggle-sudo. 
* gnu/packages/emacs-xyz.scm (emacs-dired-toggle-sudo): New variable.
* gnu/packages/patches/emacs-dired-toggle-sudo-emacs-26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 16:02:05 +02:00
Brian Leung 1a24d8b347
gnu: Add emacs-helm-org-rifle. 
* gnu/packages/emacs-xyz.scm (emacs-helm-org-rifle): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 15:47:00 +02:00
Brian Leung 1239146613
gnu: emacs-magit-todos: Update to 1.3. 
* gnu/packages/emacs-xyz.scm (emacs-magit-todos): Update to 1.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 15:45:54 +02:00
Brian Leung 0074b1e96c
gnu: Add emacs-scroll-on-drag. 
* gnu/packages/emacs-xyz.scm (emacs-scroll-on-drag): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 15:45:24 +02:00
Brian Leung 91b351de53
gnu: Add emacs-evil-traces. 
* gnu/packages/emacs-xyz.scm (emacs-evil-traces): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 15:43:05 +02:00
Brian Leung 7fb91e4f36
gnu: emacs-helm: Update to 3.3. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 15:40:37 +02:00
Jonathan Frederickson 213315d485
gnu: Add libhandy. 
* gnu/packages/gnome.scm (libhandy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-08-05 14:06:11 +02:00
Nicolas Goaziou b705b1388f
gnu: emacs-org-contrib: Update to 20190805. 
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20190805.
 2019-08-05 13:07:56 +02:00
Nicolas Goaziou dedafb9ccf
gnu: emacs-org: Update to 9.2.5. 
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.5.
 2019-08-05 13:03:17 +02:00
Brian Leung 71804546b1
gnu: python-scikit-learn: Make gzip timestamps writable. 
* gnu/packages/machine-learning.scm (python-scikit-learn)
[arguments]: Add custom phase to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-08-05 10:23:02 +03:00
Brian Leung d9340de903
gnu: khmer: Make gzip timestamps writable. 
* gnu/packages/bioinformatics.scm (khmer)[arguments]: Add custom phase
to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-08-05 10:22:20 +03:00
Rutger Helling 3f14c9135b
gnu: mesa: Enable Intel 32-bit Vulkan drivers. 
* gnu/packages/gl.scm (mesa)[arguments]: Also build Vulkan drivers for Intel
on i686-linux.
 2019-08-05 08:25:04 +02:00
Mark H Weaver 5ee4d11ff4
gnu: linux-libre: Update to 5.2.6. 
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.6.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
 2019-08-04 22:02:02 -04:00
Mark H Weaver b4478eb2e3
gnu: linux-libre@4.19: Update to 4.19.64. 
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.64.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
 2019-08-04 22:01:59 -04:00
Mark H Weaver cf1941712f
gnu: linux-libre@4.14: Update to 4.14.136. 
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.136.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
 2019-08-04 22:01:57 -04:00
Mark H Weaver 8079493c6c
gnu: linux-libre@4.9: Update to 4.9.187. 
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.187.
(linux-libre-4.9-pristine-source)[hash]: Update hash.
 2019-08-04 22:01:55 -04:00
Mark H Weaver 71f9016a4f
gnu: linux-libre@4.4: Update to 4.4.187. 
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.187.
(linux-libre-4.4-pristine-source)[hash]: Update hash.
 2019-08-04 22:01:52 -04:00
Mark H Weaver 95580bda05
gnu: nss: Update to 3.45 [security fixes]. 
Includes fixes for CVE-2019-11719, CVE-2019-11727, and CVE-2019-11729.

* gnu/packages/nss.scm (nss): Update to 3.45.
 2019-08-04 21:59:38 -04:00
Tobias Geerinckx-Rice 35600cd9a0
gnu: docker-compose: Remove inputs for old Python versions. 
* gnu/packages/docker.scm (docker-compose)[inputs]:
Remove python2-backport-ssl-match-hostname and python-ipaddress.
 2019-08-05 01:06:58 +02:00
Tobias Geerinckx-Rice d12578f2e2
gnu: python-docker-py: Propagate dependencies. 
* gnu/packages/docker.scm (python-docker-py)[inputs]:
Move python-docker-pycreds and python-paramiko from here…
[propagated-inputs]: …to here.
(docker-compose)[inputs]: Remove them.
 2019-08-05 01:06:58 +02:00
Tobias Geerinckx-Rice e643d90f0f
gnu: docker-compose: Remove Windows-specific input. 
* gnu/packages/docker.scm (docker-compose)[inputs]:
Remove python-colorama.
 2019-08-05 01:06:57 +02:00
Marius Bakke 5b689de58d
gnu: x265: Update to 3.1.2. 
* gnu/packages/video.scm (x265): Update to 3.1.2.
 2019-08-05 00:17:09 +02:00
Marius Bakke 621ce95cfe
gnu: x265: Update source URI. 
* gnu/packages/video.scm (x265)[source](uri): Add the canonical upstream at
<https://bitbucket.org/multicoreware/x265>.
 2019-08-05 00:17:09 +02:00
Marius Bakke 15b5963300
gnu: i3-wm: Update to 4.17. 
* gnu/packages/wm.scm (i3-wm): Update to 4.17.
 2019-08-04 17:39:04 +02:00
Marius Bakke cb96d239e6
gnu: i3status: Update to 2.13. 
* gnu/packages/wm.scm (i3status): Update to 2.13.
[arguments]: Remove #:make-flags and #:phases.  Add #:out-of-source?.
[native-inputs]: Add DOCBOOK-XSL, LIBXML2 and XMLTO.
 2019-08-04 17:38:13 +02:00
Marius Bakke 4f868257f3
gnu: samba: Update to 4.10.6. 
* gnu/packages/samba.scm (samba): Update to 4.10.6.
 2019-08-04 16:22:35 +02:00
Marius Bakke 2e2db09280
gnu: strace: Update to 5.2. 
* gnu/packages/linux.scm (strace): Update to 5.2.
 2019-08-04 16:22:20 +02:00
Marius Bakke 16feaeefc9
gnu: libevent: Update to 2.1.11. 
* gnu/packages/libevent.scm (libevent): Update to 2.1.11.
 2019-08-04 16:22:01 +02:00
Marius Bakke febbe43155
gnu: exiv2: Update to 0.27.2. 
* gnu/packages/image.scm (exiv2): Update to 0.27.2.
 2019-08-04 16:21:43 +02:00
Marius Bakke 9728def2e9
gnu: enchant: Update to 2.2.5. 
* gnu/packages/enchant.scm (enchant): Update to 2.2.5.
 2019-08-04 16:21:26 +02:00
Marius Bakke 6bf53ad58d
gnu: python-mako: Update to 1.1.0. 
* gnu/packages/python-xyz.scm (python-mako): Update to 1.1.0.
[arguments]: New field.
[native-inputs]: Remove PYTHON-NOSE.
 2019-08-04 14:02:48 +02:00
Marius Bakke 4668464f29
gnu: flac: Update to 1.3.3. 
* gnu/packages/xiph.scm (flac): Update to 1.3.3.
[source](patches): Remove.
* gnu/packages/patches/flac-CVE-2017-6888.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2019-08-04 13:57:53 +02:00
Marius Bakke 3082280cf9
gnu: libpciaccess: Update to 0.16. 
* gnu/packages/xorg.scm (libpciaccess): Update to 0.16.
 2019-08-04 13:49:57 +02:00
Marius Bakke 8ed97b6ea1
gnu: nss, nss-certs: Update to 3.45. 
* gnu/packages/certs.scm (nss-certs): Update to 3.45.
* gnu/packages/nss.scm (nss): Likewise.
 2019-08-04 13:49:57 +02:00
Marius Bakke cb16a9fba9
gnu: python-packaging: Update to 19.1. 
* gnu/packages/python-xyz.scm (python-packaging): Update to 19.1.
 2019-08-04 13:49:56 +02:00
Marius Bakke ec227df31a
gnu: perl-cgi: Update to 4.44. 
* gnu/packages/web.scm (perl-cgi): Update to 4.44.
 2019-08-04 13:49:56 +02:00
Marius Bakke ff292a77a9
gnu: perl-http-message: Update to 6.18. 
* gnu/packages/web.scm (perl-http-message): Update to 6.18.
 2019-08-04 13:49:56 +02:00
Marius Bakke 81e74dc80b
gnu: libva: Update to 2.5.0. 
* gnu/packages/video.scm (libva): Update to 2.5.0.
 2019-08-04 13:49:56 +02:00
Marius Bakke 1648530f4a
gnu: gtk+: Update to 3.24.10. 
* gnu/packages/gtk.scm (gtk+): Update to 3.24.10.
 2019-08-04 13:49:56 +02:00
Marius Bakke 140716a5c9
gnu: cups-filters: Update to 1.25.1. 
* gnu/packages/cups.scm (cups-filters): Update to 1.25.1.
 2019-08-04 13:49:56 +02:00
Marius Bakke 6d9de48d15
gnu: subversion: Update to 1.10.6 [fixes CVE-2018-11782, CVE-2019-0203]. 
* gnu/packages/version-control.scm (subversion): Update to 1.10.6.
 2019-08-04 13:49:56 +02:00
Marius Bakke cc3c5fc5e1
gnu: mariadb: Update to 10.1.41 [security fixes]. 
This fixes CVE-2019-2805, CVE-2019-2740, CVE-2019-2739, and CVE-2019-2737.

* gnu/packages/databases.scm (mariadb): Update to 10.1.41.
[source](uri): Update download URL.
 2019-08-04 13:49:56 +02:00
Marius Bakke 4661fa76c7
gnu: python-mako: Update to 1.0.14. 
* gnu/packages/python-xyz.scm (python-mako): Update to 1.0.14.
 2019-08-04 13:49:55 +02:00
Marius Bakke 756a980953
gnu: python-cython: Update to 0.29.13. 
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.13.
 2019-08-04 13:49:55 +02:00
Marius Bakke c0e40f4fd2
gnu: ImageMagick: Update to 6.9.10-58. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-58.
 2019-08-04 13:49:55 +02:00
Marius Bakke 7aad68f6d9
gnu: libwebp: Update to 1.0.3. 
* gnu/packages/image.scm (libwebp): Update to 1.0.3.
 2019-08-04 13:49:55 +02:00
Marius Bakke f184893af0
gnu: MariaDB: Disable the TokuDB plugin. 
Fixes <https://bugs.gnu.org/35521>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/databases.scm (mariadb)[arguments]: Pass "-DTOKUDB_OK" in
<#:configure-flags>.  Enable the "innodb_fts.crash_recovery" test, which
likely failed because of the high I/O load induced by TokuDB.
[inputs]: Remove SNAPPY.

(cherry picked from commit bba7a77ed9)
 2019-08-04 13:49:55 +02:00
Marius Bakke 275cce3d87
gnu: python-cython: Speed up test suite. 
* gnu/packages/python-xyz.scm (python-cython)[arguments]: In the CHECK phase,
disable compiler optimizations and enable (some) parallel tests.

(cherry picked from commit e9194eb048)
 2019-08-04 13:49:55 +02:00
Marius Bakke 18090a9735
gnu: perl-try-tiny: Update to 0.30. 
* gnu/packages/perl.scm (perl-try-tiny): Update to 0.30.
 2019-08-04 13:49:55 +02:00
Marius Bakke 1c7d7f3f65
gnu: double-conversion: Update to 3.1.5. 
* gnu/packages/maths.scm (double-conversion): Update to 3.1.5.
 2019-08-04 13:49:54 +02:00
Marius Bakke a33925d122
gnu: Remove pcre2/fixed. 
* gnu/packages/pcre.scm (pcre2/fixed): Remove variable.
(pcre2)[replacement]: Remove.
[source](patches): New field.
* gnu/packages/php.scm (php)[inputs]: Change PCRE2/FIXED to PCRE2.
 2019-08-04 13:49:45 +02:00
Marius Bakke f35d313265
Merge branch 'master' into staging 2019-08-04 13:41:27 +02:00
Marius Bakke e920037793
gnu: docker-cli: Print a usable version string. 
* gnu/packages/docker.scm (docker-cli)[arguments]<#:phases>: Set the VERSION
variable before building the package.
 2019-08-04 13:33:42 +02:00
Marius Bakke 7f2e852267
gnu: ungoogled-chromium: Update to 76.0.3809.87-0.6ea9390. 
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 76.
(%chromium-version): Set to 76.0.3809.87.
(%ungoogled-revision): Set to 6ea939002bae43a27910e03569d43519d07842e7.
(%debian-revision): Set to debian/76.0.3809.87-2.
(%chromium-origin, %ungoogled-origin, %debian-origin): Update hashes.
(gentoo-patch, gentoo-patches): New procedures.
(%auxiliary-patches): New variable.
(ungoogled-chromium-source): Ignore Ungoogleds bundled Debian patches, as well
as some of Debians build fixes.  Apply %AUXILIARY-PATCHES.
(ungoogled-chromium)[arguments]: Adjust unbundling substitutions.  Do not set
Blink symbol level.
 2019-08-04 13:33:42 +02:00
Marius Bakke f339cb188a
gnu: re2: Update to 2019-08-01. 
* gnu/packages/regex.scm (re2): Update to 2019-08-01.
 2019-08-04 13:33:42 +02:00
Tobias Geerinckx-Rice ded545d562
gnu: mpfi: Use @acronym{} in Texinfo. 
* gnu/packages/multiprecision.scm (mpfi)[description]: Substitute
@acronym{} for @dfn{}.
 2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice aaf80ba781
gnu: mpc: Use @acronym{} in Texinfo. 
* gnu/packages/multiprecision.scm (mpc)[description]: Substitute
@acronym{} for @dfn{}.
 2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 932b607293
gnu: mpfr: Use @acronym{} in Texinfo. 
* gnu/packages/multiprecision.scm (mpfr)[description]: Substitute
@acronym{} for @dfn{}.
 2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 245fae9077
gnu: gmp: Use @acronym{} in Texinfo. 
* gnu/packages/multiprecision.scm (gmp)[description]: Substitute
@acronym{} for @dfn{}.
 2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice f8f2b048b9
gnu: mtd-utils: Support cryptography. 
* gnu/packages/linux.scm (mtd-utils)[inputs]: Add openssl.
 2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 9ea820a5bf
gnu: mtd-utils: Update to 2.1.1. 
* gnu/packages/linux.scm (mtd-utils): Update to 2.1.1.
[inputs]: Add zstd:lib.
 2019-08-03 23:26:39 +02:00
Tobias Geerinckx-Rice b5e912a88c
gnu: man-pages: Update to 5.02. 
* gnu/packages/man.scm (man-pages): Update to 5.02.
 2019-08-03 17:41:29 +02:00
Alex Vong 144cb83a71
gnu: youtube-dl: Update to 2019.08.02. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.08.02.
 2019-08-03 21:54:08 +08:00
David Thompson 2d0e802f1a
gnu: guile-next: Update to 2.9.3. 
* gnu/packages/guile.scm (guile-next): Update to 2.9.3.
 2019-08-03 08:14:20 -04:00
Rutger Helling 036feaf9cb
gnu: wine64-staging: Adapt patch script. 
* gnu/packages/wine.scm (wine64-staging)[arguments]: Don't exclude certain
patches.
 2019-08-03 10:50:58 +02:00
Rutger Helling 09fd82ce8c
gnu: wine-staging: Update to 4.13. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.13.
* gnu/packages/wine.scm (wine-staging): Update to 4.13.
 2019-08-03 10:33:23 +02:00
Tobias Geerinckx-Rice 82ebb785f1
gnu: you-get: Update to 0.4.1328. 
* gnu/packages/video.scm (you-get): Update to 0.4.1328.
 2019-08-03 01:13:47 +02:00
Tobias Geerinckx-Rice 095c09c773
gnu: krita: Update to 4.2.5. 
* gnu/packages/kde.scm (krita): Update to 4.2.5.
 2019-08-03 01:13:47 +02:00
Tobias Geerinckx-Rice ad9fd1ba2c
gnu: texmacs: Update to 1.99.11. 
* gnu/packages/text-editors.scm (texmacs): Update to 1.99.11.
 2019-08-03 01:13:47 +02:00
Pierre Neidhardt 000faac0a2
gnu: sbcl-trivia: Fix .asd loading. 
* gnu/packages/lisp.scm (sbcl-trivia): Do it.
 2019-08-02 17:45:37 +02:00
Pierre Neidhardt 6ba457cc1c
gnu: Add sbcl-cl-str. 
* gnu/packages/lisp.scm (sbcl-cl-str): New variable.
 2019-08-02 13:11:13 +02:00
Tobias Geerinckx-Rice 7c13793dbc
Revert "gnu: fontforge: Update to 20190801." 
This is core-updates material.
This reverts commit 4bb1582c8a.
 2019-08-02 08:42:14 +02:00
Tobias Geerinckx-Rice 3ab8c2242d
gnu: fontforge: Use top-level home page. 
* gnu/packages/fontutils.scm (fontforge)[home-page]: Remove language code.
 2019-08-02 08:00:07 +02:00
Tobias Geerinckx-Rice 4bb1582c8a
gnu: fontforge: Update to 20190801. 
* gnu/packages/fontutils.scm (fontforge): Update to 20190801.
 2019-08-02 08:00:07 +02:00
Tobias Geerinckx-Rice a17fe3f01a
gnu: Add missing pcre2-fix-jit_match-crash.patch. 
* gnu/packages/patches/pcre2-fix-jit_match-crash.patch: Really new file.
 2019-08-02 02:01:17 +02:00
Tobias Geerinckx-Rice 61919f0981
gnu: php: Update to 7.3.8. 
* gnu/packages/php.scm (php): Update to 7.3.8.
[inputs]: Use pcre2/fixed.
 2019-08-02 01:49:53 +02:00
Tobias Geerinckx-Rice 951fd8572a
gnu: pcre@2: Fix run-time crash [security fix]. 
* gnu/packages/pcre.scm (pcre2)[replacement]: New field.
(pcre2/fixed): New public variable.
* packages/patches/pcre2-fix-jit_match-crash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-08-02 01:49:47 +02:00
Tobias Geerinckx-Rice 9b76aa1031
gnu: php: Don't use NAME in source URI. 
* gnu/packages/php.scm (php)[source]: Hard-code NAME.
 2019-08-02 01:49:24 +02:00