Commit Graph

26451 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice ce0be1bcf4
gnu: perl-lingua-en-inflect: Update to 1.903.
* gnu/packages/language.scm (perl-lingua-en-inflect): Update to 1.903
2017-12-16 02:57:46 +01:00
Tobias Geerinckx-Rice 7e8aac188f
gnu: perl-crypt-openssl-bignum: Update to 0.09.
* gnu/packages/tls.scm (perl-crypt-openssl-bignum): Update to 0.09
2017-12-16 02:57:46 +01:00
Tobias Geerinckx-Rice 794251674e
gnu: perl-compress-raw-zlib: Update to 2.076.
* gnu/packages/compression.scm (perl-compress-raw-zlib): Update to 2.076
2017-12-16 02:57:46 +01:00
Tobias Geerinckx-Rice afe98094dc
gnu: gflags: Update to 2.2.1.
* gnu/packages/popt.scm (gflags): Update to 2.2.1
2017-12-16 02:57:31 +01:00
Mark H Weaver b43ef298fe
gnu: linux-libre: Update to 4.14.6.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.14.6.
(%linux-libre-hash): Update hash.
2017-12-15 20:15:30 -05:00
Mark H Weaver d14d1f1d04
gnu: linux-libre@4.9: Update to 4.9.69.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.69.
2017-12-15 20:14:09 -05:00
Mark H Weaver 1018444608
gnu: linux-libre@4.1: Update to 4.1.48.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.48.
2017-12-15 20:13:19 -05:00
Ludovic Courtès 86c979b794
gnu: hplip: Update to 3.7.11.
* gnu/packages/cups.scm (hplip): Update to 3.7.11.
[source]: Add 'snippet'.
[arguments]: In 'fix-hard-coded-file-names' phase, adjust hack for
$(hplip_statedir) creation.
[inputs]: Add ZLIB.
[native-inputs]: Add PERL.
2017-12-15 23:32:02 +01:00
Ludovic Courtès 5bd3a84109
gnu: guile-gdbm-ffi: Default to Guile 2.2.
* gnu/packages/guile.scm (guile-gdbm-ffi)[inputs]: Switch to GUILE-2.2.
(guile2.0-gdbm-ffi, guile2.2-gdbm-ffi): New variables.
2017-12-15 23:32:02 +01:00
Ricardo Wurmus 42cdcdff19
etc: Add snippets.
* etc/snippets/scheme-mode/guix-cvs-reference,
etc/snippets/scheme-mode/guix-git-reference,
etc/snippets/scheme-mode/guix-hg-reference,
etc/snippets/scheme-mode/guix-origin,
etc/snippets/scheme-mode/guix-package,
etc/snippets/scheme-mode/guix-svn-reference,
etc/snippets/text-mode/guix-commit-message-add-package,
etc/snippets/text-mode/guix-commit-message-update-package: New files.
* doc/contributing.texi (The Perfect Setup): Document snippets.
2017-12-15 23:15:32 +01:00
Eric Bavier 7683bf1183
gnu: texlive-bin: Disable tests on aarch64.
* gnu/packages/tex.scm (texlive-bin)[arguments]: Disable tests on aarch64.
2017-12-15 07:32:44 -06:00
Eric Bavier 6ad0c92df5
gnu: ceres-solver: Update to 1.13.0.
* gnu/packages/maths.scm (ceres-solver): Update to 1.13.0.
2017-12-15 07:32:43 -06:00
Eric Bavier 1137d85b08
gnu: eigen: Update to 3.3.4.
* gnu/packages/patches/eigen-arm-neon-fixes.patch: New patch.
* gnu/packages/algebra.scm (eigen): Update to 3.3.4.
[source]: Use patch.  Disable svd-preallocation test for BDCSVD.
[arguments]: Set "EIGEN_SEED" environment variable in check phase.
* gnu/local.mk (dist_patch_DATA): Add patch.
2017-12-15 07:32:36 -06:00
Tobias Geerinckx-Rice 574b1d0262
gnu: python-pyicu: Set python2-variant.
This follows up on commit d65854bdda, which
did not fix test failures for dependents using package-with-python2.

* gnu/packages/python.scm (python-pyicu)[properties]: Set python2-variant.
2017-12-15 16:44:27 +01:00
Tobias Geerinckx-Rice 6bc862c100
gnu: r-foreach: Update to 1.4.4.
* gnu/packages/statistics.scm (r-foreach): Update to 1.4.4
2017-12-15 16:44:26 +01:00
Tobias Geerinckx-Rice 2c7f6ce15d
gnu: text-editors: Fix nckx's copyright statement.
* gnu/packages/text-editors.scm: Fix Tobias Geerinckx-Rice's copyright
statement.
2017-12-15 16:44:26 +01:00
Tobias Geerinckx-Rice fd4f26ee20
gnu: ghc-reflection: Update to 2.1.2.
* gnu/packages/haskell.scm (ghc-reflection): Update to 2.1.2.
2017-12-15 16:44:25 +01:00
Rutger Helling fb9472a327
gnu: Add lookingglass.
* gnu/packages/virtualization.scm (lookingglass): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-15 16:39:58 +01:00
Mathieu Othacehe ceb3952764
system: Add BeagleBone Black installer.
* gnu/bootloader/u-boot.scm (u-boot-beaglebone-black-bootloader): New exported
  bootloader.
* gnu/system/install.scm (beaglebone-black-installation-os): New exported variable.
2017-12-15 12:15:15 +01:00
Mathieu Othacehe 5a72ddf176
scripts: system: Add --expression option.
* guix/scripts/system.scm (show-help): Add expression option.
(%options): Ditto.
(guix-system): Allow commands taking a file as an argument to use an
expression instead.
(process-action): Read operating-system from expression or file.
* doc/guix.texi (Invoking guix system): Introduce the expression option.
2017-12-15 12:15:15 +01:00
Tobias Geerinckx-Rice d65854bdda
gnu: python2-pyicu: Disable failing test.
* gnu/packages/python.scm (python2-pyicu)[arguments]: Add
‘delete-failing-test’ phase.
2017-12-15 12:12:22 +01:00
Tobias Geerinckx-Rice 852ba10a54
gnu: vis: Update to 0.4.
* gnu/packages/text-editors.scm (vis): Update to 0.4.
[arguments]: Document the #:tests situation and the (broken) #:test-target.
[inputs]: Add tre.
2017-12-15 12:12:11 +01:00
Pierre Langlois 5830168207
gnu: Add Easytag.
* gnu/packages/music.scm (easytag): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-15 11:53:21 +01:00
Ludovic Courtès 3e0a42973b
progress: Rename 'erase-in-line' to 'erase-current-line'.
Suggested by Danny Milosavljevic <dannym@scratchpost.org>.

* guix/progress.scm (erase-in-line): Rename to...
(erase-current-line): ... this.  Adjust callers.
2017-12-15 11:53:21 +01:00
Mathieu Othacehe e224820386
bootloader: Factorize write-file-on-device.
* gnu/bootloader/extlinux.scm (install-extlinux): Factorize bootloader
writing in a new procedure write-file-on-device defined in (gnu build
bootloader).
* gnu/build/bootloader.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new file.
* gnu/system/vm.scm (qemu-img): Adapt to import and use (gnu build bootloader)
module during derivation building.
* gnu/scripts/system.scm (bootloader-installer-derivation): Ditto.
2017-12-15 11:52:38 +01:00
Mathieu Othacehe acf54bca22
vm: Adapt qemu command to ARM.
* gnu/build/vm.scm (load-in-linux-vm): New argument #:target-arm32.
Use it to adapt command for qemu-system-arm.  This implies to choose a
machine ("virt"), use the correct console port "ttyAMA0", disable KVM use
that is buggy on some ARM boards (Odroid XU4 for example) and use user mode
network stack instead of NIC. Gather all those options in a new variable
"arch-specific-flags".
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Pass
to load-in-linux-vm "#:target-arm32?" argument.
2017-12-15 11:44:29 +01:00
Oleg Pykhalov dfb403b053
doc: Fix typo.
* doc/guix.texi (DNS Services): Fix knot-configuration.
2017-12-15 12:47:28 +03:00
Ben Woodcroft 86637f18be
gnu: ruby: Replace with ruby-2.4.3 [fixes CVE-2017-17405].
* gnu/packages/ruby.scm (ruby-2.4.3): New variable.
(ruby)[replacement]: New field.
2017-12-15 13:56:51 +10:00
Ben Woodcroft 6098a386a9
gnu: bedtools: Update to 2.27.1.
* gnu/packages/ruby.scm (bedtools): Update to 2.27.1.
2017-12-15 13:56:51 +10:00
Ben Woodcroft 263c56d293
gnu: ruby-2.2: Update to 2.2.9 [fixes CVE-2017-17405].
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.9.
2017-12-15 13:56:51 +10:00
Ben Woodcroft 2713e399ee
gnu: ruby-2.3: Update to 2.3.6 [fixes CVE-2017-17405].
* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.6.
2017-12-15 13:56:50 +10:00
Ricardo Wurmus 86383d6746
gnu: yoshimi: Update to 1.5.5.
* gnu/packages/music.scm (yoshimi): Update to 1.5.5.
2017-12-15 00:00:34 +01:00
Ricardo Wurmus 1bc147d609
guix: ant-build-system: Do not compress jars.
Fixes <https://bugs.gnu.org/29700>.

* guix/build/ant-build-system.scm (strip-jar-timestamps): Do not compress jar
when repacking.
2017-12-15 00:00:34 +01:00
ng0 e536b1d308
gnu: s-shell: Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.
* gnu/packages/shells.scm (s-shell): Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.
[version]: Use 'git-version'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
Rutger Helling a0ec2d256d
gnu: xpra: Update to 2.2.
* gnu/packages/xorg.scm (xpra): Update to 2.2.
[inputs]: Add python2-netifaces and python2-pyopengl-accelerate.  Fix
position of commas.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
Rutger Helling 97c26793d9
gnu: Add python2-pyopengl-accelerate.
* gnu/packages/python.scm (python2-pyopengl-accelerate): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14 18:26:25 +01:00
Ben Woodcroft 8a6cd65a2a
gnu: python-scikit-learn: Patch test non-determinism.
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch:
New file.
* gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-12-14 22:50:19 +10:00
Ben Woodcroft 4e0b3583ea
gnu: diamond: Update to 0.9.14.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.14.
2017-12-14 22:50:10 +10:00
Andy Wingo aa29f8fb02
gnu: gucharmap: Use glib-or-gtk-build-system.
* gnu/packages/gnome.scm (gucharmap): Use glib-or-gtk-build-system.
2017-12-14 11:09:26 +01:00
Leo Famulari 35e86e3605
gnu: Erlang: Update to 20.1.7 [fixes CVE-2017-1000385].
* gnu/packages/erlang.scm (erlang): Update to 20.1.7
(native-inputs): Use version-major+minor in the URI of erlang-manpages.
2017-12-13 19:51:00 -05:00
Tobias Geerinckx-Rice 4a699769fd
gnu: youtube-dl: Update to 2017.12.14.
* gnu/packages/video.scm (youtube-dl): Update to 2017.12.14.
2017-12-14 00:18:16 +01:00
Tobias Geerinckx-Rice a135b3ddfe
gnu: r-caret: Update to 6.0-78.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-78
2017-12-14 00:18:16 +01:00
Tobias Geerinckx-Rice 5ac4bd9c0a
gnu: r-domc: Update to 1.3.5.
* gnu/packages/statistics.scm (r-domc): Update to 1.3.5
2017-12-14 00:18:15 +01:00
Tobias Geerinckx-Rice a2460e0f6b
gnu: perl-text-bibtex: Update to 0.85.
* gnu/packages/tex.scm (perl-text-bibtex): Update to 0.85
2017-12-14 00:18:15 +01:00
Tobias Geerinckx-Rice 1d1f1b3a6e
gnu: perl-test-requires: Update to 0.10.
* gnu/packages/perl-check.scm (perl-test-requires): Update to 0.10
2017-12-14 00:18:14 +01:00
Tobias Geerinckx-Rice 9210fdf8b7
gnu: perl-test-pod: Update to 1.51.
* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.51
[source]: Update URI.
2017-12-14 00:17:39 +01:00
Tobias Geerinckx-Rice ab998d5e93
gnu: perl-test-mocktime: Update to 0.15.
* gnu/packages/perl-check.scm (perl-test-mocktime): Update to 0.15
[propagated-inputs]: Add perl-time-piece.
2017-12-14 00:05:15 +01:00
Tobias Geerinckx-Rice da43edbe0f
gnu: Add perl-time-piece.
* gnu/packages/perl.scm (perl-time-piece): New public variable.
2017-12-14 00:05:15 +01:00
Ludovic Courtès e2e6e9ebf0
hydra: Pre-load the compiler.
Starting from Guile 2.2.3, '%fresh-auto-compile' does what it says and
would auto-compile everything, including the compiler (see
<https://bugs.gnu.org/29226>).

* build-aux/hydra/gnu-system.scm: Call 'compile'.
2017-12-13 23:11:54 +01:00
Ludovic Courtès 34797d8afc
hydra: Invalidate derivation caches after each architecture evaluation.
This reduces max RSS from 1.3G to 1.0G.

* guix/derivations.scm (invalidate-derivation-caches!): New procedure.
* build-aux/hydra/gnu-system.scm (hydra-jobs): Use it.  Add 'format'
call.
2017-12-13 23:11:53 +01:00