Commit Graph

32922 Commits (d5fa25a5a0b2b419d96edb1a8657d1e386554459)

Author SHA1 Message Date
Danny Milosavljevic 8cd958608c
gnu: docker: Disable tests requiring elevated permissions.
* gnu/packages/docker.scm (docker)[arguments]<#:phases>[delete-failing-tests]:
Disable tests requiring elevated permissions.
2019-01-10 04:46:29 +01:00
Danny Milosavljevic 8b487bf84f
gnu: containerd: Fix more paths.
* gnu/packages/docker.scm (containerd)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:34:57 +01:00
Danny Milosavljevic 58adcaa19f
gnu: docker: Fix more paths.
* gnu/packages/docker.scm (docker)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:33:47 +01:00
Danny Milosavljevic f0bfd0fc21
services: docker: Specify log file for containerd.
* gnu/services/docker.scm (containerd-shepherd-service): Specify log file
for containerd.
2019-01-10 03:54:28 +01:00
Danny Milosavljevic 7d8a4eeacc
tests: Add Docker system test.
* gnu/tests/docker.scm: New file.
2019-01-10 03:44:20 +01:00
Danny Milosavljevic 65a7e35cb5
gnu: docker: Substitute LookPath of literals generally.
* gnu/packages/docker.scm (docker)[arguments]<#:phases>[patch-paths]:
Substitute LookPath of literals generally.
2019-01-10 03:12:32 +01:00
Danny Milosavljevic e9b316453e
gnu: Add docker-cli.
* gnu/packages/docker.scm (docker-cli): New variable.
2019-01-10 03:01:12 +01:00
Danny Milosavljevic 8af4c335e3
services: Add docker.
* gnu/services/docker.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document the service.
2019-01-10 03:00:55 +01:00
Danny Milosavljevic f87ea24a82
gnu: Add docker.
* gnu/packages/docker.scm (docker): New variable.
* gnu/packages/patches/docker-engine-test-noinstall.patch: New file.
* gnu/packages/patches/docker-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-01-10 02:49:14 +01:00
Leo Famulari fc51c28ae8
gnu: Blender: Update to a beta release of 2.80.
Fixes <https://bugs.gnu.org/33608> and <https://bugs.gnu.org/33882>.

* gnu/packages/graphics.scm (blender): Update to 2.80-beta-0.3c3d80e.
[source]: Fetch from the Git repository.
[inputs]: Use OpenJPEG 2. Add Numpy.
[arguments]: Specify the location of Numpy. Remove some configure flags that are
no longer used. Comment out the 'fix-broken-import' phase because the
file it patches doesn't exist in the Git sources.
[description]: Add a warning about the beta status.
2019-01-09 18:54:16 -05:00
Jelle Licht b96f0e6ff9
gnu: emacs-ghub: Update to 3.2.0.
* gnu/packages/emacs.scm (emacs-ghub): Update to 3.2.0.
[source]: Use 'git-fetch'.
[propagated-inputs]: Add emacs-dash, emacs-graphql,
emacs-let-alist, emacs-treepy.
2019-01-09 22:40:32 +01:00
Jelle Licht 9bc7dd62b4
gnu: emacs-magit-popup: Update to 2.12.5.
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.5.
2019-01-09 22:40:25 +01:00
Jelle Licht 8d59ef68cb
gnu: emacs-with-editor: Update to 2.8.0.
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.8.0.
[source]: Use 'git-fetch'.
2019-01-09 22:40:13 +01:00
Jelle Licht 5b07f06804
gnu: Add emacs-graphql.
* gnu/packages/emacs.scm (emacs-graphql): New variable.
2019-01-09 22:40:02 +01:00
Jelle Licht abb8dff054
gnu: Add emacs-treepy.
* gnu/packages/emacs.scm (emacs-treepy): New variable.
2019-01-09 22:38:22 +01:00
Jelle Licht 56c50c71b5
gnu: emacs-emacsql: Update to 3.0.0.
* gnu/packages/emacs.scm (emacs-emacsql): Update to 3.0.0.
[source]: Use 'git-fetch'.
[arguments]: Remove unnecessary fix.
2019-01-09 22:38:06 +01:00
Jelle Licht d4e915f9b5
gnu: emacs-closql: Update to 1.0.0.
* gnu/packages/emacs.scm (emacs-closql): Update to 1.0.0.
[source]: Use 'git-fetch'.
2019-01-09 22:37:52 +01:00
Leo Famulari 817e09c174
gnu: Django: Update to 1.11.18 [fixes CVE-2019-3498].
* gnu/packages/django.scm (python-django, python2-django): Update to 1.11.18.
2019-01-09 15:44:36 -05:00
Leo Famulari e82c98abe9
gnu: aria2: Fix CVE-2019-3500.
* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bittorrent.scm (aria2)[source]: Use it.
2019-01-09 15:38:19 -05:00
Leo Famulari 45ee3fde87
gnu: hashcat: Update to 5.1.0.
* gnu/packages/password-utils.scm (hashcat): Update to 5.1.0.
2019-01-09 14:05:20 -05:00
Danny Milosavljevic f73b7bf6e2
gnu: fasm: Update comments.
* gnu/packages/assembly.scm (fasm): Update comments.
2019-01-09 19:33:28 +01:00
Danny Milosavljevic cb95e79f14
gnu: fasm: Fix grammatical errors in description.
* gnu/packages/assembly.scm (fasm)[description]: Modify.
2019-01-09 19:33:27 +01:00
Danny Milosavljevic 1bde3d2cbf
gnu: Add dev86.
* gnu/packages/assembly.scm (dev86): New variable.
2019-01-09 19:33:27 +01:00
Efraim Flashner ab7aa06cac
gnu: python-pygit2: Update to 0.27.3.
* gnu/packages/python.scm (python-pygit2): Update to 0.27.3.
[arguments]: Add custom phase to compile with cffi support. Add custom
phase to not require specific versions of python-cffi.
[native-inputs]: Add python-pytest.
2019-01-09 20:25:50 +02:00
Ludovic Courtès 1b504b498a
gnu: libgit2: Update to 0.27.7.
* gnu/packages/version-control.scm (libgit2): Update to 0.27.7.
2019-01-09 18:47:57 +01:00
Tim Gesthuizen 037c3b0ea2
gnu: emacs-irony-mode: Remove propagated input
emacs-irony-mode finds its server binary because its a propagated input and is
in the path. We can substitute the variable `irony-server-install-prefix` to
not propagate the input and keep the binary isolated from the user.

* gnu/packages/emacs.scm (emacs-irony-mode):
[propagated-inputs] Remove propagated inputs
[inputs] Add emacs-irony-mode-server
[arguments] Add phase substituting the variable of the server path

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
Tim Gesthuizen ecf7e4ea43
gnu: emacs-ggtags: Don't require GNU Global in path
emacs-ggtags relies on the GNU Global tools (global and gtags) to be available
in the path. This way it will grab some random executable if it will find
executables at all.
This is fixed by setting the prefix to GNU Global in the store. This way
emacs-ggtags will use specific deterministic executables.

* gnu/packages/emacs.scm (emacs-ggtags):
[inputs]: Add GNU Global to the inputs
[arguments]: Add a phase for substituting the right path to the executables

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
Vasile Dumitrascu b2a5ef2e94
gnu: e2fsprogs: Update to 1.44.5.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.44.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
Vasile Dumitrascu 4287bd19c7
gnu: bind: Update to 9.12.3-P1.
* gnu/packages/dns.scm (bind): Update to 9.12.3-P1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
Brett Gilio 25a0ffbf27
gnu: emacs-md4rd: Update to c55512c.
* gnu/packages/emacs.scm (emacs-md4rd): Update to c55512c.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:56 +01:00
Ricardo Wurmus cba08f60a1
gnu: Add r-mcmc.
* gnu/packages/cran.scm (r-mcmc): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 39274ab4d9
gnu: Add r-parcor.
* gnu/packages/cran.scm (r-parcor): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 0af9616d91
gnu: Add r-huge.
* gnu/packages/cran.scm (r-huge): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 879a15203b
gnu: Add r-ppls.
* gnu/packages/cran.scm (r-ppls): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 17932a0f63
gnu: Add r-epi.
* gnu/packages/cran.scm (r-epi): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 728012dae8
gnu: Add r-etm.
* gnu/packages/cran.scm (r-etm): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 7aeec0cf37
gnu: Add r-cmprsk.
* gnu/packages/cran.scm (r-cmprsk): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus e3c0e3e360
gnu: Add r-protviz.
* gnu/packages/cran.scm (r-protviz): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus fe4e9f0349
gnu: Add r-rbamtools.
* gnu/packages/cran.scm (r-rbamtools): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus e50722c8e6
gnu: Add r-genenet.
* gnu/packages/cran.scm (r-genenet): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 6a5bfe09eb
gnu: Add r-longitudinal.
* gnu/packages/cran.scm (r-longitudinal): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 1ea708af8c
gnu: Add r-survivalroc.
* gnu/packages/cran.scm (r-survivalroc): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus afc0d8158b
gnu: Add r-bootstrap.
* gnu/packages/cran.scm (r-bootstrap): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 4fcbd7eaf3
gnu: Add r-rmeta.
* gnu/packages/cran.scm (r-rmeta): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus c2d6e866ac
gnu: Add r-drc.
* gnu/packages/cran.scm (r-drc): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 99c164a5c7
gnu: Add r-spatialextremes.
* gnu/packages/cran.scm (r-spatialextremes): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 32725458b7
gnu: Add r-fields.
* gnu/packages/cran.scm (r-fields): New variable.
2019-01-09 17:13:52 +01:00
Ricardo Wurmus 90104ecd66
gnu: Add r-spam.
* gnu/packages/cran.scm (r-spam): New variable.
2019-01-09 17:13:51 +01:00
Ricardo Wurmus f51dcc275e
gnu: Add r-dotcall64.
* gnu/packages/cran.scm (r-dotcall64): New variable.
2019-01-09 17:13:49 +01:00
Ricardo Wurmus 658b2b62cb
gnu: Add r-assertive.
* gnu/packages/cran.scm (r-assertive): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 39231abf4d
gnu: Add r-assertive-data.
* gnu/packages/cran.scm (r-assertive-data): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 39ef8e097b
gnu: Add r-assertive-data-uk.
* gnu/packages/cran.scm (r-assertive-data-uk): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 6d3702e5ce
gnu: Add r-assertive-data-us.
* gnu/packages/cran.scm (r-assertive-data-us): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 66d0a0a706
gnu: Add r-assertive-strings.
* gnu/packages/cran.scm (r-assertive-strings): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 29d9a2affb
gnu: Add r-assertive-datetimes.
* gnu/packages/cran.scm (r-assertive-datetimes): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 50ce8b1e2c
gnu: Add r-assertive-code.
* gnu/packages/cran.scm (r-assertive-code): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 1f0a761a14
gnu: Add r-assertive-files.
* gnu/packages/cran.scm (r-assertive-files): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 5e3bd35506
gnu: Add r-assertive-types.
* gnu/packages/cran.scm (r-assertive-types): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus dcafcfb4fd
gnu: Add r-assertive-reflection.
* gnu/packages/cran.scm (r-assertive-reflection): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus c358b5d418
gnu: Add r-assertive-models.
* gnu/packages/cran.scm (r-assertive-models): New variable.
2019-01-09 15:43:51 +01:00
Ricardo Wurmus 905aa46ae5
gnu: Add r-assertive-matrices.
* gnu/packages/cran.scm (r-assertive-matrices): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 2da2d2f605
gnu: Add r-assertive-sets.
* gnu/packages/cran.scm (r-assertive-sets): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus dac9c1f604
gnu: Add r-assertive-numbers.
* gnu/packages/cran.scm (r-assertive-numbers): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 4b2d17edaa
gnu: Add r-assertive-properties.
* gnu/packages/cran.scm (r-assertive-properties): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 8004bb2451
gnu: Add r-assertive-base.
* gnu/packages/cran.scm (r-assertive-base): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus a536c7c9ad
gnu: Add r-rmpfr.
* gnu/packages/cran.scm (r-rmpfr): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 1ab5160434
gnu: Add r-gmp.
* gnu/packages/cran.scm (r-gmp): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus dfd09f7bad
gnu: Add r-bigrquery.
* gnu/packages/cran.scm (r-bigrquery): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus ad6fea1690
gnu: Add r-ontologyindex.
* gnu/packages/cran.scm (r-ontologyindex): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 9170eb7f1f
gnu: Add r-rapidjsonr.
* gnu/packages/cran.scm (r-rapidjsonr): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus e7176ac5bd
gnu: Add r-pixmap.
* gnu/packages/cran.scm (r-pixmap): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 895efece37
gnu: Add r-strucchange.
* gnu/packages/cran.scm (r-strucchange): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus d28be7b76b
gnu: Add r-als.
* gnu/packages/cran.scm (r-als): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 9401f56b81
gnu: Add r-chemometricswithr.
* gnu/packages/cran.scm (r-chemometricswithr): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 25861356ed
gnu: Add r-iso.
* gnu/packages/cran.scm (r-iso): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 00436e2cac
gnu: Add r-nnls.
* gnu/packages/cran.scm (r-nnls): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus 2871b670a8
gnu: Add r-kohonen.
* gnu/packages/cran.scm (r-kohonen): New variable.
2019-01-09 15:43:50 +01:00
Ricardo Wurmus d0eb09a134
gnu: Add r-grimport.
* gnu/packages/cran.scm (r-grimport): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 7eec973e81
gnu: Add r-tractor-base.
* gnu/packages/cran.scm (r-tractor-base): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus b98662c53a
gnu: Add r-reportr.
* gnu/packages/cran.scm (r-reportr): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus cb03d6c6f3
gnu: Add r-ore.
* gnu/packages/cran.scm (r-ore): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 6e09f50613
gnu: Add r-shades.
* gnu/packages/cran.scm (r-shades): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus f79e63a571
gnu: Add r-rnifti.
* gnu/packages/cran.scm (r-rnifti): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus b2e777b27c
gnu: Add r-tfmpvalue.
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus adcd0cc87e
gnu: Add r-splitstackshape.
* gnu/packages/cran.scm (r-splitstackshape): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 5f0fbfc0ad
gnu: Add r-lassopv.
* gnu/packages/cran.scm (r-lassopv): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 3d62d98e69
gnu: Add r-flare.
* gnu/packages/cran.scm (r-flare): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 029425cbce
gnu: Add r-vbsr.
* gnu/packages/cran.scm (r-vbsr): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 5574cb812a
gnu: Add r-rpostgresql.
* gnu/packages/cran.scm (r-rpostgresql): New variable.
2019-01-09 15:43:49 +01:00
Ricardo Wurmus 3088b3fc5b
gnu: Add r-rspectra.
* gnu/packages/cran.scm (r-rspectra): New variable.
2019-01-09 15:43:45 +01:00
Ludovic Courtès 0991fd5336
build: Require Guile 2.2.
* configure.ac: Require Guile 2.2.
* README: Adjust accordingly.
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/package-management.scm (guile2.0-guix): Deprecate.
(guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
2019-01-09 14:47:53 +01:00
Eric Bavier fefcb122ac
gnu: dvdisaster: Run regression tests.
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Remove #:tests? argument.
Add 'check' phase.
2019-01-08 09:09:31 -06:00
Eric Bavier 98b0ec7fa6
gnu: dvdisaster: Install desktop file.
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add 'install-desktop phase.
2019-01-08 09:09:25 -06:00
Clément Lassieur 627e6d8c11
gnu: prosody: Update to 0.11.1.
* gnu/packages/messaging.scm (prosody): Update to 0.11.1.
[arguments]: Replace "Makefile" with "GNUmakefile".  Change "5.1" to "5.2".
Explain why there are no tests.
[inputs]: Replace lua-5.1, lua5.1-bitop, lua5.1-expat, lua5.1-socket,
lua5.1-filesystem, lua5.1-sec with lua-5.2, lua5.2-bitop, lua5.2-expat,
lua5.2-socket, lua5.2-filesystem, lua5.2-sec.
2019-01-08 15:23:36 +01:00
Clément Lassieur eb5b6c5777
gnu: Add lua5.2-sec.
* gnu/packages/lua.scm (lua5.2-sec): New variable.
(make-lua-sec): New procedure.
(lua5.1-sec, lua5.2-sec): Call it.
2019-01-08 15:23:36 +01:00
Clément Lassieur d994325747
gnu: Add lua-filesystem and lua5.2-filesystem.
* gnu/packages/lua.scm (lua-filesystem, lua5.2-filesystem): New variables.
(make-lua-filesystem): New procedure.
(lua-filesystem, lua5.1-filesystem, lua5.2-filesystem): Call it.
2019-01-08 15:23:36 +01:00
Clément Lassieur 253aab77c5
gnu: Add lua5.2-socket.
* gnu/packages/lua.scm (lua5.2-socket): New variable.
(make-lua-socket): New procedure.
(lua5.1-socket, lua5.2-socket): Call it.
2019-01-08 15:23:36 +01:00
Clément Lassieur 7c97a0631e
gnu: Add lua5.2-expat.
* gnu/packages/lua.scm (lua5.2-expat): New variable.
(make-lua-expat): New procedure.
(lua5.1-expat, lua5.2-expat): Call it.
2019-01-08 15:23:36 +01:00
Efraim Flashner 580f33e119
gnu: criu: Update to 3.11.
* gnu/packages/virtualization.scm (criu): Update to 3.11.
[arguments]: Add custom phase to patch python calls.
2019-01-08 12:29:42 +02:00
Efraim Flashner 49fe965d28
gnu: criu: Fix building on armhf-linux.
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm
version in the Makefile.
2019-01-08 12:29:40 +02:00
Clément Lassieur b509381089
gnu: gajim-omemo: Update to 2.6.26.
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.26.
2019-01-08 10:19:55 +01:00
Clément Lassieur 5cfec72f39
gnu: gajim: Update to 1.1.1.
* gnu/packages/messaging.scm (gajim): Update to 1.1.1.
[arguments]: Replace #:test-target with a 'check' phase.
2019-01-08 10:19:55 +01:00
Tobias Geerinckx-Rice eac5d425cd
gnu: tor: Update to 0.3.4.10.
* gnu/packages/tor.scm (tor): Update to 0.3.4.10.
2019-01-08 04:21:53 +01:00
Tobias Geerinckx-Rice be4f8391a4
gnu: privoxy: Update to 3.0.28.
* gnu/packages/tor.scm (privoxy): Update to 3.0.28.
2019-01-08 04:21:52 +01:00
Rutger Helling 3c85058c0e
gnu: libnet: Update to 1.2-rc3.
* gnu/packages/networking.scm (libnet): Update to 1.2-rc3.
[source]: Use git-fetch.
2019-01-07 22:07:01 +01:00
Julien Lepiller 8737666a99
gnu: ocaml-graph: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-graph)[properties]: Add upstream-name.
2019-01-07 22:05:47 +01:00
Julien Lepiller 33af92dd99
gnu: Move coq packages from ocaml to coq.
* gnu/packages/ocaml.scm (coq, proof-general, coq-flocq, coq-gappa, coq-mathcomp)
(coq-coquelicot, coq-bignums, coq-interval): Move from here...
* gnu/packages/coq.scm: ... to here.  New file.
2019-01-07 22:05:37 +01:00
Alex Kost 912f0541a3
gnu: emacs-guix: Update to 0.5.1.1.
* gnu/packages/emacs.scm (emacs-guix): Update to 0.5.1.1.
2019-01-07 22:52:46 +03:00
Danny Milosavljevic 40c7476af8
gnu: containerd: Update synopsis.
* gnu/packages/docker.scm (containerd)[synopsis]: Modify.
2019-01-07 19:13:04 +01:00
Danny Milosavljevic 54891e850a
gnu: containerd: Enable tests.
* gnu/packages/docker.scm (containerd)[arguments]: Remove #:tests?.
2019-01-07 19:12:14 +01:00
Ricardo Wurmus 1f1e338ad4
gnu: Add missing use-module clause.
This is a follow-up to 4e5b8f7215.

* gnu/packages/docker.scm: Add missing use-module clause.
2019-01-07 18:45:23 +01:00
Ricardo Wurmus d53b23176f
gnu: Add r-corpcor.
* gnu/packages/cran.scm (r-corpcor): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus e3bb076678
gnu: Add r-ddrtree.
* gnu/packages/cran.scm (r-ddrtree): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 9f33d76c33
gnu: Add r-qlcmatrix.
* gnu/packages/cran.scm (r-qlcmatrix): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 58bc8857fb
gnu: Add r-combinat.
* gnu/packages/cran.scm (r-combinat): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 13f5837b4c
gnu: Add r-densityclust.
* gnu/packages/cran.scm (r-densityclust): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus b614009e6a
gnu: Add r-sparsesvd.
* gnu/packages/cran.scm (r-sparsesvd): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus fbebccf7f6
gnu: Add r-docopt.
* gnu/packages/cran.scm (r-docopt): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 45b469a472
gnu: Add r-rvcheck.
* gnu/packages/cran.scm (r-rvcheck): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 61d7334906
gnu: Add r-tidytree.
* gnu/packages/cran.scm (r-tidytree): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus a6e4413d64
gnu: Add r-colorramps.
* gnu/packages/cran.scm (r-colorramps): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus e37935e457
gnu: Add r-wordcloud.
* gnu/packages/cran.scm (r-wordcloud): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus f3949fecb3
gnu: Add r-waveslim.
* gnu/packages/cran.scm (r-waveslim): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus db084d79ea
gnu: Add r-tiff.
* gnu/packages/cran.scm (r-tiff): New variable.
2019-01-07 18:44:04 +01:00
Ricardo Wurmus 44b0c5b5b1
gnu: Add r-fftwtools.
* gnu/packages/cran.scm (r-fftwtools): New variable.
2019-01-07 18:44:03 +01:00
Ricardo Wurmus 71601a5d92
gnu: Add r-softimpute.
* gnu/packages/cran.scm (r-softimpute): New variable.
2019-01-07 18:44:03 +01:00
Ricardo Wurmus 03a3ec5e18
gnu: Add r-adgoftest.
* gnu/packages/cran.scm (r-adgoftest): New variable.
2019-01-07 18:44:03 +01:00
Ricardo Wurmus a50abb3614
gnu: Add r-gsl.
* gnu/packages/cran.scm (r-gsl): New variable.
2019-01-07 18:44:03 +01:00
Ricardo Wurmus ced51a204e
gnu: Add r-stabledist.
* gnu/packages/cran.scm (r-stabledist): New variable.
2019-01-07 18:44:03 +01:00
Efraim Flashner dcd1aa2e64
gnu: perl-lingua-translit: Update to 0.28.
* gnu/packages/perl.scm (perl-lingua-translit): Update to 0.28.
2019-01-07 19:42:41 +02:00
Danny Milosavljevic 4e5b8f7215
gnu: Add containerd.
* gnu/packages/docker.scm (containerd): New variable.
2019-01-07 16:41:17 +01:00
Danny Milosavljevic 7f2d67c826
gnu: Add dummy linker for arm-elf.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for arm-elf.
2019-01-07 16:39:35 +01:00
Ricardo Wurmus 2a2760a08f
gnu: Move R packages from geo.scm to cran.scm.
* gnu/packages/geo.scm (r-maps, r-mapproj, r-rgooglemaps, r-geosphere,
r-ggmap): Move from here...
* gnu/packages/cran.scm: ...to here.
2019-01-07 15:55:06 +01:00
Ricardo Wurmus 576e74eee8
gnu: emacs-ess: Move to (gnu packages statistics).
* gnu/packages/emacs.scm (emacs-ess): Move from here...
* gnu/packages/statistics.scm (emacs-ess): ...to here.
2019-01-07 15:55:06 +01:00
Ricardo Wurmus 61f2587db9
gnu: python-rpy2: Move to (gnu packages statistics).
* gnu/packages/python.scm (python-rpy2): Move from here...
* gnu/packages/statistics.scm (python-rpy2): ...to here.
2019-01-07 15:55:06 +01:00
Ricardo Wurmus e0d3f4bf1a
gnu: Remove reference to (gnu packages statistics).
* gnu/packages/web.scm: Remove obsolete use-module clause.
2019-01-07 15:55:06 +01:00
Ricardo Wurmus d9bec9a87b
gnu: r-rmysql: Move from databases.scm to cran.scm
* gnu/packages/databases.scm (r-rmysql): Move from here...
* gnu/packages/cran.scm (r-rmysql): ...to here.
2019-01-07 15:55:06 +01:00
Jelle Licht 41a010875b
gnu: biber: Update to 2.12.
* gnu/packages/tex.scm (biber): Update to 2.12.
[source]: Use 'git-fetch'. Add patch.
[inputs]: Add perl-file-slurper. Remove perl-file-slurp.
* gnu/packages/patches/biber-fix-encoding-write.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-01-07 15:40:58 +01:00
Ricardo Wurmus 60a166c629
gnu: r-feather: Move from serialization.scm to cran.scm.
* gnu/packages/serialization.scm (r-feather): Move from here...
* gnu/packages/cran.scm (r-feather): ...to here.
2019-01-07 15:21:09 +01:00
Ludovic Courtès 67eebb19b7
gnu: Fix top-level circular references between emacs.scm and llvm.scm.
Previously, loading either of these two modules could fail somewhat
non-deterministically because each top-level was referencing a variable
defined by the other module's top-level.

* gnu/packages/emacs.scm (package-elisp-from-package): Move to...
* gnu/packages/llvm.scm (package-elisp-from-package): Here.  Keep
private.
2019-01-07 15:09:30 +01:00
Jelle Licht 37e461e6f4
gnu: perl-file-slurper: Update to 0.012.
* gnu/packages/perl.scm (perl-file-slurper): Update to 0.012.
[native-inputs]: Add perl-test-warnings.
2019-01-07 15:08:08 +01:00
Ricardo Wurmus 92ce188331
gnu: Move R packages from web.scm to cran.scm.
* gnu/packages/web.scm (r-httpuv, r-jsonlite, r-servr, r-htmltools,
r-htmlwidgets, r-htmltable, r-curl, r-hwriter, r-rjson, r-shiny,
r-shinydashboard, r-shinyfiles, r-crosstalk, r-rook, r-miniui): Move these
from here...
* gnu/packages/cran.scm: ...to here.
2019-01-07 15:05:27 +01:00
Pierre Neidhardt 3a3d4d9d54
Revert "gnu: Use package-elisp-from-package for clangs emacs lisp files"
This reverts commit 5bc2e14add.
2019-01-07 14:58:40 +01:00
Efraim Flashner 6fd2ed23ac
gnu: mantis: Limit to x86_64-linux.
* gnu/packages/bioinformatics.scm (mantis)[supported-systems]: New field.
2019-01-07 15:47:34 +02:00
Pierre Neidhardt e97b23e4bd
gnu: package-elisp-from-package: Clarify docstring.
* gnu/packages/emacs.scm (package-elisp-from-package)[docstring]: Clarify.
2019-01-07 14:45:21 +01:00
Tim Gesthuizen 5bc2e14add
gnu: Use package-elisp-from-package for clangs emacs lisp files
Use package-elisp-from-package for emacs-clang-format and emacs-clang-rename.
Also remove package-from-clang-elisp-file as it is not needed anymore.

* gnu/packages/llvm.scm (emacs-clang-format): Use package-elisp-from-package
* gnu/packages/llvm.scm (emacs-clang-rename): Use package-elisp-from-package
* gnu/packages/llvm.scm (package-from-clang-elisp-file): Remove function
2019-01-07 14:45:21 +01:00
Tim Gesthuizen 7d5856bd45
gnu: Add package-elisp-from-package
Add a function to generate package definitions that packages single elisp
files from other packages.

* gnu/packages/emacs.scm (package-elisp-from-package): New function
2019-01-07 14:45:21 +01:00
Ludovic Courtès 915c6bf60c
gnu: python2-fastlmm: Move to machine-learning.scm.
This is a step towards removing OCaml modules from the closure
of (gnu packages python).

* gnu/packages/python.scm (python2-fastlmm): Move to...
* gnu/packages/machine-learning.scm (python2-fastlmm): ... here.
2019-01-07 14:41:01 +01:00
Ludovic Courtès 6fd5a80dbe
gnu: Remove unnecessary build-side module imports.
* gnu/packages/batik.scm, gnu/packages/boost.scm,
gnu/packages/calendar.scm, gnu/packages/gl.scm,
gnu/packages/lua.scm, gnu/packages/qt.scm, gnu/packages/simulation.scm,
gnu/packages/terminals.scm: Remove unnecessary import of (guix build
utils).
* gnu/packages/emacs.scm: Remove unnecessary imports of (guix ...).
* gnu/packages/libcanberra.scm: Use (srfi srfi-1) instead of (guix build
utils) for 'alist-delete'.
* gnu/packages/wxwidgets.scm: Likewise.
2019-01-07 14:41:00 +01:00
Ludovic Courtès db1eb632be
gnu: Move Emacs modes for Dedukti to ocaml.scm.
This removes OCaml-related modules from the closure of (gnu packages
emacs).

* gnu/packages/emacs.scm (emacs-dedukti-mode, emacs-flycheck-dedukti):
Move to ...
* gnu/packages/ocaml.scm: ... here.
2019-01-07 14:41:00 +01:00
Ludovic Courtès 59a075047d
gnu: Move OCaml packages away from maths.scm.
This removes (gnu packages ocaml) and related build system modules from
the closure of (gnu packages maths).

* gnu/packages/maths.scm (ocaml-gsl, ocaml4.01-gsl, cubicle): Move to...
* gnu/packages/ocaml.scm: ... here.
2019-01-07 14:41:00 +01:00
Pierre Neidhardt 3b451546ed
gnu: Add rmlint.
* gnu/packages/disk.scm (rmlint): New variable.
2019-01-07 14:32:44 +01:00
Clément Lassieur e0aa5b5bbf
gnu: Add prosody-http-upload.
* gnu/packages/messaging.scm (prosody-http-upload): New variable.
2019-01-07 14:15:57 +01:00
Ricardo Wurmus e942813aac
gnu: Add mantis.
* gnu/packages/bioinformatics.scm (mantis): New variable.
2019-01-07 11:56:18 +01:00
Ricardo Wurmus ad6f13308b
gnu: Add sdsl-lite.
* gnu/packages/datastructures.scm (sdsl-lite): New variable.
2019-01-07 11:56:14 +01:00
Efraim Flashner c71bbfcca9
gnu: autoconf-archive: Update to 2019.01.06.
* gnu/packages/autotools.scm (autoconf-archive): Update to 2019.01.06.
2019-01-07 11:19:06 +02:00
Manolis Ragkousis 4d674b4143
gnu: Add jose.
* gnu/packages/jose.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-01-07 10:15:37 +02:00
Rutger Helling bd86a1bede
gnu: Add slurp.
* gnu/packages/image.scm (slurp): New variable.
2019-01-07 08:31:14 +01:00
Alex Vong c824dedf71
gnu: libarchive: Replace with libarchive 3.3.3 and fix CVE-2018-{1000877,1000878,1000880}.
* gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS.
[replacement]: New field.
(libarchive-3.3.3): New variable.
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-01-07 05:42:34 +08:00
Gabriel Hondet b7ec276e57
gnu: Add kitty.
* gnu/packages/terminals.scm (kitty): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-06 21:41:07 +01:00
Ludovic Courtès b5f8c2c885
hydra: Compute jobs in an inferior.
Previously we would rely on auto-compilation of all the Guix modules.
The complete evaluation would take ~15mn on berlin.guixsd.org and
require lots of RAM.  This approach should be faster since potentially
only part of the modules are rebuilt.  Furthermore, as a side-effect, it
builds the derivations that 'guix pull' uses.

* build-aux/hydra/gnu-system.scm: Remove 'eval-when' form.
(hydra-jobs): New procedure.
* gnu/ci.scm (package->alist, qemu-jobs, system-test-jobs)
(tarball-jobs): Return strings for the 'license' field.
* guix/self.scm (compiled-guix)[*cli-modules*]: Add (gnu ci).
2019-01-06 21:41:07 +01:00
Ludovic Courtès 59fb5c1cdb
hydra: Move job definitions to (gnu ci).
* build-aux/hydra/gnu-system.scm: Move code to...
* gnu/ci.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-01-06 21:41:07 +01:00
Efraim Flashner 0f763db448
gnu: gama: Update to 2.02.
* gnu/packages/gps.scm (gama): Update to 2.02.
2019-01-06 15:42:06 +02:00
Efraim Flashner 644353d80d
gnu: moe: Update to 1.10.
* gnu/packages/moe.scm (moe): Update to 1.10.
[license]: Fix license, gpl2+.
2019-01-06 15:42:06 +02:00
Efraim Flashner c007e35d24
gnu: recutils: Update to 1.8.
* gnu/packages/databases.scm (recutils): Update to 1.8.
[source]: Remove snippet.
[arguments]: Remove custom 'set-bash4.4-header-location phase. Enable
parallel tests.
[inputs]: Move check ...
[native-inputs]: ... to here. Add pkg-config.
2019-01-06 15:42:06 +02:00
Efraim Flashner 30e06c2cee
gnu: unrtf: Update to 0.21.10.
* gnu/packages/unrtf.scm (unrtf): Update to 0.21.10.
[source]: Remove patch, remove snippet.
[license]: Update to gpl3+.
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-06 15:42:05 +02:00
Efraim Flashner c65bfc658a
gnu: global: Update to 6.6.3.
* gnu/packages/code.scm (global): Update to 6.6.3.
2019-01-06 15:42:02 +02:00
Pierre Neidhardt 377038b8a2
gnu: emacs-evil-multiedit: Use version tag instead of commit.
* gnu/packages/emacs.scm (emacs-evil-multiedit): Use version tag instead of commit.
2019-01-06 13:22:09 +01:00
Rutger Helling a51ac7af7f
gnu: wine-staging: Add ffmpeg support.
* gnu/packages/wine.scm (wine-staging)[inputs]: Add ffmpeg.
2019-01-06 10:55:10 +01:00
Rutger Helling 0419c5741c
gnu: wine-staging: Update to 4.0-rc5.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.0-rc5.
* gnu/packages/wine.scm (wine-staging): Update to 4.0-rc5.
2019-01-06 10:32:05 +01:00
Efraim Flashner 99e61f3022
gnu: python-pyicu: Update to 2.2.
* gnu/packages/python.scm (python-pyicu): Update to 2.2.
2019-01-06 11:09:59 +02:00
Efraim Flashner a0bb4af215
gnu: python-pysocks: Update to 1.6.8.
* gnu/packages/python.scm (python-pysocks): Update to 1.6.8.
2019-01-06 11:09:58 +02:00
Efraim Flashner 1fb68eefa1
gnu: python-packaging: Update to 18.0.
* gnu/packages/python.scm (python-packaging): Update to 18.0.
2019-01-06 11:09:58 +02:00
Efraim Flashner 3cf324665d
gnu: python-astroid: Update to 2.1.0.
* gnu/packages/python.scm (python-astroid): Update to 2.1.0.
2019-01-06 11:09:58 +02:00
Efraim Flashner 36df69d6fe
gnu: python-imagesize: Update to 1.1.0.
* gnu/packages/python.scm (python-imagesize): Update to 1.1.0.
2019-01-06 11:09:57 +02:00
Efraim Flashner 46930b7ea9
gnu: python-sphinx-alabaster-theme: Update to 0.7.12.
* gnu/packages/python.scm (python-sphinx-alabaster-theme): Update to 0.7.12.
2019-01-06 11:09:57 +02:00
Efraim Flashner 681edb0a4f
gnu: python-pycryptodome: Update to 3.7.2.
* gnu/packages/python-crypto.scm (python-pycryptodome): Update to 3.7.2.
2019-01-06 11:09:56 +02:00
Efraim Flashner da3e0cd948
gnu: python-certifi: Update to 2018.11.29.
* gnu/packages/python-crypto.scm (python-certifi): Update to 2018.11.29.
2019-01-06 11:09:53 +02:00
Maxim Cournoyer d95d3d6224
gnu: emacs-diff-hl: Update to 1.8.5.
* gnu/packages/emacs.scm (emacs-diff-hl): Update to 1.8.5.
2019-01-05 21:38:34 -05:00
guy fleury iteriteka 9a2e4c5db3
gnu: Add fasm.
* gnu/packages/assembly.scm (fasm): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2019-01-05 19:26:05 -05:00
Lprndn e506b5e95d
gnu: Add nip2.
* gnu/packages/image-processing.scm (nip2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-06 00:22:05 +01:00
Efraim Flashner 210e43c762
gnu: hunspell-dict-en: Update to 2018-04-16.
* gnu/packages/aspell.scm (aspell-word-list): Update to 2018.04.16.
[arguments]: Use 'invoke'.
2019-01-05 22:55:14 +02:00
Efraim Flashner 15ad9eb6d0
gnu: hunspell: Update to 1.7.0.
* gnu/packages/libreoffice.scm (hunspell): Update to 1.7.0.
[source]: Use 'git-fetch'.
2019-01-05 22:55:14 +02:00
Efraim Flashner 87fd7a35c2
gnu: streamlink: Fix build.
* gnu/packages/video.scm (streamlink)[source]: Add patch.
* gnu/packages/patches/streamlink-update-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-01-05 22:55:14 +02:00
Efraim Flashner 918a9b584d
gnu: python-iso3166: Update to 0.9.
* gnu/packages/iso-codes.scm (python-iso3166): Update to 0.9.
2019-01-05 22:55:14 +02:00
Efraim Flashner 9350a08432
gnu: po4a: Update to 0.55.
* gnu/packages/gettext.scm (po4a): Update to 0.55.
[arguments]: Add 'patch-docbook-xml phase to patch references to
docbook-xml. Update custom 'disable-failing-tests phase.
[native-inputs]: Replace docbook-xml with docbook-xml-4.1.2.
2019-01-05 22:55:13 +02:00
Efraim Flashner 5af020bb3c
gnu: python-scripttest: Use pypi uri.
* gnu/packages/check.scm (python-scripttest)[source]: Use pypi uri.
2019-01-05 22:55:13 +02:00
Efraim Flashner d70cb3e008
gnu: python-pytest-xdist: Update to 1.25.0.
* gnu/packages/check.scm (python-pytest-xdist): Update to 1.25.0.
[source]: Update source uri.
2019-01-05 22:55:13 +02:00
Efraim Flashner f98091d1ba
gnu: python-pytest-cov: Update to 2.6.0.
* gnu/packages/check.scm (python-pytest-cov): Update to 2.6.0.
2019-01-05 22:55:13 +02:00
Efraim Flashner 4df24531dc
gnu: python-subunit: Update to 1.3.0.
* gnu/packages/check.scm (python-subunit): Update to 1.3.0.
[home-page]: Use https.
2019-01-05 22:55:10 +02:00
Arun Isaac b18b9d2042
gnu: octave: Fix makeinfo path configuration.
* gnu/packages/maths.scm (octave-cli)[arguments]: Fix makeinfo path
configuration in configure-makeinfo phase.
2019-01-05 23:49:59 +05:30
Eric Bavier 0dd8da0b1d
gnu: youtube-viewer: Install desktop file.
* gnu/packages/video.scm (youtube-viewer)[arguments]: Add 'install-desktop
phase.
2019-01-05 11:34:16 -06:00
Ricardo Wurmus a773f141cb
gnu: Add paps.
* gnu/packages/pdf.scm (paps): New variable.
2019-01-05 17:24:38 +01:00
Efraim Flashner e4be1faa43
gnu: python-isodate: Update to 0.6.0.
* gnu/packages/time.scm (python-isodate): Update to 0.6.0.
[native-inputs]: Add python-six.
[home-page]: Update to new home-page.
2019-01-04 16:17:18 +02:00
Efraim Flashner d1e75921b2
gnu: python-tzlocal: Update to 1.5.1.
* gnu/packages/time.scm (python-tzlocal): Update to 1.5.1.
[arguments]: Add custom phase to fix symlink issue in pypi release.
[native-inputs]: Add python-mock.
[license]: Update to expat.
2019-01-04 16:17:14 +02:00
Efraim Flashner f20cfa0665
gnu: python-ruamel.yaml: Update to 0.15.83.
* gnu/packages/serialization.scm (python-ruamel.yaml): Update to 0.15.83.
2019-01-04 15:40:35 +02:00
Mathieu Othacehe 548642db8a
gnu: video: Add missing copyright.
* gnu/packages/video.scm: Add copyright.
2019-01-04 11:43:06 +01:00
Mathieu Othacehe 34a19d3595
gnu: vlc: Fix typo in synopsis.
* gnu/packages/video.scm (vlc)[synopsis]: Fix typo.
2019-01-04 11:41:35 +01:00
Hartmut Goebel fb0356d956
gnu: kservice: Transfer patches from NixOS.
Transfer the NixOS patches for kservice as of 2018-02-17.
- Make QDirIterator follow symlinks.
- Normalize path, but don't resolve symlinks.

* gnu/packages/kde-frameworks.scm(kservice)<patch>: New phase.
2019-01-04 10:10:46 +01:00
Hartmut Goebel 0fd6138175
gnu: kpackage: Transfer patches from NixOS.
Transfer the NixOS patches for kpackage as of 2018-02-17:
- Allow external paths.
- Make QDirIterator follow symlinks.

Decided to use a patch for one of the "allow external paths" changes since
'substitute*' seems not to be robust enough.

* gnu/packages/patches/kpackage-allow-external-paths.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kpackage)[source]: Use it. <patch>: New
  phase.
2019-01-04 10:10:46 +01:00
Hartmut Goebel 16b8aff85b
gnu: kinit: Use LIBRARY_PATH to search for dynamically loaded libs.
Transfer the NixOS "kdeinit-libpath" patch for kinit as of
2018-02-17.

* gnu/packages/patches/kinit-kdeinit-libpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
2019-01-04 10:10:44 +01:00
Hartmut Goebel f8a0f3ac70
gnu: kinit: Use the store paths for dynamically loaded libs.
Transfer the NixOS "kdeinit-extra_libs" patch for kinit as of
2018-02-17.

* gnu/packages/patches/kinit-kdeinit-extra_libs.patch: New filee.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm (kinit)[source]: Use it.
  <patch-paths>: New phase.
  [inputs]: Add kparts, plasma-framework.
2019-01-04 10:10:43 +01:00
Hartmut Goebel a6e532815d
gnu: kio: Search 'smbd' on $PATH.
Transfer the remaining NixOS patch for kio as of 2018-02-17.

* gnu/packages/patches/kio-search-smbd-on-PATH.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/kde-frameworks.scm(kio)<source>: Use it.
2019-01-04 10:10:42 +01:00
Hartmut Goebel 8791aa98a7
gnu: kdelibs4support: Add todo comment for a patch from NixOS.
* gnu/packages/kde-frameworks.scm(kdelibs4support): Add comment.
2019-01-04 10:10:41 +01:00
Hartmut Goebel daff96de1f
gnu: kconfigwidgets: Make QDirIterator follow symlinks.
Transfer the NixOS patch "qdiriterator-follow-symlinks" for kconfigwidgets as
of 2018-02-17.

* gnu/packages/kde-frameworks.scm(kconfigwidgets)<patch>: New phase.
2019-01-04 10:10:40 +01:00
Hartmut Goebel be8cb44a9c
gnu: kcmutils: Print plugin name when loading fails.
Transfer the NixOS patch "kcmutils-debug-module-loader" for kcmutils as of
2018-02-17.

* gnu/packages/kde-frameworks.scm(kcmutils)<patch>: Add substitute for
  src/kcmoduleloader.cpp.
2019-01-04 10:10:39 +01:00
Hartmut Goebel fd8c53cb9e
gnu: kcmutils: Make QDirIterator follow symlinks.
Transfer the NixOS patch "kcmutils-follow-symlinks" for kcmutils as of
2018-02-17.

* gnu/packages/kde-frameworks.scm(kcmutils)<patch>: New phase.
2019-01-04 10:10:38 +01:00
Hartmut Goebel b824dbec5d
gnu: krunner: Blacklist another test failing with 5.49.0.
* gnu/packages/kde-frameworks.scm(krunner)[#phases]<check-setup>:
  Blacklist 'testMulti'.
2019-01-04 10:01:08 +01:00
Hartmut Goebel 69b6086182
gnu: extra-cmake-modules: Fix install-path for plugins.
The respective entry changed for kde-frameworks 5.46.

* gnu/packages/kde-frameworks.scm(krunner)[#phases]<fix-lib-path>:
  Change substitute for QTPLUGINDIR.
2019-01-04 10:01:08 +01:00
Efraim Flashner ac277bc7c5
gnu: libsecret: Update to 0.18.7.
* gnu/packages/gnome.scm (libsecret): Update to 0.18.7.
2019-01-04 09:20:50 +02:00
Efraim Flashner 0528f70d3d
gnu: goffice: Update to 0.10.44.
* gnu/packages/gnome.scm (goffice): Update to 0.10.44.
2019-01-04 09:20:48 +02:00
Alex Vong 5651e74cc6
gnu: guile-gnunet: Update to 0.0-1.d12167a.
* gnu/packages/gnunet.scm (guile-gnunet): Update to 0.0-1.d12167a.
[version]: Use git-version.
[source]: Use git-file-name.
2019-01-04 07:34:25 +08:00
Alex Vong 47719c9bc0
gnu: libmicrohttpd: Update to 0.9.62.
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.62.
2019-01-04 07:34:08 +08:00
Alex Vong 8f36c8e9ea
gnu: libextractor: Fix CVE-2018-{20430,20431}.
* gnu/packages/patches/libextractor-CVE-2018-20430.patch,
gnu/packages/patches/libextractor-CVE-2018-20431.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnunet.scm (libextractor)[source]: Use them.
2019-01-04 07:33:46 +08:00
Alex Vong 1983a9b0a5
gnu: libextractor: Update to 1.8.
* gnu/packages/gnunet.scm (libextractor): Update to 1.8.
2019-01-04 07:32:38 +08:00
Ricardo Wurmus 6ec95a003b
gnu: yoshimi: Update to 1.5.10.
* gnu/packages/music.scm (yoshimi): Update to 1.5.10.
2019-01-03 23:14:38 +01:00
Kei Kebreau b634b5c253
gnu: vboot-utils: Fix building on armhf-linux.
* gnu/packages/bootloaders.scm (vboot-utils)[source]: Add patches.
[arguments]: Conditionally add "HOST_ARCH=arm" to #:make-flags.
* gnu/packages/patches/vboot-utils-fix-format-load-address.patch,
gnu/packages/patches/vboot-utils-fix-tests-show-contents.patch,
gnu/packages/patches/vboot-utils-skip-test-workbuf.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-01-03 15:40:27 -05:00
Efraim Flashner 824fc425dd
gnu: gnupg: Update to 2.2.12.
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.12.
2019-01-03 22:14:22 +02:00
Mathieu Othacehe fc2982f754
gnu: vlc: Add protobuf to inputs.
* gnu/packages/video.scm (vlc)[inputs]: Add protobuf.
2019-01-03 20:38:16 +01:00
Mathieu Othacehe 78d112c2ff
gnu: vlc: Add libmicrodns to inputs.
* gnu/packages/video.scm (vlc)[inputs]: Add libmicrodns.
2019-01-03 20:38:16 +01:00
Mathieu Othacehe 498911d315
gnu: Add libmicrodns.
* gnu/packages/dns.scm (libmicrodns): New package.
2019-01-03 20:38:16 +01:00
Efraim Flashner 4382cef28c
gnu: xdisorg.scm: Add missing import.
* gnu/packages/xdisorg.scm: Add missing import.
2019-01-03 16:25:31 +02:00
Efraim Flashner fbb456dda1
gnu: bullet: Update to 2.88.
* gnu/packages/game-development.scm (bullet): Update to 2.88.
[source]: Use 'git-fetch'. Add snippet to remove bundled binaries and
libraries.
[arguments]: Add configure-flags to prevent building demos. Add custom
'remove-failing-tests phase to skip tests which fail after removing
bundled code.
2019-01-03 16:21:42 +02:00
Rutger Helling 95bf2fb637
gnu: Add wl-clipboard.
* gnu/packages/xdisorg.scm (wl-clipboard): New variable.
2019-01-03 14:58:34 +01:00
Danny Milosavljevic df147c4fdb
gnu: emacs-magit-svn: Fix build.
* gnu/packages/emacs.scm (emacs-magit-svn): Replace ',name' by
'"emacs-magit-svn"'.
2019-01-03 10:30:23 +01:00
Maxim Cournoyer 707efe171a
gnu: gnucash: Fix test failure.
Fixes issue #32057 (see: https://issues.guix.info/issue/32057).

* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnucash.scm (gnucash): Use it.
2019-01-02 17:10:08 -05:00
Efraim Flashner d804a40a51
gnu: emacs-hydra: Update to 0.14.0.
* gnu/packages/emacs.scm (emacs-hydra): Update to 0.14.0.
2019-01-02 22:11:05 +02:00
Efraim Flashner 2e689c22b3
gnu: emacs-edit-indirect: Update to 0.1.5.
* gnu/packages/emacs.scm (emacs-edit-indirect): Update to 0.1.5.
[source]: Use 'git-fetch'.
2019-01-02 22:11:05 +02:00
Efraim Flashner 33678041ce
gnu: signing-party: Update to 2.7.
* gnu/packages/gnupg.scm (signing-party): Update to 2.7.
[home-page]: Update to new home-page.
[arguments]: All phases end with #t.
2019-01-02 22:11:05 +02:00
Efraim Flashner c7a2b36daf
gnu: perl-archive-zip: Update to 1.64.
* gnu/packages/comression.scm (perl-archive-zip): Update to 1.64.
2019-01-02 22:11:04 +02:00
Efraim Flashner 2f325b6391
gnu: zstd: Update to 1.3.8.
* gnu/packages/compression.scm (zstd): Update to 1.3.8.
[home-page]: Update to new home-page.
2019-01-02 22:11:04 +02:00
Efraim Flashner a1815fe6e1
gnu: perl-yaml-tiny: Update to 1.73.
* gnu/packages/perl.scm (perl-yaml-tiny): Update to 1.73.
2019-01-02 22:11:03 +02:00
Efraim Flashner 767e00ec23
gnu: perl-json-maybexs: Update to 1.004000.
* gnu/packages/perl.scm (perl-json-maybexs): Update to 1.004000.
2019-01-02 22:11:03 +02:00
Efraim Flashner 150e3b924a
gnu: perl-cpanel-json-xs: Update to 4.08.
* gnu/packages/perl.scm (perl-cpanel-json-xs): Update to 4.08.
2019-01-02 22:11:02 +02:00
Efraim Flashner 31d9f55271
gnu: perl-test-mockmodule: Update to 0.170.0.
* gnu/packages/perl-check.scm (perl-test-mockmodule): Update to 0.170.0.
[source]: Update source uri.
[native-inputs]: Add perl-test-warnings.
2019-01-02 22:11:02 +02:00
Efraim Flashner 548c120b57
gnu: perl-test-simple: Update to 1.302141.
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302141.
2019-01-02 22:10:58 +02:00
Efraim Flashner afbf9763fa
gnu: qtsyncthingtray: Use 'git-fetch'.
* gnu/packages/sync.scm (qtsyncthingtray)[source]: Use 'git-fetch'.
[arguments]: Update custom 'install phase.
2019-01-02 19:53:06 +02:00
Efraim Flashner a69f071537
gnu: owncloud-client: Update to 2.5.1.10973.
* gnu/packages/sync.scm (owncloud-client): Update to 2.5.1.10973.
* gnu/packages/patches/owncloud-disable-updatecheck.patch: Update patch.
2019-01-02 19:53:06 +02:00
Efraim Flashner 2879e605bf
gnu: qtkeychain: Update to 0.9.1.
* gnu/packages/qt.scm (qtkeychain): Update to 0.9.1.
[source]: Use 'git-fetch'.
[arguments]: Update custom 'set-qt-trans-dir phase.
2019-01-02 19:53:03 +02:00
Ricardo Wurmus 9fb5771af7
gnu: jupyter: Add missing dependency.
* gnu/packages/python.scm (jupyter)[propagated-inputs]: Add python-qtconsole.
[home-page]: Use https URL.
[arguments]: Update comment on why tests are disabled.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus d47b21c69c
gnu: python-terminado: Update to 0.8.1.
* gnu/packages/python-web.scm (python-terminado): Update to 0.8.1.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus 38306e1168
gnu: Add python-qtconsole.
* gnu/packages/python.scm (python-qtconsole): New variable.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus 91dd8b3687
gnu: python-notebook: Update to 5.7.4.
* gnu/packages/python.scm (python-notebook): Update to 5.7.4.
[arguments]: Use INVOKE for tests.
[propagated-inputs]: Remove python-ipython; add python-prometheus-client,
python-send2trash, and python-terminado.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus 493e5e6daa
gnu: python-jupyter-console: Fix inputs.
* gnu/packages/python.scm (python-jupyter-console)[propagated-inputs]: Remove
python-ipython; replace python-prompt-toolkit with python-prompt-toolkit-1.
[native-inputs]: Add python-nose.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus 4fc112b452
gnu: python-ipython: Remove dependency on python-jupyter-core-minimal.
* gnu/packages/python.scm (python-ipython)[propagated-inputs]: Remove
python-jupyter-core-minimal.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus 88bf9be38e
gnu: python-ipywidgets: Enable tests.
* gnu/packages/python.scm (python-ipywidgets)[arguments]: Remove.
[native-inputs]: Add python-nose and python-pytest.
[propagated-inputs]: Remove python-ipykernel.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus fec14302d5
gnu: python-widgetsnbextension: Update to 3.4.2.
* gnu/packages/python.scm (python-widgetsnbextension): Update to 3.4.2.
[propagated-inputs]: Add python-ipykernel.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus b6fc288e57
gnu: Add python-send2trash.
* gnu/packages/python.scm (python-send2trash, python2-send2trash): New
variables.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus abe50aa369
gnu: Add python-prometheus-client.
* gnu/packages/python.scm (python-prometheus-client,
python2-prometheus-client): New variables.
2019-01-02 16:33:57 +01:00
Ricardo Wurmus ffabccb22f
gnu: python-jupyter-client: Update to 5.2.4.
* gnu/packages/python.scm (python-jupyter-client): Update to 5.2.4.
2019-01-02 16:33:57 +01:00