Commit Graph

45053 Commits

Author SHA1 Message Date
Ricardo Wurmus 2d1d59ab57
gnu: r-rhisat2: Update to 1.0.2.
* gnu/packages/bioconductor.scm (r-rhisat2): Update to 1.0.2.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 61730c3db4
gnu: r-aucell: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.6.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 823e23fffe
gnu: r-msnbase: Update to 2.10.1.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.10.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 85e067161a
gnu: r-iranges: Update to 2.18.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 303862330b
gnu: r-numderiv: Update to 2016.8-1.1.
* gnu/packages/statistics.scm (r-numderiv): Update to 2016.8-1.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus eb3f1c2d24
gnu: r-quantreg: Update to 5.40.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.40.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus e95d5ad958
gnu: r-fpc: Update to 2.2-2.
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-2.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus d0b3d10e80
gnu: r-prabclus: Update to 2.3-1.
* gnu/packages/statistics.scm (r-prabclus): Update to 2.3-1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus cb6d481561
gnu: r-e1071: Update to 1.7-2.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-2.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 6155b589c3
gnu: r-xml: Update to 3.98-1.20.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.20.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 815c7389b7
gnu: r-dbplyr: Update to 1.4.1.
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.1.
2019-06-09 15:19:58 +02:00
Ricardo Wurmus 0638ee43a4
gnu: r-tibble: Update to 2.1.3.
* gnu/packages/statistics.scm (r-tibble): Update to 2.1.3.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus e7bc880274
gnu: r-markdown: Update to 1.0.
* gnu/packages/statistics.scm (r-markdown): Update to 1.0.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 754f09a333
gnu: r-rsvd: Update to 1.0.1.
* gnu/packages/cran.scm (r-rsvd): Update to 1.0.1.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 85f3ec6a7b
gnu: r-iso: Update to 0.0-18.
* gnu/packages/cran.scm (r-iso): Update to 0.0-18.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus bf6895ef4f
gnu: r-performance: Update to 0.2.0.
* gnu/packages/cran.scm (r-performance): Update to 0.2.0.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus a1473cb4ec
gnu: r-sjstats: Update to 0.17.5.
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.5.
[propagated-inputs]: Add r-bayestestr and r-performance; remove r-matrix.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 5bdc59c6a9
gnu: r-proc: Update to 1.15.0.
* gnu/packages/cran.scm (r-proc): Update to 1.15.0.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus bc418c97ad
gnu: r-sjlabelled: Update to 1.1.0.
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.0.
[propagated-inputs]: Remove r-dplyr; add r-tidyselect.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 9ce3d17ee3
gnu: r-tseries: Update to 0.10-47.
* gnu/packages/cran.scm (r-tseries): Update to 0.10-47.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus f7f65cbaa6
gnu: r-statnet-common: Update to 4.3.0.
* gnu/packages/cran.scm (r-statnet-common): Update to 4.3.0.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 154e20e5f3
gnu: r-seriation: Update to 1.2-7.
* gnu/packages/cran.scm (r-seriation): Update to 1.2-7.
2019-06-09 15:19:57 +02:00
Ricardo Wurmus 8e0267f6e4
gnu: r-stringdist: Update to 0.9.5.2.
* gnu/packages/cran.scm (r-stringdist): Update to 0.9.5.2.
2019-06-09 15:19:57 +02:00
Marius Bakke 69ecd666d7
Merge branch 'master' into staging 2019-06-09 00:57:36 +02:00
Tobias Geerinckx-Rice c6de5afe5c
gnu: git: Update to 2.22.0.
* gnu/packages/version-control.scm (git): Update to 2.22.0.
2019-06-09 00:01:10 +02:00
Marius Bakke 80fa745cf9
gnu: notmuch: Update to 0.29.
* gnu/packages/mail.scm (notmuch): Update to 0.29.
[source]: Change to ".xz" tarball.
2019-06-08 23:49:46 +02:00
Marius Bakke 04aec35b78
gnu: po4a: Update to 0.56.
* gnu/packages/gettext.scm (po4a): Update to 0.56.
2019-06-08 23:49:46 +02:00
Marius Bakke 2ea01d91b8
gnu: ceph: Update to 13.2.6.
* gnu/packages/storage.scm (ceph): Update to 13.2.6.
2019-06-08 23:49:46 +02:00
Ricardo Wurmus fc1ff7fc97
gnu: jalv-select: Update to 1.3.
* gnu/packages/music.scm (jalv-select): Update to 1.3.
[arguments]: Do not patch jalv.select.h.
2019-06-08 21:39:22 +02:00
Tobias Geerinckx-Rice 7e6764c1d2
gnu: gtkwave: Update to 3.3.101.
* gnu/packages/fpga.scm (gtkwave): Update to 3.3.101.
2019-06-08 07:30:26 +02:00
Tobias Geerinckx-Rice de7f9b233f
gnu: newt: Update to 0.52.21.
* gnu/packages/slang.scm (newt): Update to 0.52.21.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice fdf1108abb
gnu: v4l-utils: Update to 1.16.6.
* gnu/packages/video.scm (v4l-utils): Update to 1.16.6.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice ecdc2f8276
gnu: livemedia-utils: Update to 2019.05.29.
* gnu/packages/video.scm (livemedia-utils): Update to 2019.05.29.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice 232a7e69ce
installer: Fix typo.
* gnu/installer/newt/network.scm (run-technology-page): Fix plural typo.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice 49405aaf5c
gnu: allegro: Update to 5.2.5.0.
* gnu/packages/game-development.scm (allegro): Update to 5.2.5.0.
[source]: Remove patch.
* gnu/packages/patches/allegro-mesa-18.2.5-and-later.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice 9828859c29
gnu: newt: Don't use NAME in source URI.
* gnu/packages/slang.scm (newt)[source]: Hard-code NAME.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice 2b6bdf6493
gnu: babl: Update to 0.1.64.
* gnu/packages/gimp.scm (babl): Update to 0.1.64.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice 18dd9cbc72
gnu: font-gnu-unifont: Update to 12.1.02.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.1.02.
2019-06-08 02:30:25 +02:00
Tobias Geerinckx-Rice f990bda402
gnu: font-gnu-unifont: Add Unifoundry source URL.
* gnu/packages/fonts.scm (font-gnu-unifont)[source]: Add unifoundry.com.
2019-06-08 02:30:24 +02:00
Tobias Geerinckx-Rice b5efe22a94
gnu: tmux-xpanes: Update to 4.1.1.
* gnu/packages/tmux.scm (tmux-xpanes): Update to 4.1.1.
2019-06-08 02:30:24 +02:00
Ludovic Courtès f54cab2784
import: utils: 'specs->package-lists' correctly matches "out".
* guix/import/utils.scm (specs->package-lists): Match "out", not ("out").
2019-06-07 22:55:50 +02:00
Ludovic Courtès c0a4db6697
import: print: Honor the outputs of inputs (!).
Fixes <http://bugs.gnu.org/35893>.
Reported by Jesse Gibbons <jgibbons2357@gmail.com>.

* guix/import/print.scm (package->code)[package-lists->code]: Preserve
OUT in the result.
* tests/print.scm (define-with-source): New macro.
(pkg): Use it.
(pkg-source): New variable.
(pkg-with-inputs, pkg-with-inputs-source): New variables.
("simple package"): Refer to 'pkg-source'.
("package with inputs"): New test.
2019-06-07 22:49:47 +02:00
Ludovic Courtès d998902214
installer: Install xterm alongside ratpoison.
* gnu/installer/services.scm (%system-services) <"ratpoison">: Add
xterm.
2019-06-07 22:32:19 +02:00
Ludovic Courtès 676eb5880e
installer: Install companion packages alongside i3.
Fixes <http://bugs.gnu.org/36008>.
Suggested by Giovanni Biscuolo <g@xelera.eu>.

* gnu/installer/services.scm (%system-services) <"i3">: Add i3status,
dmenu, and st.
2019-06-07 22:32:10 +02:00
Ludovic Courtès 78b0f9419f
nls: Update 'de' translation of the manual. 2019-06-07 21:59:56 +02:00
Ludovic Courtès 0e6cee21a4
gnu: glibc-locales: Install symlinks using the normalized codeset.
Fixes <https://bugs.gnu.org/36076>.
Reported by Jack Hill <jackhill@jackhill.us>
and Giovanni Biscuolo <g@xelera.eu>

* gnu/build/locale.scm (locale->name+codeset): New file.
* gnu/packages/base.scm (make-glibc-locales): Add #:modules
and #:imported-modules.  Add a 'symlink-normalized-codesets' phase.
2019-06-07 21:50:18 +02:00
Ludovic Courtès 15ec93a783
Add (gnu build locale).
* gnu/build/locale.scm: New file.
* gnu/local.mk (MODULES_NOT_COMPILED): Add it.
* gnu/installer/locale.scm (normalize-codeset): Remove.
* gnu/system/locale.scm (localedef-command): Remove.
(single-locale-directory): Use (gnu build locale).
(glibc-supported-locales)[build]: Likewise, and remove
'read-supported-locales'.
2019-06-07 21:50:18 +02:00
Tobias Geerinckx-Rice bc48088b14
gnu: libebml: Update to 1.3.9.
* gnu/packages/xml.scm (libebml): Update to 1.3.9.
2019-06-07 18:36:03 +02:00
Tobias Geerinckx-Rice ad8e5a5332
gnu: libmatroska: Update to 1.5.2.
* gnu/packages/video.scm (libmatroska): Update to 1.5.2.
2019-06-07 18:36:03 +02:00
Tobias Geerinckx-Rice 94f7f9503a
gnu: vlc: Update to 3.0.7.
* gnu/packages/video.scm (vlc): Update to 3.0.7.
2019-06-07 18:36:03 +02:00