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34595 Commits

Author SHA1 Message Date
Kyle Meyer bff861ece5
gnu: Add emacs-git-annex. 
* gnu/packages/emacs.scm (emacs-git-annex): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-08-26 01:47:40 +02:00
Kyle Meyer 8a9e0b6ebf
gnu: emacs-recent-addresses: Add missing words to description. 
* gnu/packages/emacs.scm (emacs-recent-addresses)[description]: Add missing
words.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-08-26 01:47:40 +02:00
Kei Kebreau 7d01ee66d4
gnu: Add avogadro. 
* gnu/packages/chemistry.scm (avogadro): New variable.
* gnu/packages/patches/avogadro-boost148.patch,
gnu/packages/patches/avogadro-eigen3-update.patch,
gnu/packages/patches/avogadro-python-eigen-lib.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2018-08-25 17:05:30 -04:00
Marius Bakke 94e9d750a2
gnu: libx11: Replace with 1.6.6 [security fixes]. 
This fixes CVE-2018-14599, CVE-2018-14600, and CVE-2018-14598.

* gnu/packages/xorg.scm (libx11)[replacement]: New field.
(libx11-1.6.6): New public variable.
 2018-08-25 16:32:06 +02:00
宋文武 7789bf9531
gnu: dante: Disable preloading to make 'sockd' work. 
* gnu/packages/networking.scm (dante)[arguments]: Pass '--disable-preload'
to #:configure-flags.
 2018-08-25 16:40:21 +08:00
Leo Famulari 36a8d5cdf4
gnu: OpenSSH: Update to 7.8p1. 
* gnu/packages/ssh.scm (openssh): Update to 7.8p1.
[source]: Remove 'openssh-CVE-2018-15473.patch'.
* gnu/packages/patches/openssh-CVE-2018-15473.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-08-24 17:04:58 -04:00
Leo Famulari 841ede7f87
nls: Update 'de' translation. 2018-08-24 16:45:39 -04:00
Ludovic Courtès dccd29d17d
import: cpan: Adjust test to new URL. 
This is a followup to 9aba9b1278.

* tests/cpan.scm ("cpan->guix-package"): Adjust 'home-page' URL.
 2018-08-24 18:04:07 +02:00
Ludovic Courtès 93c333895a
grafts: Add (guix build debug-link) and use it. 
Fixes <https://bugs.gnu.org/19973>.
Reported by Mark H Weaver <mhw@netris.org>.

* guix/build/debug-link.scm: New file.
* guix/build/graft.scm (%graft-hooks): New variable.
(graft): Add #:hooks and honor it.
* guix/grafts.scm (graft-derivation/shallow): Add (guix build
debug-link) and (guix elf) to #:modules.
* tests/debug-link.scm: New file.
* Makefile.am (MODULES): Add guix/build/debug-link.scm.
(SCM_TESTS): Add tests/debug-link.scm.
 2018-08-24 18:01:05 +02:00
Ludovic Courtès e4297aa8b9
grafts: Add high-level 'graft' procedure on the build side. 
* guix/build/graft.scm (graft): New procedure.
* guix/grafts.scm (graft-derivation/shallow)[build]: Use it instead of
inline code.
 2018-08-24 17:57:56 +02:00
Ludovic Courtès c1352b4bad
gnu: font-gnu-unifont: Update to 11.0.02. 
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 11.0.02.
[arguments]: Adjust code to install 'unifont.info.gz' in 'install'
phase.
 2018-08-24 17:54:10 +02:00
Ludovic Courtès bf0bb925ea
gnu: gdb: Update to 8.1.1. 
* gnu/packages/gdb.scm (gdb): Update to 8.1.1.
 2018-08-24 17:50:52 +02:00
Ricardo Wurmus 079cdd9c15
gnu: Add find-circ. 
* gnu/packages/bioinformatics.scm (find-circ): New variable.
 2018-08-24 11:20:19 +02:00
Tobias Geerinckx-Rice 4a3cf8929f
gnu: r-catools: Update to 1.17.1.1. 
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.1.
 2018-08-24 04:25:50 +02:00
Tobias Geerinckx-Rice 0e5d66abf6
gnu: keepassxc: Update to 2.3.4. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.3.4.
[arguments]: Remove obsolete ‘patch-sources’ phase.
 2018-08-24 04:25:50 +02:00
Tobias Geerinckx-Rice a7b14a1b39
gnu: capstone: Update to 3.0.5. 
* gnu/packages/engineering.scm (capstone): Update to 3.0.5.
[arguments]: Set cstool's LDFLAGS in the environment instead of
SUBSTITUTE*ing the Makefile.
 2018-08-24 03:04:56 +02:00
Tobias Geerinckx-Rice 77c027b98b
gnu: r-trimcluster: Update to 0.1-2.1. 
* gnu/packages/statistics.scm (r-trimcluster): Update to 0.1-2.1.
 2018-08-24 02:30:43 +02:00
Tobias Geerinckx-Rice 6d83cd1f9a
gnu: r-synchronicity: Update to 1.3.5. 
* gnu/packages/statistics.scm (r-synchronicity): Update to 1.3.5.
 2018-08-24 02:30:42 +02:00
Tobias Geerinckx-Rice 6a9a50fd2f
gnu: guile-lib: Update to 0.2.6.1. 
* gnu/packages/guile.scm (guile-lib): Update to 0.2.6.1.
[source]: Remove obsolete snippet.
 2018-08-24 02:30:42 +02:00
Tobias Geerinckx-Rice a0a7e42500
gnu: tuxguitar: Update to 1.5.2. 
* gnu/packages/music.scm (tuxguitar): Update to 1.5.2.
[source]: Remove obsolete snippet.
 2018-08-24 02:30:41 +02:00
Tobias Geerinckx-Rice 38146797e6
gnu: libgig: Update to 4.1.0. 
* gnu/packages/music.scm (libgig): Update to 4.1.0.
 2018-08-24 02:30:41 +02:00
Tobias Geerinckx-Rice f6181921e5
gnu: denemo: Use INVOKE. 
* gnu/packages/music.scm (denemo)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-08-24 02:30:41 +02:00
Tobias Geerinckx-Rice fbde7b08e5
gnu: ncmpc: Update to 0.29. 
* gnu/packages/mpd.scm (ncmpc): Update to 0.29.
[build-system]: Switch to Meson.
[arguments]: Find ncurses.h.
[native-inputs]: Add gettext.
 2018-08-24 02:30:41 +02:00
Ludovic Courtès 0b4e5f7e5b
gnu: parallel: Update to 20180822. 
* gnu/packages/parallel.scm (parallel): Update to 20180822.
 2018-08-24 00:40:09 +02:00
Ludovic Courtès 444488fc1b
gnu: boost: Move 1.59.0 definition to boost.scm. 
Fixes a regression introduced in commit
7cbf06d8c2 where the top-level code of
these two modules would depend on each other, leading to "boost: unbound
variable" kind of errors in some circumstances.

* gnu/packages/databases.scm (boost-for-mysql): Move to...
* gnu/packages/boost.scm (boost-for-mysql): ... here.  Make public and
add 'properties' field.
 2018-08-24 00:36:04 +02:00
Tobias Geerinckx-Rice d32da49c76
gnu: r-devtools: Update to 1.13.6. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.6.
 2018-08-23 23:11:52 +02:00
Tobias Geerinckx-Rice c95f9f09a7
gnu: drumkv1: Update to 0.9.2. 
* gnu/packages/music.scm (drumkv1): Update to 0.9.2.
 2018-08-23 23:01:56 +02:00
Tobias Geerinckx-Rice 69b4d24871
gnu: synthv1: Update to 0.9.2. 
* gnu/packages/music.scm (synthv1): Update to 0.9.2.
 2018-08-23 23:01:56 +02:00
Tobias Geerinckx-Rice 29618d6722
gnu: samplv1: Update to 0.9.2. 
* gnu/packages/music.scm (samplv1): Update to 0.9.2.
 2018-08-23 23:01:56 +02:00
Tobias Geerinckx-Rice 2c59066f6a
gnu: padthv1: Update to 0.9.2. 
* gnu/packages/music.scm (padthv1): Update to 0.9.2.
 2018-08-23 23:01:56 +02:00
Tobias Geerinckx-Rice 9459216aa1
gnu: Update home pages for the V1 synth family. 
* gnu/packages/music.scm (synthv1, drumkv1, samplv1, padthv1)
[home-page]: Update & use HTTPS.
 2018-08-23 23:01:55 +02:00
pimi 16b0e8da48
gnu: Add r-a3. 
gnu/packages/cran.scm (r-a3): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-23 16:26:40 -04:00
pimi 881cc61c1b
gnu: Add r-manipulatewidget. 
gnu/packages/cran.scm (r-manipulatewidget): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-23 16:26:40 -04:00
pimi 87b576aa8b
gnu: Add r-slam. 
gnu/packages/cran.scm (r-slam): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-23 16:26:40 -04:00
pimi c994418b8c
gnu: Add r-abcanalysis. 
gnu/packages/cran.scm (r-abcanalysis): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-23 16:26:40 -04:00
pimi 67cf070239
gnu: Add r-miniui. 
gnu/packages/web.scm (r-miniui): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-08-23 16:26:40 -04:00
Tobias Geerinckx-Rice 694765e1d6
gnu: qjackctl: Update to 0.5.3. 
* gnu/packages/audio.scm (qjackctl): Update to 0.5.3.
 2018-08-23 17:16:42 +02:00
Tobias Geerinckx-Rice 97353dfb69
gnu: byobu: Update home page. 
* gnu/packages/screen.scm (byobu)[home-page]: Update & use HTTPS.
 2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice 9e29921162
gnu: byobu: Update to 5.127. 
* gnu/packages/screen.scm (byobu): Update to 5.127.
* gnu/packages/patches/byobu-writable-status.patch: Adjust context
accordingly.
 2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice f868276b8a
gnu: wine-staging-patchset-data: Don't use unstable archive. 
* gnu/packages/wine.scm (wine-staging-patchset-data)[source]:
Use GIT-FETCH and GIT-FILE-NAME.
[native-inputs]: Remove unzip.
[arguments]: Adjust and refactor accordingly.
 2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice 574e2ee8ea
gnu: yubico-piv-tool: Update to 1.6.1. 
* gnu/packages/security-token.scm (yubico-piv-tool): Update to 1.6.1.
 2018-08-23 17:16:41 +02:00
Tobias Geerinckx-Rice fa5511b6e9
gnu: r-car: Update to 3.0-1. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-1.
 2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 39bb1cc77a
gnu: r-digest: Update to 0.6.16. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.16.
 2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice ed61c44895
gnu: r-dplyr: Update to 0.7.6. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.6.
 2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 51dbad04c5
gnu: r-rcpp: Update to 0.12.18. 
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.18.
 2018-08-23 17:16:40 +02:00
Tobias Geerinckx-Rice 02489a6646
gnu: duplicity: Update to 0.7.18. 
* gnu/packages/backup.scm (duplicity): Update to 0.7.18.
 2018-08-23 17:16:39 +02:00
Arun Isaac 72816ebed2
gnu: darcs: Update to 2.14.1. 
* gnu/packages/version-control.scm (darcs): Update to 2.14.1.
[arguments]: Add patch-sh phase. Enable tests.
 2018-08-23 15:51:43 +05:30
Arun Isaac d3c7e70858
gnu: ghc-zlib: Update to 0.6.2. 
* gnu/packages/haskell.scm (ghc-zlib): Update to 0.6.2.
 2018-08-23 14:43:48 +05:30
Arun Isaac cdccdec1f2
gnu: ghc-quickcheck-instances: Update to 0.3.18. 
* gnu/packages/haskell-check.scm (ghc-quickcheck-instances): Update to 0.3.18.
[arguments]: Allow building with newer base-compat.
 2018-08-23 14:37:57 +05:30
Arun Isaac f797a0e987
gnu: ghc-graphviz: Update to 2999.20.0.2. 
* gnu/packages/haskell.scm (ghc-graphviz): Update to 2999.20.0.2.
[native-inputs]: Add ghc-hspec, graphviz and hspec-discover.
 2018-08-23 13:21:23 +05:30