9b7df80b9b
gnu: r-rcppeigen: Update to 0.3.3.5.0.
...
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.5.0.
2019-01-12 23:35:13 +01:00
bcc17f7f11
gnu: r-rrcov: Update to 1.4-7.
...
* gnu/packages/statistics.scm (r-rrcov): Update to 1.4-7.
2019-01-12 23:35:13 +01:00
70ee5ab137
gnu: r-cowplot: Update to 0.9.4.
...
* gnu/packages/statistics.scm (r-cowplot): Update to 0.9.4.
2019-01-12 23:35:13 +01:00
7213ef07c6
gnu: r-rann: Update to 2.6.1.
...
* gnu/packages/statistics.scm (r-rann): Update to 2.6.1.
2019-01-12 23:35:13 +01:00
2c8594d963
gnu: r-sfsmisc: Update to 1.1-3.
...
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-3.
2019-01-12 23:35:13 +01:00
54ebdf6f74
gnu: r-rmarkdown: Update to 1.11.
...
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.11.
[propagated-inputs]: Remove r-rprojroot.
2019-01-12 23:35:13 +01:00
fb45934202
gnu: r-rstudioapi: Update to 0.9.0.
...
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.9.0.
2019-01-12 23:35:13 +01:00
8f49d99a84
gnu: r-git2r: Update to 0.24.0.
...
* gnu/packages/statistics.scm (r-git2r): Update to 0.24.0.
2019-01-12 23:35:13 +01:00
c12e429348
gnu: r-httr: Update to 1.4.0.
...
* gnu/packages/statistics.scm (r-httr): Update to 1.4.0.
2019-01-12 23:35:13 +01:00
02c89c5812
gnu: r-commonmark: Update to 1.7.
...
* gnu/packages/statistics.scm (r-commonmark): Update to 1.7.
2019-01-12 23:35:12 +01:00
fe8c44502b
gnu: r-checkmate: Update to 1.9.0.
...
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.0.
2019-01-12 23:35:12 +01:00
ca4861c602
gnu: r-backports: Update to 1.1.3.
...
* gnu/packages/statistics.scm (r-backports): Update to 1.1.3.
2019-01-12 23:35:12 +01:00
23347dc353
gnu: r-dbplyr: Update to 1.3.0.
...
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.3.0.
2019-01-12 23:35:12 +01:00
f12ed3664d
gnu: r-tibble: Update to 2.0.0.
...
* gnu/packages/statistics.scm (r-tibble): Update to 2.0.0.
[propagated-inputs]: Add r-fansi and r-pkgconfig.
2019-01-12 23:35:12 +01:00
c668a95861
gnu: r-rlang: Update to 0.3.1.
...
* gnu/packages/statistics.scm (r-rlang): Update to 0.3.1.
2019-01-12 23:35:12 +01:00
495866a9d7
gnu: r-knitr: Update to 1.21.
...
* gnu/packages/statistics.scm (r-knitr): Update to 1.21.
[propagated-inputs]: Add r-xfun.
2019-01-12 23:35:12 +01:00
bf3aded0cf
gnu: r-markdown: Update to 0.9.
...
* gnu/packages/statistics.scm (r-markdown): Update to 0.9.
2019-01-12 23:35:12 +01:00
eae93bd3f2
gnu: r-bh: Update to 1.69.0-1.
...
* gnu/packages/statistics.scm (r-bh): Update to 1.69.0-1.
2019-01-12 23:35:12 +01:00
b6e27673e6
gnu: r-pheatmap: Update to 1.0.12.
...
* gnu/packages/statistics.scm (r-pheatmap): Update to 1.0.12.
2019-01-12 23:35:12 +01:00
ca2bc7e037
gnu: r-mgcv: Update to 1.8-26.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-26.
2019-01-12 23:35:12 +01:00
60f1bce09f
gnu: r-codetools: Update to 0.2-16.
...
* gnu/packages/statistics.scm (r-codetools): Update to 0.2-16.
2019-01-12 23:35:12 +01:00
3dbd87f504
gnu: r-class: Update to 7.3-15.
...
* gnu/packages/statistics.scm (r-class): Update to 7.3-15.
2019-01-12 23:35:12 +01:00
35cf4874cc
gnu: r-survival: Update to 2.43-3.
...
* gnu/packages/statistics.scm (r-survival): Update to 2.43-3.
2019-01-12 23:35:12 +01:00
11a36548d9
gnu: r-argparse: Update to 2.0.0.
...
* gnu/packages/cran.scm (r-argparse): Update to 2.0.0.
[propagated-inputs]: Add r-r6; remove r-proto.
2019-01-12 23:35:12 +01:00
527c605598
gnu: r-callr: Update to 3.1.1.
...
* gnu/packages/cran.scm (r-callr): Update to 3.1.1.
[propagated-inputs]: Remove r-base64enc.
2019-01-12 23:35:12 +01:00
b140569e18
gnu: r-readxl: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-readxl): Update to 1.2.0.
[propagated-inputs]: Add r-progress.
2019-01-12 23:35:11 +01:00
0aad198e2b
gnu: r-pracma: Update to 2.2.2.
...
* gnu/packages/maths.scm (r-pracma): Update to 2.2.2.
2019-01-12 23:35:11 +01:00
44c69a536e
gnu: r-rcpparmadillo: Update to 0.9.200.5.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.5.0.
2019-01-12 23:35:11 +01:00
0e87bf0177
gnu: r-processx: Update to 3.2.1.
...
* gnu/packages/cran.scm (r-processx): Update to 3.2.1.
[propagated-inputs]: Remove r-assertthat, r-crayon, and r-testthat.
2019-01-12 23:35:11 +01:00
2766d3436a
gnu: r-sjlabelled: Update to 1.0.16.
...
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.0.16.
[propagated-inputs]: Remove r-tibble and r-tidyselect.
2019-01-12 23:35:11 +01:00
813d9c51e3
gnu: r-broom: Update to 0.5.1.
...
* gnu/packages/cran.scm (r-broom): Update to 0.5.1.
[propagated-inputs]: Add r-generics.
2019-01-12 23:35:11 +01:00
25c67ecfc6
gnu: Add r-generics.
...
* gnu/packages/cran.scm (r-generics): New variable.
2019-01-12 23:35:11 +01:00
646e1ef059
gnu: r-curl: Update to 3.3.
...
* gnu/packages/cran.scm (r-curl): Update to 3.3.
[inputs]: Add zlib.
[native-inputs]: Add pkg-config.
2019-01-12 23:35:11 +01:00
ef91530362
gnu: r-readr: Update to 1.3.1.
...
* gnu/packages/statistics.scm (r-readr): Update to 1.3.1.
[propagated-inputs]: Add r-clipr and r-crayon.
2019-01-12 23:35:11 +01:00
48102ce123
gnu: r-mvabund: Update to 4.0.1.
...
* gnu/packages/cran.scm (r-mvabund): Update to 4.0.1.
2019-01-12 23:35:11 +01:00
04a18a81ae
gnu: r-writexl: Update to 1.1.
...
* gnu/packages/cran.scm (r-writexl): Update to 1.1.
2019-01-12 23:35:11 +01:00
a2315c6702
gnu: r-jsonlite: Update to 1.6.
...
* gnu/packages/cran.scm (r-jsonlite): Update to 1.6.
2019-01-12 23:35:11 +01:00
ea600ff709
gnu: python-pillow: Update homepage.
...
* gnu/packages/python.scm (python-pillow)[homepage]: Update URL.
2019-01-12 16:39:26 -05:00
acbf312573
gnu: python-pillow: Update to 5.4.0
...
* gnu/packages/python.scm (python-pillow): Update to 5.4.0.
[arguments]: Add 'patch-ldconfig' phase.
2019-01-12 16:38:36 -05:00
146c6b62bf
gnu: Sort package modules in (gnu packages guile).
...
* gnu/packages/guile.scm: Sort list of gnu/packages modules.
2019-01-12 12:14:31 +01:00
7d8baff97b
gnu: impressive: Update to 0.12.0.
...
* gnu/packages/pdf.scm (impressive): Update to 0.12.0.
2019-01-12 12:14:31 +01:00
24155bf40d
gnu: Move Java compression packages to new module.
...
* gnu/packages/compression.scm (bitshuffle-for-snappy): Export variable.
(java-snappy, java-snappy-1, java-iq80-snappy, java-jbzip2, java-tukaani-xz):
Move these variables from here...
* gnu/packages/java-compression.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/java.scm, gnu/packages/bioinformatics.scm: Adjust module
references.
2019-01-12 12:14:28 +01:00
1704367719
gnu: Add Bochs.
...
* gnu/packages/virtualization.scm (bochs): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-01-11 17:09:20 -05:00
81c64748ba
gnu: Stellarium: Update to 0.18.3.
...
* gnu/packages/astronomy.scm (stellarium): Update to 0.18.3.
[arguments]: Skip a broken test.
2019-01-11 17:07:55 -05:00
1ac0c1b899
gnu: opendht: Make argon2 a propagated input so that its .pc is found.
...
* gnu/packages/networking.scm (opendht)[inputs]: Remove argon2.
[propagated-inputs]: Add it here.
2019-01-11 19:48:00 +01:00
e0fa641380
gnu: opendht: Use jsoncpp and restbed.
...
* gnu/packages/crypto.scm (opendht): Move definition to networking.scm.
* gnu/packages/networking.scm (opendht)[inputs]: Add jsoncpp and restbed.
2019-01-11 19:48:00 +01:00
362fba83dd
gnu: Add restbed.
...
* gnu/packages/networking.scm (restbed): New variable.
2019-01-11 19:48:00 +01:00
50e1843b3a
gnu: libupnp: Update to 1.6.25.
...
* gnu/packages/upnp.scm (libupnp): Update to 1.6.25.
2019-01-11 19:48:00 +01:00
46b082f97f
gnu: kinit: Use KDEINIT5_LIBRARY_PATH to search for dynlibs.
...
Using LIBRARY_PATH was introduced in
16b8aff85b
2019-01-11 16:35:52 +01:00
5a26f879c3
Revert "gnu: emacs-ghub: Update to 3.2.0."
...
This change should be applied once we update our magit package.
This reverts commit b96f0e6ff9
2019-01-11 13:32:31 +01:00
88d7101798
gnu: Add emacs-general.
...
[[PGP Signed Part:Good signature from 31BC8105F659D425 Gabriel Hondet <gabrielhondet@gmail.com> (trust undefined) created at 2019-01-06T10:42:43+0100 using RSA]]
* gnu/packages/emacs.scm (emacs-general): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-11 12:14:38 +01:00
84a2de36a1
services: Deprecate a few more service procedures.
...
These procedures were already either undocumented (and de facto
deprecated) or documented as deprecated or redundant.
* gnu/services/base.scm (guix-service, guix-publish-service): Mark as
deprecated.
* gnu/services/mcron.scm (mcron-service): Likewise.
* gnu/services/networking.scm (tor-service): Likewise.
* doc/guix.texi (Scheduled Job Execution): Remove 'mcron-service' and
adjust example.
(Networking Services): Remove 'tor-service'.
* gnu/tests/base.scm (%mcron-os): Use 'mcron-service-type' instead of
'mcron-service'.
* gnu/tests/networking.scm (%tor-os): Use 'tor-service-type' instead of
'tor-service'.
* tests/guix-system.sh: Likewise.
2019-01-11 12:14:38 +01:00
babfd9447d
tests: Nitpick on Docker test.
...
This is a followup to 7d8a4eeacc
2019-01-11 12:14:37 +01:00
cb2ad4f508
gnu: wine-staging: Hard-code vulkan loader.
...
* gnu/packages/wine.scm (wine-staging-patchset-data): Fix indentation.
* gnu/packages/wine.scm (wine-staging)[arguments]: Add 'wrap-executable phase.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Add 'wrap-executable
phase. Copy the real wine-preloader instead of the wrapped version.
2019-01-11 11:15:13 +01:00
e7c6bc45ed
gnu: jamm: Remove broken "build" phase.
...
* gnu/packages/bioinformatics.scm (jamm)[arguments]: Remove "build" phase.
2019-01-11 06:08:43 +01:00
9757b57f4e
services: docker: Update comment.
...
* gnu/services/docker.scm (docker-shepherd-service): Update comment.
2019-01-11 02:53:28 +01:00
adf0b482eb
gnu: gexiv2: Update to 0.10.10.
...
* gnu/packages/gnome.scm (gexiv2): Update to 0.10.10.
2019-01-10 18:45:41 -05:00
d4d9a1ece0
gnu: Update texlive packages.
...
* guix/build-system/texlive.scm (%texlive-tag, %texlive-revision): Update to
texlive-2018.2, revision 49435.
* gnu/packages/tex.scm (texlive-dvips, texlive-generic-unicode-data,
texlive-generic-dehyph-exptl, texlive-generic-hyph-utf8, texlive-fontname,
texlive-fonts-cm, texlive-tex-plain, texlive-latex-base,
texlive-latex-graphics, texlive-latex-graphics, texlive-latex-oberdiek,
texlive-latex-tools, texlive-latex-l3kernel, texlive-latex-l3packages,
texlive-latex-fontspec, texlive-latex-amsmath, texlive-latex-amscls,
texlive-latex-babel, texlive-latex-cyrillic, texlive-latex-eqparbox,
texlive-latex-ifplatform, texlive-latex-etoolbox, texlive-latex-galois,
texlive-latex-polyglossia, texlive-tex-texinfo, texlive-latex-changebar,
texlive-latex-fancyhdr, texlive-latex-overpic, texlive-latex-parskip,
texlive-metapost, texlive-latex-ucs, texlive-generic-pdftex,
texlive-latex-media9, texlive-latex-ocgx2, texlive-latex-koma-script,
texlive-generic-listofitems, texlive-bibtex, texlive-context-base): Update
hashes.
(texlive-latex-fontspec)[arguments]: Remove custom build target.
(texlive-latex-dinbrief)[arguments]: Add build phase "fix-encoding-error".
(texlive-latex-xkeyval): New variable.
(texlive-latex-pstool)[source]: Fetch from new location.
[build-system]: Use trivial-build-system.
[arguments]: Write simple builder.
[propagated-inputs]: Add texlive-latex-l3kernel, texlive-latex-tools, and
texlive-latex-xkeyval.
[synopsis]: Fix typo.
2019-01-10 22:43:09 +01:00
c954fe6622
gnu: irssi: Update to 1.1.2 [fixes CVE-2019-5882].
...
* gnu/packages/irc.scm (irssi): Update to 1.1.2.
2019-01-10 16:05:42 -05:00
ffcd282702
gnu: docker: Booby-trap "Command" and "LookPath" calls.
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* gnu/packages/docker.scm (docker)[arguments]<#:phases>[patch-paths]:
Booby-trap "Command" and "LookPath" calls.
2019-01-10 21:29:53 +01:00
6a6e5d84da
gnu: opendht: Update to 1.8.1.
...
* gnu/packages/crypto.scm (opendht): Update to 1.8.1.
[source]: Remove snippet that deletes argon2, which is no longer bundled.
[arguments]: Add "--with-argon2" to use system argon2.
[license]: Update to GPLv3+ following the README and source headers.
2019-01-10 21:09:06 +01:00
6fe6840dab
gnu: Add libsecp256k1.
...
* gnu/packages/crypto.scm (libsecp256k1): New variable.
2019-01-10 21:09:06 +01:00
35ac66eec1
gnu: crypto++: Update to 8.0.0.
...
* gnu/packages/crypto.scm (crypto++): Update to 8.0.0.
[arguments]: Build shared library.
[arguments]: Generate .pc file.
2019-01-10 21:09:06 +01:00
8b0c174415
services: docker: Use more minimal service requrements.
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* gnu/services/docker.scm (docker-service-type)[requirement]: Add
file-system-/sys/fs/cgroup/blkio, file-system-/sys/fs/cgroup/cpu,
file-system-/sys/fs/cgroup/cpuset, file-system-/sys/fs/cgroup/devices,
file-system-/sys/fs/cgroup/memory. Remove elogind.
2019-01-10 19:17:49 +01:00
d3a0e74d6a
services: docker: Clarify service-extension shepherd-root-service-type.
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* gnu/services/docker.scm (docker-service-type)[extensions]: Clarify
service-extension shepherd-root-service-type.
2019-01-10 19:17:48 +01:00
dbd346ae88
gnu: sct: Correct license.
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* gnu/packages/xdisorg.scm (sct)[license]: Change to non-copyleft.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-10 14:59:23 +01:00
65a67bf711
services: Use 'define-deprecated' for service procedures.
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* gnu/services/base.scm (urandom-seed-service, gpm-service): Define
using 'define-deprecated'.
* gnu/services/messaging.scm (bitlbee-service): Likewise.
* gnu/services/networking.scm (dhcp-client-service): Likewise.
(ntp-service): Likewise.
* gnu/services/xorg.scm (slim-service): Likewise.
(gdm-service): Likewise.
2019-01-10 14:59:23 +01:00
7d4b3e1e2b
gnu: Add pwsafe
...
* gnu/packages/password-utils.scm (pwsafe): New variable
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-10 14:59:22 +01:00
01b3625df6
services: gdm: Add default value.
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* gnu/services/xorg.scm (<gdm-configuration>)[x-server]: Add default
value.
(gdm-service-type)[default-value, description]: New fields.
(gdm-service): Mark as deprecated.
2019-01-10 14:59:22 +01:00
394207c1ee
gnu: Add missing copyright line.
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* gnu/packages/video.scm: Add missing copyright line for commit 20b4aa6
2019-01-10 08:59:44 +01:00
1d591432c7
gnu: wlstream: Fix indentation.
...
* gnu/packages/video.scm (wlstream): Fix indentation.
2019-01-10 08:53:36 +01:00
20b4aa6bab
gnu: Add wlstream.
...
* gnu/packages/video.scm (wlstream): New variable.
2019-01-10 08:41:03 +01:00
1f61cc102e
gnu: ffmpeg: Add libdrm support.
...
* gnu/packages/video.scm (ffmpeg): Add libdrm support.
2019-01-10 08:20:39 +01:00
6b6a25d4d2
gnu: docker: Fix more paths.
...
* gnu/packages/docker.scm (docker)[inputs]: Add dbus, git.
[arguments]<#:phases>[patch-paths]: Use them.
2019-01-10 05:40:53 +01:00
f946a370ed
services: docker: Depend on elogind.
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* gnu/services/docker.scm (docker-shepherd-service)[requirement]: Add elogind.
2019-01-10 05:15:42 +01:00
dc4b4a38fa
tests: docker: Fix test.
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* gnu/tests/docker.scm (run-docker-test): Set memory and disk size.
(%docker-os): Add elogind service.
2019-01-10 05:15:41 +01:00
60893e5c84
gnu: linux-libre: Update to 4.20.1.
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* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.1.
(%linux-libre-hash): Update hash.
2019-01-09 23:00:07 -05:00
f7ed0b1db5
gnu: linux-libre@4.19: Update to 4.19.14.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.14.
(%linux-libre-4.19-hash): Update hash.
2019-01-09 23:00:05 -05:00
166c6ad39c
gnu: linux-libre@4.14: Update to 4.14.92.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.92.
(%linux-libre-4.14-hash): Update hash.
2019-01-09 23:00:03 -05:00
c37f52e3be
gnu: linux-libre@4.9: Update to 4.9.149.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.149.
2019-01-09 23:00:00 -05:00
28f6b27543
gnu: linux-libre: Enable pressure stall information.
...
* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Enable CONFIG_PSI.
2019-01-09 22:59:58 -05:00
8cd958608c
gnu: docker: Disable tests requiring elevated permissions.
...
* gnu/packages/docker.scm (docker)[arguments]<#:phases>[delete-failing-tests]:
Disable tests requiring elevated permissions.
2019-01-10 04:46:29 +01:00
8b487bf84f
gnu: containerd: Fix more paths.
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* gnu/packages/docker.scm (containerd)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:34:57 +01:00
58adcaa19f
gnu: docker: Fix more paths.
...
* gnu/packages/docker.scm (docker)[inputs]: Add util-linux.
[arguments]<#:phases>[patch-paths]: Fix more paths.
2019-01-10 04:33:47 +01:00
f0bfd0fc21
services: docker: Specify log file for containerd.
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* gnu/services/docker.scm (containerd-shepherd-service): Specify log file
for containerd.
2019-01-10 03:54:28 +01:00
7d8a4eeacc
tests: Add Docker system test.
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* gnu/tests/docker.scm: New file.
2019-01-10 03:44:20 +01:00
65a7e35cb5
gnu: docker: Substitute LookPath of literals generally.
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* gnu/packages/docker.scm (docker)[arguments]<#:phases>[patch-paths]:
Substitute LookPath of literals generally.
2019-01-10 03:12:32 +01:00
e9b316453e
gnu: Add docker-cli.
...
* gnu/packages/docker.scm (docker-cli): New variable.
2019-01-10 03:01:12 +01:00
8af4c335e3
services: Add docker.
...
* gnu/services/docker.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document the service.
2019-01-10 03:00:55 +01:00
f87ea24a82
gnu: Add docker.
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* gnu/packages/docker.scm (docker): New variable.
* gnu/packages/patches/docker-engine-test-noinstall.patch: New file.
* gnu/packages/patches/docker-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-01-10 02:49:14 +01:00
fc51c28ae8
gnu: Blender: Update to a beta release of 2.80.
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Fixes <https://bugs.gnu.org/33608 > and <https://bugs.gnu.org/33882 >.
* gnu/packages/graphics.scm (blender): Update to 2.80-beta-0.3c3d80e.
[source]: Fetch from the Git repository.
[inputs]: Use OpenJPEG 2. Add Numpy.
[arguments]: Specify the location of Numpy. Remove some configure flags that are
no longer used. Comment out the 'fix-broken-import' phase because the
file it patches doesn't exist in the Git sources.
[description]: Add a warning about the beta status.
2019-01-09 18:54:16 -05:00
b96f0e6ff9
gnu: emacs-ghub: Update to 3.2.0.
...
* gnu/packages/emacs.scm (emacs-ghub): Update to 3.2.0.
[source]: Use 'git-fetch'.
[propagated-inputs]: Add emacs-dash, emacs-graphql,
emacs-let-alist, emacs-treepy.
2019-01-09 22:40:32 +01:00
9bc7dd62b4
gnu: emacs-magit-popup: Update to 2.12.5.
...
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.5.
2019-01-09 22:40:25 +01:00
8d59ef68cb
gnu: emacs-with-editor: Update to 2.8.0.
...
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.8.0.
[source]: Use 'git-fetch'.
2019-01-09 22:40:13 +01:00
5b07f06804
gnu: Add emacs-graphql.
...
* gnu/packages/emacs.scm (emacs-graphql): New variable.
2019-01-09 22:40:02 +01:00
abb8dff054
gnu: Add emacs-treepy.
...
* gnu/packages/emacs.scm (emacs-treepy): New variable.
2019-01-09 22:38:22 +01:00
56c50c71b5
gnu: emacs-emacsql: Update to 3.0.0.
...
* gnu/packages/emacs.scm (emacs-emacsql): Update to 3.0.0.
[source]: Use 'git-fetch'.
[arguments]: Remove unnecessary fix.
2019-01-09 22:38:06 +01:00
d4e915f9b5
gnu: emacs-closql: Update to 1.0.0.
...
* gnu/packages/emacs.scm (emacs-closql): Update to 1.0.0.
[source]: Use 'git-fetch'.
2019-01-09 22:37:52 +01:00
817e09c174
gnu: Django: Update to 1.11.18 [fixes CVE-2019-3498].
...
* gnu/packages/django.scm (python-django, python2-django): Update to 1.11.18.
2019-01-09 15:44:36 -05:00
e82c98abe9
gnu: aria2: Fix CVE-2019-3500.
...
* gnu/packages/patches/aria2-CVE-2019-3500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/bittorrent.scm (aria2)[source]: Use it.
2019-01-09 15:38:19 -05:00
45ee3fde87
gnu: hashcat: Update to 5.1.0.
...
* gnu/packages/password-utils.scm (hashcat): Update to 5.1.0.
2019-01-09 14:05:20 -05:00
f73b7bf6e2
gnu: fasm: Update comments.
...
* gnu/packages/assembly.scm (fasm): Update comments.
2019-01-09 19:33:28 +01:00
cb95e79f14
gnu: fasm: Fix grammatical errors in description.
...
* gnu/packages/assembly.scm (fasm)[description]: Modify.
2019-01-09 19:33:27 +01:00
1bde3d2cbf
gnu: Add dev86.
...
* gnu/packages/assembly.scm (dev86): New variable.
2019-01-09 19:33:27 +01:00
ab7aa06cac
gnu: python-pygit2: Update to 0.27.3.
...
* gnu/packages/python.scm (python-pygit2): Update to 0.27.3.
[arguments]: Add custom phase to compile with cffi support. Add custom
phase to not require specific versions of python-cffi.
[native-inputs]: Add python-pytest.
2019-01-09 20:25:50 +02:00
1b504b498a
gnu: libgit2: Update to 0.27.7.
...
* gnu/packages/version-control.scm (libgit2): Update to 0.27.7.
2019-01-09 18:47:57 +01:00
037c3b0ea2
gnu: emacs-irony-mode: Remove propagated input
...
emacs-irony-mode finds its server binary because its a propagated input and is
in the path. We can substitute the variable `irony-server-install-prefix` to
not propagate the input and keep the binary isolated from the user.
* gnu/packages/emacs.scm (emacs-irony-mode):
[propagated-inputs] Remove propagated inputs
[inputs] Add emacs-irony-mode-server
[arguments] Add phase substituting the variable of the server path
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
ecf7e4ea43
gnu: emacs-ggtags: Don't require GNU Global in path
...
emacs-ggtags relies on the GNU Global tools (global and gtags) to be available
in the path. This way it will grab some random executable if it will find
executables at all.
This is fixed by setting the prefix to GNU Global in the store. This way
emacs-ggtags will use specific deterministic executables.
* gnu/packages/emacs.scm (emacs-ggtags):
[inputs]: Add GNU Global to the inputs
[arguments]: Add a phase for substituting the right path to the executables
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
b2a5ef2e94
gnu: e2fsprogs: Update to 1.44.5.
...
* gnu/packages/linux.scm (e2fsprogs): Update to 1.44.5.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
4287bd19c7
gnu: bind: Update to 9.12.3-P1.
...
* gnu/packages/dns.scm (bind): Update to 9.12.3-P1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:57 +01:00
25a0ffbf27
gnu: emacs-md4rd: Update to c55512c.
...
* gnu/packages/emacs.scm (emacs-md4rd): Update to c55512c.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-09 18:47:56 +01:00
cba08f60a1
gnu: Add r-mcmc.
...
* gnu/packages/cran.scm (r-mcmc): New variable.
2019-01-09 17:13:52 +01:00
39274ab4d9
gnu: Add r-parcor.
...
* gnu/packages/cran.scm (r-parcor): New variable.
2019-01-09 17:13:52 +01:00
0af9616d91
gnu: Add r-huge.
...
* gnu/packages/cran.scm (r-huge): New variable.
2019-01-09 17:13:52 +01:00
879a15203b
gnu: Add r-ppls.
...
* gnu/packages/cran.scm (r-ppls): New variable.
2019-01-09 17:13:52 +01:00
17932a0f63
gnu: Add r-epi.
...
* gnu/packages/cran.scm (r-epi): New variable.
2019-01-09 17:13:52 +01:00
728012dae8
gnu: Add r-etm.
...
* gnu/packages/cran.scm (r-etm): New variable.
2019-01-09 17:13:52 +01:00
7aeec0cf37
gnu: Add r-cmprsk.
...
* gnu/packages/cran.scm (r-cmprsk): New variable.
2019-01-09 17:13:52 +01:00
e3c0e3e360
gnu: Add r-protviz.
...
* gnu/packages/cran.scm (r-protviz): New variable.
2019-01-09 17:13:52 +01:00
fe4e9f0349
gnu: Add r-rbamtools.
...
* gnu/packages/cran.scm (r-rbamtools): New variable.
2019-01-09 17:13:52 +01:00
e50722c8e6
gnu: Add r-genenet.
...
* gnu/packages/cran.scm (r-genenet): New variable.
2019-01-09 17:13:52 +01:00
6a5bfe09eb
gnu: Add r-longitudinal.
...
* gnu/packages/cran.scm (r-longitudinal): New variable.
2019-01-09 17:13:52 +01:00
1ea708af8c
gnu: Add r-survivalroc.
...
* gnu/packages/cran.scm (r-survivalroc): New variable.
2019-01-09 17:13:52 +01:00
afc0d8158b
gnu: Add r-bootstrap.
...
* gnu/packages/cran.scm (r-bootstrap): New variable.
2019-01-09 17:13:52 +01:00
4fcbd7eaf3
gnu: Add r-rmeta.
...
* gnu/packages/cran.scm (r-rmeta): New variable.
2019-01-09 17:13:52 +01:00
c2d6e866ac
gnu: Add r-drc.
...
* gnu/packages/cran.scm (r-drc): New variable.
2019-01-09 17:13:52 +01:00
99c164a5c7
gnu: Add r-spatialextremes.
...
* gnu/packages/cran.scm (r-spatialextremes): New variable.
2019-01-09 17:13:52 +01:00
32725458b7
gnu: Add r-fields.
...
* gnu/packages/cran.scm (r-fields): New variable.
2019-01-09 17:13:52 +01:00
90104ecd66
gnu: Add r-spam.
...
* gnu/packages/cran.scm (r-spam): New variable.
2019-01-09 17:13:51 +01:00
f51dcc275e
gnu: Add r-dotcall64.
...
* gnu/packages/cran.scm (r-dotcall64): New variable.
2019-01-09 17:13:49 +01:00
658b2b62cb
gnu: Add r-assertive.
...
* gnu/packages/cran.scm (r-assertive): New variable.
2019-01-09 15:43:51 +01:00
39231abf4d
gnu: Add r-assertive-data.
...
* gnu/packages/cran.scm (r-assertive-data): New variable.
2019-01-09 15:43:51 +01:00
39ef8e097b
gnu: Add r-assertive-data-uk.
...
* gnu/packages/cran.scm (r-assertive-data-uk): New variable.
2019-01-09 15:43:51 +01:00
6d3702e5ce
gnu: Add r-assertive-data-us.
...
* gnu/packages/cran.scm (r-assertive-data-us): New variable.
2019-01-09 15:43:51 +01:00
66d0a0a706
gnu: Add r-assertive-strings.
...
* gnu/packages/cran.scm (r-assertive-strings): New variable.
2019-01-09 15:43:51 +01:00
29d9a2affb
gnu: Add r-assertive-datetimes.
...
* gnu/packages/cran.scm (r-assertive-datetimes): New variable.
2019-01-09 15:43:51 +01:00
50ce8b1e2c
gnu: Add r-assertive-code.
...
* gnu/packages/cran.scm (r-assertive-code): New variable.
2019-01-09 15:43:51 +01:00
1f0a761a14
gnu: Add r-assertive-files.
...
* gnu/packages/cran.scm (r-assertive-files): New variable.
2019-01-09 15:43:51 +01:00
5e3bd35506
gnu: Add r-assertive-types.
...
* gnu/packages/cran.scm (r-assertive-types): New variable.
2019-01-09 15:43:51 +01:00
dcafcfb4fd
gnu: Add r-assertive-reflection.
...
* gnu/packages/cran.scm (r-assertive-reflection): New variable.
2019-01-09 15:43:51 +01:00
c358b5d418
gnu: Add r-assertive-models.
...
* gnu/packages/cran.scm (r-assertive-models): New variable.
2019-01-09 15:43:51 +01:00
905aa46ae5
gnu: Add r-assertive-matrices.
...
* gnu/packages/cran.scm (r-assertive-matrices): New variable.
2019-01-09 15:43:50 +01:00
2da2d2f605
gnu: Add r-assertive-sets.
...
* gnu/packages/cran.scm (r-assertive-sets): New variable.
2019-01-09 15:43:50 +01:00
dac9c1f604
gnu: Add r-assertive-numbers.
...
* gnu/packages/cran.scm (r-assertive-numbers): New variable.
2019-01-09 15:43:50 +01:00
4b2d17edaa
gnu: Add r-assertive-properties.
...
* gnu/packages/cran.scm (r-assertive-properties): New variable.
2019-01-09 15:43:50 +01:00
8004bb2451
gnu: Add r-assertive-base.
...
* gnu/packages/cran.scm (r-assertive-base): New variable.
2019-01-09 15:43:50 +01:00
a536c7c9ad
gnu: Add r-rmpfr.
...
* gnu/packages/cran.scm (r-rmpfr): New variable.
2019-01-09 15:43:50 +01:00
1ab5160434
gnu: Add r-gmp.
...
* gnu/packages/cran.scm (r-gmp): New variable.
2019-01-09 15:43:50 +01:00
dfd09f7bad
gnu: Add r-bigrquery.
...
* gnu/packages/cran.scm (r-bigrquery): New variable.
2019-01-09 15:43:50 +01:00
ad6fea1690
gnu: Add r-ontologyindex.
...
* gnu/packages/cran.scm (r-ontologyindex): New variable.
2019-01-09 15:43:50 +01:00
9170eb7f1f
gnu: Add r-rapidjsonr.
...
* gnu/packages/cran.scm (r-rapidjsonr): New variable.
2019-01-09 15:43:50 +01:00
e7176ac5bd
gnu: Add r-pixmap.
...
* gnu/packages/cran.scm (r-pixmap): New variable.
2019-01-09 15:43:50 +01:00
895efece37
gnu: Add r-strucchange.
...
* gnu/packages/cran.scm (r-strucchange): New variable.
2019-01-09 15:43:50 +01:00
d28be7b76b
gnu: Add r-als.
...
* gnu/packages/cran.scm (r-als): New variable.
2019-01-09 15:43:50 +01:00
9401f56b81
gnu: Add r-chemometricswithr.
...
* gnu/packages/cran.scm (r-chemometricswithr): New variable.
2019-01-09 15:43:50 +01:00
25861356ed
gnu: Add r-iso.
...
* gnu/packages/cran.scm (r-iso): New variable.
2019-01-09 15:43:50 +01:00
00436e2cac
gnu: Add r-nnls.
...
* gnu/packages/cran.scm (r-nnls): New variable.
2019-01-09 15:43:50 +01:00
2871b670a8
gnu: Add r-kohonen.
...
* gnu/packages/cran.scm (r-kohonen): New variable.
2019-01-09 15:43:50 +01:00
d0eb09a134
gnu: Add r-grimport.
...
* gnu/packages/cran.scm (r-grimport): New variable.
2019-01-09 15:43:49 +01:00
7eec973e81
gnu: Add r-tractor-base.
...
* gnu/packages/cran.scm (r-tractor-base): New variable.
2019-01-09 15:43:49 +01:00
b98662c53a
gnu: Add r-reportr.
...
* gnu/packages/cran.scm (r-reportr): New variable.
2019-01-09 15:43:49 +01:00
cb03d6c6f3
gnu: Add r-ore.
...
* gnu/packages/cran.scm (r-ore): New variable.
2019-01-09 15:43:49 +01:00
6e09f50613
gnu: Add r-shades.
...
* gnu/packages/cran.scm (r-shades): New variable.
2019-01-09 15:43:49 +01:00
f79e63a571
gnu: Add r-rnifti.
...
* gnu/packages/cran.scm (r-rnifti): New variable.
2019-01-09 15:43:49 +01:00
b2e777b27c
gnu: Add r-tfmpvalue.
...
* gnu/packages/cran.scm (r-tfmpvalue): New variable.
2019-01-09 15:43:49 +01:00
adcd0cc87e
gnu: Add r-splitstackshape.
...
* gnu/packages/cran.scm (r-splitstackshape): New variable.
2019-01-09 15:43:49 +01:00
5f0fbfc0ad
gnu: Add r-lassopv.
...
* gnu/packages/cran.scm (r-lassopv): New variable.
2019-01-09 15:43:49 +01:00
3d62d98e69
gnu: Add r-flare.
...
* gnu/packages/cran.scm (r-flare): New variable.
2019-01-09 15:43:49 +01:00
029425cbce
gnu: Add r-vbsr.
...
* gnu/packages/cran.scm (r-vbsr): New variable.
2019-01-09 15:43:49 +01:00
5574cb812a
gnu: Add r-rpostgresql.
...
* gnu/packages/cran.scm (r-rpostgresql): New variable.
2019-01-09 15:43:49 +01:00
3088b3fc5b
gnu: Add r-rspectra.
...
* gnu/packages/cran.scm (r-rspectra): New variable.
2019-01-09 15:43:45 +01:00
0991fd5336
build: Require Guile 2.2.
...
* configure.ac: Require Guile 2.2.
* README: Adjust accordingly.
* doc/guix.texi (Requirements): Likewise.
* gnu/packages/package-management.scm (guile2.0-guix): Deprecate.
(guix-minimal): Inherit from GUIX, not from GUILE2.0-GUIX.
2019-01-09 14:47:53 +01:00
fefcb122ac
gnu: dvdisaster: Run regression tests.
...
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Remove #:tests? argument.
Add 'check' phase.
2019-01-08 09:09:31 -06:00
98b0ec7fa6
gnu: dvdisaster: Install desktop file.
...
* gnu/packages/cdrom.scm (dvdisaster)[arguments]: Add 'install-desktop phase.
2019-01-08 09:09:25 -06:00
627e6d8c11
gnu: prosody: Update to 0.11.1.
...
* gnu/packages/messaging.scm (prosody): Update to 0.11.1.
[arguments]: Replace "Makefile" with "GNUmakefile". Change "5.1" to "5.2".
Explain why there are no tests.
[inputs]: Replace lua-5.1, lua5.1-bitop, lua5.1-expat, lua5.1-socket,
lua5.1-filesystem, lua5.1-sec with lua-5.2, lua5.2-bitop, lua5.2-expat,
lua5.2-socket, lua5.2-filesystem, lua5.2-sec.
2019-01-08 15:23:36 +01:00
eb5b6c5777
gnu: Add lua5.2-sec.
...
* gnu/packages/lua.scm (lua5.2-sec): New variable.
(make-lua-sec): New procedure.
(lua5.1-sec, lua5.2-sec): Call it.
2019-01-08 15:23:36 +01:00
d994325747
gnu: Add lua-filesystem and lua5.2-filesystem.
...
* gnu/packages/lua.scm (lua-filesystem, lua5.2-filesystem): New variables.
(make-lua-filesystem): New procedure.
(lua-filesystem, lua5.1-filesystem, lua5.2-filesystem): Call it.
2019-01-08 15:23:36 +01:00
253aab77c5
gnu: Add lua5.2-socket.
...
* gnu/packages/lua.scm (lua5.2-socket): New variable.
(make-lua-socket): New procedure.
(lua5.1-socket, lua5.2-socket): Call it.
2019-01-08 15:23:36 +01:00
7c97a0631e
gnu: Add lua5.2-expat.
...
* gnu/packages/lua.scm (lua5.2-expat): New variable.
(make-lua-expat): New procedure.
(lua5.1-expat, lua5.2-expat): Call it.
2019-01-08 15:23:36 +01:00
580f33e119
gnu: criu: Update to 3.11.
...
* gnu/packages/virtualization.scm (criu): Update to 3.11.
[arguments]: Add custom phase to patch python calls.
2019-01-08 12:29:42 +02:00
49fe965d28
gnu: criu: Fix building on armhf-linux.
...
* gnu/packages/virtualization.scm (criu)[arguments]: Hardcode the arm
version in the Makefile.
2019-01-08 12:29:40 +02:00
b509381089
gnu: gajim-omemo: Update to 2.6.26.
...
* gnu/packages/messaging.scm (gajim-omemo): Update to 2.6.26.
2019-01-08 10:19:55 +01:00
5cfec72f39
gnu: gajim: Update to 1.1.1.
...
* gnu/packages/messaging.scm (gajim): Update to 1.1.1.
[arguments]: Replace #:test-target with a 'check' phase.
2019-01-08 10:19:55 +01:00
eac5d425cd
gnu: tor: Update to 0.3.4.10.
...
* gnu/packages/tor.scm (tor): Update to 0.3.4.10.
2019-01-08 04:21:53 +01:00
be4f8391a4
gnu: privoxy: Update to 3.0.28.
...
* gnu/packages/tor.scm (privoxy): Update to 3.0.28.
2019-01-08 04:21:52 +01:00
3c85058c0e
gnu: libnet: Update to 1.2-rc3.
...
* gnu/packages/networking.scm (libnet): Update to 1.2-rc3.
[source]: Use git-fetch.
2019-01-07 22:07:01 +01:00
8737666a99
gnu: ocaml-graph: Add upstream-name.
...
* gnu/packages/ocaml.scm (ocaml-graph)[properties]: Add upstream-name.
2019-01-07 22:05:47 +01:00
33af92dd99
gnu: Move coq packages from ocaml to coq.
...
* gnu/packages/ocaml.scm (coq, proof-general, coq-flocq, coq-gappa, coq-mathcomp)
(coq-coquelicot, coq-bignums, coq-interval): Move from here...
* gnu/packages/coq.scm: ... to here. New file.
2019-01-07 22:05:37 +01:00
912f0541a3
gnu: emacs-guix: Update to 0.5.1.1.
...
* gnu/packages/emacs.scm (emacs-guix): Update to 0.5.1.1.
2019-01-07 22:52:46 +03:00
40c7476af8
gnu: containerd: Update synopsis.
...
* gnu/packages/docker.scm (containerd)[synopsis]: Modify.
2019-01-07 19:13:04 +01:00
54891e850a
gnu: containerd: Enable tests.
...
* gnu/packages/docker.scm (containerd)[arguments]: Remove #:tests?.
2019-01-07 19:12:14 +01:00
1f1e338ad4
gnu: Add missing use-module clause.
...
This is a follow-up to 4e5b8f7215
2019-01-07 18:45:23 +01:00
d53b23176f
gnu: Add r-corpcor.
...
* gnu/packages/cran.scm (r-corpcor): New variable.
2019-01-07 18:44:04 +01:00
e3bb076678
gnu: Add r-ddrtree.
...
* gnu/packages/cran.scm (r-ddrtree): New variable.
2019-01-07 18:44:04 +01:00
9f33d76c33
gnu: Add r-qlcmatrix.
...
* gnu/packages/cran.scm (r-qlcmatrix): New variable.
2019-01-07 18:44:04 +01:00
58bc8857fb
gnu: Add r-combinat.
...
* gnu/packages/cran.scm (r-combinat): New variable.
2019-01-07 18:44:04 +01:00
13f5837b4c
gnu: Add r-densityclust.
...
* gnu/packages/cran.scm (r-densityclust): New variable.
2019-01-07 18:44:04 +01:00
b614009e6a
gnu: Add r-sparsesvd.
...
* gnu/packages/cran.scm (r-sparsesvd): New variable.
2019-01-07 18:44:04 +01:00
fbebccf7f6
gnu: Add r-docopt.
...
* gnu/packages/cran.scm (r-docopt): New variable.
2019-01-07 18:44:04 +01:00
45b469a472
gnu: Add r-rvcheck.
...
* gnu/packages/cran.scm (r-rvcheck): New variable.
2019-01-07 18:44:04 +01:00
61d7334906
gnu: Add r-tidytree.
...
* gnu/packages/cran.scm (r-tidytree): New variable.
2019-01-07 18:44:04 +01:00
a6e4413d64
gnu: Add r-colorramps.
...
* gnu/packages/cran.scm (r-colorramps): New variable.
2019-01-07 18:44:04 +01:00
e37935e457
gnu: Add r-wordcloud.
...
* gnu/packages/cran.scm (r-wordcloud): New variable.
2019-01-07 18:44:04 +01:00
f3949fecb3
gnu: Add r-waveslim.
...
* gnu/packages/cran.scm (r-waveslim): New variable.
2019-01-07 18:44:04 +01:00
db084d79ea
gnu: Add r-tiff.
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* gnu/packages/cran.scm (r-tiff): New variable.
2019-01-07 18:44:04 +01:00
44b0c5b5b1
gnu: Add r-fftwtools.
...
* gnu/packages/cran.scm (r-fftwtools): New variable.
2019-01-07 18:44:03 +01:00
71601a5d92
gnu: Add r-softimpute.
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* gnu/packages/cran.scm (r-softimpute): New variable.
2019-01-07 18:44:03 +01:00
03a3ec5e18
gnu: Add r-adgoftest.
...
* gnu/packages/cran.scm (r-adgoftest): New variable.
2019-01-07 18:44:03 +01:00
a50abb3614
gnu: Add r-gsl.
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* gnu/packages/cran.scm (r-gsl): New variable.
2019-01-07 18:44:03 +01:00
ced51a204e
gnu: Add r-stabledist.
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* gnu/packages/cran.scm (r-stabledist): New variable.
2019-01-07 18:44:03 +01:00
dcd1aa2e64
gnu: perl-lingua-translit: Update to 0.28.
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* gnu/packages/perl.scm (perl-lingua-translit): Update to 0.28.
2019-01-07 19:42:41 +02:00
4e5b8f7215
gnu: Add containerd.
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* gnu/packages/docker.scm (containerd): New variable.
2019-01-07 16:41:17 +01:00
7f2d67c826
gnu: Add dummy linker for arm-elf.
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* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for arm-elf.
2019-01-07 16:39:35 +01:00
2a2760a08f
gnu: Move R packages from geo.scm to cran.scm.
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* gnu/packages/geo.scm (r-maps, r-mapproj, r-rgooglemaps, r-geosphere,
r-ggmap): Move from here...
* gnu/packages/cran.scm: ...to here.
2019-01-07 15:55:06 +01:00
576e74eee8
gnu: emacs-ess: Move to (gnu packages statistics).
...
* gnu/packages/emacs.scm (emacs-ess): Move from here...
* gnu/packages/statistics.scm (emacs-ess): ...to here.
2019-01-07 15:55:06 +01:00
61f2587db9
gnu: python-rpy2: Move to (gnu packages statistics).
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* gnu/packages/python.scm (python-rpy2): Move from here...
* gnu/packages/statistics.scm (python-rpy2): ...to here.
2019-01-07 15:55:06 +01:00
e0d3f4bf1a
gnu: Remove reference to (gnu packages statistics).
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* gnu/packages/web.scm: Remove obsolete use-module clause.
2019-01-07 15:55:06 +01:00
d9bec9a87b
gnu: r-rmysql: Move from databases.scm to cran.scm
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* gnu/packages/databases.scm (r-rmysql): Move from here...
* gnu/packages/cran.scm (r-rmysql): ...to here.
2019-01-07 15:55:06 +01:00
41a010875b
gnu: biber: Update to 2.12.
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* gnu/packages/tex.scm (biber): Update to 2.12.
[source]: Use 'git-fetch'. Add patch.
[inputs]: Add perl-file-slurper. Remove perl-file-slurp.
* gnu/packages/patches/biber-fix-encoding-write.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-01-07 15:40:58 +01:00
60a166c629
gnu: r-feather: Move from serialization.scm to cran.scm.
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* gnu/packages/serialization.scm (r-feather): Move from here...
* gnu/packages/cran.scm (r-feather): ...to here.
2019-01-07 15:21:09 +01:00
67eebb19b7
gnu: Fix top-level circular references between emacs.scm and llvm.scm.
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Previously, loading either of these two modules could fail somewhat
non-deterministically because each top-level was referencing a variable
defined by the other module's top-level.
* gnu/packages/emacs.scm (package-elisp-from-package): Move to...
* gnu/packages/llvm.scm (package-elisp-from-package): Here. Keep
private.
2019-01-07 15:09:30 +01:00
37e461e6f4
gnu: perl-file-slurper: Update to 0.012.
...
* gnu/packages/perl.scm (perl-file-slurper): Update to 0.012.
[native-inputs]: Add perl-test-warnings.
2019-01-07 15:08:08 +01:00
92ce188331
gnu: Move R packages from web.scm to cran.scm.
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* gnu/packages/web.scm (r-httpuv, r-jsonlite, r-servr, r-htmltools,
r-htmlwidgets, r-htmltable, r-curl, r-hwriter, r-rjson, r-shiny,
r-shinydashboard, r-shinyfiles, r-crosstalk, r-rook, r-miniui): Move these
from here...
* gnu/packages/cran.scm: ...to here.
2019-01-07 15:05:27 +01:00
3a3d4d9d54
Revert "gnu: Use package-elisp-from-package for clangs emacs lisp files"
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This reverts commit 5bc2e14add
2019-01-07 14:58:40 +01:00
6fd2ed23ac
gnu: mantis: Limit to x86_64-linux.
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* gnu/packages/bioinformatics.scm (mantis)[supported-systems]: New field.
2019-01-07 15:47:34 +02:00
e97b23e4bd
gnu: package-elisp-from-package: Clarify docstring.
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* gnu/packages/emacs.scm (package-elisp-from-package)[docstring]: Clarify.
2019-01-07 14:45:21 +01:00
5bc2e14add
gnu: Use package-elisp-from-package for clangs emacs lisp files
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Use package-elisp-from-package for emacs-clang-format and emacs-clang-rename.
Also remove package-from-clang-elisp-file as it is not needed anymore.
* gnu/packages/llvm.scm (emacs-clang-format): Use package-elisp-from-package
* gnu/packages/llvm.scm (emacs-clang-rename): Use package-elisp-from-package
* gnu/packages/llvm.scm (package-from-clang-elisp-file): Remove function
2019-01-07 14:45:21 +01:00
7d5856bd45
gnu: Add package-elisp-from-package
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Add a function to generate package definitions that packages single elisp
files from other packages.
* gnu/packages/emacs.scm (package-elisp-from-package): New function
2019-01-07 14:45:21 +01:00
915c6bf60c
gnu: python2-fastlmm: Move to machine-learning.scm.
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This is a step towards removing OCaml modules from the closure
of (gnu packages python).
* gnu/packages/python.scm (python2-fastlmm): Move to...
* gnu/packages/machine-learning.scm (python2-fastlmm): ... here.
2019-01-07 14:41:01 +01:00
6fd5a80dbe
gnu: Remove unnecessary build-side module imports.
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* gnu/packages/batik.scm, gnu/packages/boost.scm,
gnu/packages/calendar.scm, gnu/packages/gl.scm,
gnu/packages/lua.scm, gnu/packages/qt.scm, gnu/packages/simulation.scm,
gnu/packages/terminals.scm: Remove unnecessary import of (guix build
utils).
* gnu/packages/emacs.scm: Remove unnecessary imports of (guix ...).
* gnu/packages/libcanberra.scm: Use (srfi srfi-1) instead of (guix build
utils) for 'alist-delete'.
* gnu/packages/wxwidgets.scm: Likewise.
2019-01-07 14:41:00 +01:00
db1eb632be
gnu: Move Emacs modes for Dedukti to ocaml.scm.
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This removes OCaml-related modules from the closure of (gnu packages
emacs).
* gnu/packages/emacs.scm (emacs-dedukti-mode, emacs-flycheck-dedukti):
Move to ...
* gnu/packages/ocaml.scm: ... here.
2019-01-07 14:41:00 +01:00
59a075047d
gnu: Move OCaml packages away from maths.scm.
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This removes (gnu packages ocaml) and related build system modules from
the closure of (gnu packages maths).
* gnu/packages/maths.scm (ocaml-gsl, ocaml4.01-gsl, cubicle): Move to...
* gnu/packages/ocaml.scm: ... here.
2019-01-07 14:41:00 +01:00
3b451546ed
gnu: Add rmlint.
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* gnu/packages/disk.scm (rmlint): New variable.
2019-01-07 14:32:44 +01:00
e0aa5b5bbf
gnu: Add prosody-http-upload.
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* gnu/packages/messaging.scm (prosody-http-upload): New variable.
2019-01-07 14:15:57 +01:00
e942813aac
gnu: Add mantis.
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* gnu/packages/bioinformatics.scm (mantis): New variable.
2019-01-07 11:56:18 +01:00
ad6f13308b
gnu: Add sdsl-lite.
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* gnu/packages/datastructures.scm (sdsl-lite): New variable.
2019-01-07 11:56:14 +01:00
c71bbfcca9
gnu: autoconf-archive: Update to 2019.01.06.
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* gnu/packages/autotools.scm (autoconf-archive): Update to 2019.01.06.
2019-01-07 11:19:06 +02:00
4d674b4143
gnu: Add jose.
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* gnu/packages/jose.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-01-07 10:15:37 +02:00
bd86a1bede
gnu: Add slurp.
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* gnu/packages/image.scm (slurp): New variable.
2019-01-07 08:31:14 +01:00
c824dedf71
gnu: libarchive: Replace with libarchive 3.3.3 and fix CVE-2018-{1000877,1000878,1000880}.
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* gnu/packages/backup.scm (libarchive)[source, home-page]: Use HTTPS.
[replacement]: New field.
(libarchive-3.3.3): New variable.
* gnu/packages/patches/libarchive-CVE-2018-1000877.patch,
gnu/packages/patches/libarchive-CVE-2018-1000878.patch,
gnu/packages/patches/libarchive-CVE-2018-1000880.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2019-01-07 05:42:34 +08:00
b7ec276e57
gnu: Add kitty.
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* gnu/packages/terminals.scm (kitty): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-06 21:41:07 +01:00
b5f8c2c885
hydra: Compute jobs in an inferior.
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Previously we would rely on auto-compilation of all the Guix modules.
The complete evaluation would take ~15mn on berlin.guixsd.org and
require lots of RAM. This approach should be faster since potentially
only part of the modules are rebuilt. Furthermore, as a side-effect, it
builds the derivations that 'guix pull' uses.
* build-aux/hydra/gnu-system.scm: Remove 'eval-when' form.
(hydra-jobs): New procedure.
* gnu/ci.scm (package->alist, qemu-jobs, system-test-jobs)
(tarball-jobs): Return strings for the 'license' field.
* guix/self.scm (compiled-guix)[*cli-modules*]: Add (gnu ci).
2019-01-06 21:41:07 +01:00
59fb5c1cdb
hydra: Move job definitions to (gnu ci).
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* build-aux/hydra/gnu-system.scm: Move code to...
* gnu/ci.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-01-06 21:41:07 +01:00
0f763db448
gnu: gama: Update to 2.02.
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* gnu/packages/gps.scm (gama): Update to 2.02.
2019-01-06 15:42:06 +02:00
644353d80d
gnu: moe: Update to 1.10.
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* gnu/packages/moe.scm (moe): Update to 1.10.
[license]: Fix license, gpl2+.
2019-01-06 15:42:06 +02:00
c007e35d24
gnu: recutils: Update to 1.8.
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* gnu/packages/databases.scm (recutils): Update to 1.8.
[source]: Remove snippet.
[arguments]: Remove custom 'set-bash4.4-header-location phase. Enable
parallel tests.
[inputs]: Move check ...
[native-inputs]: ... to here. Add pkg-config.
2019-01-06 15:42:06 +02:00
30e06c2cee
gnu: unrtf: Update to 0.21.10.
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* gnu/packages/unrtf.scm (unrtf): Update to 0.21.10.
[source]: Remove patch, remove snippet.
[license]: Update to gpl3+.
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-06 15:42:05 +02:00
c65bfc658a
gnu: global: Update to 6.6.3.
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* gnu/packages/code.scm (global): Update to 6.6.3.
2019-01-06 15:42:02 +02:00
377038b8a2
gnu: emacs-evil-multiedit: Use version tag instead of commit.
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* gnu/packages/emacs.scm (emacs-evil-multiedit): Use version tag instead of commit.
2019-01-06 13:22:09 +01:00
a51ac7af7f
gnu: wine-staging: Add ffmpeg support.
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* gnu/packages/wine.scm (wine-staging)[inputs]: Add ffmpeg.
2019-01-06 10:55:10 +01:00
Ricardo Wurmus