guix-devel/gnu/packages
Ricardo Wurmus 6a45fd9aea
gnu: r-rtracklayer: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.34.0.
2016-10-26 09:28:18 +02:00
..
bootstrap
patches gnu: mupdf: Fix CVE-2016-8674. 2016-10-25 12:50:50 -04:00
abduco.scm
abiword.scm
acct.scm
acl.scm
admin.scm gnu: wpa-supplicant: Update to 2.6. 2016-10-09 17:37:36 -04:00
adns.scm gnu: c-ares: Update to 1.12.0 [fixes CVE-2016-5180]. 2016-09-29 11:18:52 -04:00
aidc.scm
algebra.scm gnu: giac-xcas: Update to 1.2.2-95. 2016-10-22 02:20:10 -04:00
animation.scm gnu: synfig: Fix isnan error. 2016-09-23 07:45:16 +02:00
anthy.scm
apl.scm gnu: apl: Update to 1.6. 2016-08-30 08:38:59 +03:00
apr.scm
aspell.scm gnu: Add German Aspell dictionary. 2016-08-30 06:57:31 +02:00
assembly.scm
astronomy.scm gnu: gnuastro: Update to 0.2. 2016-10-08 23:55:40 +03:00
attr.scm
audacity.scm
audio.scm gnu: Add guitarix-lv2. 2016-10-23 15:47:35 +02:00
augeas.scm
autogen.scm gnu: autogen: Update to 5.18.12. 2016-10-09 09:44:40 +03:00
autotools.scm gnu: autoconf-archive: Update to 2016.09.16. 2016-09-18 18:10:10 +03:00
avahi.scm
avr.scm gnu: avr: Use the correct gcc version as native-input. 2016-08-15 14:48:21 -04:00
backup.scm gnu: borg: Install more documentation. 2016-10-19 16:00:26 -04:00
base.scm
bash.scm gnu: bash-completion: Update to 2.4. 2016-10-10 11:58:11 +03:00
bdw-gc.scm
benchmark.scm gnu: Add fio. 2016-08-14 13:05:03 -04:00
bioinformatics.scm gnu: r-rtracklayer: Update to 1.34.0. 2016-10-26 09:28:18 +02:00
bison.scm
bittorrent.scm gnu: aria2: Update to 1.28.0. 2016-10-23 07:46:49 +03:00
boost.scm gnu: boost: Add -j for build. 2016-09-22 22:34:04 -05:00
bootstrap.scm gnu: Add arm-none-eabi cross compiler. 2016-10-09 15:45:59 +02:00
busybox.scm
c.scm gnu: tcc: Disable build on MIPS. 2016-09-26 03:01:06 +02:00
calcurse.scm
calendar.scm gnu: khal: Update to 0.8.4. 2016-10-07 01:48:45 -04:00
ccache.scm gnu: ccache: Update to 3.3.2. 2016-10-08 23:26:29 +03:00
cdrom.scm gnu: abcde: Update to 2.7.2. 2016-10-15 23:22:44 +03:00
certs.scm gnu: nss-certs and nss: Update to 3.27.1. 2016-10-05 20:04:50 -04:00
check.scm gnu: cmocka: Update to 1.1.0. 2016-10-10 15:13:12 +03:00
chez.scm gnu: Add chez-fmt. 2016-10-19 08:44:11 +02:00
ci.scm gnu: hydra: Update to 20151030.1ff48da. 2016-09-14 15:43:07 -04:00
cmake.scm
code.scm gnu: global: Update to 6.5.5. 2016-10-04 16:37:59 +02:00
commencement.scm
compression.scm gnu: lrzip: Update to 0.631. 2016-10-21 05:14:32 +02:00
conkeror.scm
conky.scm
connman.scm
cook.scm
cpio.scm
cppi.scm
cross-base.scm
crypto.scm gnu: opendht: Propagate msgpack. 2016-09-28 11:45:02 +02:00
cryptsetup.scm gnu: cryptsetup: Update to 1.7.2. 2016-10-04 10:24:46 -04:00
cups.scm gnu: hplip: Update to 3.16.8. 2016-08-29 11:47:48 +02:00
curl.scm gnu: curl: Update replacement to 7.50.3 [fixes CVE-2016-7167]. 2016-09-14 14:12:04 -04:00
cyrus-sasl.scm
databases.scm gnu: mariadb: Update to 10.1.18. 2016-10-18 21:32:11 -04:00
datamash.scm
datastructures.scm
dav.scm gnu: vdirsyncer: Update to 0.13.1. 2016-10-09 16:49:27 -04:00
dc.scm
debug.scm gnu: c-reduce: Upgrade to 2.5.0. 2016-09-09 07:36:40 -05:00
dejagnu.scm gnu: dejagnu: Use 'modify-phases' syntax. 2016-10-09 08:56:10 +03:00
dico.scm gnu: dico: Update to 2.3. 2016-08-11 13:20:12 +03:00
dictionaries.scm gnu: Add ding. 2016-09-06 18:36:22 +02:00
dillo.scm
disk.scm gnu: gparted: Update to 0.27.0. 2016-10-19 19:34:17 +02:00
display-managers.scm gnu: slim: Display login message. 2016-10-20 16:47:20 -05:00
django.scm gnu: python2-django: Fix typo in native-inputs. 2016-09-22 22:42:47 +03:00
djvu.scm
dns.scm gnu: Add libasr. 2016-10-19 17:28:06 +03:00
docbook.scm
docker.scm
documentation.scm gnu: asciidoc: Use local docbook-xsl package. 2016-08-21 17:42:57 -04:00
dunst.scm
dvtm.scm
ebook.scm
ed.scm
education.scm
elf.scm gnu: elfutils: Update to 0.167. 2016-10-25 22:11:59 -04:00
elixir.scm
emacs.scm gnu: emacs-emms-player-mpv: Update to 0.0.10. 2016-10-26 09:28:07 +02:00
embedded.scm gnu: Add arm-none-eabi-toolchain variants. 2016-10-16 11:53:11 +02:00
enchant.scm
engineering.scm gnu: Add Ao. 2016-10-19 15:54:10 +02:00
enlightenment.scm gnu: efl: Update to 1.18.2. 2016-10-24 22:01:00 +03:00
entr.scm gnu: entr: Update to 3.6. 2016-08-30 15:22:30 -04:00
erlang.scm
fcitx.scm
feh.scm
figlet.scm
file.scm
finance.scm gnu: Add geierlein. 2016-10-17 10:39:21 +02:00
firmware.scm
flashing-tools.scm gnu: flashrom: Update to 0.9.9 2016-09-23 19:03:19 -04:00
flex.scm
fltk.scm
fonts.scm gnu: font-un: Update source uri. 2016-10-10 13:52:51 -04:00
fontutils.scm gnu: libuninameslist: Use 'modify-phases' syntax. 2016-10-10 12:58:14 +03:00
fpga.scm gnu: Add gtkwave. 2016-10-09 18:19:22 +03:00
freedesktop.scm gnu: Add weston. 2016-09-06 17:48:59 +02:00
freeipmi.scm gnu: freeipmi: Update to 1.5.4. 2016-10-08 23:32:19 +03:00
fribidi.scm
ftp.scm gnu: weex: Use ‘modify-phases’. 2016-10-23 16:33:04 +02:00
fvwm.scm
game-development.scm gnu: sfml: Install pkgconfig files. 2016-10-17 17:11:37 +02:00
games.scm gnu: red-eclipse: Update to 1.5.6. 2016-10-24 13:25:39 -04:00
gawk.scm
gcal.scm
gcc.scm gnu: gcj: Switch dejagnu test command. 2016-10-10 00:16:56 +03:00
gd.scm gnu: gd: Fix CVE-2016-8670. 2016-10-15 15:31:49 -04:00
gdb.scm gnu: gdb: Update to 7.12. 2016-10-09 06:47:59 +03:00
geeqie.scm
geo.scm gnu: gnome-maps: Update to 3.18.3. 2016-08-19 17:52:31 -04:00
gettext.scm
gforth.scm gnu: Add gforth. 2016-09-24 14:07:12 +08:00
ghostscript.scm gnu: ghostscript-with-x: Avoid inheriting replacement field. 2016-10-13 03:38:03 -04:00
gimp.scm gnu: gimp: Fix python plugin. 2016-08-21 08:28:42 +08:00
gkrellm.scm
gl.scm gnu: glfw: Propagate the relevant inputs. 2016-10-19 15:54:10 +02:00
glib.scm gnu: dbus-1.10.12: Fix search paths. 2016-10-15 18:13:58 -04:00
gnome.scm gnu: gnumeric: Use 'glib-or-gtk-build-system'. 2016-10-24 19:19:34 +08:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm gnu: gnucash: Update to 2.6.14. 2016-10-05 20:42:49 +03:00
gnunet.scm gnu: gnunet: Add inputs. 2016-10-03 17:43:23 -04:00
gnupg.scm gnu: Add pinentry-gnome3. 2016-10-10 00:06:15 +02:00
gnustep.scm gnu: windowmaker: Update to 0.95.7. 2016-10-23 17:52:28 -04:00
gnuzilla.scm gnu: icecat: Update to 45.3.0-gnu1-beta. Add fixes from Firefox ESR 45.4.0. 2016-10-11 12:59:26 -04:00
gobby.scm gnu: Add gobby. 2016-09-27 14:46:10 +02:00
golang.scm gnu: go-1.7: Update to 1.7.3. 2016-10-21 19:03:21 -04:00
gperf.scm
gprolog.scm
gps.scm gnu: gpsbabel: Build with gnu++11. 2016-08-22 01:49:52 +02:00
graphics.scm gnu: assimp: Update to 3.3.1. 2016-10-15 23:22:47 +03:00
graphviz.scm
groff.scm
grub.scm gnu: grub: Make dependency on mdadm explicit. 2016-10-05 15:11:08 +02:00
gsasl.scm
gstreamer.scm gnu: gst-plugins-bad: Remove unreferenced qt input. 2016-09-06 13:06:45 +03:00
gtk.scm gnu: gtk+-2: Update to 2.24.31 [fixes CVE-2013-7447]. 2016-10-25 16:33:13 -04:00
guile-wm.scm gnu: guile-wm: Add '.desktop' file. 2016-09-13 14:01:27 +02:00
guile.scm gnu: Add guile-bytestructures 2016-10-24 22:51:52 +02:00
gv.scm
gxmessage.scm
haskell.scm gnu: Add GHC 8.0.1. 2016-10-19 08:44:11 +02:00
hexedit.scm
hugs.scm
hurd.scm
ibus.scm gnu: ibus: Fix simple engine. 2016-08-25 11:09:28 +02:00
icu4c.scm
idutils.scm
image.scm gnu: jasper: Update to 1.900.13. 2016-10-23 16:32:04 +03:00
imagemagick.scm gnu: graphicsmagick: Update to 1.3.25-1-56c8cae [security fixes]. 2016-10-13 05:49:33 -04:00
indent.scm
inklingreader.scm
inkscape.scm
irc.scm gnu: weechat: Update to 1.6. 2016-10-23 17:10:22 -04:00
iso-codes.scm
java.scm gnu: icedtea-8: Hardcode dynamically loaded libraries. 2016-09-11 10:10:11 +08:00
jemalloc.scm
jrnl.scm
julia.scm gnu: julia: Update to 0.5.0. 2016-10-01 21:36:36 +02:00
kde-frameworks.scm gnu: Add kpmcore. 2016-08-30 22:38:33 +02:00
kde.scm
key-mon.scm
kodi.scm
language.scm
ld-wrapper.in
ldc.scm gnu: ldc: Fix build failure. 2016-09-13 15:24:55 -04:00
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm gnu: libftdi: Propagate the libusb input. 2016-09-26 14:30:37 -04:00
libidn.scm gnu: libidn: Replace with 1.33 [fixes CVE-2015-8948 and CVE-2016-{6261,6263}]. 2016-09-02 09:52:56 -04:00
libphidget.scm
libreoffice.scm gnu: libreoffice: Update to 5.1.5.2. 2016-09-30 01:17:24 -04:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libupnp.scm gnu: libupnp: Fix CVE-2016-6255. 2016-10-09 15:57:28 -04:00
libusb.scm
lighting.scm gnu: Add ola. 2016-09-05 10:56:57 +02:00
links.scm gnu: links: Use 'modify-phases'. 2016-09-14 22:04:50 +03:00
linux-libre-4.1-i686.conf
linux-libre-4.1-x86_64.conf
linux-libre-4.4-i686.conf
linux-libre-4.4-x86_64.conf
linux-libre-4.8-i686.conf gnu: linux-libre: Update to 4.8. 2016-10-03 22:05:51 -04:00
linux-libre-4.8-x86_64.conf gnu: linux-libre: Update to 4.8. 2016-10-03 22:05:51 -04:00
linux.scm gnu: linux-libre@4.1: Update to 4.1.35. 2016-10-24 22:53:18 -04:00
lirc.scm gnu: python-lirc: Fix file-name. 2016-08-19 17:45:05 -04:00
lisp.scm gnu: Add sbcl-stumpwm-with-slynk. 2016-10-08 21:20:36 +08:00
llvm.scm gnu: extempore: Only build on x86_64. 2016-09-21 21:47:56 +02:00
logging.scm
lout.scm
lsof.scm
lua.scm gnu: lua: Add lua-lgi. 2016-09-20 14:58:32 -04:00
lxde.scm
lxqt.scm
lynx.scm gnu: lynx: Update to 2.8.9dev.9 and fix GnuTLS support. 2016-10-09 16:58:48 -04:00
m4.scm
machine-learning.scm gnu: ghmm: Run tests after install. 2016-10-04 08:54:55 +02:00
mail.scm gnu: mutt: Update to 1.7.1. 2016-10-23 07:47:03 +03:00
make-bootstrap.scm gnu: %static-inputs: Use bash from PATH in bootstrap tar. 2016-10-19 23:20:19 +02:00
man.scm gnu: man-pages: Update to 4.08. 2016-10-10 16:00:23 +02:00
markdown.scm gnu: Add cmark. 2016-09-23 20:56:51 -04:00
marst.scm
mate.scm
maths.scm gnu: coda: Remove bundled libraries. 2016-10-25 14:56:37 +02:00
mc.scm
mcrypt.scm
messaging.scm gnu: gajim: Update to 0.16.6. 2016-10-23 17:40:50 -04:00
mg.scm
microcom.scm gnu: Add microcom 2016-09-13 21:05:13 +02:00
mit-krb5.scm gnu: mit-krb5: Replace with 1.14.3 [fixes CVE-2016-3120]. 2016-08-23 06:40:00 -04:00
moe.scm
mono.scm gnu: Add mono. 2016-08-08 14:27:13 -04:00
moreutils.scm gnu: moreutils: Add download location. 2016-08-19 10:42:29 +03:00
mp3.scm gnu: mpg321: Update to 0.3.2. 2016-10-23 05:01:02 -04:00
mpd.scm doc: "filesystem" -> "file system" 2016-09-16 18:16:13 +02:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: Add mod-utilities. 2016-10-23 15:47:35 +02:00
musl.scm gnu: musl: Fix CVE-2016-8859. 2016-10-23 18:08:17 -04:00
nano.scm gnu: nano: Update to 2.7.0. 2016-09-04 16:48:44 -04:00
ncdu.scm gnu: ncdu: Update to 1.12. 2016-10-07 14:26:12 +03:00
ncurses.scm gnu: Add perl-curses. 2016-09-07 09:06:10 +03:00
netpbm.scm
nettle.scm
networking.scm gnu: Add whois. 2016-10-24 17:40:53 +01:00
nfs.scm gnu: Add nfs-utils 2016-09-12 18:17:57 +02:00
nickle.scm gnu: Add nickle. 2016-09-23 18:54:24 -04:00
ninja.scm
node.scm gnu: node: Update to 6.8.0. 2016-10-17 11:55:49 +02:00
noweb.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm doc: "filesystem" -> "file system" 2016-09-16 18:16:13 +02:00
ocr.scm
onc-rpc.scm gnu: rpcbind: Enable warm starts 2016-09-03 18:07:04 +02:00
openbox.scm gnu: openbox: Update source location. 2016-08-10 12:11:55 +03:00
openldap.scm
openstack.scm gnu: python-git-review: Wrap it so 'git', 'ssh' and 'scp' are found. 2016-09-11 10:01:18 +03:00
orpheus.scm gnu: orpheus: Use 'modify-phases'. 2016-09-23 17:38:25 +03:00
ots.scm
owncloud.scm
package-management.scm gnu: diffoscope: Update to 61. 2016-10-17 16:39:46 -04:00
parallel.scm gnu: parallel: Update to 20160922. 2016-10-03 23:59:29 -04:00
password-utils.scm gnu: shroud: Wrap 'shroud' with 'GUILE_LOAD_COMPILED_PATH'. 2016-10-01 08:50:48 +08:00
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: mupdf: Fix CVE-2016-8674. 2016-10-25 12:50:50 -04:00
pem.scm
perl.scm gnu: perl-test-mockobject: Update to 1.20150527. 2016-10-22 02:20:15 -04:00
photo.scm gnu: libraw: Update to 0.17.2 [fixes CVE-2015-{8366,8367}]. 2016-10-14 13:24:23 -04:00
pkg-config.scm
plotutils.scm
polkit.scm gnu: polkit-qt: Use modular qt. 2016-08-18 13:11:03 +02:00
popt.scm
pretty-print.scm
protobuf.scm
psyc.scm gnu: Add libpsyc. 2016-10-23 16:32:03 +03:00
pth.scm
pulseaudio.scm gnu: pulseaudio: Update to 9.0. 2016-08-17 23:24:25 +02:00
pumpio.scm
pv.scm
python.scm gnu: Add python-flask-sqlalchemy. 2016-10-23 19:41:11 +02:00
qemu.scm gnu: qemu: Patch CVE-2016-857{6,7,8}. 2016-10-11 10:59:07 +03:00
qt.scm gnu: qt: Update to 5.6.2. 2016-10-15 23:22:33 +03:00
ragel.scm
rails.scm gnu: ruby-spring: Update to 1.7.2. 2016-08-10 15:36:33 +10:00
ratpoison.scm
rdesktop.scm
rdf.scm gnu: sord: Update to 0.14.0. 2016-08-14 16:03:42 +02:00
readline.scm
regex.scm gnu: tre: Move to (gnu packages regex). 2016-09-12 16:38:03 +03:00
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-json-pure: Fix tests. 2016-10-17 19:17:53 +10:00
rush.scm gnu: rush: Update to 1.8. 2016-10-04 16:37:59 +02:00
samba.scm gnu: ldb: Update to 1.1.27. 2016-10-08 23:26:28 +03:00
sawfish.scm
scanner.scm gnu: sane-backends: Update to 1.0.25. 2016-10-09 17:50:28 -04:00
scheme.scm gnu: gambit-c: Update to 4.8.5. 2016-10-23 14:37:36 +03:00
screen.scm gnu: reptyr: Remove mips64el support. 2016-09-22 22:42:47 +03:00
scribus.scm gnu: scribus: Update to 1.5.2. 2016-09-06 21:34:59 +03:00
scsi.scm gnu: Add sg3-utils. 2016-08-14 12:45:44 -04:00
sdcc.scm gnu: Add sdcc. 2016-09-28 12:40:12 +02:00
sdl.scm
search.scm gnu: xapian: Update to 1.4.0. 2016-10-19 17:00:51 +01:00
serialization.scm gnu: jsoncpp: Update to 1.7.7. 2016-10-15 23:22:46 +03:00
serveez.scm
shells.scm gnu: fish: Do not use the bundled PCRE2. 2016-10-04 11:26:45 +02:00
shellutils.scm gnu: Add direnv. 2016-09-14 15:47:19 +08:00
shishi.scm
skarnet.scm
skribilo.scm
slang.scm gnu: newt: Update source and home-page URLs. 2016-10-11 12:05:40 -04:00
smalltalk.scm gnu: squeak-vm: Make builds bit-reproducible. 2016-08-30 12:00:52 +02:00
speech.scm
spice.scm gnu: spice: Update to 0.12.8 [fixes CVE-2016-{0749,2150}]. 2016-08-22 13:08:38 +02:00
ssh.scm gnu: openssh: Fix CVE-2016-8858. 2016-10-19 18:02:39 -04:00
stalonetray.scm
statistics.scm gnu: Add r-kernsmooth. 2016-10-26 09:28:07 +02:00
suckless.scm gnu: slock: Fix CVE-2016-6866. 2016-09-06 14:52:15 -04:00
swig.scm
sxiv.scm
synergy.scm gnu: synergy: Upgrade to 1.8.2. 2016-08-23 00:01:08 -05:00
task-management.scm
tbb.scm gnu: tbb: Update to 2017_20160916. 2016-10-08 00:03:24 +02:00
tcl.scm
telephony.scm gnu: telephony: Add 'license:' prefix. 2016-09-28 11:25:34 +02:00
terminals.scm gnu: picocom: Update to 2.2. 2016-10-15 23:22:46 +03:00
tex.scm gnu: Add teximpatient. 2016-09-06 18:36:29 +02:00
texinfo.scm gnu: texinfo: Add 6.3. 2016-09-11 23:44:24 +02:00
textutils.scm gnu: utf8proc: Update to 2.0.2. 2016-10-01 21:36:35 +02:00
time.scm
tls.scm gnu: certbot, python-acme: Update to 0.9.3. 2016-10-16 09:26:36 -04:00
tmux.scm gnu: tmux: Update to 2.3. 2016-09-30 19:49:08 -04:00
tor.scm gnu: torsocks: Update to 2.2.0. 2016-10-18 23:45:06 +01:00
tv.scm
u-boot.scm gnu: u-boot-vexpress_ca9x4: Rename to u-boot-vexpress. 2016-09-13 19:04:43 +02:00
unrtf.scm
upnp.scm
uucp.scm
valgrind.scm
version-control.scm gnu: libgit2: Update to 0.24.2. 2016-10-15 23:22:45 +03:00
video.scm gnu: ffmpeg: Update to 3.1.5. 2016-10-23 07:47:03 +03:00
vim.scm gnu: Add vim-full. 2016-10-23 07:47:02 +03:00
vpn.scm gnu: openconnect: Update to 7.07. 2016-10-23 16:33:04 +02:00
vtk.scm
w3m.scm
wdiff.scm
web.scm gnu: Add python-feedparser. 2016-10-09 13:09:50 +03:00
webkit.scm git: webkitgtk: Update to 2.14.1. 2016-10-13 06:36:05 -04:00
wget.scm
wicd.scm
wine.scm
wm.scm gnu: Add quickswitch-i3. 2016-10-01 10:56:11 +08:00
wordnet.scm gnu: wordnet: Make sure the self-reference is visible to the GC. 2016-10-05 18:35:55 +02:00
wv.scm
wxwidgets.scm
xdisorg.scm gnu: rofi: Update to 1.2.0. 2016-08-31 15:12:29 -04:00
xfce.scm
xfig.scm
xiph.scm
xml.scm gnu: expat: Fix regression caused by fix for CVE-2016-0718. 2016-09-27 13:49:49 -04:00
xnee.scm
xorg.scm gnu: libxvmc: Fix CVE-2016-7953. 2016-10-05 17:37:23 -04:00
yubico.scm
zile.scm gnu: zile: Use 'modify-phases' syntax. 2016-10-19 17:10:17 +03:00
zip.scm gnu: zip: Use 'modify-phases'. 2016-09-28 00:20:30 +02:00