Ricardo Wurmus 763e98103a gnu: Add r-annotationfilter. ... * gnu/packages/bioinformatics.scm (r-annotationfilter): New variable.		2017-11-07 23:32:42 +01:00
..
aux-files	…
bootstrap	…
patches	gnu: gcc-4.7: Resurrect building with gcc-5.4.0.	2017-11-07 22:03:51 +01:00
abduco.scm	…
abiword.scm	…
accessibility.scm	…
acct.scm	…
acl.scm	…
admin.scm	gnu: nnn: Update to 1.5.	2017-11-06 23:07:19 +02:00
adns.scm	…
aidc.scm	…
algebra.scm	gnu: giac-xcas: Update to 1.4.9-17.	2017-10-29 10:06:44 +01:00
android.scm	…
animation.scm	gnu: Add papagayo.	2017-10-24 07:54:43 +02:00
anthy.scm	…
apl.scm	gnu: apl: Update to 1.7.	2017-03-18 21:28:20 +02:00
apr.scm	gnu: apr-util: Update to 1.6.1 [fixes CVE-2017-12618].	2017-10-30 21:46:18 -04:00
aspell.scm	gnu: Add Catalan dictionary for Aspell.	2017-10-27 11:57:47 -07:00
assembly.scm	…
astronomy.scm	…
attr.scm	…
audio.scm	gnu: faust-2: Update to 2.1.0.	2017-10-22 21:25:28 +02:00
augeas.scm	…
autogen.scm	…
autotools.scm	…
avahi.scm	…
avr.scm	…
axoloti.scm	gnu: axoloti-runtime: Update home page.	2017-10-17 17:32:20 +02:00
backup.scm	gnu: borg: Update to 1.1.2.	2017-11-05 20:36:05 -05:00
base.scm	gnu: glibc: Fix CVE-2017-15670, CVE-2017-15671.	2017-10-22 23:13:09 +02:00
bash.scm	…
bdw-gc.scm	…
benchmark.scm	gnu: fio: Update to 3.2.	2017-11-05 16:16:51 +01:00
bioinformatics.scm	gnu: Add r-annotationfilter.	2017-11-07 23:32:42 +01:00
bison.scm	…
bittorrent.scm	gnu: aria2: Update to 1.33.0.	2017-11-06 06:18:31 +02:00
boost.scm	…
bootloaders.scm	gnu: u-boot: Only install 'MLO' output if it exists.	2017-11-06 22:54:28 +02:00
bootstrap.scm	…
build-tools.scm	gnu: meson: Update to 0.43.0.	2017-10-13 22:47:33 +02:00
busybox.scm	…
c.scm	…
calcurse.scm	gnu: Fix Leo Famulari's copyright statement in (gnu packages calcurse).	2017-10-25 14:45:43 -04:00
calendar.scm	…
ccache.scm	…
cdrom.scm	…
certs.scm	…
check.scm	gnu: cppcheck: Update to 1.81.	2017-10-20 02:16:51 +02:00
chez.scm	…
ci.scm	…
cinnamon.scm	gnu: Add cinnamon-desktop.	2017-10-15 20:29:31 +01:00
cmake.scm	…
cobol.scm	…
code.scm	…
commencement.scm	gnu: gcc: Add unversioned 'gcc-toolchain' variable.	2017-10-27 12:35:49 -07:00
compression.scm	gnu: Add perl-archive-extract.	2017-10-24 18:38:31 +02:00
compton.scm	…
conkeror.scm	gnu: conkeror: Update to 1.1.0.	2017-10-29 11:21:12 +01:00
conky.scm	…
connman.scm	…
cook.scm	…
cpio.scm	…
cpp.scm	…
cppi.scm	…
cran.scm	gnu: Add r-stringdist.	2017-11-07 08:15:27 +01:00
cross-base.scm	…
crypto.scm	gnu: Add python2-roca-detect.	2017-10-25 22:26:15 -07:00
cryptsetup.scm	…
cups.scm	gnu: hplip: Update to 3.17.10.	2017-10-18 23:25:04 +02:00
curl.scm	gnu: curl: Update replacement to 7.56.1 [fixes CVE-2017-1000257].	2017-10-24 08:09:47 +02:00
cyrus-sasl.scm	…
databases.scm	gnu: Add r-rmysql.	2017-11-07 08:15:43 +01:00
datamash.scm	…
datastructures.scm	…
dav.scm	…
dc.scm	…
debug.scm	…
dejagnu.scm	gnu: dejagnu: Update to 1.6.1.	2017-11-02 13:12:15 +02:00
dico.scm	…
dictionaries.scm	…
direct-connect.scm	…
disk.scm	…
display-managers.scm	gnu: sddm: Fix FTBFS after Qt paths change.	2017-10-22 13:22:59 +02:00
django.scm	gnu: python-pytest-django: Use python-pytest@3.	2017-10-23 14:49:30 +02:00
djvu.scm	…
dns.scm	gnu: knot: Update to 2.6.1.	2017-11-02 21:10:18 +01:00
docbook.scm	…
docker.scm	…
documentation.scm	…
dunst.scm	…
dvtm.scm	…
ebook.scm	gnu: calibre: Install mimetypes.	2017-11-05 17:24:01 +01:00
ed.scm	…
education.scm	…
electronics.scm	…
elf.scm	…
elixir.scm	…
emacs.scm	gnu: emacs-undo-tree: Parameterize source uri.	2017-11-06 06:18:26 +02:00
embedded.scm	gnu: Add python2-libmpsse.	2017-10-23 19:11:19 +02:00
enchant.scm	…
engineering.scm	gnu: kicad: Build with ngspice support.	2017-10-27 13:03:39 -07:00
enlightenment.scm	gnu: enlightenment: Update to 0.22.0.	2017-11-02 23:05:11 +02:00
entr.scm	…
erlang.scm	gnu: Fix the hashes of mutated GitHub archives.	2017-10-20 22:55:51 +02:00
fabric-management.scm	…
fcitx.scm	…
figlet.scm	…
file-systems.scm	gnu: add disorderfs.	2017-11-05 17:50:48 +01:00
file.scm	…
finance.scm	gnu: electrum: Update to 3.0.	2017-11-07 00:12:10 +01:00
firmware.scm	…
flashing-tools.scm	…
flex.scm	…
fltk.scm	…
fonts.scm	gnu: Fix the hashes of mutated GitHub archives.	2017-10-20 22:55:51 +02:00
fontutils.scm	gnu: libuninameslist: Update to 20170807.	2017-11-06 23:07:13 +02:00
forth.scm	…
fpga.scm	…
freedesktop.scm	gnu: weston: Update to 3.0.0.	2017-11-05 17:24:00 +01:00
freeipmi.scm	…
fribidi.scm	…
ftp.scm	gnu: libfilezilla: Update to 0.11.1.	2017-11-01 01:02:04 +01:00
fvwm.scm	…
game-development.scm	gnu: python-sge-pygame: Update source URL.	2017-10-19 18:01:37 -04:00
games.scm	gnu: retroarch: Enable Wayland support.	2017-11-05 17:24:00 +01:00
gawk.scm	…
gcal.scm	…
gcc.scm	gnu: gcc-4.7: Resurrect building with gcc-5.4.0.	2017-11-07 22:03:51 +01:00
gd.scm	…
gdb.scm	…
geo.scm	gnu: gnome-maps: Update to 3.26.2.	2017-11-02 14:42:58 -04:00
gettext.scm	…
ghostscript.scm	…
gimp.scm	…
gkrellm.scm	…
gl.scm	gnu: mesa: Disable svga driver for armhf.	2017-10-14 10:22:41 +02:00
glib.scm	Revert "gnu: itstool: Update to 2.0.4."	2017-11-02 23:00:23 +01:00
gnome.scm	gnu: gdm: Add configure flags for better defaults.	2017-11-07 18:09:13 +01:00
gnu-doc.scm	…
gnu-pw-mgr.scm	…
gnucash.scm	gnu: Add GnuCash documentation.	2017-10-13 01:05:54 -07:00
gnunet.scm	gnu: gnurl: Update to 7.56.1.	2017-10-24 17:19:15 -04:00
gnupg.scm	gnu: gnupg: Update to 2.2.2.	2017-11-07 19:34:29 +02:00
gnustep.scm	…
gnuzilla.scm	gnu: icecat: Add more fixes from upstream mozilla-esr52.	2017-10-29 15:29:18 -04:00
gobby.scm	…
golang.scm	gnu: go: Update to 1.9.2.	2017-10-26 12:14:33 -04:00
gperf.scm	…
gprolog.scm	…
gps.scm	…
graph.scm	gnu: r-rgraphviz: Update to 2.22.0.	2017-11-07 08:15:27 +01:00
graphics.scm	gnu: Fix the hashes of mutated GitHub archives.	2017-10-20 22:55:51 +02:00
graphviz.scm	gnu: Add python-pydot.	2017-11-07 21:03:15 +01:00
groff.scm	…
gsasl.scm	…
gstreamer.scm	gnu: Add ffmpeg@3.3 and use it on packages that fail with 3.4.	2017-10-27 00:01:53 +02:00
gtk.scm	gnu: ganv-devel: Update to 1.5.4-12f7d6b04.	2017-10-22 12:13:36 +02:00
guile-wm.scm	…
guile.scm	gnu: guile-git: Update snapshot.	2017-11-07 00:12:11 +01:00
gv.scm	…
gxmessage.scm	…
ham-radio.scm	…
haskell.scm	gnu: Add ghc-aws.	2017-10-22 15:32:19 -07:00
hexedit.scm	…
hugs.scm	…
hurd.scm	gnu: Use 'modify-phases' syntax.	2017-09-20 20:58:04 -04:00
ibus.scm	…
icu4c.scm	gnu: icu4c: Fix CVE-2017-14952.	2017-10-24 13:10:35 -04:00
idris.scm	…
idutils.scm	…
image-processing.scm	…
image-viewers.scm	gnu: feh: Update to 2.22.2.	2017-11-07 22:16:27 +01:00
image.scm	gnu: exiv2: Add upstream security fixes.	2017-10-27 00:50:09 +02:00
imagemagick.scm	gnu: imagemagick: Update to 6.9.9-21.	2017-11-01 21:26:50 +01:00
indent.scm	…
inklingreader.scm	…
inkscape.scm	…
irc.scm	gnu: irssi: Update to 1.0.5 [security fixes].	2017-10-22 17:24:33 +02:00
iso-codes.scm	gnu: iso-codes: Update to 3.76.	2017-11-03 09:34:13 -04:00
java.scm	gnu: antlr3-3.3: Prettify build phases.	2017-11-07 12:39:50 +01:00
javascript.scm	…
jemalloc.scm	…
jrnl.scm	…
julia.scm	…
kde-frameworks.scm	gnu: prison: Move to be in alphabetical order.	2017-11-05 10:56:40 +01:00
kde.scm	gnu: libksysguard: Update to 5.11.2.	2017-11-05 10:56:39 +01:00
kerberos.scm	…
key-mon.scm	…
kodi.scm	gnu: Add kodi-cli.	2017-11-03 06:46:03 +03:00
language.scm	…
ld-wrapper.in	…
ldc.scm	…
lego.scm	…
less.scm	…
lesstif.scm	…
libbsd.scm	…
libcanberra.scm	gnu: Add python-pycanberra.	2017-10-27 08:25:55 -04:00
libdaemon.scm	…
libedit.scm	…
libevent.scm	…
libffcall.scm	…
libffi.scm	gnu: ruby-ffi: Move to libffi.scm.	2017-10-15 11:57:15 +03:00
libftdi.scm	…
libidn.scm	…
libphidget.scm	…
libreoffice.scm	…
libsigsegv.scm	…
libunistring.scm	…
libunwind.scm	…
libupnp.scm	…
libusb.scm	…
lighting.scm	gnu: ola: Update to 0.10.5.	2017-10-30 17:20:43 +01:00
linux.scm	gnu: psm: Only use as an input on supported-systems.	2017-11-07 20:41:08 +02:00
lirc.scm	…
lisp.scm	…
llvm.scm	…
logging.scm	…
lolcode.scm	…
lout.scm	…
lsof.scm	…
lua.scm	…
lxde.scm	…
lxqt.scm	gnu: lxqt-common: Remove.	2017-10-22 16:05:26 -07:00
m4.scm	…
machine-learning.scm	…
mail.scm	gnu: notmuch: Update to 0.25.2.	2017-11-07 20:01:03 +01:00
make-bootstrap.scm	…
man.scm	…
markup.scm	…
marst.scm	…
mate.scm	gnu: Order module imports in (gnu packages mate) alphabetically.	2017-10-19 01:22:18 +02:00
maths.scm	gnu: units: Add readline input.	2017-11-01 17:17:01 -05:00
mc.scm	…
mcrypt.scm	…
medical.scm	…
mes.scm	…
messaging.scm	gnu: Add ffmpeg@3.3 and use it on packages that fail with 3.4.	2017-10-27 00:01:53 +02:00
microcom.scm	…
mingw.scm	…
moe.scm	…
monitoring.scm	…
mono.scm	…
moreutils.scm	…
motti.scm	…
mp3.scm	gnu: lame: Update to 3.100.	2017-10-22 00:39:26 +02:00
mpd.scm	gnu: ncmpcpp: Update to 0.8.1.	2017-10-31 18:13:53 -04:00
mpi.scm	gnu: psm: Only use as an input on supported-systems.	2017-11-07 20:41:08 +02:00
mtools.scm	…
multiprecision.scm	…
music.scm	gnu: sorcer: Fix building on non-Intel hardware.	2017-10-26 08:37:40 +03:00
musl.scm	gnu: musl: Update to 1.1.17.	2017-10-19 17:37:25 -04:00
nano.scm	…
ncdu.scm	…
ncurses.scm	…
netpbm.scm	…
nettle.scm	…
networking.scm	gnu: quagga: Update to 1.2.2 [fix CVE-2017-16227].	2017-10-30 20:42:13 -04:00
nfs.scm	…
nickle.scm	…
nim.scm	…
ninja.scm	…
node.scm	gnu: node: Update to 8.7.0.	2017-10-26 12:57:43 +02:00
noweb.scm	…
ntp.scm	…
nutrition.scm	…
nvi.scm	…
ocaml.scm	Fix ambiguous imports.	2017-11-07 00:12:10 +01:00
ocr.scm	…
onc-rpc.scm	…
openbox.scm	…
openldap.scm	…
openstack.scm	…
orpheus.scm	…
ots.scm	…
package-management.scm	gnu: diffoscope: Update to 88.	2017-11-07 18:09:13 +01:00
parallel.scm	gnu: parallel: Update to 20171022.	2017-10-25 21:37:53 +03:00
password-utils.scm	gnu: keepassxc: Update to 2.2.1.	2017-10-22 16:55:36 +02:00
patchutils.scm	gnu: colordiff: Use HTTPS home page.	2017-10-20 02:16:54 +02:00
pciutils.scm	…
pcre.scm	…
pdf.scm	gnu: mupdf: Fix CVE-2017-{14685,14686,14687}.	2017-10-24 13:44:34 -04:00
pem.scm	…
perl-web.scm	…
perl.scm	gnu: Add perl-test-command.	2017-11-01 20:29:32 +01:00
photo.scm	…
php.scm	gnu: Update php to 7.1.11.	2017-10-28 14:19:15 +02:00
pkg-config.scm	…
plotutils.scm	…
polkit.scm	…
popt.scm	…
pretty-print.scm	…
profiling.scm	…
protobuf.scm	gnu: ola: Build with protobuf@2.	2017-10-20 19:48:33 +02:00
pth.scm	…
pulseaudio.scm	…
pumpio.scm	…
pv.scm	…
python.scm	gnu: Add python-networkx2.	2017-11-07 21:17:20 +01:00
qt.scm	gnu: qt: Set 'EffectiveSourcePaths' to 'qtbase' for submodules.	2017-10-22 19:37:35 +08:00
ragel.scm	…
rails.scm	…
ratpoison.scm	…
rdesktop.scm	…
rdf.scm	…
re2c.scm	…
readline.scm	…
regex.scm	gnu: re2: Update to 2017-11-01.	2017-11-04 00:07:39 +01:00
rrdtool.scm	…
rsync.scm	…
ruby.scm	gnu: ruby-ffi: Move to libffi.scm.	2017-10-15 11:57:15 +03:00
rush.scm	…
rust.scm	…
samba.scm	gnu: samba: Update to 4.7.1.	2017-11-04 00:07:40 +01:00
sawfish.scm	…
scanner.scm	…
scheme.scm	…
screen.scm	gnu: screen: Update to 4.6.2.	2017-10-24 21:26:19 +03:00
scribus.scm	gnu: scribus: Update to 1.5.3. Add inputs.	2017-10-29 09:09:56 +01:00
scsi.scm	…
sdcc.scm	…
sdl.scm	gnu: sdl2: Update to 2.0.7 and enable Wayland backend.	2017-11-05 18:14:19 +01:00
search.scm	…
security-token.scm	…
selinux.scm	…
serialization.scm	gnu: Fix the hashes of mutated GitHub archives.	2017-10-20 22:55:51 +02:00
serveez.scm	…
shells.scm	…
shellutils.scm	…
simh.scm	…
simulation.scm	…
skarnet.scm	…
skribilo.scm	…
slang.scm	…
smalltalk.scm	…
sml.scm	…
speech.scm	…
spice.scm	gnu: spice-gtk: Enable GObject introspection support.	2017-10-19 12:17:43 +02:00
ssh.scm	…
sssd.scm	gnu: sssd: Disable failing test.	2017-11-04 00:07:40 +01:00
stalonetray.scm	…
statistics.scm	gnu: r-tidyselect: Update to 0.2.3.	2017-11-07 08:15:44 +01:00
storage.scm	…
suckless.scm	…
swig.scm	…
sync.scm	…
syncthing.scm	gnu: syncthing: Split into two outputs.	2017-10-24 13:10:35 -04:00
syndication.scm	gnu: Add newsboat.	2017-10-29 22:02:44 +02:00
synergy.scm	gnu: synergy: Update repository URI and hash.	2017-10-26 15:45:14 -07:00
task-management.scm	…
tbb.scm	…
tcl.scm	gnu: expect: Change home-page to http://expect.sourceforge.net/.	2017-11-07 18:50:46 +03:00
telephony.scm	…
terminals.scm	gnu: Add sakura.	2017-10-31 09:41:52 -04:00
tex.scm	…
texinfo.scm	…
text-editors.scm	…
textutils.scm	gnu: Add python-editdistance.	2017-10-22 13:19:58 +02:00
time.scm	…
tls.scm	gnu: openssl@1.1: Update to 1.1.0g [fixes CVE-2017-3735, CVE-2017-2736].	2017-11-02 22:21:59 +01:00
tmux.scm	gnu: tmux: Update to 2.6.	2017-10-15 21:37:51 -04:00
tor.scm	gnu: tor: Update to 0.3.1.8.	2017-10-25 18:13:09 +02:00
tryton.scm	…
tv.scm	…
uml.scm	…
unrtf.scm	…
upnp.scm	gnu: miniupnpc: Update to 2.0.20171102.	2017-11-02 21:10:18 +01:00
uucp.scm	…
valgrind.scm	…
version-control.scm	gnu: mercurial: Update to 4.4.1.	2017-11-07 20:23:29 +01:00
video.scm	gnu: mediainfo: Change order of custom phases.	2017-11-07 19:34:25 +02:00
vim.scm	gnu: vim: Update to 8.0.1274 [fixes CVE-2017-1000382].	2017-11-07 20:21:46 +01:00
virtualization.scm	gnu: lxc: Update to 2.1.1.	2017-10-31 19:28:09 +08:00
vpn.scm	…
w3m.scm	…
wdiff.scm	…
web-browsers.scm	…
web.scm	gnu: Add websockify.	2017-11-07 21:56:42 +01:00
webkit.scm	gnu: webkitgtk: Update to 2.18.2.	2017-10-30 20:07:00 -04:00
wget.scm	gnu: wget: Update to 1.19.2 [fixes CVE-2017-13089 and CVE-2017-13090].	2017-10-26 23:45:17 +02:00
wicd.scm	…
wine.scm	gnu: wine64: Add aarch64-linux to supported-systems.	2017-11-01 10:17:18 +02:00
wm.scm	gnu: awesome: Update to 4.2.	2017-11-07 18:09:13 +01:00
wordnet.scm	…
wv.scm	…
wxwidgets.scm	…
xdisorg.scm	gnu: rofi: Update to 1.4.2.	2017-10-17 21:05:54 +02:00
xfce.scm	…
xfig.scm	…
xiph.scm	gnu: speexdsp: Fix building on aarch64-linux.	2017-10-20 16:23:48 +03:00
xml.scm	gnu: perl-xml-libxml: Update to 2.0132.	2017-10-30 17:20:07 +01:00
xnee.scm	…
xorg.scm	gnu: bdftopcf: Update to 1.1.	2017-11-07 23:29:23 +01:00
zile.scm	…