guix-devel/gnu/packages
Ricardo Wurmus 76bd16bcf6
gnu: r-org-ce-eg-db: Update to 3.7.0.
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.7.0.
2018-11-13 23:34:39 +01:00
..
aux-files gnu: linux-libre: Enable BOCHS DRM support. 2018-10-28 20:42:50 +09:00
bootstrap
patches gnu: Poppler: Fix CVE-2018-19149. 2018-11-13 11:28:23 -05:00
abduco.scm
abiword.scm
accessibility.scm
acct.scm
acl.scm
ada.scm
admin.scm
adns.scm Revert "gnu: c-ares: Update to 1.15.0." 2018-11-06 12:22:02 +02:00
agda.scm
aidc.scm
algebra.scm
android.scm
animation.scm
anthy.scm
apl.scm
apr.scm
aspell.scm
assembly.scm
astronomy.scm
attr.scm
audio.scm gnu: faust-2: Update to 2.5.23. 2018-11-11 16:19:59 +01:00
augeas.scm
authentication.scm
autogen.scm
autotools.scm
avahi.scm
avr.scm
axoloti.scm
backup.scm gnu: restic: Fix build phase. 2018-11-13 15:03:15 +03:00
base.scm
bash.scm
batik.scm
bdw-gc.scm
benchmark.scm gnu: fio: Update to 3.11. 2018-11-07 21:09:00 +01:00
bioconductor.scm gnu: Add r-destiny. 2018-11-09 17:15:31 +01:00
bioinformatics.scm gnu: r-org-ce-eg-db: Update to 3.7.0. 2018-11-13 23:34:39 +01:00
bison.scm
bittorrent.scm
boost.scm
bootloaders.scm
bootstrap.scm
build-tools.scm gnu: Add GN. 2018-10-22 23:01:18 +02:00
busybox.scm
c.scm gnu: pcc: Use INVOKE. 2018-11-08 10:08:09 +01:00
calcurse.scm gnu: calcurse: Use HTTPS URLs. 2018-10-29 20:45:57 -04:00
calendar.scm
ccache.scm
cdrom.scm
certs.scm
check.scm gnu: cppcheck: Update to 1.85. 2018-10-23 03:14:31 +02:00
chemistry.scm
chez.scm
ci.scm gnu: cuirass: Update to 0b40dca. 2018-11-07 16:06:42 +01:00
cinnamon.scm
cluster.scm
cmake.scm
cobol.scm
code.scm gnu: cloc: Update to 1.80. 2018-10-30 23:40:42 +01:00
commencement.scm
compression.scm gnu: xdelta: Remove custom bootstrap phase. 2018-11-11 12:52:46 +01:00
compton.scm
conkeror.scm
conky.scm
connman.scm
cook.scm
cpio.scm
cpp.scm
cppi.scm
cran.scm gnu: r-rcmdcheck: Update to 1.3.2. 2018-11-11 23:13:48 +01:00
cross-base.scm
crypto.scm gnu: opendht: Remove custom bootstrap phase. 2018-11-11 10:21:02 +01:00
cryptsetup.scm
cups.scm gnu: hplip: Remove bundled non-free blobs. 2018-11-07 23:16:02 +02:00
curl.scm gnu: curl: Update grafted replacement to 7.62.0 [security fixes]. 2018-10-31 13:54:20 -04:00
cyrus-sasl.scm
databases.scm gnu: PostgreSQL: Update to 10.6 [fixes CVE-2018-16850]. 2018-11-11 14:10:03 -05:00
datamash.scm
datastructures.scm gnu: Add marisa. 2018-11-10 23:33:46 +01:00
dav.scm
dc.scm
debian.scm gnu: debian-archive-keyring: Update to 2018.1. 2018-11-04 12:00:13 +02:00
debug.scm
dejagnu.scm
dico.scm
dictionaries.scm gnu: grammalecte: Update home page. 2018-10-23 09:59:16 +02:00
digest.scm
direct-connect.scm
disk.scm
display-managers.scm
django.scm
djvu.scm
dlang.scm
dns.scm gnu: dnsmasq: Update to 2.80 [security fixes]. 2018-10-26 02:30:52 +02:00
docbook.scm
docker.scm
documentation.scm
dunst.scm
dvtm.scm
ebook.scm
ed.scm
education.scm gnu: snap: Update to 4.2.2.2. 2018-10-22 15:56:38 +02:00
electronics.scm gnu: pulseview: Update to 0.4.1. 2018-10-30 23:40:42 +01:00
elf.scm
elixir.scm
emacs.scm gnu: Add emacs-ivy-rich. 2018-11-10 23:33:47 +01:00
embedded.scm gnu: openocd: Use INVOKE. 2018-11-11 11:32:12 +01:00
emulators.scm gnu: mame: Update to 0.203. 2018-11-01 09:24:52 +01:00
enchant.scm
engineering.scm
enlightenment.scm
entr.scm
erlang.scm
fabric-management.scm
fcitx.scm
figlet.scm
file-systems.scm gnu: disorderfs: Update to 0.5.5. 2018-10-30 23:40:42 +01:00
file.scm
finance.scm
firmware.scm
flashing-tools.scm
flex.scm
fltk.scm
fonts.scm
fontutils.scm
forth.scm
fpga.scm gnu: yosys: Don't use unstable tarball. 2018-10-30 23:40:43 +01:00
freedesktop.scm
freeipmi.scm
fribidi.scm
ftp.scm
fvwm.scm
game-development.scm gnu: tiled: Fetch sources from git. 2018-11-11 13:18:27 +01:00
games.scm gnu: xonotic: Add icon and category to desktop files. 2018-11-05 00:08:47 +01:00
gawk.scm
gcal.scm
gcc.scm
gd.scm
gdb.scm
geo.scm gnu: r-rgooglemaps: Update to 1.4.3. 2018-11-09 19:41:53 +01:00
gettext.scm
ghostscript.scm
gimp.scm
gkrellm.scm
gl.scm
glib.scm gnu: appstream-glib: Update to 0.7.14. 2018-10-21 17:57:00 +02:00
gnome.scm gnu: libsoup: Update to 2.64.2. 2018-11-05 23:46:37 +01:00
gnu-doc.scm
gnu-pw-mgr.scm
gnucash.scm
gnunet.scm
gnupg.scm gnu: GnuPG: Update to 2.2.11. 2018-11-06 17:26:45 -05:00
gnustep.scm gnu: wmclock: Remove custom bootstrap phase. 2018-11-10 23:42:54 +01:00
gnuzilla.scm gnu: icecat: Add more fixes from mozilla-esr60. 2018-11-10 20:29:19 -05:00
gobby.scm
golang.scm gnu: go-github-com-aarzilli-golua: Fix for go-1.11. 2018-11-12 10:31:23 +01:00
gperf.scm
gprolog.scm
gps.scm gnu: gama: Update to 2.01. 2018-10-27 04:47:18 +02:00
graph.scm gnu: r-rgraphviz: Update to 2.26.0. 2018-11-07 12:26:33 +01:00
graphics.scm
graphviz.scm
groff.scm
groovy.scm
gsasl.scm
gstreamer.scm
gtk.scm gnu: gtk-doc: Use local docbook-xsl. 2018-11-11 16:41:45 +01:00
guile-wm.scm
guile.scm gnu: guildhall: Remove custom bootstrap phase. 2018-11-11 10:38:00 +01:00
gv.scm
gxmessage.scm
ham-radio.scm
hardware.scm gnu: Add wavemon. 2018-10-24 03:58:20 +02:00
haskell-check.scm
haskell-crypto.scm
haskell-web.scm
haskell.scm
hexedit.scm
hugs.scm
hurd.scm
ibus.scm gnu: ibus-rime: Fetch sources from git. 2018-11-11 10:03:06 +01:00
icu4c.scm
idris.scm
idutils.scm
image-processing.scm
image-viewers.scm gnu: feh: Update to 2.28.1. 2018-11-05 23:46:37 +01:00
image.scm gnu: Add jp2a. 2018-10-26 21:16:13 +02:00
imagemagick.scm gnu: ImageMagick: Update to 6.9.10-14. 2018-11-14 03:09:37 +08:00
inklingreader.scm
inkscape.scm
ipfs.scm gnu: Add gx-go. 2018-10-24 14:41:44 +02:00
irc.scm
iso-codes.scm
java.scm
javascript.scm gnu: mujs: Install shared library. 2018-10-30 11:03:48 +02:00
jemalloc.scm
jrnl.scm
julia.scm gnu: julia: Update objconv input to 2018-10-07. 2018-11-01 04:32:35 +01:00
kde-frameworks.scm
kde.scm gnu: Add libkscreen. 2018-10-24 22:37:24 +08:00
kerberos.scm
key-mon.scm
kodi.scm gnu: kodi: Update to 18.0b5. 2018-11-08 12:01:24 +02:00
language.scm
ld-wrapper.in
lego.scm
less.scm
lesstif.scm
libbsd.scm
libcanberra.scm
libdaemon.scm
libedit.scm
libevent.scm
libffcall.scm
libffi.scm
libftdi.scm
libidn.scm
libphidget.scm
libreoffice.scm gnu: LibreOffice: Update to 6.1.3.2. 2018-11-06 23:13:50 -05:00
libsigsegv.scm
libunistring.scm
libunwind.scm
libusb.scm gnu: libmtp: Update to 1.1.16. 2018-11-05 23:46:38 +01:00
license.scm
lighting.scm
linux.scm gnu: inotify-tools: Remove custom bootstrap phase. 2018-11-11 12:36:35 +01:00
lirc.scm
lisp.scm gnu: sbcl-lift: Don't keep the bundled website. 2018-11-03 20:43:35 +02:00
llvm.scm gnu: faust-2: Update to 2.5.23. 2018-11-11 16:19:59 +01:00
logging.scm
lolcode.scm
lout.scm
lsof.scm
lua.scm gnu: Add lua5.1-lpeg and lua5.1-lmpack. 2018-10-26 21:17:00 +02:00
lxde.scm gnu: lxsession: Remove custom bootstrap phase. 2018-11-11 10:16:43 +01:00
lxqt.scm gnu: lxqt-build-tools: Define LXQT_DATA_DIR and LXQT_ETC_XDG_DIR. 2018-10-27 19:50:41 +08:00
m4.scm
machine-learning.scm
mail.scm gnu: mumi: Update to 0.0.0-2.bfd96ce7. 2018-11-11 20:51:51 +01:00
make-bootstrap.scm
man.scm
markup.scm
marst.scm
mate.scm
maths.scm gnu: wxmaxima: Update to 18.10.1. 2018-11-09 01:09:06 -05:00
maven.scm
mc.scm
mcrypt.scm
medical.scm
mes.scm
messaging.scm gnu: c-toxcore: Fetch sources from git. 2018-11-13 10:51:41 +01:00
microcom.scm
mingw.scm
moe.scm
monitoring.scm gnu: Add fswatch. 2018-11-05 03:01:21 +01:00
mono.scm gnu: mono: Update home page. 2018-11-05 23:46:37 +01:00
moreutils.scm
motti.scm
mp3.scm
mpd.scm gnu: MPD: Update to 0.20.23. 2018-11-01 15:30:05 -04:00
mpi.scm
mtools.scm
multiprecision.scm
music.scm gnu: schismtracker: Remove custom bootstrap phase. 2018-11-11 12:19:23 +01:00
musl.scm
nano.scm
ncdu.scm
ncurses.scm
netpbm.scm
nettle.scm
networking.scm gnu: whois: Update to 5.4.0. 2018-11-01 04:34:25 +01:00
nfs.scm
nickle.scm
nim.scm
ninja.scm
node.scm
noweb.scm
ntp.scm
nutrition.scm
nvi.scm
ocaml.scm
ocr.scm
onc-rpc.scm
openbox.scm
opencl.scm
openldap.scm
openstack.scm
orpheus.scm
ots.scm
package-management.scm gnu: guix: Update to f5a2724. 2018-11-13 15:44:25 +01:00
parallel.scm gnu: parallel: Update to 20181022. 2018-10-27 04:47:19 +02:00
password-utils.scm gnu: hashcat-utils: Update to 1.9. 2018-10-28 02:34:07 +01:00
patchutils.scm
pciutils.scm
pcre.scm
pdf.scm gnu: Poppler: Fix CVE-2018-19149. 2018-11-13 11:28:23 -05:00
pem.scm
perl-check.scm
perl-web.scm
perl.scm gnu: perl-autovivification: Update to 0.18. 2018-11-11 08:21:59 +02:00
photo.scm gnu: libgphoto2: Update to 2.5.20. 2018-11-05 23:46:38 +01:00
php.scm gnu: php: Update to 7.2.12. 2018-11-12 23:57:42 +01:00
pkg-config.scm
plotutils.scm
polkit.scm
popt.scm
pretty-print.scm gnu: highlight: Update to 3.47. 2018-11-01 04:34:25 +01:00
printers.scm
profiling.scm
protobuf.scm
pth.scm
pulseaudio.scm
pumpio.scm
pure.scm
pv.scm
python-crypto.scm gnu: python-pynacl: Update to 1.3.0. 2018-11-01 04:34:24 +01:00
python-web.scm gnu: Add python-mechanicalsoup. 2018-10-24 21:34:22 +02:00
python.scm gnu: Add python-precis-i18n. 2018-11-11 15:58:50 +01:00
qt.scm gnu: qt@4: Use invoke. 2018-10-28 09:52:46 +02:00
ragel.scm
rails.scm
ratpoison.scm
rdesktop.scm
rdf.scm gnu: lrdf: Replace bootstrap phase. 2018-11-11 11:22:22 +01:00
re2c.scm
readline.scm
regex.scm gnu: re2: Update to 2018-10-01. 2018-10-21 17:57:01 +02:00
robotics.scm
rrdtool.scm
rsync.scm
ruby.scm gnu: ruby-rack: Update to 2.0.6 [fixes CVE-2018-{16470,16471}]. 2018-11-05 16:22:11 -05:00
rush.scm
rust.scm gnu: rust: Remove binary bootstrapper. 2018-10-30 20:42:00 +01:00
samba.scm gnu: cifs-utils: Remove autoreconf phase. 2018-11-11 13:08:56 +01:00
sawfish.scm
scanner.scm
scheme.scm
screen.scm
scribus.scm
scsi.scm
sdcc.scm
sdl.scm gnu: sdl2: Update to 2.0.9. 2018-11-01 08:20:13 +01:00
search.scm gnu: xapian: Update to 1.4.9. 2018-11-05 23:46:38 +01:00
security-token.scm gnu: pcsc-lite: Update to 1.8.24. 2018-10-24 05:59:36 +02:00
selinux.scm
serialization.scm gnu: msgpack: Remove custom bootstrap phase. 2018-11-10 23:30:52 +01:00
serveez.scm
shells.scm gnu: scsh: Remove custom bootstrap phase. 2018-11-11 12:56:22 +01:00
shellutils.scm gnu: direnv: Build with Go 1.9. 2018-11-13 11:28:23 -05:00
simh.scm
simulation.scm
skarnet.scm
skribilo.scm
slang.scm gnu: slang: Use a correct location for terminfo dirs. 2018-11-07 18:39:19 +09:00
smalltalk.scm
sml.scm
speech.scm
spice.scm gnu: spice-vdagent: Fix typo in desktop file. 2018-11-13 15:26:30 -05:00
ssh.scm gnu: libssh: Fetch source over HTTPS. 2018-11-13 11:43:35 -05:00
sssd.scm
stalonetray.scm
statistics.scm gnu: r-dplyr: Update to 0.7.8. 2018-11-11 23:13:48 +01:00
stb.scm
storage.scm
suckless.scm
swig.scm
sync.scm
syncthing.scm gnu: go-gopkg.in-asn1-ber.v1: Fix tests for go-1.11. 2018-11-12 10:29:43 +01:00
syndication.scm
synergy.scm
task-management.scm
tbb.scm
tcl.scm
telephony.scm gnu: libiax2: Fetch sources from git. 2018-11-11 13:06:31 +01:00
terminals.scm gnu: terminals: Change libtsm and kmscon repositories. 2018-11-07 18:27:01 +09:00
terraform.scm gnu: terraform-docs: Update to 0.5.0. 2018-11-06 15:34:36 +01:00
tex.scm gnu: Add texlive-latex-examplep. 2018-10-21 23:06:46 +02:00
texinfo.scm
text-editors.scm
textutils.scm gnu: dotconf: Fetch sources from git. 2018-11-11 11:37:01 +01:00
time.scm
tls.scm gnu: certbot, python-acme: Update to 0.28.0. 2018-11-13 10:10:42 -05:00
tmux.scm
tor.scm gnu: privoxy: Remove custom bootstrap phase. 2018-11-11 13:10:56 +01:00
toys.scm
tryton.scm
tv.scm
uml.scm
unrtf.scm
upnp.scm
uucp.scm
valgrind.scm
version-control.scm gnu: libgit2: Work around test failures on 32-bit platforms. 2018-11-06 17:08:46 +01:00
video.scm gnu: youtube-dl: Update to 2018.11.07. 2018-11-12 22:09:12 +05:30
vim.scm gnu: vifm: Update to 0.10. 2018-11-12 12:37:00 +02:00
virtualization.scm
vpn.scm gnu: gvpe: Update to 3.1. 2018-10-27 04:47:18 +02:00
vulkan.scm
w3m.scm
wdiff.scm
web-browsers.scm
web.scm gnu: hpcguix-web: Do not re-bootstrap. 2018-11-11 12:27:01 +01:00
webkit.scm gnu: webkitgtk@2.22: Adjust to documentation output. 2018-11-11 22:47:06 +01:00
wget.scm
wicd.scm
wine.scm gnu: wine-staging: Update to 3.20. 2018-11-13 10:24:42 +01:00
wm.scm gnu: i3-wm: Update to 4.16. 2018-11-05 23:46:38 +01:00
wordnet.scm
wv.scm
wxwidgets.scm
xdisorg.scm gnu: nxbelld: Remove custom bootstrap phase. 2018-11-10 23:42:54 +01:00
xfce.scm
xfig.scm
xiph.scm gnu: icecast: Update to 2.4.4 [fixes CVE-2018-18820]. 2018-11-01 12:33:14 -04:00
xml.scm gnu: Add xmlrpc-c. 2018-11-09 11:55:08 +01:00
xnee.scm
xorg.scm gnu: Add xcb-util-errors. 2018-11-06 17:00:02 +01:00
zile.scm