Commit Graph

2879 Commits

Author SHA1 Message Date
Ludovic Courtès 96afb480f8
pack: Use 'guile2.0-json' when building with Guile 2.0.
Fixes <http://bugs.gnu.org/27005>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

Fixes a regression introduced in commit
2252f087d4.

* guix/scripts/pack.scm (docker-image)[json]: New variable.
[build]: Use it.
2017-05-20 14:39:50 +02:00
Ludovic Courtès d6bf931cb2
pack: Use 'guile2.0-json' when building with Guile 2.0.
Fixes <http://bugs.gnu.org/27005>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

Fixes a regression introduced in commit
2252f087d4.

* guix/scripts/pack.scm (docker-image)[json]: New variable.
[build]: Use it.
2017-05-20 14:30:01 +02:00
Ludovic Courtès 4ee6584cbf
modules: Add more source-less modules.
* guix/modules.scm (%source-less-modules): New variable.
(source-module-dependencies): Use it.
2017-05-20 10:17:43 +02:00
Ludovic Courtès 4a628d57fc
publish: Fix narinfo rendering for already-compressed items.
Fixes <http://bugs.gnu.org/26975>.
Reported by Mark H Weaver <mhw@netris.org>.

* guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd
argument to 'stat' and properly handle #f.
* tests/publish.scm (wait-for-file): New procedure.
("with cache"): Remove 'wait-for-file' procedure.
("with cache, uncompressed"): New test.
2017-05-20 10:17:36 +02:00
Ludovic Courtès 36c99429a3
union: Gracefully handle dangling symlinks in the input.
Fixes <http://bugs.gnu.org/26949>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

* guix/build/union.scm (file-is-directory?): Return #f when FILE does
not exist or is a dangling symlink.
(file=?): Pass #f as a second argument to 'stat'; return #f when both
ST1 or ST2 is #f.
* tests/profiles.scm (test-equalm): New macro.
("union vs. dangling symlink"): New test.
2017-05-20 10:17:14 +02:00
Maxim Cournoyer 6d1ae43dcb
profiles: Add elapsed time to manual-database hook to output message.
* guix/profiles.scm (manual-database): Add elapsed time to manual-database
hook to output message.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-05-20 10:15:47 +02:00
Ludovic Courtès 7afc2aabdf
modules: Add more source-less modules.
* guix/modules.scm (%source-less-modules): New variable.
(source-module-dependencies): Use it.
2017-05-19 10:45:12 +02:00
Ludovic Courtès ffa5e0a6d2
publish: Fix narinfo rendering for already-compressed items.
Fixes <http://bugs.gnu.org/26975>.
Reported by Mark H Weaver <mhw@netris.org>.

* guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd
argument to 'stat' and properly handle #f.
* tests/publish.scm (wait-for-file): New procedure.
("with cache"): Remove 'wait-for-file' procedure.
("with cache, uncompressed"): New test.
2017-05-18 21:35:35 +02:00
Ludovic Courtès 27c81fcb86
lint: inputs-should-be-native: Add "cmake".
Suggested by Nicolas Goaziou <mail@nicolasgoaziou.fr>.

* guix/scripts/lint.scm (check-inputs-should-be-native)[input-names]:
Add "cmake".
2017-05-18 14:22:03 +02:00
Ludovic Courtès 22ef06b801
union: Gracefully handle dangling symlinks in the input.
Fixes <http://bugs.gnu.org/26949>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

* guix/build/union.scm (file-is-directory?): Return #f when FILE does
not exist or is a dangling symlink.
(file=?): Pass #f as a second argument to 'stat'; return #f when both
ST1 or ST2 is #f.
* tests/profiles.scm (test-equalm): New macro.
("union vs. dangling symlink"): New test.
2017-05-18 11:38:48 +02:00
Maxim Cournoyer 516bfed7a3
profiles: Add elapsed time to manual-database hook to output message.
* guix/profiles.scm (manual-database): Add elapsed time to manual-database
hook to output message.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-05-16 23:10:10 +02:00
Ricardo Wurmus 17a69cf623
import cran: Check if pkg-config is needed.
* guix/import/cran.scm (needs-pkg-config?): New procedure.
(description->package): Use it.
2017-05-16 21:43:35 +02:00
Ricardo Wurmus a0f43208cb
import cran: Refactor "needs-zlib?".
* guix/import/cran.scm (tarball-files-match-pattern?): New procedure.
(needs-zlib?): Implement in terms of "tarball-files-match-pattern?".
2017-05-16 21:43:15 +02:00
Ricardo Wurmus ff8c179ab6
import cran: Export package predicates.
* guix/import/cran.scm (cran-package?, bioconductor-package?,
bioconductor-data-package?, bioconductor-experiment-package?): Export
procedures.
2017-05-16 21:42:18 +02:00
Ricardo Wurmus daaa270ecc
import cran: Add predicate for Bioconductor experiment packages.
* guix/import/cran.scm (bioconductor-experiment-package?): New variable.
2017-05-16 21:40:39 +02:00
Ricardo Wurmus c9ffa91fd3
import cran: Exclude experiment packages in predicate "bioconductor-package?".
* guix/import/cran.scm (bioconductor-package?): Exclude experiment packages,
because they cannot be updated with the default bioconductor updater.
2017-05-16 21:40:03 +02:00
Ricardo Wurmus 7c9fcb0825
import cran: Fetch DESCRIPTION files from Github mirror.
* guix/import/cran.scm (%bioconductor-svn-url): Remove variable.
(bioconductor-mirror-url): New procedure.
(fetch-description): Take a REPOSITORY symbol instead of a BASE-URL string.
(cran->guix-package): Pass REPOSITORY symbol to "fetch-description".
(latest-cran-release, latest-bioconductor-release): Adjust accordingly.
(bioconductor-package?): Update comment about SVN.
2017-05-16 21:39:06 +02:00
Andy Patterson 0383afa02a
build-system/asdf: Handle tests defined in external systems.
* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument.
[builder]: Pass it to the build system.
(package-with-build-system)[transform]: Strip it from source systems' arguments.
* guix/build/asdf-build-system.scm (check): Pass the fully qualified path to
it on to the test-system procedure.
* guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of
the often used names for it, before running the tests.  Adjust the docstring
accordingly.
2017-05-16 15:18:16 +02:00
Andy Patterson 4209c31b8f
build-system/asdf: Retain references to source files for binary outputs.
In support of long-running programs in which the users would like to be able
to jump to the source of a definition of any of the dependencies (itself
included) of the program.

* guix/build/asdf-build-system.scm (library-outputs): Move from here ...
* guix/build/lisp-utils.scm (library-outputs): ... to here.
(build-program): Accept dependency-prefixes argument, to allow the caller to
specify references which should be retained.  Default to the library's output.
(build-image): Likewise.
(generate-executable): Likewise.
* gnu/packages/lisp.scm (sbcl-stumpwm+slynk, sbcl-slynk, sbcl-stumpwm): Adjust
accordingly to the new interface.
(sbcl-stumpwm+slynk)[native-inputs]: Move to ...
[inputs]: ... here.
2017-05-16 15:18:16 +02:00
Andy Patterson b9afcb9ed4
build-system/asdf: Simplify the use of lisp-eval-program.
Accept a list of statements, each run within its own `--eval' argument. This
allows statements to use reader package namespacing after a package has been
loaded.

* guix/build/lisp-utils.scm (spread-statements): New procedure.
(lisp-invoke): Rename to ...
(lisp-invocation): ... this. Use spread-statements. Change interface to accept
list of statements instead of a single statement.
(asdf-load-all-systems): Simplify returned statements.
(compile-system): Simplify the program passed to `lisp-eval-program'.
(test-system): Likewise.
(generate-executable-for-system): Likewise. Accept the full symbol describing
the asdf operation to use.
(generate-executable): Document the change.
(build-program, build-image): Use the new interface.
2017-05-16 15:18:15 +02:00
Andy Patterson 40f56176c5
build-system/asdf: Handle unusually-named systems.
* guix/build/lisp-utils.scm (valid-char-set): New variable.
(normalize-string): New procedure.
(compiled-system): Truncate the name of a system which contains slashes.
(generate-system-definition, make-asd-file): Use `normalize-string' to alter
the names of the created system and its dependencies.
* guix/build/asdf-build-system.scm (create-asd-file): Normalize the name of
the asd file being created.
2017-05-16 15:18:15 +02:00
Andy Patterson 0186a463d0
build-system/asdf: Always pre-load the system's definition file.
* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default
`#:asd-file' argument to the build procedure, using the system's name.
* guix/build/asdf-build-system.scm (build, check): Adjust to assume that
`asd-file' will always be a string.
* guix/build/lisp-utils.scm (compile-system, system-dependencies)
(test-system): Likewise.
2017-05-16 15:18:15 +02:00
Andy Patterson 457702b1d9
build-system/asdf: Pass the system name as an argument to the builder.
* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name,
or calculate it from the package's full name.
[builder]: Pass the value along to the build procedure.
(package-with-build-system): Remove #:asd-system-name from source packages'
arguments.
* guix/build/asdf-build-system.scm: Adjust accordingly.
* guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable.
2017-05-16 15:18:15 +02:00
Andy Patterson b4c9f0c50d
build-system/asdf: Parameterize the lisp type and implementation globally.
* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type
and %lisp before invoking the build procedure. Don't pass #:lisp-type as an
argument to said procedure.
* guix/build/asdf-build-system.scm: Adjust accordingly.
(source-install-prefix): Rename to %lisp-source-install-prefix.
* guix/build/lisp-utils.scm: Adjust accordingly.
(%lisp-type): New parameter.
(bundle-install-prefix): Rename to %bundle-install-prefix.
* gnu/packages/lisp.scm: Adjust accordingly.
2017-05-16 15:18:15 +02:00
Andy Patterson 6de91ba2a1
build-system/asdf: Make #:lisp a package argument.
* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'.
(asdf-build): Change argument name to `lisp-type'.  Remove `lisp' as an
argument to the returned procedure.  Change the argument passed to build
phases to `lisp-type'.
* guix/build/asdf-build-system.scm (copy-source, build, check)
(create-asd-file, symlink-asd-files, cleanup-files, strip): Respect
`lisp-type` argument.
* gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise.
2017-05-16 15:18:15 +02:00
Andy Patterson 26a16d37ff
build-system/asdf: Keep ecl's generated archive files.
This may be necessary to produce programs or images with ecl.

* guix/build/asdf-build-system.scm (cleanup-files): Don't delete .a files.
2017-05-16 15:18:14 +02:00
Andy Patterson 0e1371be09
build-system/asdf: Don't rename inputs.
* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated
`new-inputs' procedure for inputs and native-inputs.
<rewrite>: Don't rename inputs.
<new-propagated-inputs>: Draw from package-inputs and package-native-inputs
for source packages.  Use the original package's propagated-inputs otherwise.
<new-inputs>: Convert into a function to be used to transform inputs and
native-inputs.
* gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads)
(sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists)
(sbcl-slynk-fancy-inspector): Don't prefix input names.
2017-05-16 15:18:14 +02:00
Andy Patterson 35189728cd
build-system/asdf: Use asdf to determine dependencies.
This removes the need for conventions to determine which inputs are run-time
dependencies, and also the need to specify "special" dependencies.

* guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies)
(wrap-perform-method): Remove them.
(inputs->asd-file-map, system-dependencies, generate-system-definition)
(generate-dependency-links, make-asd-file): New procedures.
(lisp-eval-program): Add an error if no lisp matches.
(compile-system): Don't use asdf's in-built asd-file generator.
2017-05-16 15:18:14 +02:00
Andy Patterson 6c76ce39ac
build-system/asdf: Make it possible to use "lib" as the build output.
* guix/build/asdf-build-system.scm (library-output): New procedure.
(copy-source, build, check, patch-asd-files, symlink-asd-files)
(cleanup-files): Use it.
(copy-files-to-output): Rework to take an output instead of an outputs and
string pair.
(install, copy-source): Use the new method.
2017-05-16 15:18:14 +02:00
Andy Patterson bc389c20a9
build-system/asdf: Rename %install-prefix to %source-install-prefix.
* guix/build/lisp-utils.scm (%install-prefix): Rename to
%source-install-prefix.
(build-install-prefix): Use it.
* guix/build/asdf-build-system.scm (source-install-prefix)
(%system-install-prefix, source-directory, copy-source): Likewise.
2017-05-16 15:18:14 +02:00
Mathieu Othacehe 5641dffb07
scripts: system: Display bootloader name in "list-generations".
* guix/scripts/system.scm (display-system-generation): Display
  bootloader name.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 3241f7ff92
scripts: system: Adapt "switch-generation" to new bootloader API.
* guix/scripts/system.scm (reinstall-grub): Rename to
  reinstall-bootloader. Read boot-device and boot-type from parameters file to
  be able to restore the correct bootloader on specified device.
  Factorize bootloader installation code by calling install-bootloader.
 (system-bootloader-name): New procedure.
 (switch-to-system-generation): Adapt.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 1229d328fb
scripts: system: Adapt "init" to new bootloader API.
* guix/scripts/system.scm (install): Pass installer a new
argument. Rename other arguments.
Call install-bootloader instead of install-grub*.
(perform-action): Adapt.
2017-05-16 14:41:02 +02:00
Mathieu Othacehe 3042c5d8bb
scripts: system: Adapt "reconfigure" to new bootloader API.
* guix/scripts/system.scm (install-grub*): Rename to install-bootloader.  Use
keys to pass arguments.  Pass a new argument, "installer-drv" which is a script
in store dealing with bootloader-specific install actions.  Also call
"install-boot-config" to install the bootloader config file.

(install-bootloader-derivation): New procedure.  It returns a derivation that
builds a file containing "install-procedure" gexp.

(perform-action): Build install-proc derivation and call install-bootloader
with the resulting file.  Stop adding GRUB to PATH as bootloaders are called in
install-proc with direct store paths.
2017-05-16 14:41:01 +02:00
Mathieu Othacehe b09a8da4a2
bootloader: Add extlinux support.
* gnu/bootloader.scm: New file.
* gnu/bootloader/extlinux.scm: New file.
* gnu/bootloader/grub.scm: New file.
* gnu/local.mk: Build new files.
* gnu/system.scm: Adapt to new bootloader api.
* gnu/scripts/system.scm: Adapt to new bootloader api.
* gnu.scm: Remove (gnu system grub) and replace by (gnu bootloader) and (gnu
bootloader grub) modules.
* gnu/system/grub.scm: Moved content to gnu/bootloader/grub.scm.
* gnu/system/vm: Replace (gnu system grub) module by (gnu bootloader).
* gnu/tests.scm: Ditto.
* gnu/tests/nfs.scm: Ditto.
2017-05-16 14:41:01 +02:00
Ludovic Courtès ce92d269fe
ui: Disable Guile deprecation warnings by default.
* guix/ui.scm (initialize-guix): Call (debug-disable 'warn-deprecated)
when "GUILE_WARN_DEPRECATED" is not set.
2017-05-16 14:31:37 +02:00
Ludovic Courtès f411124321
utils: 'compressed-file?' matches ".lzma" files.
* guix/utils.scm (compressed-file?): Add "lzma" to the list.
2017-05-15 23:55:10 +02:00
Ricardo Wurmus 095494ed6c
licenses: Add EDL 1.0.
* guix/licenses.scm (edl1.0): New variable.
2017-05-15 22:33:17 +02:00
Ludovic Courtès 1812205cf5
bournish: 'ls' adjusts the column width depending on the entries.
* guix/build/bournish.scm (display-tabulated): Remove #:columns and
  #:column-width parameters.  Add #:terminal-width and #:column-gap.
  Compute COLUMN-WIDTH and COLUMNS.
2017-05-13 16:52:11 +02:00
Ludovic Courtès c7d1b061f5
bournish: 'ls' lists directory contents.
Suggested by Ricardo Wurmus.

* guix/build/bournish.scm (ls-command-implementation): When FILE is a
directory, list its contents rather than FILE itself.
2017-05-13 16:52:11 +02:00
Mathieu Othacehe 22fc581db3
import: pypi: Robustify latest-release.
* guix/import/pypi.scm (latest-release): Check if pypi-fetch has
  failed. If so return #f, else construct the <upstream-source>.
2017-05-13 12:40:20 +02:00
Mathieu Othacehe db427602d8
import: cran: Robustify cran-package?.
* guix/import/cran.scm (package->upstream-name): Return #f if url
  start and end index could not be determined.
  (cran-package?): Check if the upstream-name can be extracted from
  given package.
* tests/cran.scm: Add "r-minimal is not a cran package" to make sure that
  r-minimal is not detected as a cran package.

This fixes a failure of guix refresh on r-minimal because no
upsteam-name can be determined from ".../R-version.tar.gz" uri.
2017-05-13 12:40:20 +02:00
Ludovic Courtès e06ca952ed
scripts: Do not create the config directory.
This fixes runs of 'guix package' and 'guix system' tests in
environments where $HOME is read-only.

* guix/ui.scm (config-directory): Add #:ensure? parameter and honor it.
* guix/scripts.scm (warn-about-old-distro): Pass #:ensure? #f to
'config-directory'.
2017-05-13 00:03:46 +02:00
Ludovic Courtès 5db5dff53d
substitute: Honor 'Cache-Control' on 404 responses.
* guix/scripts/substitute.scm (cached-narinfo): When VALUE is #f, use
the TTL that is read instead of %NARINFO-NEGATIVE-TTL.
(cached-narinfo-expiration-time): Likewise.
2017-05-11 18:05:42 +02:00
Ludovic Courtès 24b21720f7
publish: Advertise a short TTL for "baking" 404s.
* guix/scripts/publish.scm (not-found): Add #:phrase and #:ttl
parameters and honor them.
* tests/publish.scm ("with cache"): Check the 'cache-control' header on
of the 404 response.
2017-05-11 18:05:42 +02:00
Roel Janssen 5899fafbfe
graph: Add Cypher backend.
* guix/graph.scm (%cypher-backend): New variable.
* doc/guix.texi: Add documentation for the Cypher backend of 'guix graph'.
2017-05-11 16:17:49 +02:00
Ludovic Courtès bc0e6c9312
scripts: Fix singular/plural message mismatch.
* guix/scripts.scm (warn-about-old-distro): Swap singular and plural
forms in 'N_' call.
2017-05-10 23:38:04 +02:00
Ben Woodcroft c6cfec42b0
build-system: Add package-with-ocaml4.01.
* guix/build-system/ocaml.scm (default-ocaml4.01, default-ocaml4.01-findlib,
package-with-explicit-ocaml, package-with-ocaml4.01,
strip-ocaml4.01-variant): New variables.
2017-05-10 22:13:54 +02:00
Ludovic Courtès 7fd952e052
scripts: Warn about old distro.
Fixes <http://bugs.gnu.org/25852>.
Suggested by Mark H Weaver <mhw@netris.org>.

* guix/scripts.scm (%distro-age-warning): New variable.
(warn-about-old-distro): New procedure.
* guix/scripts/package.scm (process-actions): Call
'warn-about-old-distro'.
* guix/scripts/system.scm (process-action): Likewise.
2017-05-10 22:09:08 +02:00
Ludovic Courtès 30d2397f73
ui: 'string->duration' correctly handles hours.
* guix/ui.scm (string->duration): Add missing '=>' for hours.
* tests/ui.scm ("duration, 2 hours"): New test.
2017-05-10 22:05:21 +02:00
Hartmut Goebel 59135f0d7e
guix: Add java-utils.
* guix/build/java-utils.scm: New file.
* guix/build-system/ant.scm: Use it.
* Makefile.am (MODULES): Add it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-05-10 17:59:22 +02:00
Ricardo Wurmus 52a791f50f
ant-build-system: Add default "check" target.
* guix/build-system/ant.scm (ant-build): Change default test target to
"check"; add "test-dir" argument.
* guix/build/ant-build-system.scm (default-build.xml): Add "test-dir"
argument; add ant targets "compile-tests" and "check".
(configure): Add "test-dir" argument; pass it to "default-build.xml".
2017-05-10 17:59:22 +02:00
Hartmut Goebel 8df64f7384
ant-build-system: Allow specifying source directory.
* guix/build-system/ant.scm (ant-build),
guix/build/ant-build-system.scm (default-build.xml): Add parameter
source-dir.
* guix/build/ant-build-system.scm (configure): Pass source-dir on to
default-build.xml.
* doc/guix.texi (Build Systems): Document it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2017-05-10 17:59:22 +02:00
Ludovic Courtès 07a0f68fa5
pull: Build package modules without optimizations on Guile 2.2.
* guix/build/pull.scm (%default-optimizations)
(%lightweight-optimizations): New variables.
(optimization-options): New procedure.  Taken from
build-aux/compile-all.scm.
(build-guix): Pass it to 'compile-file'.
2017-05-09 18:08:24 +02:00
Ludovic Courtès 838ba73d6e
pull: Build with the matching Guile major version.
Previously, 'guix pull' would always build with Guile 2.0.
Now it builds with the Guile that matches (effective-version).

* build-aux/build-self.scm (false-if-wrong-guile)
(package-for-current-guile): New procedures.
(guile-json, guile-ssh): Use it.
(guile-for-build): New procedure.
(build): Use (effective-version) instead of the hard-coded "/2.0".
Add (guix modules) closure to #:modules argument.  Pass
\#:guile-for-build argument to 'gexp->derivation'.
* guix/build/pull.scm (depends-on-guile-ssh?, all-scheme-files): New
procedures.
(build-guix): Show the output of (version).  Use the above procedures.
Filter out files that match 'depends-on-guile-ssh?' when (ssh session)
is missing.
2017-05-09 18:08:24 +02:00
Ludovic Courtès 402e98c524
pull: Use 'with-store'.
* guix/scripts/pull.scm (guix-pull): Remove call to 'open-connection'.
Use 'with-store' instead.
2017-05-09 18:08:24 +02:00
Ludovic Courtès 4902d3c4e0
pull: Honor the standard build options.
Reported by Niall Dooley <dooleyn@gmail.com>
in <https://lists.gnu.org/archive/html/help-guix/2017-05/msg00038.html>.

* guix/scripts/pull.scm (%options): Add --dry-run and all of
%STANDARD-BUILD-OPTIONS.
(show-help): Add call to 'show-build-options-help'.
(%default-options): Add 'system', 'substitutes?', 'graft?',
'max-silent-time', and 'verbosity'.
(guix-pull)[parse-options]: Remove.
Use 'parse-command-line' instead.  Honor --dry-run.
2017-05-09 18:08:24 +02:00
Ludovic Courtès ba2260dbbc
git-download: Fix 'git-predicate' file membership.
Previously, it the predicate would return #t for "m4/ChangeLog" if
"ChangeLog" (in the top-level directory) was in FILES.  This commit
fixes the ambiguity.

* guix/git-download.scm (git-predicate): Add 'inodes' variable.  Use it
to determine file membership.
2017-05-07 18:08:11 +02:00
Ludovic Courtès 950d51c9d9
store: Use 'TCP_NODELAY' when connecting to a daemon over PF_INET.
* guix/store.scm (open-inet-socket): Add 'cond-expand' form to define
'TCP_NODELAY' when needed.  Add call to 'setsockopt' after 'connect'.
2017-05-07 00:18:36 +02:00
Leo Famulari 40d728a87d
Revert "guix: git: Add new module."
This reverts commit a70b784708.

Commit a70b784708 caused `guix pull` to fail:

ERROR: In procedure scm-error:
ERROR: no code for module (git)
2017-05-05 20:12:57 -04:00
Mathieu Othacehe a70b784708
guix: git: Add new module.
* guix/git.scm: New file.
* configure.ac: Check for (guile git).
* Makefile.am: Build guix/git.scm if (guile git) is available.
2017-05-05 19:52:38 +02:00
Danny Milosavljevic 7e3f7acbe0
scripts: Remove profile-grub-entries.
* guix/scripts/system.scm (profile-grub-entries): Delete variable.
2017-05-05 15:03:48 +02:00
Danny Milosavljevic bf8b09169c
system: grub: Use boot-parameters instead of menu-entry where possible.
* gnu/system/grub.scm (boot-parameters->menu-entry): New variable.
(grub-configuration-file): Use boot-parameters
instead of menu-entry where possible.
* guix/scripts/system.scm (profile-boot-parameters): Update docstring.
(reinstall-grub): Use profile-boot-parameters.
(perform-action): Use profile-boot-parameters.
2017-05-05 15:03:48 +02:00
Danny Milosavljevic 0315abe608
scripts: Make boot-parameters label include generation number and time.
* guix/scripts/system.scm (system->boot-parameters): Make label include
generation number and time.
2017-05-05 15:03:47 +02:00
Danny Milosavljevic 9530e73b49
system: Introduce read-boot-parameters-file.
* gnu/system.scm (read-boot-parameters): Remove export.
(read-boot-parameters-file): New variable. Export it.
* guix/scripts/system.scm (profile-boot-parameters): Use
read-boot-parameters-file.
(profile-grub-entries): Use read-boot-parameters-file.
(reinstall-grub): Use read-boot-parameters-file.
(display-system-generation): Use read-boot-parameters-file.
2017-05-05 15:03:47 +02:00
Ludovic Courtès 396d12faea
store: Use 'write-bytevector' instead of hand-coded equivalent.
* guix/store.scm (process-stderr): Use 'write-bytevector' in the
%STDERR-READ case.
2017-05-04 18:05:05 +02:00
Ludovic Courtès cd041b268e
store: Add store path computation procedures.
* guix/derivations.scm (compressed-hash, store-path)
(output-path, fixed-output-path): Move to...
* guix/store.scm: ... here.
2017-05-04 18:05:05 +02:00
Tobias Geerinckx-Rice 74067fedce
environment: Correct typo.
* guix/scripts/environment.scm (create-environment): Fix typo.
2017-05-04 12:52:23 +02:00
Ludovic Courtès 634088a565
refresh: Use (guix discovery).
* guix/scripts/refresh.scm (maybe-updater, list-updaters): Remove.
(importer-modules): New procedure.
(%updaters): Define using 'fold-module-public-variables'.  Turn into a
promise and adjust users.
2017-05-03 23:50:15 +02:00
Ludovic Courtès cd903ef787
Add (guix discovery).
* guix/discovery.scm, tests/discovery.scm: New files.
* gnu/packages.scm (scheme-files, file-name->module-name)
(scheme-modules, all-package-modules): Remove.
(fold-packages): Rewrite in terms of 'fold-module-public-variables'.
* gnu/tests.scm: Use (guix discovery).
* Makefile.am (MODULES): Add guix/discovery.scm.
(SCM_TESTS): Add tests/discovery.scm.
2017-05-03 23:50:15 +02:00
Ludovic Courtès 69daee23af
ui: Rename '_' to 'G_'.
This avoids collisions with '_' when the latter is used as a 'match'
pattern for instance.  See
<https://lists.gnu.org/archive/html/guix-devel/2017-04/msg00464.html>.

* guix/ui.scm: Rename '_' to 'G_'.
* po/guix/Makevars (XGETTEXT_OPTIONS): Adjust accordingly.
* build-aux/compile-all.scm (warnings): Remove 'format'.
* gnu/packages.scm,
gnu/services.scm,
gnu/services/shepherd.scm,
gnu/system.scm,
gnu/system/shadow.scm,
guix/gnupg.scm,
guix/http-client.scm,
guix/import/cpan.scm,
guix/import/elpa.scm,
guix/import/pypi.scm,
guix/nar.scm,
guix/scripts.scm,
guix/scripts/archive.scm,
guix/scripts/authenticate.scm,
guix/scripts/build.scm,
guix/scripts/challenge.scm,
guix/scripts/container.scm,
guix/scripts/container/exec.scm,
guix/scripts/copy.scm,
guix/scripts/download.scm,
guix/scripts/edit.scm,
guix/scripts/environment.scm,
guix/scripts/gc.scm,
guix/scripts/graph.scm,
guix/scripts/hash.scm,
guix/scripts/import.scm,
guix/scripts/import/cpan.scm,
guix/scripts/import/cran.scm,
guix/scripts/import/crate.scm,
guix/scripts/import/elpa.scm,
guix/scripts/import/gem.scm,
guix/scripts/import/gnu.scm,
guix/scripts/import/hackage.scm,
guix/scripts/import/nix.scm,
guix/scripts/import/pypi.scm,
guix/scripts/import/stackage.scm,
guix/scripts/lint.scm,
guix/scripts/offload.scm,
guix/scripts/pack.scm,
guix/scripts/package.scm,
guix/scripts/perform-download.scm,
guix/scripts/publish.scm,
guix/scripts/pull.scm,
guix/scripts/refresh.scm,
guix/scripts/size.scm,
guix/scripts/substitute.scm,
guix/scripts/system.scm,
guix/ssh.scm,
guix/upstream.scm: Use 'G_' instead of '_'.  Most of this change was
obtained by running: "sed -i -e's/(_ "/(G_ "/g' `find -name \*.scm`".
2017-05-03 16:16:17 +02:00
Petter 2f3108ad03
gnu: Avoid circular dependencies by Perl license.
* guix/licenses.scm (perl-license): New variable.
* gnu/packages/bioinformatics.scm: Change (package-license perl) to perl-license.
* gnu/packages/compression.scm: Same.
* gnu/packages/databases.scm: Same.
* gnu/packages/gd.scm: Same.
* gnu/packages/language.scm: Same.
* gnu/packages/libevent.scm: Same.
* gnu/packages/mail.scm: Same.
* gnu/packages/messaging.scm: Same.
* gnu/packages/ncurses.scm: Same.
* gnu/packages/networking.scm: Same.
* gnu/packages/photo.scm: Same.
* gnu/packages/tcl.scm: Same.
* gnu/packages/tex.scm: Same.
* gnu/packages/tls.scm: Same.
* gnu/packages/web.scm: Same.
* gnu/packages/wm.scm: Same.
* gnu/packages/xml.scm: Same.
* gnu/packages/xorg.scm: Same.
* gnu/packages/zip.scm: Same.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-05-02 23:41:14 +02:00
Ludovic Courtès dcb95c1fc9
monads: Add a template and specialization mechanism for monadic procedures.
* guix/monads.scm (%templates, %template-instances): New variables.
(register-template!, register-template-instance!): New procedures.
(template-directory, define-template): New macro.
(foldm, sequence, anym): Define using 'define-template'.  Avoid replace
ellipses with dots.
(mapm): Likewise, but do not use 'foldm'.
* guix/store.scm: Add 'template-directory' invocation.
2017-05-02 23:41:13 +02:00
Ludovic Courtès 7b9ac883ea
download: Continue handshake upon TLS warning alerts.
This allows us to download from site such as
<https://fusionforge.int-evry.fr> where the server does not recognize
the server name passed via the 'server_name' extension.

* guix/build/download.scm (tls-wrap): Catch 'gnutls-error' around
'handshake'.  Upon ERROR/WARNING-ALERT-RECEIVED, print a message and
call 'handshake'.
2017-05-02 23:41:13 +02:00
Ludovic Courtès 756be979cb
licenses: Add CeCILL and CeCILL-B.
* guix/licenses.scm (cecill, cecill-b): New variables.
2017-05-02 23:41:13 +02:00
Ludovic Courtès 8a2105078b
substitute: Validate substitute URLs.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2017-04/msg00548.html>.

* guix/scripts/substitute.scm (validate-uri): New procedure.
(guix-substitute): Use it.
2017-05-02 12:32:52 +02:00
Ludovic Courtès e723178a10
publish: Use a larger zlib buffer for compression with '--cache'.
* guix/scripts/publish.scm (bake-narinfo+nar): Pass #:buffer-size to
'call-with-gzip-output-port'.
2017-05-02 12:32:51 +02:00
Mark H Weaver bedba06426
Add package/inherit.
* guix/packages.scm (package/inherit): New public macro.
2017-05-02 04:19:09 -04:00
Clément Lassieur 3314396138
licenses: Add new meta-license fsdg-compatible.
* guix/licenses.scm (fsdg-compatible): New record with constructor.
2017-05-01 21:32:15 +02:00
Ludovic Courtès dff3189c7d
publish: Produce a "FileSize" narinfo field when possible.
* guix/scripts/publish.scm (narinfo-string): Add #:file-size parameter.
Produce a "FileSize" field when COMPRESSION is eq? to '%no-compression'
or when FILE-SIZE is true.
(bake-narinfo+nar): Pass #:file-size.
* tests/publish.scm ("/*.narinfo")
("/*.narinfo with properly encoded '+' sign")
("with cache"): Check for "FileSize".
2017-05-01 17:28:20 +02:00
Ludovic Courtès 6d1a5e5ffd
refresh: Report packages using the "@" syntax.
* guix/scripts/refresh.scm (list-dependents)[full-name]: New procedure.
Use 'full-name' instead of 'package-full-name'.
* doc/guix.texi (Invoking guix refresh): Adjust example accordingly.
2017-05-01 16:38:30 +02:00
Roel Janssen 7c3e4660a5
import: Update Bioconductor release to 3.5.
* guix/import/cran.scm: Change Bioconductor release to 3.5.
2017-04-28 11:02:26 +02:00
Ludovic Courtès 25a49294ca
cache: Work around 'time-monotonic' bug in Guile 2.2.2.
* guix/cache.scm (time-monotonic) [guile-2.2]: New variable.
* tests/cache.scm (time-monotonic) [guile-2.2]: Likewise.
* guix/build/download.scm (time-monotonic) [guile-2.2]: Adjust comment:
it's a 2.2.2 bug.
2017-04-22 14:42:15 +02:00
Ludovic Courtès 1fe958d62a
download: Work around Guile 2.2 bug with 'time-monotonic' objects.
* guix/build/download.scm (time-monotonic) [guile-2.2]: New variable.
2017-04-22 01:25:22 +02:00
Ludovic Courtès 9231ef12f2
derivations: Restore UTF-8 encoding of build scripts.
Reported by Mark H Weaver <mhw@netris.org>
at <https://lists.gnu.org/archive/html/guix-devel/2017-04/msg00457.html>.

* guix/derivations.scm (build-expression->derivation): Use a string
output port for the expression.  This reverts part of
2dce88d5bb.
* tests/derivations.scm ("build-expression->derivation and builder
encoding"): New test.
2017-04-21 22:45:29 +02:00
Ludovic Courtès 285f63e805
store: Support 'ssh://' URIs in 'GUIX_DAEMON_SOCKET'.
This allows 'guix' commands to talk to a remote store over SSH.

* guix/store.scm (connect-to-daemon)[connect]: Call 'resolve-interface'
for unknown URI schemes.
* guix/store/ssh.scm: New file.
* Makefile.am (MODULES): Add it.
* doc/guix.texi (The Store): Document it.  Mark remote access as
experimental.
2017-04-21 19:17:36 +02:00
Ludovic Courtès e537833726
ssh: Decompose 'connect-to-remote-daemon'.
* guix/ssh.scm (remote-daemon-channel): New procedure.
(connect-to-remote-daemon): Implement in terms of it.
2017-04-21 19:17:36 +02:00
Ludovic Courtès 615c5298f7
ssh: Move 'open-ssh-session' to (guix ssh).
* guix/scripts/copy.scm (%compression, open-ssh-session): Move to...
* guix/ssh.scm: ... here.  Use '&message' conditions instead of calling
'leave'.
2017-04-21 19:17:34 +02:00
Ludovic Courtès ba97e454bf
offload: Avoid using '_' as a 'match' pattern.
* guix/scripts/offload.scm (host-key->type+key, machine-load)
(process-request, guix-offload): Do not use '_' as a 'match' pattern.
2017-04-21 17:23:37 +02:00
Ludovic Courtès 3dff90ce34
store: Add support for remote connections via 'guix://' URIs.
* guix/store.scm (open-inet-socket): New procedure.
(connect-to-daemon): Support the 'guix' URI scheme.
* doc/guix.texi (The Store): Document it.
2017-04-21 17:23:37 +02:00
Ludovic Courtès 3b5cd17a97
store: Add 'system-error-to-connection-error' macro.
* guix/store.scm (system-error-to-connection-error): New macro.
(open-unix-domain-socket): Use it instead of 'catch'.
2017-04-21 17:23:37 +02:00
Ludovic Courtès 1397b422e2
store: 'GUIX_DAEMON_SOCKET' can now be a URI.
* guix/store.scm (%daemon-socket-file): Rename to...
(%daemon-socket-uri): ... this.
(connect-to-daemon): New procedure.
(open-connection): Rename 'file' to 'uri'.  Use 'connect-to-daemon'
instead of 'open-unix-domain-socket'.
* guix/tests.scm (open-connection-for-tests): Rename 'file' to 'uri'.
* tests/guix-build.sh: Add tests.
* tests/store.scm ("open-connection with file:// URI"): New tests.
2017-04-21 17:23:37 +02:00
Ludovic Courtès 2dce88d5bb
derivations: Avoid string-to-bytevector conversions.
On Guile 2.2.1, this yields a 5% speedup on:

  guix build libreoffice xmonad certbot -n --no-substitutes --no-build-hook

* guix/derivations.scm (derivation->string): Rename to...
(derivation->bytevector): ... this.  Use 'open-bytevector-output-port'
instead of 'call-with-output-string'.
(derivation-hash): Remove string-to-bytevector conversion before
'sha256' call.
(build-expression->derivation): Use 'add-data-to-store' and an
bytevector port instead of a string port for the expression.
2017-04-20 23:35:55 +02:00
Ludovic Courtès e1bbc0e38d
publish: Add a handler for / and /index.html.
Suggested by Quiliro <quiliro@riseup.net>
in <https://bugs.gnu.org/26567>.

* guix/scripts/publish.scm (render-home-page): New procedure.
(make-request-handler): Handle it.
2017-04-19 23:43:51 +02:00
Ludovic Courtès 2363bdd707
gexp: 'gexp-modules' accepts plain Scheme objects.
* guix/gexp.scm (gexp-modules): Return '() when not (gexp? GEXP).
* tests/gexp.scm ("gexp-modules and literal Scheme object"): New test.
2017-04-19 17:51:39 +02:00
Ludovic Courtès d72b42064b
publish: Remove expired cache entries when '--ttl' is used.
* guix/scripts/publish.scm (narinfo-files): New procedure.
(render-narinfo/cached)[delete-file]: New procedure.  Add call to
'maybe-remove-expired-cache-entries'.
* doc/guix.texi (Invoking guix publish): Document the interation between
--cache and --ttl.
2017-04-18 23:19:30 +02:00
Ludovic Courtès 2ea2aac6e9
Add (guix cache) and use it in (guix scripts substitute).
* guix/cache.scm, tests/cache.scm: New files.
* Makefile.am (MODULES, SCM_TESTS): Add them.
* guix/scripts/substitute.scm (obsolete?): Remove.
(remove-expired-cached-narinfos): Rename to...
(cached-narinfo-expiration-time): ... this.  Remove the removal part and
only keep the expiration time part.
(narinfo-cache-directories): Add optional 'directory' parameter and
honor it.
(maybe-remove-expired-cached-narinfo): Remove.
(cached-narinfo-files): New procedure.
(guix-substitute): Use 'maybe-remove-expired-cache-entries' instead of
'maybe-remove-expired-cached-narinfo'.
2017-04-18 23:19:30 +02:00
Ludovic Courtès 00753f7038
publish: Add '--cache' and '--workers'.
Fixes <http://bugs.gnu.org/26201>.
Reported by <dian_cecht@zoho.com>.

These options allow nars to be "baked" off-line and cached instead of
being compressed on the fly.  As a side-effect, this allows us to
provide a 'Content-Length' header for nars.

* guix/scripts/publish.scm (show-help, %options): Add '--cache' and
'--workers'.
(%default-options): Add 'workers'.
(nar-cache-file, narinfo-cache-file, run-single-baker): New procedures.
(single-baker): New macro.
(render-narinfo/cached, bake-narinfo+nar)
(render-nar/cached): New procedures.
(make-request-handler): Add #:cache and #:pool parameters and honor
them.
(run-publish-server): Likewise.
(guix-publish): Honor '--cache' and '--workers'.
* tests/publish.scm ("with cache"): New test.
* doc/guix.texi (Invoking guix publish): Document it.
2017-04-18 23:18:41 +02:00
Ludovic Courtès 339a79fd6a
publish: Use 'sendfile' when possible.
* guix/scripts/publish.scm (http-write): In the
'application/octet-stream' case, use 'sendfile' when OUTPUT is a file
port.
2017-04-18 23:17:18 +02:00
Ludovic Courtès 905ae5276d
publish: Introduce 'actual-compression'.
* guix/scripts/publish.scm (actual-compression): New procedure.
(narinfo-string): Use it.
2017-04-18 23:17:18 +02:00
Ludovic Courtès 1563d6c79f
Add (guix workers).
* guix/workers.scm, tests/workers.scm: New files.
* Makefile.am (MODULES, SCM_TESTS): Add them.
* .dir-locals.el: Add rule for 'eventually'.
2017-04-18 23:17:17 +02:00
Ludovic Courtès e16c823f80
serialization: Remove Guile < 2.0.9 workaround.
* guix/serialization.scm (write-contents): Assume 'sendfile' is always
defined.
2017-04-17 23:31:28 +02:00
Ludovic Courtès 94df39cc08
records: Slight simplification.
* guix/records.scm (make-syntactic-constructor): Simplify 'find' expression.
2017-04-17 23:31:28 +02:00
Marius Bakke 7c7b802cce
download: Add netfilter mirror.
* guix/download.scm (%mirrors): Add mirrors for www.netfilter.org.
2017-04-17 23:05:46 +02:00
Mathieu Othacehe a9eadc06ac
scripts: system: Rename --no-grub option to --no-bootloader.
* guix/scripts/system.scm (%options, show-help): Adjust accordingly.
Keep "--no-grub" for compatibility reasons, but do not mention it in the help.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-04-17 17:41:54 +02:00
Ludovic Courtès 1730c5b509
lint: Avoid non-literal format strings.
Reported by Mathieu Othacehe <m.othacehe@gmail.com>
at <http://bugs.gnu.org/26498>.

* guix/scripts/lint.scm (warn-if-package-has-input): Rename to...
(package-input-intersection): ... this.  Remove 'linted' and 'message'
parameters.  Return a list of inputs.
(check-inputs-should-be-native): Adjust accordingly.
(check-inputs-should-not-be-an-input-at-all): Likewise.
2017-04-16 12:08:30 +02:00
Ludovic Courtès f816dba680
ui: Gracefully report '&message' conditions.
* guix/ui.scm (report-load-error, warn-about-load-error)
(read/eval): Add special-case for SRFI-35 &message conditions.
2017-04-16 00:48:07 +02:00
Ludovic Courtès efe7d19a9e
services: 'service-parameters' becomes 'service-value'.
* gnu/services.scm (<service>)[parameters]: Rename to...
[value]: ... this.
Change calls to 'service-parameters' to 'service-value'.
* gnu/system.scm, gnu/tests/base.scm,
guix/scripts/system.scm, tests/services.scm: Likewise.
* doc/guix.texi (Service Reference): Adjust accordingly.
2017-04-16 00:48:07 +02:00
Leo Famulari c8a3dea847
packages: Enable threaded compression of source tarballs.
This provides a ~2x speedup when using 4 threads.

* guix/packages.scm (patch-and-repack)[build]: Invoke xz with
'--threads=0' when re-packing tarballs.
2017-04-15 18:34:59 -04:00
Danny Milosavljevic 958a1fda9e
system: Make grub use <menu-entry> instead of <boot-parameters> again.
* gnu/system/grub.scm: Remove boot-parameters->menu-entry.
(grub-configuration): Don't use boot-parameters->menu-entry.
* gnu/system.scm (operating-system-bootcfg): Use menu-entry.
* guix/scripts/system.scm (reinstall-grub): Use profile-grub-entries.
(perform-action): Use profile-grub-entries.
2017-04-15 22:02:38 +02:00
Danny Milosavljevic abae042ea4
scripts: system: Introduce profile-boot-parameters.
* guix/scripts/system.scm (profile-boot-parameters): New variable.
(reinstall-grub): Use profile-boot-parameters.
(perform-action): Use profile-boot-parameters.

Follow-up to 2e58e05bb6.
2017-04-15 19:34:00 +02:00
Mathieu Othacehe e61519ab9c
scripts: system: Rename grub? and install-grub? to bootloader? and install-bootloader?.
* guix/scripts/system.scm (perform-action): Rename grub? to bootloader,
(%options): rename install-grub? to install-bootloader?,
(%default-options): ditto,
(process-action): reindent and rename grub? to bootloader?.
2017-04-15 15:22:47 +02:00
Mathieu Othacehe c76b3046f6
system: Rename operating-system-grub.cfg to operating-system-bootcfg.
* gnu/system.scm (operating-system-grub.cfg): Rename to...
(operating-system-bootcfg): ... this.
* gnu/system/vm.scm (system-disk-image): Use operating-system-bootcfg.
(system-qemu-image): Use operating-system-bootcfg.
(system-qemu-image/shared-store): Use operating-system-bootcfg.
* guix/scripts/system.scm (perform-action): Use operating-system-bootcfg.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-04-15 14:41:10 +02:00
Danny Milosavljevic 03daeaa70f
scripts: system: Back out operating-system-bootcfg change.
Follow-up to 475e2ce211.

* guix/scripts/system.scm (perform-action): Back out operating-system-bootcfg
change.
2017-04-15 14:41:10 +02:00
Danny Milosavljevic 475e2ce211
scripts: system: Move save-load-path-excursion and save-environment-excursion macros to the top.
* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-04-15 13:28:25 +02:00
Mathieu Othacehe a41134b442
scripts: system: Move save-load-path-excursion and save-environment-excursion macros to the top.
* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2017-04-15 12:33:56 +02:00
Mathieu Othacehe e60ee79040
build-system/cargo: Remove store reference.
* guix/build/cargo-build-system.scm (generate-checksums): Remove store
  reference from comment. This comment was matching
  assert-no-store-file-names regexp in Makefile.am.
  Also, edit procedure docstring to precise that DIR-NAME is a store
  directory.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-14 12:29:20 +02:00
Mathieu Othacehe 23e525e109
syscalls: Add load-linux-module.
* guix/build/syscalls.scm (load-linux-module): New procedure. Reimplemented
from guile-linux-syscalls.patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-11 11:13:26 +02:00
Mathieu Othacehe c5cd4fad09
syscalls: Use define-as-needed for network-interface syscalls.
* guix/build/syscalls.scm (network-interface-flags): Use define-as-needed macro
and remove from export list.
(set-network-interface-flags): Ditto.
(set-network-interface-address): Ditto.
(IFF_UP, IFF_BROADCAST and IFF_LOOPBACK): Ditto.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-11 11:13:25 +02:00
Mathieu Othacehe 7df4d3465d
syscalls: Use define-as-needed for mount and umount.
* guix/build/syscalls.scm (mount): Use define-as-needed macro
and remove from export list.
(umount): Ditto.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-11 11:13:25 +02:00
Mathieu Othacehe 8336df0668
syscalls: Add reboot.
* guix/build/syscalls.scm (define-as-needed): New macro.
(reboot): New procedure. Reimplemented from guile-linux-syscalls.patch.
(RB_AUTOBOOT, ..., RB_KEXEC): New flags copied from static Guile patch.

Co-Authored-By: Ludovic Courtès <ludo@gnu.org>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-11 11:13:25 +02:00
Chris Marusich 8bc2183fe5
monads: Improve mlet, mlet*, and mbegin documentation.
* doc/guix.texi (The Store Monad) <mlet, mlet*, mbegin>: Clarify
their intended usage.
* guix/monads.scm (mbegin): Update docstring accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 14:40:51 +02:00
Chris Marusich 60a9fcb137
monads, doc: Improve mwhen and munless documentation.
* doc/guix.texi (The Store Monad) <mwhen, munless>: Document them.
* guix/monads.scm (mwhen, munless): Clarify their intended use.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 14:40:51 +02:00
Chris Marusich d922c8e4b7
monads: Use intent-revealing parameter names.
* guix/monads.scm (mwhen, munless): Rename parameters from 'exp0' and 'exp' to
  'mexp0' and 'mexp', respectively.  This makes it more obvious that these
  expressions must be monadic expressions.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 14:40:50 +02:00
Mathieu Othacehe f91fcd9c42
syscalls: Allow mount and umount use from static Guile.
* guix/build/syscalls.scm (mount): Use Guile core mount if called from
  static Guile, otherwise use FFI based mount implementation.
  (umount): Ditto.
  This allows to use (guix build syscalls) from a module independently
  of calling context.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-07 23:30:39 +02:00
Ludovic Courtès 5537f2d279
profiles: Slightly improve the instructions in 'etc/profile'.
* guix/build/profiles.scm (build-etc/profile): Fix typo in comment.
Add backslash in the generated shell comment.
2017-04-07 23:30:38 +02:00
Ludovic Courtès 83cfa0247b
pack: Add '--expression'.
* guix/scripts/pack.scm (%options, show-help): Add '--expression'.
(guix-pack)[maybe-package-argument]: New procedure.
Use it, and remove variable 'specs'.
* doc/guix.texi (Invoking guix pack): Document '--expression'.
2017-04-07 23:30:38 +02:00
Ludovic Courtès 9a3762a768
size: Avoid '_' as a pattern variable in 'match'.
* guix/scripts/size.scm (display-profile, profile->page-map): Don't use
'_' as a 'match' pattern variable.
2017-04-07 00:17:16 +02:00
Chris Marusich 5ea69d9a56
system: Support the --root option in 'guix system'.
Fixes <https://bugs.gnu.org/26271>.

* guix/scripts/system.scm (perform-action): Add #:gc-root parameter and
honor it.
(show-help): Document the --root option.
(%options): Add 'root'.
(process-action): Pass 'root' option to perform-action as #:gc-root.
* doc/guix.texi (Invoking guix system): Document '--root'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-06 10:24:32 +02:00
Chris Marusich a09b45da6f
build: Add and export procedure 'register-root*'.
* guix/scripts/build.scm (register-root*): Add and export it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-06 10:11:26 +02:00
Ludovic Courtès 50f4ea18c4
environment: Deal with single-entry search paths.
This is a followup to fcd75bdbfa.

* guix/scripts/environment.scm (create-environment): Check whether
SEPARATOR is #f.
2017-04-05 22:50:21 +02:00
Maxim Cournoyer a0b87ef8ec
profiles: Generate database file for man pages.
The mandb database file (index.db) is used by the "apropos" (whatis) or
"man -k" commands.  This change introduces a profile hook to generate
such database file.

* guix/profiles.scm (manual-database): New procedure.
(%default-profile-hooks): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-04-05 22:45:41 +02:00
Ludovic Courtès 1618006d0b
build-system/python: 'package-with-explicit-python' uses 'package-mapping'.
* guix/build-system/python.scm (package-with-explicit-python)
[package-variant, cut?]: New procedures.
[transform]: Remove 'mlambdaq' form and input tuple handling.
Use 'package-mapping'.
2017-04-05 22:45:41 +02:00
Ludovic Courtès f37f2b83fa
packages: Add 'package-mapping' and base 'package-input-rewriting' on it.
* guix/packages.scm (package-mapping): New procedure.
(package-input-rewriting): Rewrite in terms of 'package-mapping'.
* tests/packages.scm ("package-mapping"): New test.
* doc/guix.texi (Defining Packages): Document it.
2017-04-05 22:45:41 +02:00
Ricardo Wurmus 5ae63362ae
import cran: Distinguish Bioconductor data packages.
* guix/import/cran.scm (bioconductor-package?): Exclude Bioconductor
data packages.
(bioconductor-data-package?): New procedure.
2017-04-05 18:38:51 +02:00
Leo Famulari b23c1a71be
download: Update the GnuPG mirror list.
* guix/download.scm (%mirrors) <gnupg>: Use HTTP for TU Wien mirror.
2017-04-05 07:07:35 -04:00
Chris Marusich 1c6b2d3f98
build: Export register-root procedure.
* guix/scripts/build.scm: Export register-root procedure.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-05 00:53:03 +02:00
Leo Famulari 6c17422eac
utils: Fix handling of shell arguments for xz compression.
Fixes test failures related to xz compression in tests/utils.scm.

This is a followup to commit 63102406f2.

* guix/utils.scm (decompressed-port, compressed-port, compressed-output-port):
Split each shell argument into its own list element.
2017-04-03 23:23:39 -04:00
Ludovic Courtès 76c486196f
packages: Catch invalid input errors for structs.
Reported by Thomas Sigurdsen <thomas.sigurdsen@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2017-04/msg00007.html>.

* guix/packages.scm (expand-input): Add 'guard' form around call to
'package-source-derivation'.
* tests/packages.scm (dummy): New test.
2017-04-04 00:10:00 +02:00
Ludovic Courtès 3e43166ffc
gexp: 'lower-object' raises an exception when passed an invalid object.
* guix/gexp.scm (&gexp-error, &gexp-input-error): New error conditions.
(lower-object): Raise &gexp-input-error when 'lookup-compiler' returns #f.
* tests/gexp.scm ("lower-object & gexp-input-error?"): New test.
* guix/ui.scm (call-with-error-handling): Add case for 'gexp-input-error?'.
2017-04-04 00:10:00 +02:00
Ludovic Courtès 2a0d5de5a9
Merge branch 'core-updates' 2017-04-03 00:13:06 +02:00
Efraim Flashner 63102406f2
guix: Compress and decompress xz archives in parallel.
* guix/scripts/pack.scm (%compressors): Add flag '-T0' when calling "xz".
* guix/utils.scm (decompressed-port, compressed-port,
compressed-output-port): Same.
2017-04-02 14:42:20 +03:00
Tobias Geerinckx-Rice f264e838c0
substitute: Send ‘User-Agent’ header.
* guix/scripts/substitute.scm (narinfo-request): Pass ‘User-Agent’ #:headers
to ‘build-request’.
2017-03-31 15:33:16 +02:00
Marius Bakke 84157bb8bf
Merge branch 'master' into core-updates
Most conflicts are from 6fd52309b8.
2017-03-30 22:59:53 +02:00
Ludovic Courtès cdb3f734cf
packages: Remove "mips64el-linux" from '%hydra-supported-systems'.
* guix/packages.scm (%hydra-supported-systems): Remove "mips64el-linux".
2017-03-29 22:50:42 +02:00
Ludovic Courtès e1f02f92e9
Replace (compose not PROC) with simpler idioms.
* gnu/packages/bioinformatics.scm (python-pysam)[arguments] <check>:
Use (negate proc) instead of (compose not proc).
* guix/import/cran.scm (recursive-import): Likewise.
* guix/import/elpa.scm (filter-dependencies): Use 'remove' instead of
'(filter (compose not proc) ...)'.
2017-03-28 22:15:44 +02:00
Ricardo Wurmus 1a75083b0d
import cran: Print package stream in the expected order.
* guix/scripts/import/cran.scm (guix-import-cran): Reverse list of packages.
2017-03-28 15:54:10 +02:00
Ricardo Wurmus 2dca8b2d51
import cran: Automatically add gfortran and zlib when needed.
* guix/import/cran.scm (needs-fortran?, needs-zlib?): New procedures.
(description->package): Use them.
2017-03-28 15:37:47 +02:00
Ludovic Courtès 6dfd683dc7
download: Properly parse ftp:// URLs that lack user info.
Fixes a regression introduced in
a4f5423415.

Reported by Hartmut Goebel.

* guix/build/download.scm (ftp-fetch): Account for the case where
'uri-userinfo' returns #f.  Remove the case where it returns "" since
that cannot happen.
2017-03-28 13:30:09 +02:00
Ludovic Courtès bdb59b331b
derivations: Do not fetch narinfos for non-substitutable items.
This avoids connections to substitute servers for derivations that are
not substitutable anyway, such as profiles.

Reported by Andy Wingo.

* guix/derivations.scm (substitution-oracle): Skip derivations that do
not pass 'substitutable-derivation?'.
* tests/derivations.scm ("substitution-oracle and #:substitute? #f"):
New test.
2017-03-28 10:00:05 +02:00