79dc47c9c9
gnu: Add usocket.
...
* gnu/packages/lisp.scm (cl-usocket, ecl-usocket, sbcl-usocket): New variables.
2018-11-25 13:54:47 +01:00
be01e79caa
gnu: Add usocket-server.
...
* gnu/packages/lisp.scm (cl-usocket-server, ecl-usocket-server, sbcl-usocket-server): New variables.
2018-11-25 13:54:47 +01:00
75c95c7652
gnu: Add sbcl-usocket-boot0.
...
* gnu/packages/lisp.scm (sbcl-usocket-boot0): New variable.
2018-11-25 13:54:47 +01:00
9fabcb6ce2
gnu: Add portable-threads.
...
* gnu/packages/lisp.scm (cl-portable-threads, ecl-portable-threads, sbcl-portable-threads): New variables.
2018-11-25 13:54:47 +01:00
9eeef6abb2
gnu: Add cl-css.
...
* gnu/packages/lisp.scm (cl-css, ecl-cl-css, sbcl-cl-css): New variables.
2018-11-25 13:54:47 +01:00
96ce8b5507
gnu: Add cl-markup.
...
* gnu/packages/lisp.scm (cl-markup, ecl-cl-markup, sbcl-cl-markup): New variables.
2018-11-25 13:54:46 +01:00
07fdf96140
gnu: diffoscope: Update to 106.
...
* gnu/packages/package-management.scm (diffoscope): Update to 106.
2018-11-25 12:57:26 +01:00
c1d80c7a9c
gnu: diffoscope: Fix test failure.
...
* gnu/packages/package-management.scm (diffoscope)[arguments]: Remove
failing Berkeley DB test.
2018-11-25 12:57:20 +01:00
254602cdf8
gnu: guix: Update to 71a78ba.
...
* gnu/packages/package-management.scm (guix): Update to 71a78ba
2018-11-25 01:19:21 +01:00
71a78ba65b
gnu: emacs-company: Update to 0.9.7.
...
* gnu/packages/emacs.scm (emacs-company): Update to 0.9.7.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-24 22:42:34 +01:00
61d6451372
gnu: emacs-zenburn-theme: Update to 2.6.
...
* gnu/packages/emacs.scm (emacs-zenburn-theme): Update to 2.6.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-24 22:40:49 +01:00
682c291899
gnu: sqlcipher: Update to 3.4.2.
...
* gnu/packages/databases.scm (sqlcipher): Update to 3.4.2.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-24 22:40:46 +01:00
4820b75de0
Merge branch 'master' into core-updates
2018-11-24 19:44:05 +01:00
1261804985
gnu: python-pika: Update to 0.12.0.
...
* gnu/packages/python.scm (python-pika): Update to 0.12.0.
2018-11-24 19:43:18 +01:00
4b2d1dc4dc
gnu: bless: Adjust to zlib static output.
...
* gnu/packages/bioinformatics.scm (bless)[inputs]: Add ZLIB:STATIC.
[arguments]: Adjust #:make-flags accordingly.
2018-11-24 19:32:48 +01:00
1b3083267c
gnu: ocaml-piqilib: Remove duplicate 'home-page' field.
...
This is a followup to commit 564cf93f2a
2018-11-24 13:30:06 -05:00
e1d97c4efc
gnu: rhythmbox: Update hash of patch.
...
* gnu/packages/gnome.scm (rhythmbox)[source]: Update hash of the applied
patch.
2018-11-24 13:29:59 -05:00
5ff6e06763
gnu: adb: Fix FTBFS with Glibc 2.28.
...
* gnu/packages/android.scm (adb)[arguments]: Add phase 'glibc-compat'.
2018-11-24 19:26:01 +01:00
45bc4b7ecb
gnu: python2-fasteners: Propagate python2-futures.
...
* gnu/packages/python.scm (python-fasteners)[properties]: New field.
(python2-fasteners)[propagated-inputs]: Add PYTHON2-FUTURES.
2018-11-24 18:43:07 +01:00
366cd7fcba
gnu: python2-futures: Update to 3.2.0.
...
* gnu/packages/python.scm (python2-futures): Update to 3.2.0.
2018-11-24 18:43:07 +01:00
799d4bac62
gnu: python2-futures: Disable tests.
...
* gnu/packages/python.scm (python2-futures)[arguments]: Set #:test? #f.
2018-11-24 18:43:06 +01:00
4bddcae94b
gnu: sbcl: Update to 1.4.13.
...
* gnu/packages/lisp.scm (sbcl): Update to 1.4.13.
[native-inputs]: Use minimal texlive-union instead of full texlive.
[native-inputs]: Use CCL instead of buggy CLISP.
[arguments]: Replace all (zero? (system* ...)) by invoke.
2018-11-24 18:36:14 +01:00
27ebd5c4f9
gnu: gcl: Remove unnecessary texlive input.
...
* gnu/packages/lisp.scm (gcl)[native-inputs]: Remove texlive.
2018-11-24 18:36:13 +01:00
60667159d3
gnu: python-pycurl: Fix FTBFS from 7b84410046.
...
* gnu/packages/python-web.scm (python-pycurl)[arguments]: Add phase
'configure-tls-backend'.
2018-11-24 15:57:56 +01:00
68f2e55206
gnu: ledger: Fix build with Boost >= 1.68.
...
* gnu/packages/finance.scm (ledger)[arguments]: Add phase 'boost-compat.
2018-11-24 15:57:56 +01:00
f028823c0f
gnu: mosaik: Fix FTBFS from b90289dadc.
...
* gnu/packages/bioinformatics.scm (mosaik)[inputs]: Add ZLIB:STATIC.
2018-11-24 15:57:56 +01:00
15b5f9f718
gnu: python-cheetah: Update to 3.1.0.
...
* gnu/packages/python.scm (python2-cheetah): Rename to ...
(python-cheetah): ... this. Update to 3.1.0.
[arguments]: Add custom 'check' phase.
[propagated-inputs]: Change PYTHON2-MARKDOWN to PYTHON-MARKDOWN.
(python2-cheetah): Rewrite in terms of PACKAGE-WITH-PYTHON2.
2018-11-24 15:57:56 +01:00
59a1aa595b
gnu: python2-cheetah: Update home page.
...
* gnu/packages/python.scm (python-cheetah)[home-page]: Update to current.
2018-11-24 15:57:56 +01:00
96cfa168e5
gnu: clojure: Move to new clojure.scm.
...
* gnu/local.mk (clojure): Include new clojure.scm.
* gnu/packages/clojure.scm: Add clojure, clojure-algo-generic,
clojure-algo-monads, clojure-core-match, clojure-instaparse,
clojure-tools-macro.
* gnu/packages/lisp.scm: Remove clojure, clojure-algo-generic,
clojure-algo-monads, clojure-core-match, clojure-instaparse,
clojure-tools-macro.
2018-11-24 15:20:51 +01:00
e83c7d1aba
gnu: femtolisp: Move to scheme.scm.
...
* gnu/packages/lisp.scm (femtolisp): Remove.
* gnu/packages/scheme.scm (femtolisp): Add.
2018-11-24 15:11:37 +01:00
083ce0ad5e
gnu: Add APFS-FUSE.
...
* gnu/packages/file-systems.scm (apfs-fuse): New variable.
2018-11-23 21:54:52 -05:00
318507a6f6
gnu: linux-libre: Update to 4.19.4.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.19.4.
(%linux-libre-hash): Update hash.
2018-11-23 21:05:18 -05:00
245139cd0d
gnu: linux-libre@4.14: Update to 4.14.83.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.83.
(%linux-libre-4.14-hash): Update hash.
2018-11-23 21:03:29 -05:00
268ba4cbcf
gnu: linux-libre@4.9: Update to 4.9.140.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.140.
2018-11-23 21:02:53 -05:00
f3d1a0463a
gnu: linux-libre@4.4: Update to 4.4.164.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.164.
2018-11-23 21:01:49 -05:00
5d46c8b47a
gnu: freedesktop.scm: Sort imports and remove duplicates.
...
* gnu/packages/freedesktop.scm: Sort imports alphabetically.
2018-11-24 02:17:46 +01:00
01cef16f85
gnu: rust: Don't depend on 'git'.
...
* gnu/packages/rust.scm (rust-1.19)[inputs]: Remove GIT.
(rust-1.20)[arguments]: Disable Cargo tests that require git.
(rust-1.26)[arguments]: Likewise.
2018-11-24 02:03:12 +01:00
52b24ba495
gnu: mariadb: Update to 10.1.37 [security fixes].
...
This release fixes CVE-2018-3282, CVE-2018-3174, CVE-2018-3143, CVE-2018-3156,
and CVE-2018-3251. See
<https://mariadb.com/kb/en/library/mariadb-10137-release-notes/ > for details.
* gnu/packages/databases.scm (mariadb): Update to 10.1.37.
2018-11-24 02:03:12 +01:00
4d8f4a3f00
Merge branch 'master' into core-updates
2018-11-24 01:58:18 +01:00
dc4851093c
gnu: libraw: Update to 0.19.1.
...
* gnu/packages/photo.scm (libraw): Update to 0.19.1.
2018-11-24 01:50:43 +01:00
43bcf392a7
gnu: libtorrent-rasterbar: Update to 1.1.11.
...
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.11.
2018-11-24 01:50:43 +01:00
c2be790fb1
gnu: Add deluge.
...
* gnu/packages/bittorrent.scm (deluge): New variable.
Co-authored-by: Mike Rosset <mike.rosset@gmail.com>
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-24 01:50:43 +01:00
39da44c2c0
gnu: libtorrent-rasterbar: Compile Python bindings in C++11 mode.
...
* gnu/packages/bittorrent.scm (libtorrent-rasterbar)[arguments]: Add phase to
substitute setup.py.
Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2018-11-24 01:50:43 +01:00
8afe166dd7
gnu: Add python-service-identity.
...
* gnu/packages/python-crypto.scm (python-service-identity,
python2-service-identity): New variables.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-24 01:50:42 +01:00
f12f70b1f2
gnu: Add emacs-matrix-client.
...
* gnu/packages/emacs.scm (emacs-matrix-client): New variable.
2018-11-23 21:43:15 +01:00
d4f7b7e127
gnu: Add emacs-a.
...
* gnu/packages/emacs.scm (emacs-a): New variable.
2018-11-23 21:43:15 +01:00
8fc78612b5
gnu: Add emacs-tracking.
...
* gnu/packages/emacs.scm (emacs-tracking): New variable.
2018-11-23 21:43:14 +01:00
87470116e6
gnu: Add emacs-ov.
...
* gnu/packages/emacs.scm (emacs-ov): New variable.
2018-11-23 21:43:14 +01:00
57d30004e5
gnu: python-slepc4py: Update to 3.10.0.
...
* gnu/packages/maths.scm (python-slepc4py): Update to 3.10.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-23 20:27:15 +01:00
cd3681a237
gnu: python-petsc4py: Update to 3.10.0.
...
* gnu/packages/maths.scm (python-petsc4py): Update to 3.10.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-23 20:27:15 +01:00
e93da160ca
gnu: slepc: Update to 3.10.1.
...
* gnu/packages/maths.scm (slepc): Update to 3.10.1.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-23 20:27:15 +01:00
e6951e4ee0
gnu: petsc: Update to 3.10.2
...
* gnu/packages/maths.scm (petsc): Update to 3.10.2.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-23 20:27:15 +01:00
dc240b6aa5
gnu: python-ilinkedlist: Update to 0.4.0.
...
* gnu/packages/python.scm (python-ilinkedlist): Update to 0.4.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-11-23 20:17:23 +01:00
c491f7f8de
gnu: pt-scotch, pt-scotch32: Add Open MPI setup phase.
...
* gnu/packages/maths.scm (pt-scotch)[arguments]: Use 'invoke' instead of
'system*'. Add 'mpi-setup' phase.
(pt-scotch32)[arguments]: Likewise.
2018-11-23 18:44:47 +01:00
d57ec906ba
gnu: pigx-scrnaseq: Use latest snakemake.
...
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace snakemake-4
with snakemake.
2018-11-23 16:30:48 +01:00
92d9a1e2c6
gnu: pigx-bsseq: Use latest snakemake.
...
* gnu/packages/bioinformatics.scm (pigx-bsseq)[inputs]: Replace snakemake-4
with snakemake.
2018-11-23 16:30:16 +01:00
c068d00746
gnu: pigx-chipseq: Use latest snakemake.
...
* gnu/packages/bioinformatics.scm (pigx-chipseq)[inputs]: Replace snakemake-4
with snakemake.
2018-11-23 16:29:35 +01:00
936ea3d664
gnu: python-gevent: Update to 1.3.7.
...
* gnu/packages/python.scm (python-gevent): Update to 1.3.7.
[arguments]: Find headers for greenlet in phase "do-not-use-bundled-sources".
[propagated-inputs]: Add python-objgraph.
2018-11-23 16:01:21 +01:00
72ffb51231
gnu: Add python-objgraph.
...
* gnu/packages/python.scm (python-objgraph): New variable.
2018-11-23 16:01:07 +01:00
93d229cb86
gnu: python-loompy: Remove python-typing.
...
* gnu/packages/bioinformatics.scm (python-loompy)[propagated-inputs]: Remove
python-typing.
2018-11-23 15:59:44 +01:00
332443d429
gnu: emacs-picpocket: Update to 40.
...
Fix version string as well:
<https://lists.gnu.org/archive/html/guix-devel/2018-11/msg00286.html >.
* gnu/packages/emacs.scm (emacs-picpocket): Update to 40.
2018-11-23 22:37:12 +08:00
a605e3c68c
gnu: xpra: Update to 2.4.2.
...
* gnu/packages/xorg.scm (xpra): Update to 2.4.2.
2018-11-23 13:59:36 +01:00
74e35e8c94
gnu: Add u-boot-pinebook.
...
* gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch: New file.
* gnu/packages/patches/u-boot-pinebook-syscon-node.patch: New file.
* gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch: New file.
* gnu/packages/patches/u-boot-pinebook-video-bridge.patch: New file.
* gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch: New file.
* gnu/packages/patches/u-boot-pinebook-dts.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/bootloaders.scm (u-boot-pinebook): New exported variable.
* gnu/bootloader/u-boot.scm (u-boot-pinebook-bootloader): New exported
variable.
* gnu/system/install.scm (pinebook-installation-os): New exported variable.
2018-11-22 21:59:05 +01:00
37751b480f
gnu: podofo: Add patch to fix build.
...
* gnu/packages/patches/podofo-cmake-3.12.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (podofo)[source]: Add patch.
2018-11-22 21:56:41 +01:00
691d39a267
gnu: jalv: Build with python-2.
...
* gnu/packages/audio.scm (jalv)[arguments]: Build with python-2.
2018-11-22 22:06:29 +02:00
eff8e0b4d9
gnu: ccl: Fix missing command line argument support in wrapper.
...
* gnu/packages/lisp.scm (ccl): Fix missing command line argument support in wrapper.
2018-11-22 19:40:03 +01:00
e3a2dd5559
gnu: gajim: Rename wrap-program phases.
...
* gnu/packages/messaging.scm (gajim)[arguments]: Rename wrap-program phases to
wrap-gi-typelib-path and wrap-gsettings-schema-dir.
2018-11-22 22:49:56 +05:30
7ff3f3d22c
gnu: python-scikit-learn: Update to 0.20.1.
...
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.1.
[source](patches): Remove.
[arguments]: Skip network tests with pytest instead of deleting files. Make
sure $HOME is writable.
(python2-scikit-learn): Rewrite in terms of PACKAGE-WITH-PYTHON2.
2018-11-22 17:02:47 +01:00
561e3c1d0d
gnu: supercollider: Update to 3.9.3.
...
* gnu/packages/audio.scm (supercollider): Update to 3.9.3.
2018-11-22 13:00:15 +01:00
af90cc45ae
gnu: giac-xcas: Add a "doc" output
...
* gnu/packages/algebra.scm (giac-xcas): Add "doc" output.
[arguments]: Add phase to install documentation in the appropriate directory.
2018-11-22 12:18:52 +01:00
90d5ec55ae
gnu: giac-xcas: Update to 1.5.0-19.
...
* gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-19.
2018-11-22 12:18:43 +01:00
910ac0effe
gnu: ccl: Properly include x86-headers and remove missing "contrib" folder.
...
* gnu/packages/lisp.scm (ccl): Include x86-headers and remove missing "contrib" folder.
[home-page]: Use HTTPS.
2018-11-22 11:43:17 +01:00
ec8130eb23
Merge branch 'master' into core-updates
2018-11-22 00:10:44 +01:00
437c78bcfb
gnu: python-tblib: Fix test failure with Python 3.7.
...
* gnu/packages/python.scm (python-tblib)[arguments]: Add 'adjust-tests' phase.
2018-11-22 00:00:44 +01:00
d422cbb3d6
linux-initrd: 'expression->initrd' returns the complete file name.
...
Previously 'expression->initrd' would return the directory that contains
the 'initrd' file; now it returns the complete file name for that file.
* gnu/system/linux-initrd.scm (expression->initrd)[builder]: Change
output file name to "initrd.cpio.gz". Tail-call 'file-append' to return
the complete file name.
* gnu/system.scm (operating-system-initrd-file): Remove 'file-append'
call.
* gnu/build/linux-initrd.scm (write-cpio-archive): Check whether OUTPUT
already has the ".gz" suffix; rename if before invoking GZIP if it does,
and otherwise after.
* gnu/system/vm.scm (expression->derivation-in-linux-vm)[builder]: Do
not append "/initrd" to #$initrd.
2018-11-21 23:26:59 +01:00
148caae049
gnu: python-numpy: Update to 1.15.4.
...
* gnu/packages/python.scm (python-numpy): Update to 1.15.4.
2018-11-21 23:15:21 +01:00
d9f8e846b6
gnu: mbedtls-apache: Update to 2.14.0.
...
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.14.0.
2018-11-21 23:06:08 +01:00
b344a3a937
gnu: termite: Update to 14.
...
* gnu/packages/terminals.scm (termite): Update to 14.
2018-11-21 23:01:38 +01:00
b069c30b52
gnu: vte-ng: Update to 0.54.2.a.
...
* gnu/packages/gnome.scm (vte-ng): Update to 0.54.2.a.
2018-11-21 22:59:27 +01:00
6bc00737b0
gnu: vte-ng: Fetch source using git.
...
* gnu/packages/gnome.scm (vte-ng)[source]: Rewrite in terms of GIT-FETCH.
2018-11-21 22:57:48 +01:00
afd90f8d62
gnu: vte-ng: Add a home page.
...
* gnu/packages/gnome.scm (vte-ng)[home-page]: New field.
2018-11-21 22:57:14 +01:00
b96386501f
gnu: python-numpy: Update to 1.14.6.
...
* gnu/packages/python.scm (python-numpy): Update to 1.14.6.
2018-11-21 22:42:25 +01:00
da15325e36
gnu: webkitgtk: Update to 2.22.4.
...
* gnu/packages/webkit.scm (webkitgtk-2.22): Update to 2.22.4.
2018-11-21 22:24:51 +01:00
dca7d8a25c
gnu: git: Update to 2.19.2.
...
* gnu/packages/version-control.scm (git): Update to 2.19.2.
2018-11-21 22:24:35 +01:00
aa9eb25983
gnu: feh: Update to 3.1.
...
* gnu/packages/image-viewers.scm (feh): Update to 3.1.
2018-11-21 22:23:47 +01:00
f9e5caf9ba
gnu: teeworlds: Update to 0.7.0 [fixes CVE-2018-18541].
...
* gnu/packages/games.scm (teeworlds): Update to 0.7.0.
[source]: Switch to git-fetch. Remove all bundled libraries except md5.
[arguments]: Adjust accordingly.
[inputs]: Use sdl2 instead of sdl and python-wrapper instead of python-2.
Add json-parser and pnglite.
* gnu/packages/patches/teeworlds-use-latest-wavpack.patch: Update it.
2018-11-22 03:21:29 +08:00
53367e17b6
gnu: bam: Update to 0.5.1.
...
* gnu/packages/build-tools.scm (bam): Update to 0.5.1.
[source]: Switch to git-fetch.
[arguments]: Use newly provided Makefile.
[inputs]: Add lua.
2018-11-22 03:21:05 +08:00
078e2edf1d
gnu: Add json-parser.
...
* gnu/packages/web.scm (json-parser): New variable.
2018-11-22 03:20:49 +08:00
6e35bad0a9
gnu: Add pnglite.
...
* gnu/packages/image.scm (pnglite): New variable.
2018-11-22 03:20:11 +08:00
9cf4ff199c
Merge remote-tracking branch 'origin/master' into core-updates
2018-11-21 19:41:43 +02:00
bf6859e45a
gnu: libbytesize: Make .mo file builds reproducible.
...
* gnu/packages/c.scm (libbytesize)[sources](modules, snippet): New
fields.
[arguments]: Add #:configure-flags and #:phases.
2018-11-21 17:38:00 +01:00
e555bbfc48
gnu: emacs-pdf-tools: Fix build with recent Poppler.
...
* gnu/packages/patches/emacs-pdf-tools-poppler.patch: New file.
* gnu/packages/emacs.scm (emacs-pdf-tools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-21 17:38:00 +01:00
c3d8c6ac7e
gnu: emacs-pdf-tools: Use 'git-fetch'.
...
* gnu/packages/emacs.scm (emacs-pdf-tools)[source]: Switch to
GIT-FETCH.
[arguments]: In 'emacs-patch-variables' phase, make files writable.
2018-11-21 17:38:00 +01:00
e1f7912761
gnu: casync: Fix build with glibc 2.28.
...
* gnu/packages/patches/casync-renameat2-declaration.patch: New file.
* gnu/packages/sync.scm (casync)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-21 17:38:00 +01:00
4cf879fefb
gnu: ntk: Don't use bundled waf.
...
* gnu/packages/fltk.scm (ntk)[inputs]: Add python-waf.
[arguments]: Add custom phase to replace vendored waf.
2018-11-21 15:43:23 +02:00
24a2e19c43
gnu: python-waf: Use a proper directory structure.
...
Fixes <https://bugs.gnu.org/25634 >.
* gnu/packages/python.scm (python-waf): Replace custom 'install phase to
install "waf" binary into the bin directory. Remove the 'wrap phase.
* gnu/packages/video.scm (mpv)[arguments]: Adjust the 'setup-waf phase
accordingly.
2018-11-21 15:43:23 +02:00
a2aa746cfe
gnu: python-waf: Use a proper directory structure.
...
Fixes <https://bugs.gnu.org/25634 >.
* gnu/packages/python.scm (python-waf): Replace custom 'install phase to
install "waf" binary into the bin directory. Remove the 'wrap phase.
* gnu/packages/video.scm (mpv)[arguments]: Adjust the 'setup-waf phase
accordingly.
2018-11-21 15:20:20 +02:00
96cae1b48c
gnu: font-ubuntu: Update url.
...
* gnu/packages/fonts.scm (font-ubuntu): Use new url, update hash.
2018-11-21 14:06:07 +01:00
ab5d91dd50
gnu: Add python-wikidata.
...
* gnu/packages/python.scm (python-wikidata): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-11-21 11:55:57 +01:00
4e94cdb652
gnu: python-astroid: Update to 2.0.4.
...
* gnu/packages/python.scm (python-astroid): Update to 2.0.4.
[source]: Switch to pypi source.
[native-inputs]: Add python-dateutil, python-nose, python-pytest,
python-pytest-runner.
[arguments]: Add phase to remove spurious test failure. Update custom
'check phase.
(python2-astroid): Update to 1.6.5.
[source]: Use pypi source.
[arguments]: Add phase to remove spurious test failure.
2018-11-21 12:00:01 +02:00
1200783972
gnu: thermald: Clean up package definition.
...
* gnu/packages/admin.scm (thermald)[arguments]: Remove redundant
'bootstrap phase. Remove unnecessary udev configure flag.
2018-11-21 10:13:07 +02:00
d09e84c271
gnu: thermald: Don't use unstable tarball.
...
* gnu/packages/admin.scm (thermald)[source]: Download source using
git-fetch.
2018-11-21 10:13:06 +02:00
56ddcf0414
gnu: emacs-elpy: Update to 1.26.0.
...
* gnu/packages/emacs.scm (emacs-elpy): Update to 1.26.0.
2018-11-20 23:57:58 -05:00
0da3526d58
gnu: u-boot-pine64-plus: Refactor package definition.
...
* gnu/packages/bootloaders.scm (make-u-boot-sunxi64-package): New procedure.
(u-boot-pine64-plus): Use it.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-11-20 23:39:41 +01:00
95d9198606
gnu: arm-trusted-firmware-pine64-plus: Rename variable to arm-trusted-firmware-sun50i-a64.
...
* gnu/packages/firmware (arm-trusted-firmware-pine64-plus): Rename to...
(arm-trusted-firmware-sun50i-a64): ...this.
* gnu/packages/bootloaders (u-boot-pine64-plus)[native-inputs]: Use it.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-11-20 23:34:31 +01:00
725b077e40
gnu: arm-trusted-firmware-pine64-plus: Update to 2.0-1.cabe0a3.
...
* gnu/packages/firmware.scm (arm-trusted-firmware-pine64-plus):
Use platform name from upstream ("sun50i_a64").
[version]: Update to 2.0-1.cabe0a3,
[source](uri): Use upstream git repository.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-11-20 23:32:55 +01:00
be02d4df84
gnu: Add python-django-debug-toolbar.
...
* gnu/packages/django.scm (python-django-debug-toolbar,
python2-django-debug-toolbar): New variables.
2018-11-20 19:48:03 +00:00
a2e9259697
gnu: Add python-django-jinja.
...
* gnu/packages/django.scm (python-django-jinja, python2-django-jinja): New
variables.
2018-11-20 19:48:02 +00:00
6cd1bbd0b1
gnu: Add python-django-pipeline.
...
* gnu/packages/django.scm (python-django-pipeline, python2-django-pipeline):
New variables.
2018-11-20 19:48:02 +00:00
9c98d588c2
gnu: Add python-slimit.
...
* gnu/packages/python-web.scm (python-slimit, python2-slimit): New variables.
2018-11-20 19:48:02 +00:00
90b9c5adea
gnu: Add python-jsmin.
...
* gnu/packages/python-web.scm (python-jsmin, python2-jsmin): New variables.
2018-11-20 19:48:00 +00:00
b3175c709d
gnu: cabextract: Update to 1.9.
...
* gnu/packages/compression.scm (cabextract): Update to 1.9.
[arguments]: Add phase "unpack-libmspack".
[inputs]: Add libmspack-source.
2018-11-20 13:55:10 -05:00
ea80fd1ff5
gnu: libmspack: Update to 0.9.1.
...
* gnu/packages/compression.scm (libmspack): Update to 0.9.1.
2018-11-20 13:53:06 -05:00
3c4103c84f
gnu: java-jansi-native: Add "mips64el-linux" case.
...
* gnu/packages/java.scm (java-jansi-native)[arguments]: Add
"mips64el-linux" in 'match' clause.
2018-11-20 18:39:22 +01:00
e11462c2e4
Revert "gnu: ccl: Include x86-headers and remove missing "contrib" folder."
...
This reverts commit d22ba64276
2018-11-20 18:36:05 +01:00
242b29baa1
gnu: autotalent: Simplify 'license'.
...
* gnu/packages/audio.scm (autotalent)[license]: Remove unnecessary 'list'.
2018-11-20 18:36:05 +01:00
662e2285f5
services: wesnothd: Run as wesnothd user and group.
...
* gnu/services/games.scm (wesnothd-shepherd-service): Run as wesnothd user and
group.
2018-11-20 22:40:44 +05:30
5e369f8ab9
gnu: Add pinentry-efl.
...
* gnu/packages/gnupg.scm (pinentry-efl): New variable.
* gnu/packages/patches/pinentry-efl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-11-20 12:38:57 +02:00
4f70db97a0
Merge branch 'master' into core-updates
2018-11-20 01:14:12 +01:00
9acfe275ad
gnu: Add missing patch to local.mk.
...
This line was removed by accident in 0a41123f01
2018-11-20 01:11:26 +01:00
30f0feff19
gnu: libwebp: Update to 1.0.1.
...
* gnu/packages/image.scm (libwebp): Update to 1.0.1.
2018-11-20 00:57:49 +01:00
7882cc55bc
gnu: fluidsynth: Update to 2.0.2.
...
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.2.
2018-11-20 00:57:49 +01:00
352401efb8
gnu: python-joblib: Update home page.
...
* gnu/packages/python.scm (python-joblib)[home-page]: Update to current.
2018-11-20 00:57:49 +01:00
ff43d95807
gnu: python-joblib: Update to 0.13.0.
...
* gnu/packages/python.scm (python-joblib): Update to 0.13.0.
[source](snippet): Remove.
[arguments]: Remove 'disable-failing-tests' phase. Add custom check phase.
[native-inputs]: Remove PYTHON-NOSE, PYTHON-SPHINX, PYTHON-DOCUTILS and
PYTHON-NUMPYDOC. Add PYTHON-PYTEST.
2018-11-20 00:57:49 +01:00
89d88b8530
gnu: python-natsort: Update to 5.4.1.
...
* gnu/packages/python.scm (python-natsort): Update to 5.4.1.
[arguments]: Add #:modules. Replace 'check' phase with custom pytest
invokation.
[native-inputs]: Remove PYTHON-PYTEST-CACHE, PYTHON-PYTEST-FLAKES and
PYTHON-PYTEST-PEP8. Add PYTHON-PYTEST and PYTHON-PYTEST-MOCK.
(python2-natsort)[native-inputs]: Remove PYTHON2-ENUM34 and PYTHON2-MOCK.
2018-11-20 00:57:48 +01:00
4a4f3e771b
gnu: z3: Update to 4.8.1.
...
* gnu/packages/maths.scm (z3): Update to 4.8.1.
2018-11-20 00:57:48 +01:00
fb525bfd83
gnu: z3: Fetch source using git.
...
* gnu/packages/maths.scm (z3)[source]: Change to GIT-FETCH.
2018-11-20 00:57:48 +01:00
cc661cb348
gnu: xonotic: Symlink to xonotic data instead of copying into xonotic.
...
* gnu/packages/games.scm (xonotic)[arguments]: Modify the phase
'install-data so it creates a symlink to xonotic's data instead of
copying it into the xonotic package.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-19 23:11:38 +01:00
c3276dbecb
gnu: Add autotalent.
...
* gnu/packages/audio.scm (autotalent): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-19 23:11:38 +01:00
887437ee0e
gnu: git-when-merged: Fix license.
...
Reported by Mark H Weaver <mhw@netris.org>.
* gnu/packages/version-control.scm (git-when-merged)[license]: Change to
GPL2+.
2018-11-19 23:11:38 +01:00
4db71841ee
gnu: r-shinyfiles: Update to 0.7.2.
...
* gnu/packages/web.scm (r-shinyfiles): Update to 0.7.2.
2018-11-19 17:20:05 +01:00
0adf04a2d3
gnu: r-mclust: Update to 5.4.2.
...
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.2.
2018-11-19 17:19:44 +01:00
185663e568
gnu: r-openssl: Update to 1.1.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.1.
2018-11-19 17:19:15 +01:00
749872a5ed
gnu: r-biocmanager: Update to 1.30.4.
...
* gnu/packages/cran.scm (r-biocmanager): Update to 1.30.4.
2018-11-19 17:18:41 +01:00
278e0f6506
gnu: r-ggeffects: Update to 0.7.0.
...
* gnu/packages/cran.scm (r-ggeffects): Update to 0.7.0.
2018-11-19 17:18:19 +01:00
fba7dbe76c
gnu: r-sjstats: Update to 0.17.2.
...
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.2.
2018-11-19 17:17:54 +01:00
1659c5dd27
gnu: r-ggpubr: Update to 0.2.
...
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.
2018-11-19 17:17:25 +01:00
e396b37822
gnu: r-recipes: Update to 0.1.4.
...
* gnu/packages/cran.scm (r-recipes): Update to 0.1.4.
2018-11-19 17:17:03 +01:00
e21659c70b
gnu: r-dimred: Update to 0.2.2.
...
* gnu/packages/cran.scm (r-dimred): Update to 0.2.2.
2018-11-19 17:16:35 +01:00
c2e26dc156
gnu: r-ensembldb: Update to 2.6.2.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.2.
2018-11-19 16:46:32 +01:00
e038819138
gnu: r-msnbase: Update to 2.8.1.
...
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.1.
2018-11-19 16:46:00 +01:00
4535a7b0f5
gnu: r-genomeinfodb: Update to 1.18.1.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.1.
2018-11-19 16:33:35 +01:00
5497214d80
gnu: Add clojure-algo-monads.
...
* gnu/packages/lisp.scm (clojure-algo-monads): New public variable.
2018-11-19 12:10:06 +01:00
2cab1d4a7d
gnu: Add clojure-tools-macro.
...
* gnu/packages/lisp.scm (clojure-tools-macro): New public variable.
2018-11-19 12:09:53 +01:00
eea5530c9f
gnu: Add clojure-algo-generic.
...
* gnu/packages/lisp.scm (clojure-algo-generic): New public variable.
2018-11-19 12:09:39 +01:00
c784ffa0c4
gnu: Add clojure-core-match.
...
* gnu/packages/lisp.scm (clojure-core-match): New public variable.
2018-11-19 12:09:15 +01:00
d2a659e5bf
gnu: Add clojure-instaparse.
...
* gnu/packages/lisp.scm (clojure-instaparse): New public variable.
2018-11-19 12:08:26 +01:00
53f316ab90
guix: Add clojure-utils.
...
* guix/build/clojure-utils.scm: New file.
* gnu/packages/lisp.scm (clojure)[arguments]: Use it.
* Makefile.am (MODULES): Add it.
2018-11-19 12:05:19 +01:00
d0ad97115a
gnu: clojure: Use (guix build java-utils) to simplify build phases.
...
* gnu/packages/lisp.scm (clojure)[arguments]: Use 'ant-build-javadoc',
'install-jars' and 'install-javadoc' in build phases.
2018-11-19 12:02:26 +01:00
8da9187a5a
gnu: clojure: Refactor to ensure there's a single list of libraries.
...
This avoids having to update multiple lists.
* gnu/packages/lisp.scm (clojure)[native-inputs]: Use new local variable.
[arguments]: Adjust build phases accordingly.
2018-11-19 12:02:09 +01:00
df0a180421
gnu: clojure: Remove 'remove-archives' snippet.
...
This is no longer needed since clojure now makes official source releases
in github.
* gnu/packages/lisp.scm (clojure)[source]: Remove it.
[native-inputs]: Remove it in 'submodule'.
[arguments]: Adjust 'unpack-submodule-sources' phase accordingly.
2018-11-19 12:01:48 +01:00
28e32b14e4
gnu: clojure: Move from java to lisp.
...
* gnu/packages/java.scm (clojure): Move from here...
* gnu/packages/lisp.scm (clojure): ...to here.
2018-11-19 12:01:25 +01:00
f4ee41c960
gnu: python-kivy: Update to 1.10.1
...
* gnu/packages/python.scm (python-kivy): Update to 1.10.1.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-19 09:59:08 +01:00
5e9ce98af7
gnu: help2man: Add 1.47.8.
...
* gnu/packages/man.scm (help2man/latest): New variable.
2018-11-19 09:59:08 +01:00
1372754dc0
gnu: fuse-exfat: Update to 1.3.0.
...
* gnu/packages/linux.scm (fuse-exfat): Update to 1.3.0.
2018-11-19 09:59:08 +01:00
c39f3e1c43
gnu: diffoscope: Update to 105.
...
* gnu/packages/package-management.scm (diffoscope): Update to 105.
2018-11-19 09:59:07 +01:00
5c40a69f71
gnu: Add libfdk 'FDK AAC' library.
...
* gnu/packages/audio.scm (libfdk): New variable.
2018-11-18 18:19:34 -05:00
8bff7dc2ad
vm: Remove explicit calls to 'operating-system-derivation'.
...
* gnu/system/vm.scm (iso9660-image): Change 'os-drv' to 'os' and remove
call to 'operating-system-derivation'.
(system-qemu-image): Likewise.
(system-qemu-image/shared-store): Likewise.
2018-11-18 23:37:45 +01:00
9782c82217
system: De-monadify 'operating-system-bootcfg'.
...
* gnu/system.scm (operating-system-bootcfg): Remove 'mlet*' and
'lower-object' call.
* gnu/system/vm.scm (system-disk-image)
(system-qemu-image/shared-store): Adjust accordingly.
* guix/scripts/system.scm (perform-action): Add 'lower-object' call for
BOOTCFG.
2018-11-18 23:37:45 +01:00
5ece56dc73
system: Please Emacs.
...
* gnu/system.scm (operating-system-bootcfg): Remove opening parenthesis
at the beginning of the line in the docstring to placate Emacs.
2018-11-18 23:37:44 +01:00
35b4468127
system: De-monadify 'operating-system-boot-parameters'.
...
* gnu/system.scm (operating-system-boot-parameters): Turn to direct
style instead of monadic.
(operating-system-bootcfg): Adjust accordingly.
(operating-system-boot-parameters-file): Likewise.
2018-11-18 23:37:44 +01:00
e34ae75dc1
linux-initrd: Return file-like objects instead of monadic values.
...
This is an incompatible change visible to users via the 'initrd' field
of 'operating-system'. However, assuming the user's 'initrd' value
tail-calls to 'raw-initrd' or 'base-initrd', the switch to non-monadic
style is invisible.
* gnu/system/linux-initrd.scm (expression->initrd): Use 'computed-file'
instead of 'gexp->derivation'.
(raw-initrd, base-initrd): Adjust docstring to mention non-monadic
return.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Adjust
accordingly.
* gnu/system.scm (operating-system-directory-base-entries)
(operating-system-initrd-file)
(operating-system-boot-parameters): Adjust accordingly.
* doc/guix.texi (operating-system Reference)
(Initial RAM Disk): Update.
2018-11-18 23:37:44 +01:00
a7ef45d9de
system: Simplify kernel argument handling.
...
* gnu/system.scm (bootable-kernel-arguments): Remove 'kernel-arguments'
parameter and return only the base list of kernel arguments. Rename
'system.drv' to 'system'.
(operating-system-kernel-arguments): Adjust accordingly and remove
'system.drv' parameter.
(read-boot-parameters-file): Adjust accordingly. Remove 'if params'
since dominating code assumed PARAMS is always true.
(operating-system-boot-parameters): Remove 'system.drv' parameter; add
#:system-kernel-arguments? instead and honor it.
(operating-system-bootcfg): Adjust accordingly.
(operating-system-boot-parameters-file): Likewise.
* gnu/system/vm.scm (system-qemu-image/shared-store-script): Remove
'os-drv' variable. Adjust call to 'operating-system-kernel-arguments'.
2018-11-18 23:37:44 +01:00
46c296dcc4
bootloader: De-monadify configuration file generators.
...
* gnu/bootloader/extlinux.scm: Remove unneeded imports.
(extlinux-configuration-file): Use 'computed-file' instead of
'gexp->derivation'.
* gnu/bootloader/grub.scm (svg->png): Likewise.
(grub-background-image, eye-candy): Adjust accordingly, return
non-monadically.
(grub-configuration-file): Likewise, and use 'computed-file' instead of
'gexp->derivation'.
* gnu/bootloader/u-boot.scm: Remove unneeded imports.
* gnu/system.scm: Add 'lower-object' call.
2018-11-18 23:37:44 +01:00
b297934437
activation: Aways pass '-d HOME' to 'useradd'.
...
Fixes <https://bugs.gnu.org/33422 >.
Reported by fps.
* gnu/build/activation.scm (add-user): Always pass "-d HOME" when HOME
is true. Pass "--create-home" only when HOME, CREATE-HOME?, and SYSTEM?
are true.
(activate-users+groups): Pass #:create-home? create-home? to
'ensure-user'.
* gnu/tests/base.scm (run-basic-test)["accounts"]: Test 'passwd:dir' as
well.
2018-11-18 23:37:25 +01:00
2d546858b1
gnu: hurd: Build against glibc 2.28.
...
Version 2.28 of glibc is the first in a long time that fully supports
GNU/Hurd. This change updates the Hurd and Mach to provide the features
glibc 2.28 expects and adjusts the cross-compilation tool chain for
"i586-pc-gnu".
* gnu/packages/base.scm (glibc/linux): Rename to...
(glibc): ... this.
[propagated-inputs]: Add 'hurd-target?' case.
[arguments]: Use '--disable-werror' when 'hurd-target?'. Add
'augment-libc.so' phase when 'hurd-target?'.
[native-inputs]: Add MIG and PERL when 'hurd-target?'.
(glibc/hurd, glibc-for-target): Remove
(glibc/hurd-headers): Inherit from GLIBC, not GLIBC/HURD.
[arguments]: Remove "--enable-obsolete-rpc" configure flag and
'patch-configure-script' phase.
* gnu/packages/cross-base.scm (cross-kernel-headers)[xglibc/hurd-headers]:
Move 'set-cross-headers-path' after 'unpack'.
* gnu/packages/cross-base.scm (cross-libc)[cross-libc-for-target]:
Remove.
Pass "--disable-werror" when TARGET matches 'hurd-triplet?'.
* gnu/packages/hurd.scm (hurd-target?, patch-url): New procedures.
(gnumach-headers)[source](patches, modules, snippet): New fields.
(hurd-headers): Use Git commit 98b3390.
[native-inputs]: Add AUTOCONF and AUTOMAKE.
[arguments]: Add "ac_cv_func_*" configure flags.
(hurd-minimal)[native-inputs]: Remove.
[arguments]: In 'build' phase, build "include/assert-backtrace.h"
first.
2018-11-18 23:12:36 +01:00
564cf93f2a
gnu: ocaml: Update to 4.7.0.
...
Update ocaml to the latest version and fixes dependent packages by
updating them or by adding new inputs, such as ocaml-num and ocamlbuild,
that were removed from the core ocaml package. Rename packages that
cannot be built with the new compiler with an ocaml4.02 prefix. Add
ocaml4.02 dependencies.
* gnu/packages/ocaml.scm (ocaml): Update to 4.7.0.
(ocaml-4.02, ocamlbuild, camlp4-4.02, ocaml-num, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit, ocaml4.02-camlzip)
(ocaml4.02-ocamlmod, ocaml4.02-zarith, ocaml4.02-qcheck, ocaml4.02-qtest)
(ocaml4.02-stringext, ocaml4.02-bisect, dune, ocaml-migrate-parsetree)
(ocaml-ppx-tools-versioned, ocaml-ppx-tools-versioned)
(ocaml4.02-bitstring, ocaml4.02-result, ocaml4.02-topkg, ocaml4.02-rresult)
(ocaml4.02-sqlite3, ocaml4.02-csv, ocaml4.02-mtime, ocaml4.02-cmdliner)
(ocaml4.02-fmt, ocaml4.02-astring, ocaml4.02-alcotest, ocaml4.02-ppx-tools)
(ocaml4.02-react, ocaml4.02-ssl, ocaml4.02-lwt, ocaml-lwt-log)
(ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath, ocaml4.02-bos)
(ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar, ocaml4.02-uutf)
(ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64, ocaml4.02-omake)
(ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-cppo, ocaml-seq, ocaml4.02-seq)
(ocaml4.02-re, ocaml4.02-ocplib-endian, ocaml4.02-easy-format)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): New packages.
(opam): Update to 2.0.0.
(camlp4): Update to 4.07+1.
(camlp5): Update to 7.06.
(hevea): Update to 2.32.
(coq)[inputs]: Add ocaml-num.
(emacs-tuareg): Update to 2.2.0.
(ocaml-menhir)[native-inputs]: Add ocamlbuild.
(ocaml-lablgtk): Update to 2.18.6.
(unison)[inputs]: Use ocaml-4.02.
(ocaml-findlib): Update to 1.8.0.
(ocaml-ounit)[native-inputs]: Add ocamlbuild.
(ocamlmod): Update to 0.0.9.
(ocaml-frontc)[arguments]: Use ocaml-4.02.
(ocaml-qcheck)[native-inputs]: Add ocamlbuild.
(ocaml-qtest)[native-inputs]: Remove ocaml-findlib and add ocamlbuild.
(ocaml-stringext)[native-inputs]: Add ocamlbuild.
(ocaml-bisect): Update to 1.3.1.
(ocaml4.01-bisect): Downgrade to 1.3.
(ocaml-bitstring): Update to 3.1.0.
(ocaml-topkg)[native-inputs]: Add ocamlbuild.
(ocaml-rresult)[native-inputs]: Add ocamlbuild.
(ocaml-sqlite3)[native-inputs]: Add ocamlbuild.
(ocaml-csv)[native-inputs]: Add ocamlbuild.
(ocaml-mtime)[native-inputs]: Add ocamlbuild.
(ocaml-cmdliner)[native-inputs]: Add ocamlbuild.
(ocaml-fmt)[native-inputs]: Add ocamlbuild.
(ocaml-astring)[native-inputs]: Add ocamlbuild.
(ocaml-alcotest)[native-inputs]: Add ocamlbuild.
(ocaml-ppx-tools)[native-inputs]: Add ocamlbuild.
(ocaml-react)[native-inputs]: Add ocamlbuild.
(ocaml-ssl)[arguments]: Return #t in phases.
(ocaml-lwt): Update to 4.1.0.
(ocaml-logs)[native-inputs]: Add ocamlbuild.
(ocaml-fpath)[native-inputs]: Add ocamlbuild.
(ocaml-bos)[native-inputs]: Add ocamlbuild.
(ocaml-xmlm): Update to 1.3.0.
(ocaml-ulex): Update to 1.2.0.
(ocaml-uchar)[native-inputs]: Add ocamlbuild.
(ocaml-uutf): Update to 1.0.1.
(ocaml-jsonm): Update to 1.0.1.
(ocaml-ocurl): Update to 0.8.2.
(ocaml-base64)[native-inputs]: Add ocamlbuild.
(ocamlify)[native-inputs]: Use ocaml-4.02.
(omake): Update to 0.10.3.
(ocaml-batteries): Update to 2.9.0.
(ocaml-pcre)[native-inputs]: Add ocamlbuild.
(ocaml-expect): Update 0.0.6.
(ocaml4.02-fileutils): Update to 0.5.3.
(ocaml-oasis): Update 0.4.11.
(ocaml-js-build-tools)[native-inputs]: Add ocamlbuild.
(ocaml-bin-prot): Rename to ocaml4.02-bin-prot.
(ocaml-fieldslib): Rename to ocaml4.02-fieldslib.
(ocaml-ppx-core): Rename to ocaml4.02-ppx-core.
(ocaml-ppx-optcomp): Rename to ocaml4.02-ppx-optcomp.
(ocaml-ppx-driver): Rename to ocaml4.02-ppx-driver.
(ocaml-cppo): Update to 1.6.5.
(ocaml-ppx-deriving): Rename to ocaml4.02-ppx-deriving.
(ocaml-ppx-type-conv): Rename to ocaml4.02-ppx-type-conv.
(ocaml-ppx-inline-test): Rename to ocaml4.02-ppx-inline-test.
(ocaml-ppx-bench): Rename to ocaml4.02-ppx-bench.
(ocaml-ppx-compare): Rename to ocaml4.02-ppx-compare.
(ocaml-sexplib): Rename to ocaml4.02-sexplib.
(ocaml-typerep): Rename to ocaml4.02-typerep.
(ocaml-variantslib): Rename to ocaml4.02-variantslib.
(ocaml-ppx-sexp-conv): Rename to ocaml4.02-ppx-sexp-conv.
(ocaml-ppx-variants-conv): Rename to ocaml4.02-ppx-variants-conv.
(ocaml-ppx-here): Rename to ocaml4.02-ppx-here.
(ocaml-ppx-assert): Rename to ocaml4.02-ppx-assert.
(ocaml-ppx-enumerate): Rename to ocaml4.02-ppx-enumerate.
(ocaml-ppx-let): Rename to ocaml4.02-ppx-let.
(ocaml-ppx-typerep-conv): Rename to ocaml4.02-ppx-typerep-conv.
(ocaml-ppx-sexp-value): Rename to ocaml4.02-ppx-sexp-value.
(ocaml-ppx-pipebang): Rename to ocaml4.02-ppx-pipebang.
(ocaml-ppx-bin-prot): Rename to ocaml4.02-ppx-bin-prot.
(ocaml-ppx-fail): Rename to ocaml4.02-ppx-fail.
(ocaml-ppx-custom-printf): Rename to ocaml4.02-ppx-custom-printf.
(ocaml-ppx-sexp-message): Rename to ocaml4.02-ppx-sexp-message.
(ocaml-ppx-fields-conv): Rename to ocaml4.02-ppx-fields-conv.
(ocaml-re): Update to 1.8.0.
(ocaml-ppx-expect): Rename to ocaml4.02-ppx-expect.
(ocaml-ppx-jane): Rename to ocaml4.02-ppx-jane.
(ocaml-core-kernel): Rename to ocaml4.02-core-kernel.
(ocaml-async-kernel): Rename to ocaml4.02-async-kernel.
(ocaml-async-rpc-kernel): Rename to ocaml4.02-async-rpc-kernel.
(ocaml-core): Rename to ocaml4.02-core.
(ocaml-async-unix): Rename to ocaml4.02-async-unix.
(ocaml-async-extra): Rename to ocaml4.02-async-extra.
(ocaml-async): Rename to ocaml4.02-async.
(ocaml-ocplib-endian)[native-inputs]: Update to 1.0.
(ocaml-cstruct): Rename to ocaml4.02-cstruct.
(ocaml-hex): Rename to ocaml4.02-hex.
(ocaml-ezjsonm): Rename to ocaml4.02-ezjsonm.
(ocaml-uri): Rename to ocaml4.02-uri.
(optcomp): Use ocaml-4.02.
(ocaml-piqilib): Update to 0.6.14.
(ocaml-uuidm)[native-inputs]: Add ocamlbuild.
(ocaml-graph): Update to 1.8.8.
(ocaml-piqi): Update to 0.7.6.
(bap): Update to 1.3.0.
(ocaml-camomile): Update to 1.0.1.
(ocaml-jbuilder): Use ocaml-4.02.
(ocaml-lambda-term): Update to 1.13.
(ocaml-utop): Update to 2.2.0.
(ocaml-integers)[native-inputs]: Add ocamlbuild.
(ocaml-ctypes): Update to 0.14.0.
(ocaml-ocb-stubblr)[native-inputs]: Add ocamlbuild.
(ocaml-tsdl)[native-inputs]: Add ocamlbuild.
* gnu/packages/machine-learning.scm (ocaml-mcl): Use ocaml-4.02.
* gnu/packages/maths.scm (cubicle): Update to 1.1.2.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
Update patch.
* guix/build-system/ocaml.scm: (default-ocaml4.02, default-ocaml4.02-findlib)
(package-with-ocaml4.02, strip-ocaml4.02-variant): New variables.
2018-11-18 18:51:08 +01:00
1472d19abf
gnu: maxima: Fix tests on i686 and x86_64.
...
* gnu/packages/maths.scm (maxima)[arguments]: Replace check phase.
2018-11-18 11:58:38 -05:00
8504d19222
gnu: spice: Run tests sequentially.
...
* gnu/packages/spice.scm (spice)[arguments]: Add #:parallel-tests?.
2018-11-18 12:28:34 +01:00
af50b4abc0
gnu: qt@5: Fix build failure on glibc 2.28.
...
* gnu/packages/patches/qt-5-renameat2.patch: New file.
* gnu/packages/qt.scm (qt)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-18 12:28:34 +01:00
774f8bbeb1
gnu: linkchecker: Use 'git-file-name' for the source.
...
* gnu/packages/web.scm (linkchecker)[source]: Add missing 'file-name'
field.
2018-11-18 11:57:44 +02:00
74854d11ce
gnu: python-pytest-localserver: Update to 0.5.0.
...
* gnu/packages/check.scm (python-pytest-localserver): Update to 0.5.0.
2018-11-18 11:42:35 +02:00
45a2346f32
gnu: python-pytest-localserver: Fix test suite.
...
* gnu/packages/check.scm (python-pytest-localserver): Replace custom
'check phase.
2018-11-18 11:42:23 +02:00
d22ba64276
gnu: ccl: Include x86-headers and remove missing "contrib" folder.
...
* gnu/packages/lisp.scm (ccl): Include x86-headers and remove missing "contrib" folder.
2018-11-18 10:39:47 +01:00
e005ddc223
gnu: libgtextutils: Re-instate custom bootstrap phase.
...
The source lacks a standard bootstrap script so the bootstrap phase is
skipped otherwise.
* gnu/packages/textutils.smc (libgtextutils)[arguments]: Replace
'bootstrap phase with upstream's bootstrap phase.
2018-11-18 10:18:47 +02:00
f8cba3ff4f
gnu: mesa: Stay on RTTI-less LLVM.
...
* gnu/packages/llvm.scm (llvm-without-rtti): New public variable.
* gnu/packages/gl.scm (mesa)[inputs]: Use that instead of LLVM.
2018-11-17 22:54:03 +01:00
bc9aa60bd5
gnu: nss: Make tests deterministic.
...
Tests would fail once certificates had expired, along these lines:
chains.sh: Verifying certificate(s) PayPalEE.cert with flags -d AllDB -pp -o OID.2.16.840.1.114412.1.1
vfychain -d AllDB -pp -vv -o OID.2.16.840.1.114412.1.1 /tmp/guix-build-nss-3.39.drv-0/nss-3.39/nss/tests/libpkix/certs/PayPalEE.cert
Chain is bad!
PROBLEM WITH THE CERT CHAIN:
CERT 0. PayPalEE :
ERROR -8181: Peer's Certificate has expired.
Returned value is 1, expected result is pass
Using 'faketime' allows us to get deterministic results.
* gnu/packages/gnuzilla.scm (nss)[arguments]: In 'check' phase, run
'all.sh' under 'faketime'.
[native-inputs]: Add LIBFAKETIME.
2018-11-17 19:02:18 +01:00
85b28320d4
gnu: Add libfaketime.
...
* gnu/packages/check.scm (libfaketime): New variable.
2018-11-17 17:40:55 +01:00
0a41123f01
gnu: Add ClamAV.
...
* gnu/packages/antivirus.scm: New file.
* gnu/packages/patches/clamav-system-tomsfastmath.patch,
gnu/packages/patches/clamav-config-llvm-libs.patch: New files.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new module.
(dist_patch_DATA): Add patches.
Co-authored-by: Christopher Baines <mail@cbaines.net>
2018-11-17 00:20:44 -06:00
7ed018e8a2
gnu: Add TomsFastMath.
...
* gnu/packages/multiprecision.scm (tomsfastmath): New variable.
* gnu/packages/patches/tomsfastmath-constness.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-17 00:20:44 -06:00
fc9dbf4131
llvm: Build with RTTI by default.
...
Increases size of llvm@6 by 2.5MiB (2.5%), but saves building specialized
llvm's with rtti enabled for packages that require RTTI when linking with the
llvm libraries.
* gnu/packages/llvm.scm (llvm-3.8-with-rtti): Remove variable.
(llvm)[arguments]: Add '-DLLVM_REQUIRES_RTTI=1' to #:configure-flags.
* gnu/packages/audio.scm (faust-2)[native-inputs]:
'llvm-3.8-with-rtti' -> 'llvm-3.8'.
2018-11-17 00:19:53 -06:00
0c7707d53e
gnu: u-boot: Update to 2018.11.
...
* gnu/packages/bootloaders.scm (u-boot): Update to 2018.11.
(u-boot)[native-inputs]: Add lz4.
2018-11-17 00:16:29 +01:00
243bdcc12e
gnu: Add git-when-merged.
...
* gnu/packages/version-control.scm (git-when-merged): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-16 23:11:40 +01:00
7a44e8752e
gnu: Add caps-plugins-lv2.
...
* gnu/packages/audio.scm (caps-plugins-lv2): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-16 23:09:00 +01:00
a7b7d48cc7
gnu: tiled: Update to 1.2.1.
...
* gnu/packages/game-development.scm (tiled): Update to 1.2.1.
2018-11-16 10:34:29 -05:00
2aee2a96b6
guile: newt: Update revision to 2.
...
* gnu/packages/guile.scm (guile-newt): Update revision to 2.
2018-11-16 17:42:07 +09:00
eea7cd7519
gnu: Add cmh.
...
* gnu/packages/algebra.scm (cmh): New variable.
2018-11-16 09:06:31 +01:00
44ff80fc0e
gnu: gp2c: Update to 0.0.11pl1.
...
* gnu/packages/algebra.scm (gp2c): Update to 0.0.11pl1.
2018-11-16 08:48:47 +01:00
03592a6f88
gnu: emacs-realgud: Patch configure.ac to repair the build.
...
This fixes https://bugs.gnu.org/33196 , a build problem caused by a defective
Elisp snippet in a check in configure.ac.
* gnu/packages/patches/emacs-realgud-fix-configure-ac.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs.scm (emacs-realgud)[source]: Use it.
2018-11-15 22:42:35 -05:00
30f0d21b40
gnu: Add nanopolish.
...
* gnu/packages/bioinformatics.scm (nanopolish): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2018-11-15 22:23:57 +01:00
2d86eaff5b
gnu: sambamba: Update to 0.6.8.
...
* gnu/packages/bioinformatics.scm (sambamba): Update to 0.6.8.
2018-11-15 13:09:01 +01:00
2e0f69057a
gnu: bioinformatics: Return #t from all phases and snippets.
...
* gnu/packages/bioinformatics.scm (bamtools, ribotaper, bioawk)
(codingquarry, fraggenescan, minced, pplacer, star, subread, sailfish)
(salmon): Return #t from all phases and snippets, use 'invoke' where
appropriate, and remove vestigal plumbing.
2018-11-14 23:44:18 -05:00
96272e2822
gnu: databases: Return #t from all phases.
...
* gnu/packages/databases.scm (4store, go-gopkg.in-mgo.v2, mongodb)
(sparql-query, tdb, sqlcipher, python-sqlparse, mongo-tools): Return #t from
all phases, use invoke where appropriate, and remove vestigial plumbing.
2018-11-14 23:44:16 -05:00
9f6f726c7f
gnu: compression: Return #t from all phases.
...
* gnu/packages/compression.scm (perl-compress-raw-zlib, java-snappy)
(java-iq80-snappy, pzstd, java-tukaani-xz): Return #t from all phases.
2018-11-14 23:44:14 -05:00
29594404a1
gnu: check: Return #t from all phases.
...
* gnu/packages/check.scm (cmdtest, python-pytest-cov, python-fixtures)
(python-pytest-localserver, python-pytest-flakes)
(python2-coverage-test-runner, python-pylint, python-behave-web-api):
Return #t from all phases, and use invoke where appropriate.
2018-11-14 23:44:12 -05:00
ee527187a6
gnu: audio: Return #t from all phases.
...
* gnu/packages/audio.scm (clalsadrv, jack-2, libsbsms, zita-convolver)
(zita-resampler, zita-alsa-pcmi, gsm, cava): Return #t from all phases.
(ladspa): Use 'modify-phases'. Return #t from all phases.
2018-11-14 23:44:10 -05:00
c6bf07d14a
gnu: xorg: Return #t from all phases.
...
* gnu/packages/xorg.scm (xcompmgr)
* gnu/packages/xdisorg.scm (xdotool, scrot, unclutter, xscreensaver)
(tint2, nxbelld, xautolock): Return #t from all phases.
2018-11-14 23:44:08 -05:00
aa6f87a2b9
gnu: xml: Return #t from all phases.
...
* gnu/packages/xml.scm (python-libxml2, perl-xml-sax, xlsx2csv, libxls)
(java-kxml2): Return #t from all phases.
2018-11-14 23:44:06 -05:00
9dcfd6aac9
gnu: video: Return #t from all phases.
...
* gnu/packages/video.scm (youtube-dl-gui, avidemux, xvid, twitchy, aegisub):
Return #t from all phases, use invoke where appropriate, and remove vestigial
plumbing.
2018-11-14 23:44:04 -05:00
4851af9ebe
gnu: perl: Return #t from all phases.
...
* gnu/packages/gd.scm (perl-gd-securityimage)
* gnu/packages/libevent.scm (perl-ev)
* gnu/packages/markup.scm (perl-text-markdown-discount)
* gnu/packages/perl-check.scm (perl-test2-bundle-extended)
* gnu/packages/perl.scm (perl-digest-md5, perl-encode-hanextra)
(perl-ipc-run, perl-pathtools)
* gnu/packages/photo.scm (perl-image-exiftool): Return #t from all phases.
2018-11-14 23:44:02 -05:00
366c1cbbc6
gnu: networking: Return #t from all phases.
...
* gnu/packages/networking.scm (miredo, tcp-wrappers, librdkafka, ifstatus)
(iodine, httpstat, perl-socket6, perl-netaddr-ip, libproxy, openvswitch)
(libnet, asio): Return #t from all phases.
2018-11-14 23:43:59 -05:00
9922278b25
gnu: linux: Return #t from all phases.
...
* gnu/packages/linux.scm (iproute, ntfs-3g, cpupower, radeontop, tlp):
Return #t from all phases.
2018-11-14 23:43:57 -05:00
fccacffbf4
gnu: image: Return #t from all phases.
...
* gnu/packages/image.scm (libpng-apng, pngcrush, leptonica, zimg)
(perceptualdiff): Return #t from all phases.
2018-11-14 23:43:54 -05:00
cb8ba848d2
gnu: admin: Return #t from all phases.
...
* gnu/packages/admin.scm (daemon-tools, rottlog, wpa-supplicant-minimal)
(wakelan, cpulimit, nmap, sunxi-tools): Return #t from all phases.
2018-11-14 23:43:48 -05:00
7413c31693
gnu: linux-libre: Update to 4.19.2.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.19.2.
(%linux-libre-hash): Update hash.
2018-11-14 19:16:24 -05:00
24ba798731
gnu: linux-libre@4.14: Update to 4.14.81.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.81.
(%linux-libre-4.14-hash): Update hash.
2018-11-14 19:14:39 -05:00
6a1cff70bc
gnu: linux-libre@4.9: Update to 4.9.137.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.137.
2018-11-14 19:13:46 -05:00
21f7d88e7a
gnu: texlive-bin: Fix substitution regexp.
...
This is a followup to commit be200ef316
2018-11-14 23:49:19 +01:00
ae0f1dd1a4
gnu: Add fenics.
...
* gnu/packages/simulation.scm (fenics): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:09 +01:00
0ace6c0b84
gnu: Add fenics-dolfin.
...
* gnu/packages/simulation.scm (fenics-dolfin): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:09 +01:00
6b7f1f8afa
gnu: Add python-fenics-ffc.
...
* gnu/packages/simulation.scm (python-fenics-ffc): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:09 +01:00
0fc499834f
gnu: Add python-fenics-fiat.
...
* gnu/packages/simulation.scm (python-fenics-fiat): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
3941cf5afa
gnu: Add python-fenics-ufl.
...
* gnu/packages/simulation.scm (python-fenics-ufl): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
f7a4757a4c
gnu: Add python-fenics-dijitso.
...
* gnu/packages/simulation.scm (python-fenics-dijitso): New varaible.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
6b5687d053
gnu: Add python-slepc4py.
...
* gnu/packages/maths.scm (python-slepc4py): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
90ff287401
gnu: Add python-petsc4py.
...
* gnu/packages/maths.scm (python-petsc4py): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
54fcd547b3
gnu: Add python-mpi4py.
...
* gnu/packages/mpi.scm (python-mpi4py): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-14 21:34:08 +01:00
7a54b2281d
gnu: guix-daemon: Install 'guix-authenticate'.
...
Fixes <https://bugs.gnu.org/33368 >.
Reported by Konrad Hinsen <konrad.hinsen@fastmail.net>.
* gnu/packages/package-management.scm (guix-daemon)[arguments]: In
'install' phase, build "install-nodist_libexecSCRIPTS" target to install
'guix-authenticate'.
2018-11-14 21:34:08 +01:00
79ee97a144
Merge branch 'master' into core-updates
2018-11-14 21:20:46 +01:00
7d9d521fbc
gnu: aide: Provide libpcre.a and libz.a.
...
* gnu/packages/admin.scm (aide)[inputs]: Add PCRE:STATIC and ZLIB:STATIC.
2018-11-14 21:07:01 +01:00
e921993c25
gnu: xf86-video-r128: Update to 6.12.0.
...
* gnu/packages/xorg.scm (xf86-video-r128): Update to 6.12.0.
2018-11-14 21:05:30 +01:00
24dd6ec38a
gnu: mtools: Update to 4.0.20.
...
* gnu/packages/mtools.scm (mtools): Update to 4.0.20.
[source](uri): Change to 'bz2' compressed tarball.
2018-11-14 21:05:30 +01:00
7939387da8
gnu: nano: Update to 3.2.
...
* gnu/packages/nano.scm (nano): Update to 3.2.
2018-11-14 21:05:30 +01:00
d63f588486
gnu: sudo: Update to 1.8.26.
...
* gnu/packages/admin.scm (sudo): Update to 1.8.26.
2018-11-14 21:05:30 +01:00
bac2974e86
gnu: feh: Update to 3.0.
...
* gnu/packages/image-viewers.scm (feh): Update to 3.0.
2018-11-14 21:05:30 +01:00
ee66a13563
gnu: Add jamm.
...
* gnu/packages/bioinformatics.scm (jamm): New variable.
2018-11-14 15:13:20 +01:00
e4f4a04a51
gnu: Add r-ouch.
...
* gnu/packages/cran.scm (r-ouch): New variable.
2018-11-14 15:13:20 +01:00
10483a64ee
gnu: Add r-activity.
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* gnu/packages/cran.scm (r-activity): New variable.
2018-11-14 15:13:20 +01:00
3cef715a46
gnu: Add r-circular.
...
* gnu/packages/cran.scm (r-circular): New variable.
2018-11-14 15:13:20 +01:00
08bf097a0b
gnu: Add r-overlap.
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* gnu/packages/cran.scm (r-overlap): New variable.
2018-11-14 15:13:20 +01:00
acbf23da44
gnu: Add r-acdm.
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* gnu/packages/cran.scm (r-acdm): New variable.
2018-11-14 15:13:20 +01:00
ffdeda3ce0
gnu: Add r-acd.
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* gnu/packages/cran.scm (r-acd): New variable.
2018-11-14 15:13:20 +01:00
488dc4e1e2
gnu: Add r-abn.
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* gnu/packages/cran.scm (r-abn): New variable.
2018-11-14 15:13:20 +01:00
0c92f3734e
gnu: Add r-rjags.
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* gnu/packages/cran.scm (r-rjags): New variable.
2018-11-14 15:13:20 +01:00
0bca8643a2
gnu: Add jags.
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* gnu/packages/statistics.scm (jags): New variable.
2018-11-14 15:13:17 +01:00
51b262f310
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.4.
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* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Update to 3.4.4.
2018-11-13 23:34:40 +01:00
d34959b8d4
gnu: r-org-mm-eg-db: Update to 3.7.0.
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* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Update to 3.7.0.
2018-11-13 23:34:40 +01:00
314511b862
gnu: r-org-dm-eg-db: Update to 3.7.0.
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* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Update to 3.7.0.
2018-11-13 23:34:39 +01:00
76bd16bcf6
gnu: r-org-ce-eg-db: Update to 3.7.0.
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* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Update to 3.7.0.
2018-11-13 23:34:39 +01:00
fc7683fa30
gnu: r-org-hs-eg-db: Update to 3.7.0.
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* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Update to 3.7.0.
2018-11-13 23:34:39 +01:00
cb9e6ed702
gnu: r-genomationdata: Update to 1.14.0.
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* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.14.0.
2018-11-13 23:34:39 +01:00
13e70f6304
gnu: r-go-db: Update to 3.7.0.
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* gnu/packages/bioinformatics.scm (r-go-db): Update to 3.7.0.
2018-11-13 23:34:39 +01:00
13a574652b
gnu: r-genomeinfodbdata: Update to 1.2.0.
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* gnu/packages/bioinformatics.scm (r-genomeinfodbdata): Update to 1.2.0.
2018-11-13 23:34:39 +01:00
3f995aaf21
gnu: spice-vdagent: Fix typo in desktop file.
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Fixes <https://bugs.gnu.org/33346 >.
* gnu/packages/spice.scm (spice-vdagent)[arguments]: Fix typo in
'patch-spice-vdagent.desktop' phase.
2018-11-13 15:26:30 -05:00
c991806a7d
gnu: ImageMagick: Update to 6.9.10-14.
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* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-14.
2018-11-14 03:09:37 +08:00
d540137509
gnu: libssh: Fetch source over HTTPS.
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* gnu/packages/ssh.scm (libssh)[source]: Use HTTPS URL.
2018-11-13 11:43:35 -05:00
978d59737a
gnu: direnv: Build with Go 1.9.
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* gnu/packages/shellutils.scm (direnv)[native-inputs]: Remove go.
[inputs]: Add go-1.9.
2018-11-13 11:28:23 -05:00
021bf6af18
gnu: Poppler: Fix CVE-2018-19149.
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* gnu/packages/patches/poppler-CVE-2018-19149.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler/fixed): New variable.
(poppler-qt4, poppler-qt5): Use package/inherit.
2018-11-13 11:28:23 -05:00
8263b9f71f
gnu: certbot, python-acme: Update to 0.28.0.
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* gnu/packages/tls.scm (certbot, python-acme): Update to 0.28.0.
2018-11-13 10:10:42 -05:00
3483f82413
gnu: guix: Update to f5a2724.
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* gnu/packages/package-management.scm (guix): Update to f5a2724
2018-11-13 15:44:25 +01:00
Pierre Neidhardt