Commit Graph

481 Commits

Author SHA1 Message Date
Eric Bavier 3f5e6ccf9b
slepc: Upgrade to 3.9.2.
* gnu/packages/maths.scm (slepc): Upgrade to 3.9.2.
2018-09-05 08:10:38 -05:00
Eric Bavier c15be1280e
petsc: Upgrade to 3.9.3.
* gnu/packages/maths.scm (petsc): Upgrade to 3.9.3.
[arguments]: Remove unnecessary configure flags.
2018-09-05 08:10:37 -05:00
Eric Bavier a3a99e27bb
petsc: Move example code to "examples" output.
* gnu/packages/maths.scm (petsc)[arguments]: New 'move-examples' phase.
2018-09-05 08:10:37 -05:00
Eric Bavier b26e4f26ff
gnu: Add SUNDIALS.
* gnu/packages/maths.scm (sundials, sundials-openmpi): New variables.
2018-09-05 08:10:31 -05:00
Paul Garlick 71ca16b58d
gnu: petsc-openmpi: Configure with support for hdf5 data format.
* gnu/packages/maths.scm (petsc-openmpi)[inputs]: Add
hdf5-parallel-openmpi.
[arguments]: Add '--with-hdf5-include' and '--with-hdf5-lib'
flags.  Add 'set-test-environment' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-04 15:22:48 +02:00
Marius Bakke c702749dfd
gnu: arpack-ng: Update to 3.6.2.
* gnu/packages/maths.scm (arpack-ng): Update to 3.6.2.
2018-09-03 19:09:01 +02:00
Marius Bakke 91bb495b85
gnu: arpack-ng: Drop redundant phase.
* gnu/packages/maths.scm (arpack-ng)[arguments]: Remove.
2018-09-03 19:09:01 +02:00
Eric Bavier 220458b098
gnu: hypre: Update to 2.14.0.
* gnu/packages/maths.scm (hypre): Update to 2.14.0
2018-08-31 10:08:00 -05:00
Tobias Geerinckx-Rice e29bb27d88
gnu: r-pracma: Update to 2.1.5.
* gnu/packages/maths.scm (r-pracma): Update to 2.1.5.
2018-08-28 22:31:00 +02:00
Marius Bakke a7bc1588e6
Merge branch 'staging' 2018-08-19 15:24:59 +02:00
Kei Kebreau b13ba3f1ba
gnu: gnuplot: Update to 5.2.4.
* gnu/packages/maths.scm (gnuplot): Update to 5.2.4.
2018-08-18 21:21:52 -04:00
Kei Kebreau 7fe491fbc8
gnu: cddlib: Update to 0.94i.
* gnu/packages/maths.scm (cddlib): Update to 0.94i.
2018-08-18 12:04:54 -04:00
Kei Kebreau b66741edc9
gnu: octave: Update to 4.4.1.
* gnu/packages/maths.scm (octave): Update to 4.4.1.
(qtoctave)[source]: Remove obsolete patch.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-17 10:47:52 -04:00
Tobias Geerinckx-Rice f133e24481
gnu: armadillo: Update to 9.100.5.
* gnu/packages/maths.scm (armadillo): Update to 9.100.5.
2018-08-17 00:38:17 +02:00
Marius Bakke df570bf271
Merge branch 'master' into staging 2018-08-16 20:56:38 +02:00
Tobias Geerinckx-Rice e405c0bcd9
gnu: armadillo: Update to 9.100.4.
* gnu/packages/maths.scm (armadillo): Update to 9.100.4.
2018-08-16 02:40:59 +02:00
Kei Kebreau df1bc82b69
gnu: ocaml-gsl: Update to 1.22.0.
* gnu/packages/maths.scm (ocaml-gsl): Update to 1.22.0.
2018-08-15 08:11:58 -04:00
Kei Kebreau 9285f8bbae
gnu: coda: Update to 2.19.
* gnu/packages/maths.scm (coda): Update to 2.19.
2018-08-13 22:18:09 -04:00
Marius Bakke 869250809b
Merge branch 'master' into staging 2018-07-30 18:08:28 +02:00
Marius Bakke f419abea22
gnu: openblas: Update to 0.3.2.
* gnu/packages/maths.scm (openblas): Update to 0.3.2.
2018-07-30 15:32:10 +02:00
Efraim Flashner 077d66ed42
gnu: mcrl2: Build with modular qt.
* gnu/packages/maths.scm (mcrl2)[inputs]: Replace qt with qtbase.
2018-07-29 20:00:30 +03:00
Marius Bakke 1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Marius Bakke 48d7ac175f
gnu: openlibm: Update to 0.6.0.
* gnu/packages/maths.scm (openlibm): Update to 0.6.0.
2018-07-28 18:12:13 +02:00
Marius Bakke 46bda5eb7a
gnu: glm: Update home page.
* gnu/packages/maths.scm (glm)[home-page]: Use HTTPS.
2018-07-28 17:56:59 +02:00
Marius Bakke 5ea4b5943d
gnu: glm: Update to 0.9.9.0.
* gnu/packages/maths.scm (glm): Update to 0.9.9.0.
[source](uri): Change to new download location.
2018-07-28 17:55:04 +02:00
Marius Bakke 57ba8d0673
gnu: double-conversion: Update to 3.0.0.
* gnu/packages/maths.scm (double-conversion): Update to 3.0.0.
2018-07-22 18:23:43 +02:00
Marius Bakke b343850ea3
gnu: double-conversion: Update home page.
* gnu/packages/maths.scm (double-conversion)[home-page]: Update to redirected.
2018-07-22 18:23:42 +02:00
Kei Kebreau c215fa2135
gnu: octave: Add qhull support.
* gnu/packages/maths.scm (octave)[inputs]: Add qhull.
2018-07-17 15:29:05 -04:00
Kei Kebreau d65f0661f3
gnu: Add qhull.
* gnu/packages/maths.scm (qhull): New variable.
2018-07-17 12:49:20 -04:00
Marius Bakke 19bb999a50
gnu: openblas: Update to 0.3.1.
* gnu/packages/patches/openblas-fix-tests-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/maths.scm (openblas): Update to 0.3.1.
[arguments, native-inputs]: Don't apply 'openblas-fix-tests-i686.patch'.
2018-07-13 12:31:49 +02:00
Marius Bakke 873325b030
Merge branch 'master' into staging 2018-07-08 23:58:22 +02:00
Kei Kebreau 6104f922ee
gnu: units: Update to 2.17.
* gnu/packages/maths.scm (units): Update to 2.17.
2018-07-02 21:12:55 -04:00
Marius Bakke 92af3ce417
Merge branch 'master' into staging 2018-07-02 12:18:58 +02:00
Kei Kebreau 7a3772b374
gnu: qtoctave: Fix build for Qt 5.11.
* gnu/packages/maths.scm (qtoctave)[source]: Add patch.
[native-inputs]: Add texlive.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-30 20:05:58 -04:00
Tobias Geerinckx-Rice 0f6dc120ca
gnu: slepc: Return #t from all phases.
* gnu/packages/maths.scm (slepc)[arguments]: Return #t rather than
undefined from phases.
2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice b414cf523b
gnu: mumps: Use INVOKE.
* gnu/packages/maths.scm (mumps)[arguments]: Substitute INVOKE for
SYSTEM*.
2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice e02a9975b8
gnu: superlu-dist: Return #t from all phases.
* gnu/packages/maths.scm (superlu-dist)[arguments]: Return #t rather
than undefined from phases. Substitute INVOKE for SYSTEM*.
2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice d67a7e9e8d
gnu: scotch: Return #t from all phases.
* gnu/packages/maths.scm (scotch)[arguments]: Return #t rather than undefined from phases. Substitute INVOKE for SYSTEM*.
2018-06-30 03:46:19 +02:00
Tobias Geerinckx-Rice 49fdd357a2
gnu: petsc: Return #t from phases.
* gnu/packages/maths.scm (petsc)[arguments]: Substitute INVOKE for
SYSTEM*.
2018-06-30 03:46:19 +02:00
Marius Bakke b7a46ed227
gnu: openblas: Fix build on i686.
* gnu/packages/patches/openblas-fix-tests-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/maths.scm (openblas)[native-inputs]: Add it.
[arguments]: Add phase to apply it on i686 systems only.
2018-06-20 16:02:04 +02:00
Marius Bakke 6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Marius Bakke 73d18915b5
gnu: OpenBLAS: Update to 0.3.0.
* gnu/packages/maths.scm (openblas): Update to 0.3.0.
2018-06-18 15:27:08 +02:00
Ludovic Courtès f3a34b9de8
gnu: gsl: Update to 2.5.
* gnu/packages/maths.scm (gsl): Update to 2.5.
2018-06-17 01:40:14 +02:00
Ludovic Courtès b5edc47912
gnu: flann: Fix builds with CMake >= 3.11.
* gnu/packages/patches/flann-cmake-3.11.patch: New file.
* gnu/packages/maths.scm (flann)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-12 15:23:34 +02:00
Theodoros Foradis fc3c88ec9c
gnu: lapack-3.5: Delete package.
* gnu/packages/maths.scm (lapack-3.5): Delete package.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-06-07 23:23:40 +02:00
Mark H Weaver c0d7c1244a
Merge branch 'master' into core-updates 2018-05-29 21:20:47 -04:00
Kei Kebreau de658cc2f8
gnu: octave: Update to 4.4.0.
* gnu/packages/maths.scm (octave): Update to 4.4.0.
2018-05-29 18:20:37 -04:00
Mark H Weaver 1640f16e78
Merge branch 'master' into core-updates 2018-05-27 01:26:09 -04:00
Ludovic Courtès 6df2a50ac4
gnu: openmpi: Update to 3.0.1.
* gnu/packages/mpi.scm (openmpi): Update to 3.0.1.
[arguments]: In 'remove-absolute' phase, adjust romio file name.
* gnu/packages/maths.scm (scalapack)[arguments]: Add
'set-test-environment' phase.
(slepc-openmpi)[arguments]: Likewise.
(mumps-openmpi)[arguments]: Likewise.
(superlu-dist)[arguments]: In 'check' phase, set
'OMPI_MCA_plm_rsh_agent'.
(scotch)[arguments]: In 'build-esmumps', likewise.
(p4est)[arguments]: Add 'set-test-environment' phase.
(hypre-openmpi)[arguments]: Likewise.
2018-05-25 13:43:03 +02:00
Ludovic Courtès 0921eff2a8
gnu: superlu-dist: Update to 5.3.0.
* gnu/packages/maths.scm (superlu-dist): Update to 5.3.0.
[source](snippet): Adapt file name and function names to new version.
Remove 'delete-file' call.
2018-05-25 13:43:03 +02:00