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8217 Commits

Author SHA1 Message Date
Hartmut Goebel 1ad15c1669 gnu: Rename Java packages to match new naming specification. 
* gnu/packages/bioinformatics.scm (htsjdk): Rename to...
(java-htsjdk): ...this.
(ngs-java): Rename to...
(java-ngs): ...this.
(ncbi-vdb)[arguments,inputs]: Use new name.
* gnu/packages/java.scm (swt): Rename to...
(java-swt): ...this.
* gnu/packages/music.scm (tuxguitar)[make-flags,inputs,arguments]: Use
new name of package "swt".
 2016-04-19 16:55:03 +02:00
Ricardo Wurmus 4d16cc5133 gnu: python2-plastid: Propagate setuptools. 
* gnu/packages/bioinformatics.scm (python2-plastid)[native-inputs]: Move
python2-setuptools from here...
[propagated-inputs]: ...to here.
 2016-04-19 16:12:51 +02:00
Ricardo Wurmus 8694dca8f3 gnu: r: Update to 3.2.5. 
* gnu/packages/statistics.scm (r): Update to 3.2.5.
 2016-04-19 14:44:29 +02:00
Ricardo Wurmus 349a314765 gnu: Add icedtea-8. 
* gnu/packages/java.scm (icedtea-8): New variable.
 2016-04-19 14:44:29 +02:00
Ricardo Wurmus f94bf1983b gnu: Add python-plastid. 
* gnu/packages/bioinformatics.scm (python-plastid, python2-plastid): New
  variables.
 2016-04-19 12:16:01 +02:00
Ricardo Wurmus 4db9433aa0 gnu: Add python-twobitreader. 
* gnu/packages/bioinformatics.scm (python-twobitreader,
  python2-twobitreader): New variables.
 2016-04-19 12:16:01 +02:00
Danny Milosavljevic 3fd4b90d1d gnu: Add cabextract. 
* gnu/packages/compression.scm (cabextract): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-04-18 16:02:53 -04:00
Kei Yamashita c21a256272 gnu: Add dillo. 
* gnu/packages/dillo.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-04-18 15:45:41 -04:00
Kei Yamashita cf1b55bd32 gnu: fltk: Add Xft support. 
* gnu/packages/fltk.scm (fltk)[inputs]: Add libxft.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-04-18 15:39:34 -04:00
Ludovic Courtès cd76fbde6f gnu: vlc: Make 'plugins.dat' generation reproducible. 
Fixes <http://bugs.gnu.org/23307>.

* gnu/packages/video.scm (vlc)[arguments]: Add #:phases.
 2016-04-18 15:39:43 +02:00
Ludovic Courtès 4ef2721b52 gnu: vlc: Do not capture the build time. 
* gnu/packages/video.scm (vlc)[source]: Add 'snippet'.
 2016-04-18 12:08:31 +02:00
Ludovic Courtès b4dff93550 gnu: vlc: Build against ffmpeg 2.8. 
Fixes <http://bugs.gnu.org/23256>.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/packages/video.scm (vlc): Use FFMPEG-2.8 instead of FFMPEG.
 2016-04-18 11:58:15 +02:00
Ludovic Courtès 940778c71c gnu: ffmpeg: Re-add 2.8.6. 
* gnu/packages/video.scm (ffmpeg-2.8): New variable.
 2016-04-18 11:26:30 +02:00
Ben Woodcroft 9bb46c155b gnu: ruby-bio-commandeer: Update to 0.1.3. 
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.1.3.
 2016-04-18 14:58:43 +10:00
Ludovic Courtès ffba7d498d mapped-devices: LUKS partitions can be designated by their UUID. 
* gnu/system/mapped-devices.scm (device-mapping-service-type): Add
'modules' and 'imported-modules' fields to 'shepherd-service'.
(open-luks-device): Use 'find-partition-by-luks-uuid' to lookup the
partition when SOURCE is a bytevector.
* gnu/system/linux-initrd.scm (base-initrd): Augment 'use-modules'
form.
* doc/guix.texi (Mapped Devices): Give example with a UUID.
 2016-04-18 01:24:06 +02:00
Ludovic Courtès 4da8c19e83 mapped-devices: 'mapped-device-service' takes a <mapped-device>. 
* gnu/system/mapped-devices.scm (device-mapping-service): Take a
<mapped-device> instead of 3 parameters.
(device-mapping-service-type): Adjust accordingly.
* gnu/system.scm (device-mapping-services): Adjust accordingly.
 2016-04-18 01:24:06 +02:00
Ludovic Courtès 1ea507bce2 services: Move 'device-mapping-service' to (gnu system mapped-devices). 
* gnu/services/base.scm (device-mapping-service-type)
(device-mapping-service): Move to...
* gnu/system/mapped-devices.scm (device-mapping-service-type):
(device-mapping-service): ... here.  New variables.
 2016-04-18 01:24:06 +02:00
Ludovic Courtès 374f14c265 system: Move 'luks-device-mapping' to (gnu system mapped-devices). 
* gnu/system.scm (open-luks-device, close-luks-device)
(luks-device-mapping): Move to...
* gnu/system/mapped-devices.scm: ... here.  New file.
 2016-04-18 01:24:06 +02:00
Ludovic Courtès 060d62a740 system: Add (gnu system mapped-devices). 
* gnu/system/file-systems.scm (<mapped-device>, <mapped-device-type>):
Move to...
* gnu/system/mapped-devices.scm: ... here.  New file.
* gnu/system.scm, gnu/services/base.scm,
gnu/system/linux-initrd.scm: Use it.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu.scm (%public-modules): Add it.
 2016-04-18 01:24:06 +02:00
Ricardo Wurmus fac34dfe2a gnu: Add python-pyusb. 
* gnu/packages/libusb.scm (python-pyusb, python2-pyusb): New variables.
 2016-04-17 21:48:51 +02:00
Leo Famulari d99f6ffb4c gnu: khard: Update to 0.9.0. 
* gnu/packages/mail.scm (khard): Update to 0.9.0.
 2016-04-17 14:35:11 -04:00
Leo Famulari 9bed9b150d gnu: python-vobject: Update to 0.9.2. 
* gnu/packages/python.scm (python-vobject, python2-vobject): Update to 0.9.2.
 2016-04-17 14:35:11 -04:00
Leo Famulari 67157996e2 gnu: openssh: Fix CVE-2015-8325. 
* gnu/packages/patches/openssh-CVE-2015-8325.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh): Use it.
 2016-04-17 13:48:31 -04:00
Ludovic Courtès a7d94b54c7 gnu: Add recordmydesktop. 
* gnu/packages/video.scm (recordmydesktop): New variable.
 2016-04-17 17:37:20 +02:00
Ludovic Courtès c82c060d91 install: Use 'beta' instead of 'alpha'. 
Suggested by Jelle Licht <jlicht@fsfe.org>.

* gnu/system/install.scm (installation-services): Say 'beta' instead of
'alpha' and make the warning less scary.
 2016-04-17 17:37:20 +02:00
Ricardo Wurmus 534db46306 gnu: python-pandas: Fix test failures. 
* gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch: New
  file.
* gnu-system.am (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-pandas)[source]: Add patch.
 2016-04-17 11:36:25 +02:00
Ricardo Wurmus b711df02fd gnu: icedtea-7: Update to 2.6.5. 
* gnu/packages/java.scm (icedtea-7): Update to 2.6.5.
[inputs]: Add libxcomposite.
 2016-04-17 11:15:53 +02:00
Alex Kost b3d05f4870 services: 'console-keymap-service' takes multiple files. 
* gnu/services/base.scm (console-keymap-service-type): Type procedure
takes a list of files instead of a single file.
(console-keymap-service): Take 'files' as rest arguments.
* doc/guix.texi (Base Services): Improve documentation of
'console-keymap-service'.
 2016-04-17 10:33:08 +03:00
Alex Kost a78daf5e2b gnu: kbd: Update to 2.0.3. 
* gnu/packages/linux.scm (kbd): Update to 2.0.3.
 2016-04-17 10:33:08 +03:00
Alex Kost 5953d2b7c0 gnu: kbd: Use 'modify-phases'. 
* gnu/packages/linux.scm (kbd)[arguments]: Use 'modify-phases'.
 2016-04-17 10:33:08 +03:00
Ludovic Courtès a1ccefaa12 file-systems: Add 'find-partition-by-luks-uuid'. 
* gnu/build/file-systems.scm (%luks-endianness, %luks-header-size): New
macros.
(%luks-magic): New variable.
(sub-bytevector, read-luks-header, luks-header-uuid): New procedures.
(partition-predicate): Add 'read' parameter; wrap it with 'ENOENT-safe'.
Use it instead of 'read-ext2-superblock*'.
(read-ext2-superblock*): Remove.
(partition-label-predicate, partition-uuid-predicate): Pass
'read-ext2-superblock' as the first argument.
(partition-luks-uuid-predicate): New variable.
(find-partition-by-luks-uuid): New procedure.
 2016-04-17 01:23:52 +02:00
Ludovic Courtès 2447335625 file-systems: Separate ENOENT catching from ext2 superblock reads. 
* gnu/build/file-systems.scm (ENOENT-safe): New procedure.
(read-ext2-superblock*): Rewrite in terms of it.
 2016-04-17 01:23:52 +02:00
John Darrington f6c8cb996b gnu: Add marst. 
* gnu/packages/marst.scm: New file.
* gnu-system.am: Add it.
 2016-04-16 18:46:17 +02:00
Manolis Ragkousis 503275e94a gnu: linux: Add case for arm64. 
* gnu/packages/linux.scm (system->linux-architecture): Add
  "aarch64".
 2016-04-16 18:10:36 +03:00
Manolis Ragkousis 19c444f403 gnu: bootstrap: Add the location of ld.so on arm64. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add the dynamic
  linker for aarch64-linux.
 2016-04-16 18:10:31 +03:00
Ludovic Courtès 9f088725c0 gnu: Add tcc-wrapper. 
* gnu/packages/c.scm (tcc-wrapper): New variable.
 2016-04-16 00:52:19 +02:00
Ludovic Courtès a5e2c9a9c5 gnu: Add tcc. 
* gnu/packages/c.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2016-04-16 00:52:19 +02:00
Ricardo Wurmus 770305f4ab gnu: Add Beast. 
* gnu/packages/music.scm (beast): New variable.
 2016-04-15 22:11:17 +02:00
Ricardo Wurmus 96d15e4841 gnu: Add rapicorn. 
* gnu/packages/graphics.scm (rapicorn): New variable.
 2016-04-15 22:10:08 +02:00
Ricardo Wurmus 2df831a78a gnu: Add libpng-1.2. 
* gnu/packages/image.scm (libpng-1.2): New variable.
 2016-04-15 22:10:02 +02:00
Chris Marusich 9e9c71eb60 gnu: Add emacs-ffap-rfc-space. 
* gnu/packages/emacs.scm (emacs-ffap-rfc-space): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-04-15 11:32:37 +03:00
Chris Marusich 4670f70a7f gnu: Add emacs-rfcview. 
* gnu/packages/emacs.scm (emacs-rfcview): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-04-15 11:32:37 +03:00
Albin Söderqvist e9687748e1 gnu: Add openttd. 
* gnu/packages/games.scm (openttd-engine): New variable (private).
(openttd): Inherit it.  New variable (public).

Signed-off-by: Alex Kost <alezost@gmail.com>
 2016-04-15 11:32:37 +03:00
Eric Bavier de946028be gnu: fontforge: Swap giflib input for libungif. 
* gnu/packages/fontutils.scm (fontforge)[inputs]: Remove giflib, add
libungif.
[arguments]: Adjust 'set-library-path' phase accordingly.
 2016-04-15 00:39:31 -05:00
Eric Bavier 17b974f71c gnu: fontforge: Remove 'patch-configure' phase. 
* gnu/packages/fontutils.scm (fontforge)[arguments]: Remove
'patch-configure' phase, which became unnecessary in the latest
versions.
 2016-04-15 00:39:21 -05:00
Eric Bavier 5f031ed242 gnu: fontforge: Install 'showttf' tool. 
* gnu/packages/fontutils.scm (fontforge)[arguments]: Add 'build-contrib'
phase.
 2016-04-15 00:39:08 -05:00
Eric Bavier 5ab869f962 gnu: fontforge: Use modify-phases. 
* gnu/packages/fontutils.scm (fontforge)[arguments]: Use modify-phases.
 2016-04-15 00:35:36 -05:00
Eric Bavier f85cafde81 gnu: Add font-fantasque-sans. 
* gnu/packages/fonts.scm (font-fantasque-sans): New variable.
 2016-04-15 00:35:36 -05:00
Eric Bavier 5391be116e gnu: fontforge: Make SVG builds reproducible. 
* gnu/packages/patches/fontforge-svg-modtime.patch: New file.
* gnu/packages/fontutils.scm (fontforge)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-04-15 00:23:29 -05:00
Eric Bavier 579760d06e gnu: Add woff2. 
* gnu/packages/fontutils.scm (woff2): New variable.
* gnu/packages/patches/woff2-libbrotli.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-04-15 00:23:29 -05:00