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3420 Commits

Author SHA1 Message Date
Eric Bavier 0d3ec4951e gnu: Add Algorithm-Diff. 
* gnu/packages/perl.scm (perl-algorithm-diff): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier e8bba431a8 gnu: Add inc-latest. 
* gnu/packages/perl.scm (perl-inc-latest): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier ce60f167ea gnu: Add Config-AutoConf. 
* gnu/packages/perl.scm (perl-config-autoconf): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 8bc9515d9b gnu: Add Eval-Closure. 
* gnu/packages/perl.scm (perl-eval-closure): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 4400eb95e4 gnu: Add Devel-LexAlias. 
* gnu/packages/perl.scm (perl-devel-lexalias): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 0b15ffbc31 gnu: Add Devel-Caller. 
* gnu/packages/perl.scm (perl-devel-caller): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 54af5f5518 gnu: Add PadWalker. 
* gnu/packages/perl.scm (perl-padwalker): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 42350bbe77 gnu: Add Devel-StackTrace. 
* gnu/packages/perl.scm (perl-devel-stacktrace): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 81da66e239 gnu: Add Devel-PartialDump. 
* gnu/packages/perl.scm (perl-devel-partialdump): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier d85de704a4 gnu: Add Class-Tiny. 
* gnu/packages/perl.scm (perl-class-tiny): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier bf1975c774 gnu: Add Test-Warn. 
* gnu/packages/perl.scm (perl-test-warn): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 5d2935e3fc gnu: Add Sub-Uplevel. 
* gnu/packages/perl.scm (perl-sub-uplevel): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier e2e3d62a65 gnu: Add Devel-OverloadInfo. 
* gnu/packages/perl.scm (perl-devel-overloadinfo): New variable.
 2015-03-06 08:13:28 -06:00
Eric Bavier 2aa51030e9 gnu: Add MRO-Compat. 
* gnu/packages/perl.scm (perl-mro-compat): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 70a9a4911a gnu: Add Devel-GlobalDestruction. 
* gnu/packages/perl.scm (perl-devel-globaldestruction): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 81bffd455b gnu: Add Class-Load-XS. 
* gnu/packages/perl.scm (perl-class-load-xs): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier d439d53741 gnu: Add Class-Load. 
* gnu/packages/perl.scm (perl-class-load): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 6c319d12bd gnu: Add Module-Build-Tiny. 
* gnu/packages/perl.scm (perl-module-build-tiny): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 9c7d97c47d gnu: Add Test-Harness. 
* gnu/packages/perl.scm (perl-test-harness): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 0bcb85be50 gnu: Add ExtUtils-Helpers. 
* gnu/packages/perl.scm (perl-extutils-helpers): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 9c8f076567 gnu: Add ExtUtils-InstallPaths. 
* gnu/packages/perl.scm (perl-extutils-installpaths): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 6eb28ece00 gnu: Add ExtUtils-Config. 
* gnu/packages/perl.scm (perl-extutils-config): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 269ef08622 gnu: Add Test-CleanNamespaces. 
* gnu/packages/perl.scm (perl-test-cleannamespaces): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier b0c2ae5022 gnu: Add File-Find-Rule-Perl. 
* gnu/packages/perl.scm (perl-file-find-rule-perl): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier e91d4accd1 gnu: Add File-Find-Rule. 
* gnu/packages/perl.scm (perl-file-find-rule): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier f57c768639 gnu: Add Number-Compare. 
* gnu/packages/perl.scm (perl-number-compare): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier cab88488e9 gnu: Add Text-Glob. 
* gnu/packages/perl.scm (perl-text-glob): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier a7a75c87b0 gnu: Add Sub-Identify. 
* gnu/packages/perl.scm (perl-sub-identify): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 9727c33f3b gnu: Add namespace-clean. 
* gnu/packages/perl.scm (perl-namespace-clean): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 0e2f7cfcc7 gnu: Add B-Hooks-EndOfScope. 
* gnu/packages/perl.scm (perl-b-hooks-endofscope): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 5f60001133 gnu: Add Variable-Magic. 
* gnu/packages/perl.scm (perl-variable-magic): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 85e92c32c6 gnu: Add Sub-Exporter-Progressive. 
* gnu/packages/perl.scm (perl-sub-exporter-progressive): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier d9e6af9090 gnu: Add Package-Stash. 
* gnu/packages/perl.scm (perl-package-stash): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier f9f64440f7 gnu: Add Package-Stash-XS. 
* gnu/packages/perl.scm (perl-package-stash-xs): New variable.
 2015-03-06 08:13:27 -06:00
Eric Bavier 3fa4c22abe gnu: Add Module-Implementation. 
* gnu/packages/perl.scm (perl-module-implementation): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 76a6f27952 gnu: Add Package-Anon. 
* gnu/packages/perl.scm (perl-package-anon): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier f59d9fc282 gnu: Add Test-Warnings. 
* gnu/packages/perl.scm (perl-test-warnings): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier cb6d9b1b04 gnu: Add Test-Requires. 
* gnu/packages/perl.scm (perl-test-requires): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier b7d9aa5945 gnu: Add Dist-CheckConflicts. 
* gnu/packages/perl.scm (perl-dist-checkconflicts): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 185082c864 gnu; Add Module-Runtime. 
* gnu/packages/perl.scm (perl-module-runtime): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 07b2c25486 gnu: Add Test-Fatal. 
* gnu/packages/perl.scm (perl-test-fatal): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 90ae6151cf gnu: Add Try-Tiny. 
* gnu/packages/perl.scm (perl-try-tiny): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier a77ed67def gnu: Add CPAN-Meta-Check. 
* gnu/packages/perl.scm (perl-cpan-meta-check): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier e0b8689c15 gnu: Add CPAN-Meta. 
* gnu/packages/perl.scm (perl-cpan-meta): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 70e834625f gnu: Add Parse-CPAN-Meta. 
* gnu/packages/perl.scm (perl-parse-cpan-meta): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 6f2768c3f0 gnu: Add CPAN-Meta-YAML. 
* gnu/packages/perl.scm (perl-cpan-meta-yaml): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 90fb2e2467 gnu: Add CPAN-Meta-Requirements. 
* gnu/packages/perl.scm (perl-cpan-meta-requirements): New variable.
 2015-03-06 08:13:26 -06:00
Eric Bavier 884529b780 gnu: perl-test-simple: Update to 1.001014. 
* gnu/packages/perl.scm (perl-test-simple): Update to 1.001014.
 2015-03-06 08:13:26 -06:00
Eric Bavier fc8c2f7b82 gnu: perl-data-optlist: Move input to propagated-inputs. 
* gnu/packages/perl.scm (perl-data-optlist): Move perl-params-util
  from inputs to propagated-inputs.
 2015-03-06 08:13:26 -06:00
Eric Bavier 73fc71ba3d perl: Alphabetize module packages. 
* gnu/packages/perl.scm: Alphabetize package definitions.
 2015-03-06 08:13:26 -06:00
Tomáš Čech f195b36602 gnu: grub: Add patch to fix new version of freetype 
* gnu/packages/patches/grub-freetype.patch: New file.
* gnu-system.am (dist_patch_DATA): Add the patch.
* gnu/packages/grub.scm (grub): Apply new patch.
 2015-03-06 09:38:41 +01:00
Mark H Weaver 81f36365f1 gnu: nss-certs: Include 'install-locale' phase. 
* gnu/packages/certs.scm (nss-certs)[arguments]: Include 'install-locale'
  phase.  Remove outdated comment.
  (certdata2pem)[source]: Add 'file-name' to origin.
 2015-03-06 00:38:09 -05:00
Ludovic Courtès af0927ac68 gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix-devel): Update snapshot.
 2015-03-06 00:44:01 +01:00
Ludovic Courtès 211db2f645 gnu: glibc: Comment on the parallel build race. 
* gnu/packages/base.scm (glibc): Augment comment regarding sequential
  builds.
 2015-03-06 00:44:01 +01:00
Alex Sassmannshausen 15926aec0d gnu: Add tree. 
* gnu/packages/admin.scm (tree): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-03-06 00:44:01 +01:00
Andreas Enge 43640a33f4 gnu: valgrind: Update to 3.10.1. 
* gnu/packages/valgrind.scm (valgrind): Update to 3.10.1.
 2015-03-05 23:46:07 +01:00
Ludovic Courtès 07157e8ab4 gnu: gnupg: Remove #:prefix for (gnu packages compression). 
* gnu/packages/gnupg.scm: Remove #:prefix for (gnu packages
  compression).  Add #:prefix for (gnu packages license).
 2015-03-05 22:20:52 +01:00
Mark H Weaver 87d7928294 gnu: lftp: Don't save unknown SSH host fingerprints to known_hosts by default. 
* gnu/packages/patches/lftp-dont-save-unknown-host-fingerprint.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ftp.scm (lftp): Add patch.
 2015-03-05 12:16:44 -05:00
Paul van der Walt b3886e0c53 gnu: Add zathura comicbook plugin. 
* gnu/packages/pdf.scm (zathura-cb): New variable.
 2015-03-05 10:23:07 +01:00
Paul van der Walt 721a4f7d57 gnu: Add zathura postscript plugin. 
* gnu/packages/pdf.scm (zathura-ps): New variable.
 2015-03-05 10:23:07 +01:00
Paul van der Walt bac31d1f2d gnu: Add zathura DjVu plugin. 
* gnu/packages/pdf.scm (zathura-djvu): New variable.
 2015-03-05 10:23:07 +01:00
Paul van der Walt 7708557fd9 gnu: Add zathura PDF plugin. 
* gnu/packages/pdf.scm (zathura-pdf-poppler): New variable.
 2015-03-05 10:23:07 +01:00
Paul van der Walt 3e40bb8298 gnu: Add zathura. 
* gnu/packages/pdf.scm (zathura): New variable.
* gnu/packages/patches/zathura-plugindir-environment-variable.patch: New file.
* gnu-system.am: Add it.
 2015-03-05 10:23:07 +01:00
Paul van der Walt 1a8bf1dc41 gnu: Add djvulibre. 
* gnu/packages/djvu.scm (djvulibre): New variable.
* gnu-system.am: Add the file.
 2015-03-05 10:23:07 +01:00
Ricardo Wurmus 279663efa5 gnu: Add muparser. 
* gnu/packages/maths.scm (muparser): New variable.
 2015-03-05 08:01:15 +01:00
David Thompson d9d9d4861c gnu: ruby: Update to 2.2.1. 
* gnu/packages/ruby.scm (ruby): Update to 2.2.1.
 2015-03-04 20:20:47 -05:00
Alex Kost 5d9ecd157e gnu: Add Russian Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-ru): New variable.
 2015-03-04 22:03:30 +03:00
Ludovic Courtès ce0614ddb0 gnu: Move 'which' to (gnu packages base). 
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
  gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
  gnu/packages/compression.scm, gnu/packages/datamash.scm,
  gnu/packages/games.scm, gnu/packages/glib.scm,
  gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
  gnu/packages/gps.scm, gnu/packages/guile.scm,
  gnu/packages/java.scm, gnu/packages/libevent.scm,
  gnu/packages/linux.scm, gnu/packages/lisp.scm,
  gnu/packages/node.scm, gnu/packages/ntp.scm,
  gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
  gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
  gnu/packages/scheme.scm, gnu/packages/ssh.scm,
  gnu/packages/statistics.scm, gnu/packages/texlive.scm,
  gnu/packages/wdiff.scm: Adjust accordingly.
 2015-03-04 17:23:27 +01:00
Ludovic Courtès f61e0e7900 gnu: Avoid #:prefix when importing a (gnu packages …) module. 
* gnu/packages/admin.scm, gnu/packages/emacs.scm,
  gnu/packages/gnutls.scm, gnu/packages/gsasl.scm,
  gnu/packages/linux.scm: Remove uses of #:prefix for package modules.
 2015-03-04 17:23:27 +01:00
Ricardo Wurmus 0e309f1e5b gnu: icedtea6: split outputs. 
* gnu/packages/java.scm (icedtea6)[outputs]: Use separate outputs for
  documentation ("doc"), JDK ("jdk"), and JRE ("out").
* gnu/packages/java.scm (ant)[native-inputs]: Reference "jdk" output of
  icedtea6 package.
* gnu/packages/statistics.scm (r)[inputs]: Reference "jdk" output of icedtea6
  package.
 2015-03-04 15:59:41 +01:00
Ludovic Courtès 1289062522 Merge branch 'core-updates'. 2015-03-04 14:07:23 +01:00
Ricardo Wurmus cb4d3d863b gnu: python2-pygtk: fix path to pygobject-codegen-2.0 
* gnu/packages/gtk.scm (python2-pygtk)[arguments]: Add phase to patch the path
  to the pygobject-codegen-2.0 executable.
 2015-03-04 13:30:39 +01:00
宋文武 32158110b0 gnu: octave: Update to 3.8.2. 
* gnu/packages/maths.scm (octave): Update to 3.8.2.
 2015-03-04 16:45:23 +08:00
Tomáš Čech 27ce97c64e gnu: enlightenment: Add missing, but used module. 
* gnu/packages/enlightenment.scm: Add missing, but used module.
 2015-03-04 09:36:49 +01:00
Tomáš Čech ea28d935f3 gnu: rename module and add missing dependency 
* gnu/packages/enlightenment.scm: Change module name to be consistent.
* gnu/packages/enlightenment.scm: Add missing, but used module.
 2015-03-04 08:50:39 +01:00
宋文武 5713809335 gnu: xterm: Update to 315. 
* gnu/packages/xorg.scm (xterm): Update to 315.
 2015-03-04 13:30:51 +08:00
宋文武 081cbed90e gnu: flac: Update to 1.3.1. 
* gnu/packages/xiph.scm (flac): Update to 1.3.1.
 2015-03-04 13:19:24 +08:00
宋文武 d529b91b4e gnu: flac: Propagate libogg. 
* gnu/packages/xiph.scm (flac): Move libogg to 'propagated-inputs'.
 2015-03-04 13:06:32 +08:00
宋文武 221d45726c gnu: gtk-xfce-engine: Update to 2.10.1. 
* gnu/packages/xfce.scm (gtk-xfce-engine): Update to 2.10.1.
 2015-03-04 10:16:43 +08:00
Ludovic Courtès 928d62f225 gnu: Add bash-completion. 
* gnu/packages/bash.scm (bash-completion): New variable.
 2015-03-03 22:58:46 +01:00
Ludovic Courtès 23c0e74375 gnu: git: Install the Bash completion script. 
* gnu/packages/version-control.scm (git)[arguments]: Add
  'install-shell-completion' phase.
 2015-03-03 22:58:45 +01:00
Ludovic Courtès da699774d4 gnu: Add search path specifications for 'SSL_CERT_FILE' and 'GIT_SSL_CAINFO'. 
* gnu/packages/openssl.scm (openssl)[native-search-paths]: Add
  specification for 'SSL_CERT_FILE'.
* gnu/packages/version-control.scm (git)[native-search-paths]: Add
  specification for 'GIT_SSL_CAINFO'.
 2015-03-03 21:25:39 +01:00
Mark H Weaver 41ce460133 gnu: nss-certs: Install only trusted CA certificates. 
* gnu/packages/certs.scm (nss-certs): Only install certificates that include a
  non-empty "openssl-trust=" annotation.
 2015-03-03 13:49:12 -05:00
Mark H Weaver 78ab0746a5 system: Add /etc/ssl symlink; set needed variables in /etc/profile. 
* gnu/build/activation.scm (activate-etc): Create /etc/ssl symlink.
* gnu/system.scm (etc-directory): Set SSL_CERT_DIR, SSL_CERT_FILE,
  and GIT_SSL_CAINFO in /etc/profile.

Co-Authored-By: Ludovic Courtès <ludo@gnu.org>
 2015-03-03 13:49:12 -05:00
Mark H Weaver e33eea8ffd Revert "system: Add 'x509-certificates' field, and populate /etc/ssl/certs." 
This reverts commit e979e6dd52.
 2015-03-03 13:49:12 -05:00
Mark H Weaver bd4c47a47e Revert "system: Create a single-file certificate bundle in /etc/ssl/certs." 
This reverts commit 993300f6cc.
 2015-03-03 13:49:12 -05:00
Ludovic Courtès 00e650981c gnu: Add rdesktop. 
* gnu/packages/rdesktop.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-03-03 18:45:10 +01:00
Jason Self ad036bda89 gnu: vlc: Update to 2.2.0 
* gnu/packages/video.scm (vlc): Update to version 2.2.0.
 2015-03-03 05:31:59 -08:00
Jason Self 32d9109f24 gnu: libvorbis: Update to 1.3.5 
* gnu/packages/xiph.scm (libvorbis): Update to version 1.3.5.
 2015-03-03 05:15:54 -08:00
Tomáš Čech df2b053af8 gnu: Add terminology. 
* gnu/packages/enlightenment.scm (terminology): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech cfa0468317 gnu: Add emotion-generic-players 
* gnu/packages/enlightenment.scm (emotion-generic-players): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech 87a37fdf72 gnu: Add evas-generic-loaders 
* gnu/packages/enlightenment.scm (evas-generic-loaders): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech 146ee5cd28 gnu: Add elementary. 
* gnu/packages/enlightenment.scm (elementary): New variable.
 2015-03-03 13:04:37 +01:00
Tomáš Čech 538fb23ea0 gnu: Add efl. 
* gnu/packages/enlightenment.scm: New file
* gnu/packages/enlightenment.scm (efl): New variable.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2015-03-03 13:04:37 +01:00
Ricardo Wurmus 92cb152b37 gnu: Add snakemake. 
* gnu/packages/python.scm (snakemake): New variable.
 2015-03-03 10:22:23 +01:00
Mark H Weaver bbd0ea77ef gnu: libuv: Update to 1.4.2. 
* gnu/packages/libevent.scm (libuv): Update to 1.4.2.  Update source URI.
  Add 'file-name' field to origin.  Move 'autogen' phase after 'unpack'.
  Run "sh autogen.sh" instead of "./autogen.sh".
 2015-03-02 20:35:32 -05:00
Mark H Weaver 2ecebec142 gnu: skribilo: Adapt to recently renamed 'guile-reader' variable. 
This is a followup to commit d6d9f1f715.

* gnu/packages/skribilo.scm (skribilo)[propagated-inputs]: Change
  'guile-reader/guile-2.0' --> 'guile-reader'.
 2015-03-02 19:53:42 -05:00
Paul van der Walt 136770c9c7 gnu: Add girara. 
* gnu/packages/gtk.scm (girara): Add variable.
 2015-03-02 23:37:36 +01:00
Paul van der Walt 4ac696c68b gnu: check: Update version to 0.9.14 
* gnu/packages/check.scm (check): Update to version 0.9.14.
 2015-03-02 23:37:35 +01:00
Paul van der Walt 58acabc368 gnu: mpd: Update to 0.19.9. 
* gnu/packages/mpd.scm (mpd): Update version to 0.19.9. Add boost and
  icu4c.
 2015-03-02 23:37:35 +01:00
David Thompson bda0c1392a gnu: Add ruby-hoe. 
* gnu/packages/ruby.scm (ruby-hoe): New variable.
 2015-03-02 17:33:53 -05:00
David Thompson 927ff2c379 gnu: Add mpdscribble. 
* gnu/packages/mpd.scm (mpdscribble): New variable.
 2015-03-02 17:31:40 -05:00
Ludovic Courtès e343024dc4 gnu: tcsh: Use ISO-8859-1 when patching "tests/testsuite". 
* gnu/packages/tcsh.scm (tcsh)[arguments]: Set %DEFAULT-PORT-ENCODING
  before substituting "tests/testsuite".  Fixes build failure at
  <http://hydra.gnu.org/build/266962/nixlog/1/raw>.
 2015-03-02 23:18:27 +01:00
Ludovic Courtès 993300f6cc system: Create a single-file certificate bundle in /etc/ssl/certs. 
Suggested by Mark H Weaver <mhw@netris.org>.

* gnu/system.scm (certificate-bundle): New procedure.
  (etc-directory): Use it.
  [profile]: Set 'SSL_CERT_DIR', 'SSL_CERT_FILE', and 'GIT_SSL_CAINFO'.
 2015-03-02 23:05:13 +01:00
Ludovic Courtès e979e6dd52 system: Add 'x509-certificates' field, and populate /etc/ssl/certs. 
* gnu/system.scm (<operating-system>)[x509-certificates]: New field.
  (etc-directory): Add #:x509-certificates parameter and honor it.
  (operating-system-etc-directory): Pass #:x509-certificates in
  'etc-directory' call.
* doc/guix.texi (operating-system Reference): Document
  'x509-certificates'.
 2015-03-02 22:32:54 +01:00
Ludovic Courtès d6d9f1f715 gnu: Remove 'guile-reader-for-guile_1.8'. 
This was a useful example back in July 2012, but not very useful
beyond that.

* gnu/packages/guile.scm (guile-reader): Turn into a plain package.
  [source]: Use mirror:// URI.
  [inputs]: Use GUILE-2.0.
  [arguments]: Use the site/2.0 directory for --with-moduledir.
  (guile-reader/guile-1.8, guile-reader/guile-2.0): Remove.
 2015-03-02 21:40:53 +01:00
Ludovic Courtès 16c33bfb07 services: xorg: Fix file descriptor leak from SLiM/xinitrc. 
This reverts commit 9515b74554.

* gnu/services/xorg.scm (xinitrc)[builder](close-all-fdes): Start from
  file descriptor 3.
 2015-03-02 20:34:37 +01:00
Mark H Weaver 1204c5100e gnu: Add llvm-3.6.0 and clang-3.6.0. 
* gnu/packages/llvm.scm (llvm): Update to 3.6.0.
  (clang-from-llvm): New procedure.
  (clang): Update to 3.6.0.  Reimplement using 'clang-from-llvm'.
  (llvm-3.5, clang-3.5): New variables.
 2015-03-02 12:08:56 -05:00
Ricardo Wurmus 191c710139 gnu: Add crossmap. 
* gnu/packages/bioinformatics.scm (crossmap): New variable.
* gnu/packages/patches/crossmap-allow-system-pysam.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-03-02 17:23:56 +01:00
宋文武 1385d37a6e gnu: gtk-xfce-engine: Update to 2.10.0. 
* gnu/packages/xfce.scm (gtk-xfce-engine): Update to 2.10.0.
 2015-03-02 21:27:42 +08:00
Ricardo Wurmus 810cff8557 gnu: Add CLIPper. 
* gnu/packages/bioinformatics.scm (clipper): New variable.
 2015-03-02 14:11:54 +01:00
Ricardo Wurmus 240ca4aae7 gnu: Add Scikit-learn. 
* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): New
  variables.
 2015-03-02 14:09:10 +01:00
宋文武 b283679951 gnu: xfconf: Re-enable tests. 
* gnu/packages/xfce.scm (xfconf)[arguments]: Add #:phases.
 2015-03-02 20:37:21 +08:00
Ricardo Wurmus d57e6d0f8e gnu: Add MACS. 
* gnu/packages/bioinformatics.scm (macs): New variable.
 2015-03-02 11:33:13 +01:00
Ricardo Wurmus a2fb1492af gnu: Add pybedtools. 
* gnu/packages/bioinformatics.scm (python2-pybedtools): New variable.
 2015-03-02 11:32:10 +01:00
Ricardo Wurmus 8d12be1eb1 gnu: Add pyyaml. 
* gnu/packages/python.scm (python-pyyaml, python2-pyyaml): New variables.
 2015-03-02 11:31:14 +01:00
Mark H Weaver 649b5e1bd4 gnu: libotr: Update to 4.1.0. 
* gnu/packages/messaging.scm (libotr): Update to 4.1.0.
 2015-03-02 00:09:09 -05:00
Mark H Weaver 9515b74554 Revert "services: xorg: Fix file descriptor leak from SLiM/xinitrc." 
This reverts commit ec4a4c46ef,
because it broke XFCE.
 2015-03-01 23:57:23 -05:00
Mark H Weaver e013220eb6 gnu: xfconf: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfconf): Update to 4.12.0.  Disable tests.
 2015-03-01 20:16:45 -05:00
Mark H Weaver f6176e7870 gnu: gnu-pw-mgr: Update to 1.3. 
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.3.
 2015-03-01 19:44:13 -05:00
Mark H Weaver 0a5c308782 gnu: sharutils: Update to 4.15. 
* gnu/packages/compression.scm (sharutils): Update to 4.15.
 2015-03-01 19:42:57 -05:00
Mark H Weaver 5245251eaa gnu: gdb: Update to 7.9. 
* gnu/packages/gdb.scm (gdb): Update to 7.9.
 2015-03-01 19:35:46 -05:00
Mark H Weaver 3820d39739 Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/gnupg.scm
 2015-03-01 19:05:29 -05:00
Mark H Weaver afff9058a0 gnu: gnupg: Update to 2.0.27. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.0.27.
 2015-03-01 19:02:49 -05:00
Mark H Weaver 751be9a056 gnu: libgcrypt: Update to 1.6.3. 
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.3.
 2015-03-01 18:52:02 -05:00
Ludovic Courtès 6b9540bcff gnu: wget: Update to 1.16.2. 
* gnu/packages/wget.scm (wget): Update to 1.16.2.
  [inputs]: Add PKG-CONFIG.
 2015-03-01 22:22:43 +01:00
Ludovic Courtès ec35d36495 gnu: libpsl: Fix link flag in 'libpsl.pc'. 
* gnu/packages/web.scm (libpsl)[source]: Add 'snippet' and 'modules'
  fields.
 2015-03-01 22:22:43 +01:00
Ludovic Courtès 9041d935c4 gnu: gnupg-1: Update to 1.4.19. 
* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.19.
 2015-03-01 22:22:43 +01:00
Taylan Ulrich Bayırlı/Kammer cb03a9b6a2 gnu: ecl: Update to version 15.2.21. 
* gnu/packages/lisp.scm (ecl): Update to version 15.2.21, and disable the test
  suite because ECL now fails to initialize during 'make check'.
 2015-03-01 21:29:33 +01:00
Mathieu Lirzin 76212b57f6 gnu: Add xbindkeys. 
* gnu/packages/xdisorg.scm (xbindkeys): New variable.
 2015-03-01 11:22:19 -05:00
Ricardo Wurmus eb0fb087b9 gnu: Add AlsaModularSynth. 
* gnu/packages/audio.scm (alsa-modular-synth): New variable.
 2015-03-01 17:07:51 +01:00
Ricardo Wurmus 631ac903b6 gnu: Add clalsadrv. 
* gnu/packages/audio.scm (clalsadrv): New variable.
 2015-03-01 17:07:44 +01:00
Ludovic Courtès 87c8b92f50 gnu: commencement: Make UTF-8 locales available right after 'guile-final'. 
In <http://hydra.gnu.org/build/263170>, we see:

   153: 12 [patch-usr-bin-file #:native-inputs #f ...]

  [...]

     ?: 1 [regexp-exec # ...]
  In ice-9/boot-9.scm:
   106: 0 [#<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)> encoding-error ...]

  ice-9/boot-9.scm:106:20: In procedure #<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)>:
  ice-9/boot-9.scm:106:20: Throw to key `encoding-error' with args `("scm_to_stringn" "cannot convert narrow string to output locale" 84 #f #f)'.

This is due to that fact that 'patch-/usr/bin/file' read a line
containing a byte sequence with bytes > 127 (namely a copyright sign.)
But this build was running with a C locale, and so those bytes cannot be
represented in that locale, hence this error.

This commit makes the UTF-8 locales available earlier such that
everything can be represented in locale encoding.

* gnu/packages/commencement.scm (glibc-utf8-locales-final): Move
  earlier; change "gzip" input to GZIP built with %BOOT4-INPUTS.
  (%boot5-inputs): Define to %BOOT4-INPUTS plus
  GLIBC-UTF8-LOCALES-FINAL.
  (gnu-make-final, coreutils-final, grep-final): Use it instead of
  %BOOT4-INPUTS.
  (gzip-final): Remove.
  (%boot6-inputs): New variable.
  (%final-inputs): Use it instead of %BOOT5-INPUTS.  Don't rely on
  GZIP-FINAL.
 2015-03-01 17:03:04 +01:00
宋文武 8ccf68f9e0 gnu: xfwm4: Add inputs libdrm and libxdamage. 
* gnu/packages/xfce.scm (xfwm4): Add libdrm and libxdamage to inputs.
 2015-03-01 18:41:57 +08:00
宋文武 39a4d761c7 gnu: xfwm4: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfwm4): Update 4.12.0.
 2015-03-01 18:41:02 +08:00
宋文武 046bcf2952 gnu: xfdesktop: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfdesktop): Update to 4.12.0.
 2015-03-01 18:38:52 +08:00
宋文武 ad1540062b gnu: thunar-volman: Update to 0.8.1. 
* gnu/packages/xfce.scm (thunar-volman): Update to 0.8.1.
 2015-03-01 18:38:39 +08:00
宋文武 78daf79be1 gnu: thunar: Update to 1.6.6. 
* gnu/packages/xfce.scm (thunar): Update to 1.6.6.
 2015-03-01 18:38:22 +08:00
宋文武 2998f7181f gnu: xfce4-settings: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfce4-settings): Update to 4.12.0.
 2015-03-01 18:38:06 +08:00
宋文武 3d75c320fa gnu: xfce4-session: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfce4-session): Update to 4.12.0.
 2015-03-01 18:37:54 +08:00
宋文武 be3db25a52 gnu: xfce4-appfinder: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfce4-appfinder): Update to 4.12.0.
 2015-03-01 18:37:37 +08:00
宋文武 bcd54994f0 gnu: xfce4-panel: Update to 4.12.0. 
* gnu/packages/xfce.scm (xfce4-panel): Update to 4.12.0.
 2015-03-01 18:37:20 +08:00
宋文武 3786be080f gnu: tumbler: Update to 0.1.31. 
* gnu/packages/xfce.scm (tumbler): Update to 0.1.31.
 2015-03-01 18:37:04 +08:00
宋文武 ea3fb8f183 gnu: garcon: Update to 0.4.0. 
* gnu/packages/xfce.scm (garcon): Update to 0.4.0.
 2015-03-01 18:36:48 +08:00
宋文武 9ade90ae52 gnu: exo: Update to 0.10.3. 
* gnu/packages/xfce.scm (exo): Update to 0.10.3.
 2015-03-01 18:36:26 +08:00
宋文武 7379ffc1a0 gnu: libxfce4ui: Update to 4.12.0. 
* gnu/packages/xfce.scm (libxfce4ui): Update to 4.12.0.
 2015-03-01 18:36:12 +08:00
宋文武 96fffedea0 gnu: libxfce4util: Update to 4.12.1. 
* gnu/packages/xfce.scm (libxfce4util): Update to 4.12.1.
 2015-03-01 18:35:14 +08:00
Ludovic Courtès ec4a4c46ef services: xorg: Fix file descriptor leak from SLiM/xinitrc. 
Previously processes started from the window manager would have a couple
of leaked file descriptors: writable /var/log/slim.log and readable
/gnu/store/…-xinitrc.

* gnu/services/xorg.scm (xinitrc)[builder]: Add 'close-all-fdes'.  Use
  it in 'exec-from-login-shell'.
 2015-03-01 00:25:30 +01:00
Ricardo Wurmus 74bbf89495 gnu: Add zita-alsa-pcmi. 
* gnu/packages/audio.scm (zita-alsa-pcmi): New variable.
 2015-02-28 22:30:19 +01:00
Ricardo Wurmus 8fb79e3dfb gnu: Add LV2 mda EPiano plugin. 
* gnu/packages/audio.scm (lv2-mdaepiano): New variable.
 2015-02-28 22:29:57 +01:00