nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity
28,788 Commits 1 Branch 0 Tags 104 MiB
Commit Graph

23787 Commits

Author SHA1 Message Date
ng0 b4cb9308f7
gnu: Add cwm. 
* gnu/packages/wm.scm (cwm): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-22 14:24:02 -05:00
Efraim Flashner 8528080405
gnu: dolphin-emu: Shorten the source snippet. 
* gnu/packages/emulators.scm (dolphin-emu): Rewrite the source snippet
to be more compact.
 2018-02-22 21:02:56 +02:00
Efraim Flashner e89bfc2dfd
gnu: dolphin-emu: Enable building on aarch64-linux. 
* gnu/packages/emulators.scm (dolphin-emu)[supported-systems]: Add
aarch64-linux.
 2018-02-22 21:02:53 +02:00
Oleg Pykhalov fd7da5b9e3
gnu: mlt: Fix compilation against glibc 2.26. 
* gnu/packages/video.scm (mlt)[source](snippet, modules): New fields.
 2018-02-22 21:43:20 +03:00
Tobias Geerinckx-Rice 58246f9650
gnu: strongswan: Separate phases. 
* gnu/packages/networking.scm (strongswan)[arguments]: Split
‘adjust-to-environment’ phase into ‘patch-command-file-names’ and
‘set-up-test-environment’.
 2018-02-22 17:24:37 +01:00
Tobias Geerinckx-Rice c85eca6253
gnu: strongswan: Update to 5.6.2. 
* gnu/packages/networking.scm (strongswan): Update to 5.6.2.
 2018-02-22 17:24:37 +01:00
Tobias Geerinckx-Rice 8e6b131baa
gnu: pumpa: Update to 0.9.3. 
* gnu/packages/pumpio.scm (pumpa): Update to 0.9.3.
[arguments]: Substitute INVOKE for SYSTEM*.
 2018-02-22 17:24:36 +01:00
Tobias Geerinckx-Rice e39631a9e1
gnu: mit-scheme: Update phase style. 
* gnu/packages/scheme.scm (mit-scheme)[arguments]: Use INVOKE and end
phases with #t.
 2018-02-22 17:24:36 +01:00
Tobias Geerinckx-Rice 4eb0f5cdd9
gnu: po4a: Update home page. 
* gnu/packages/gettext.scm (po4a)[home-page]: Update.
 2018-02-22 17:24:36 +01:00
Marius Bakke bb2a95580e
gnu: libx264: Change to stable branch. 
Fixes <https://bugs.gnu.org/30573>.
Reported by George myglc2 Clemmer <myglc2@gmail.com>

* gnu/packages/video.scm (libx264)[source]: Use 'stable' snapshot.
 2018-02-22 15:32:48 +01:00
Marius Bakke 9cf2de87d2
gnu: ccid: Update to 1.4.29. 
* gnu/packages/security-token.scm (ccid): Update to 1.4.29.
 2018-02-22 14:35:51 +01:00
Björn Höfling a2a532742a
gnu: Add spatialite-gui. 
* gnu/packages/geo.scm (spatialite-gui): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-22 14:35:51 +01:00
Björn Höfling 1aef4222b6
Revert "gnu: Remove wxwidgets@2.8." 
This reverts commit 6f9ba4c91c.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-22 14:35:51 +01:00
Björn Höfling 22c7c77571
gnu: Add libgaiagraphics. 
* gnu/packages/geo.scm (libgaiagraphics): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-22 14:35:50 +01:00
Björn Höfling f6c507e13c
gnu: Add libspatialite. 
* gnu/packages/geo.scm (libspatialite): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-22 14:35:50 +01:00
Marius Bakke 89bc528731
gnu: libsoup: Update to 2.60.3. 
* gnu/packages/gnome.scm (libsoup): Update to 2.60.3.
 2018-02-22 14:15:17 +01:00
Marius Bakke fdc38cb6ca
gnu: fio: Update to 3.5. 
* gnu/packages/benchmark.scm (fio): Update to 3.5.
 2018-02-22 14:15:17 +01:00
Marius Bakke 149cc42239
gnu: xorgproto: Update to 2018.3. 
* gnu/packages/xorg.scm (xorgproto): Update to 2018.3.
 2018-02-22 14:15:17 +01:00
Rutger Helling 1a6734ed30
gnu: Adjust and remove copyright lines for moved packages. 
* gnu/packages/games.scm: Adjust and remove copyright lines for packages that
  got moved to emulators.scm
 2018-02-22 13:55:40 +01:00
Rutger Helling 9e1d2fbc32
gnu: Remove copyright line for moved package. 
* gnu/packages/games.scm: Remove copyright line for package that got moved to
  emulators.scm
 2018-02-22 12:38:56 +01:00
Rutger Helling 9af704c59c
gnu: Move emulation packages from games to emulators. 
* gnu/packages/games.scm (desmume) (dosbox) (emulation-station) (higan) (mgba)
  (mupen64plus-audio-sdl) (mupen64plus-core) (mupen64plus-input-sdl)
  (mupen64plus-rsp-hle) (mupen64plus-rsp-z64) (mupen64plus-ui-console)
  (mupen64plus-video-arachnoid) (mupen64plus-video-glide64)
  (mupen64plus-video-glide64mk2) (mupen64plus-video-rice)
  (mupen64plus-video-z64) (nestopia-ue) (retroarch): Move to... *
  gnu/packages/emulators.scm: ... here.
 2018-02-22 12:15:23 +01:00
Ricardo Wurmus 65c9d25739
gnu: r-qtl: Update to 1.42-8. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-8.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus 8cc41c8ff5
gnu: r-forcats: Update to 0.3.0. 
* gnu/packages/statistics.scm (r-forcats): Update to 0.3.0.
[propagated-inputs]: Add r-rlang.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus e5e56cc9eb
gnu: r-xml: Update to 3.98-1.10. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.10.
[inputs]: Add zlib.
[native-inputs]: Add pkg-config.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus 0c43f4814b
gnu: r-devtools: Update to 1.13.5. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.5.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus fae330c354
gnu: r-dbplyr: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.2.1.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus 1ea6639868
gnu: r-rlang: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.2.0.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus 5b62630280
gnu: r-knitr: Update to 1.20. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.20.
 2018-02-22 11:18:03 +01:00
Ricardo Wurmus b4c6f4caf7
gnu: r-stringr: Update to 1.3.0. 
* gnu/packages/statistics.scm (r-stringr): Update to 1.3.0.
[propagated-inputs]: Add r-glue.
 2018-02-22 11:18:02 +01:00
Ricardo Wurmus 51b7b0e30f
gnu: r-timedate: Update to 3043.102. 
* gnu/packages/cran.scm (r-timedate): Update to 3043.102.
 2018-02-22 11:18:02 +01:00
Rutger Helling e5f9ec8bc3
gnu: Add dolphin-emu. 
* gnu/packages/emulators.scm (dolphin-emu): New variable.
 2018-02-22 09:20:51 +01:00
Rutger Helling 6352e99437
gnu/local.mk: Add emulators.scm. 
* gnu/local.mk (GNU_SYSTEM_MODULES): Add emulators.scm.
 2018-02-22 09:16:19 +01:00
David Thompson 3fd2ecb338
gnu: Add wxwidgets-gtk2-3.1. 
* gnu/packages/wxwidgets.scm (wxwidgets-gtk2-3.1): New variable.

Signed-off-by: Rutger Helling <rhelling@mykolab.com>
 2018-02-22 09:07:25 +01:00
Leo Famulari 62d14d2400
gnu: mpd-mpc: Update to 0.29. 
* gnu/packages/mpd.scm (mpd-mpc): Update to 0.29.
[build-system]: Use the meson-build-system.
 2018-02-22 01:40:29 -05:00
Leo Famulari 943100f61d
gnu: mpd: Update to 0.20.17. 
* gnu/packages/mpd.scm (mpd): Update to 0.20.17.
[source]: Use HTTPS URL.
 2018-02-22 01:40:28 -05:00
Leo Famulari c59ea46fd1
gnu: libmpdclient: Update to 2.14. 
* gnu/packages/mpd.scm (libmpdclient): Update to 2.14.
[source]: Use HTTPS URL.
 2018-02-22 01:40:24 -05:00
Oleg Pykhalov 659f790b3f
gnu: Add emacs-edit-indirect. 
* gnu/packages/emacs.scm (emacs-edit-indirect): New public variable.
 2018-02-21 22:29:41 +03:00
Leo Famulari 22261238e7
gnu: mbedtls-apache: Update to 2.7.0 [security fixes]. 
Fixes CVE-2017-18187 and CVE-2018-{0487,0488}.

* gnu/packages/tls.scm (mbedtls-apache): Update to 2.7.0.
 2018-02-21 14:28:03 -05:00
Danny Milosavljevic a0343008dc
gnu: libx264: Use nasm. 
Follow-up to a33727db1b.

* gnu/packages/video.scm (libx264)[native-inputs]: Replace yasm by nasm.
 2018-02-21 20:27:01 +01:00
Efraim Flashner a33727db1b
gnu: libx264: Update to 20180219-2245. 
* gnu/packages/video.scm (libx264): Update to 20180219-2245.
 2018-02-21 19:29:32 +02:00
Tobias Geerinckx-Rice a89e0cf581
gnu: lpsolve: Update to 5.5.2.5. 
* gnu/packages/maths.scm (lpsolve): Update to 5.5.2.5.
 2018-02-21 15:02:49 +01:00
Tobias Geerinckx-Rice 453c002679
gnu: shflags: Update to 1.2.3. 
* gnu/packages/version-control.scm (shflags): Update to 1.2.3.
[arguments]: Match new sources layout.
 2018-02-21 15:02:49 +01:00
Tobias Geerinckx-Rice dcb06ac9cf
gnu: shflags: Use the GNU-BUILD-SYSTEM. 
The TRIVIAL-BUILD-SYSTEM doesn't really save any effort and is actually
slightly longer.

* gnu/packages/version-control.scm (shflags)[build-system: Use
GNU-BUILD-SYSTEM.
[arguments]: Adjust accordingly and prefer INSTALL-FILE over COPY-FILE.
 2018-02-21 15:02:49 +01:00
Tobias Geerinckx-Rice 79f0561f43
gnu: htop: Fix tree view. 
* gnu/packages/patches/htop-fix-process-tree.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (htop)[source]: Use it.
 2018-02-21 15:02:49 +01:00
Tobias Geerinckx-Rice 6c96b5452c
gnu: lpsolve: Update phase style. 
* gnu/packages/maths.scm (lpsolve)[arguments]: Use INVOKE and
INSTALL-FILE, and end phases with #t.
 2018-02-21 15:02:48 +01:00
Tobias Geerinckx-Rice be5dc5fb18
gnu: iptables: Edit synopsis & description. 
* gnu/packages/linux.scm (iptables)[synopsis, description]: Improve.
 2018-02-21 15:02:48 +01:00
Tobias Geerinckx-Rice 4f3bf2059e
gnu: iptables: Update to 1.6.2. 
* gnu/packages/linux.scm (iptables): Update to 1.6.2.
 2018-02-21 15:02:48 +01:00
Tobias Geerinckx-Rice 9a9d64eaf9
gnu: lout: Update phase style. 
* gnu/packages/lout.scm (lout)[arguments]: Write phases in-line, use
MODIFY-PHASES syntax, INVOKE, and WITH-DIRECTORY-EXCURSION, and end
phases with #t.  Re-indent the result.
 2018-02-21 15:02:48 +01:00
Tobias Geerinckx-Rice ea5d238dae
gnu: cook: Update phase style. 
* gnu/packages/cook.scm (cook)[arguments]: Use MODIFY-PHASES syntax and
end phase with #t.
 2018-02-21 15:02:47 +01:00
Tobias Geerinckx-Rice 61faf24df6
gnu: slang: Update to 2.3.1a. 
* gnu/packages/slang.scm (slang): Update to 2.3.1a.
 2018-02-21 15:02:47 +01:00
Tobias Geerinckx-Rice 20e73f5b58
gnu: shflags: Set source file name. 
* gnu/packages/version-control.scm (shflags)[source]: Use a meaningful
FILE-NAME.
 2018-02-21 15:02:47 +01:00
Tobias Geerinckx-Rice 219ec95c90
gnu: getmail: Update to 5.5. 
* gnu/packages/mail.scm (getmail): Update to 5.5.
 2018-02-21 15:02:46 +01:00
Danny Milosavljevic 781d721a82
gnu: ldc: Add comment. 
* gnu/packages/ldc.scm (ldc): Add comment.
 2018-02-21 12:07:13 +01:00
Danny Milosavljevic a4960a204d
gnu: dub: Use invoke. 
* gnu/packages/ldc.scm (dub): Use invoke.
 2018-02-21 02:52:01 +01:00
Danny Milosavljevic 12479d58be
gnu: rdmd: Use invoke. 
* gnu/packages/ldc.scm (rdmd): Use invoke.
 2018-02-21 02:51:13 +01:00
Danny Milosavljevic 736e45a278
services: slim: Make the logged-in session show up in "w". 
* gnu/services/xorg.scm (slim-shepherd-service): Use SESSREG to register X11
session.
* doc/guix.texi (slim-configuration): Document new field "sessreg".
 2018-02-20 21:15:54 +01:00
Pjotr Prins 1b541c3e93
gnu: ldc: Update to 1.7.0. 
Fixes recent bootstrap and updates ldc and package manager to match.

* gnu/packages/ldc.scm (ldc-bootstrap): Update to 0.17.4.
[properties]: Add max-slient-time.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
(ldc): Update to 1.7.0.
(ldc-beta): Delete variable.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
[arguments]<#:phases>[check]: Use invoke.
(rdmd): Update to 2.077.1.
(dub): Update to 1.7.2.
* gnu/local.mk (dist_patch_DATA): Remove "ldc-disable-tests.patch".
Add "ldc-bootstrap-disable-tests.patch".
Remove "ldc-1.1.0-disable-phobos-tests.patch".
Add "ldc-1.7.0-disable-phobos-tests.patch".
Remove "ldc-1.1.0-disable-dmd-tests.patch".

Co-Authored-By: Danny Milosavljevic <dannym@scratchpost.org>
 2018-02-20 19:36:34 +01:00
Marius Bakke 5dd53cbf56
gnu: nginx: Update to 1.13.9. 
* gnu/packages/web.scm (nginx): Update to 1.13.9.
 2018-02-20 19:05:13 +01:00
Marius Bakke d64bcccf43
gnu: grub: Run tests against Qemu 2.10. 
* gnu/packages/bootloaders.scm (qemu-minimal-2.10): New variable.
(grub)[native-inputs]: Replace QEMU-MINIMAL with QEMU-MINIMAL-2.10.
 2018-02-20 18:23:14 +01:00
Marius Bakke 5fa6b52a54
gnu: qemu: Update to 2.11.1. 
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.11.1
[source](patches): Remove.
 2018-02-20 17:44:43 +01:00
Marius Bakke b1989c1250
gnu: freetype: Fix CVE-2018-6942. 
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
 2018-02-20 16:26:20 +01:00
Marius Bakke fb9d035015
gnu: python-pyopenssl: Update to 17.5.0. 
* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 17.5.0.
 2018-02-20 16:03:07 +01:00
Marius Bakke 0ba631b90f
gnu: python-cryptography: Update to 2.1.4. 
* gnu/packages/python-crypto.scm (python-cryptography-vectors,
python-cryptography): Update to 2.1.4.
 2018-02-20 16:03:00 +01:00
Marius Bakke 5c73e162e2
gnu: imagemagick: Update to 6.9.9-35. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-35.
 2018-02-20 15:04:28 +01:00
Marius Bakke 1eaba63f73
gnu: calendar.scm: Use license: prefix. 
* gnu/packages/calendar.scm (libical, khal, remind, libhdate): Use license: prefix.
 2018-02-20 14:58:52 +01:00
Marius Bakke 9d13e77adb
gnu: rrdtool: Use a fixed version of tzdata for tests. 
* gnu/packages/rrdtool.scm (rrdtool)[native-inputs]: Replace TZDATA with
TZDATA-FOR-TESTS.
 2018-02-20 14:58:52 +01:00
Tobias Geerinckx-Rice 775989c7a8
gnu: nix, patchelf: Use HTTPS for nixos.org home pages. 
* gnu/packages/elf.scm (patchelf)[home-page]: Use HTTPS.
* gnu/packages/package-management.scm (nix)[home-page]: Likewise.
 2018-02-20 05:02:44 +01:00
Tobias Geerinckx-Rice ba3913a5d3
gnu: font-hack: Update to 3.002. 
* gnu/packages/fonts.scm (font-hack): Update to 3.002.
 2018-02-20 03:31:09 +01:00
Tobias Geerinckx-Rice 1f577b469a
gnu: chromaprint: Update to 1.4.3. 
* gnu/packages/mp3.scm (chromaprint): Update to 1.4.3.
[source]: Update URI.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 6080632df8
gnu: socat: Update to 1.7.3.2. 
* gnu/packages/networking.scm (socat): Update to 1.7.3.2.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 5404f1c29d
gnu: setbfree: Update to 0.8.5. 
* gnu/packages/music.scm (setbfree): Update to 0.8.5.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 48fbb24c90
gnu: ola: Update to 0.10.6. 
* gnu/packages/lighting.scm (ola): Update to 0.10.6.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 8af77fe96b
gnu: pciutils: Use HTTPS home page. 
* gnu/packages/pciutils.scm (pciutils)[home-page]: Use HTTPS.
 2018-02-19 23:14:01 +01:00
ng0 54a402ddd1
gnu: neomutt: Update to 20171215. 
* gnu/packages/mail.scm (neomutt): Update to 20171215.
[inputs]: Move "docbook-xsl" to [native-inputs].
[native-inputs]: Remove "autoconf". Add "tcl", "docbook-xml", "w3m".
[argumnets]: Switch to autosetup based build. Add new phases "fix-sasl-test",
"fix-docbook". Remove phase "autoconf".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:31:09 +01:00
mephi42 b91004c2f5
gnu: Add basic support for s390x-linux-gnu targets. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
  "s390x-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "s390"
  prefix.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:22:21 +01:00
Ludovic Courtès 900be977ae
tests: Remove outdated comment. 
* gnu/tests/base.scm (run-basic-test): Remove outdated comment.
 2018-02-19 22:04:11 +01:00
Ludovic Courtès 27a2c9c3e0
marionette: Use QEMU's "VM channel" mechanism. 
* gnu/tests.scm (<marionette-configuration>)[device]: Default to
"/dev/virtio-ports/org.gnu.guix.port.0".
* gnu/tests.scm (marionette-shepherd-service): Remove (guix build
syscalls) from 'modules'.  Remove 'tcsetattr' call from 'start'.
* gnu/build/marionette.scm (make-marionette): Use "-virtserialport"
instead of "-virtconsole".
 2018-02-19 22:04:11 +01:00
Ludovic Courtès ce0a62f6c5
services: console-font: Don't emit the IUTF8 console code. 
Fixes <https://bugs.gnu.org/30505>.

* gnu/services/base.scm (unicode-start): Remove 'display' call to FD for
"\x1b%G" console code.
 2018-02-19 22:04:10 +01:00
Hartmut Goebel 7e4e3df4e8
gnu: qqc2-desktop-style: Fix missing input 'qtquickcontrols2'. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style)<inputs>:
  Add qtquickcontrols2.
 2018-02-19 20:30:53 +01:00
Ricardo Wurmus 21169e3148
gnu: mcomix: Disable tests. 
* gnu/packages/image-viewers.scm (mcomix)[arguments]: Disable tests.

Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30523>.
 2018-02-19 18:33:19 +01:00
Ricardo Wurmus ab36fb17e6
gnu: nss-pam-ldapd: Update to 0.9.9. 
* gnu/packages/openldap.scm (nss-pam-ldapd): Update to 0.9.9.
 2018-02-19 18:16:16 +01:00
Marius Bakke 5f3155ee6c
gnu: ddrescue: Update to 1.23. 
* gnu/packages/disk.scm (ddrescue): Update to 1.23.
 2018-02-19 17:47:11 +01:00
Marius Bakke 4dc159bb62
gnu: ffmpeg@2.8: Update to 2.8.14. 
* gnu/packages/video.scm (ffmpeg-2.8): Update to 2.8.14.
 2018-02-19 15:03:44 +01:00
Rutger Helling 4ecfc16839
gnu: xpra: Disable abstract X11 sockets. 
* gnu/packages/xorg.scm (xpra): Disable abstract X11 sockets.
 2018-02-19 12:56:47 +01:00
Efraim Flashner d81a739a1f
gnu: clisp: Fix building on aarch64-linux. 
* gnu/packages/lisp.scm (clisp)[arguments]: Remove 'bindings/glibc' module.
 2018-02-19 11:30:48 +02:00
Ricardo Wurmus 79c6af13d0
gnu: r-delayedmatrixstats: Update to 1.0.3. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.0.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus 59b2864d6c
gnu: r-scater: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus d578278e35
gnu: r-gviz: Update to 1.22.3. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus ca7855fcd2
gnu: r-gprofiler: Update to 0.6.4. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 8877ab432e
gnu: r-ensembldb: Update to 2.2.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus ebec98ae1d
gnu: r-seurat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1.
[propagated-inputs]: Remove r-nmf; add r-metap.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 3118b28644
gnu: r-qtl: Update to 1.42-7. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 824c200475
gnu: r-genomicranges: Update to 1.30.2. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus e8484711c6
gnu: r-getopt: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 1e898bbaea
gnu: r-pryr: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 50ee54eabd
gnu: r-bh: Update to 1.66.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.66.0-1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus ffa7fe3062
gnu: r-nlme: Update to 3.1-131.1. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-131.1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 9800f7d9e8
gnu: r-bookdown: Update to 0.7. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.7.
[propagated-inputs]: Add r-tinytex.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 4376166b03
gnu: Add r-metap. 
* gnu/packages/cran.scm (r-metap): New variable.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 846f4c2303
gnu: Add r-tinytex. 
* gnu/packages/cran.scm (r-tinytex): New variable.
 2018-02-19 09:53:04 +01:00
Rutger Helling a754c79013
gnu: youtube-dl: Update to 2018.02.11. 
* gnu/packages/video.scm (youtube-dl): Update to 2018.02.11.
 2018-02-19 09:22:47 +01:00
Rutger Helling 90e37ea088
gnu: retroarch: Update to 1.7.1. 
* gnu/packages/games.scm (retroarch): Update to 1.7.1.
 2018-02-19 08:12:59 +01:00
Tobias Geerinckx-Rice 77659ff3ad
gnu: iverilog: Use Texinfo in description. 
* gnu/packages/fpga.scm (iverilog)[description]: Substitute @command for
inverted commas.
 2018-02-19 06:00:33 +01:00
Tobias Geerinckx-Rice c046904d74
gnu: iverilog: Update to 10.2. 
* gnu/packages/fpga.scm (iverilog): Update to 10.2.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice 05ee510272
gnu: nyacc: Update to 0.83.3. 
* gnu/packages/mes.scm (nyacc): Update to 0.83.3.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice e51b3145ca
gnu: nasm: Update to 2.13.03. 
* gnu/packages/assembly.scm (nasm): Update to 2.13.03.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice 0bd8d6dc28
gnu: ccache: Update to 3.4.1. 
* gnu/packages/ccache.scm (ccache): Update to 3.4.1.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice 16cb3b8fe0
gnu: lsof: Run tests. 
* gnu/packages/lsof.scm (lsof)[arguments]: Remove untrue #:TESTS?.
Add ‘disable-failing-tests’ and ‘check’ phases to run them.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice c2799070ca
gnu: lsof: Remove build timestamp. 
* gnu/packages/lsof.scm (lsof)[arguments]: Add ‘patch-timestamps’ phase.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice b7fd3e96c7
gnu: lsof: Update phase style. 
* gnu/packages/lsof.scm (lsof)[arguments]: Substitute INVOKE for SYSTEM*
and end phases with #t.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice 57774ae150
gnu: lsof: Make perl a native input. 
* gnu/packages/lsof.scm (lsof)[inputs]: Move perl from here...
[native-inputs]: ...to here.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice cb443e55dc
gnu: lsof: Factorise source URIs. 
* gnu/packages/lsof.scm (%ftp-base): Remove variable.
(lsof)[source]: Construct mirror URI list programatically.
 2018-02-19 06:00:28 +01:00
Tobias Geerinckx-Rice 5ae76e8f16
gnu: lsof: Replace dead mirror. 
* gnu/packages/lsof.scm (lsof)[source]: Replace sunsite.ualberta.ca with
mirrorservice.org, which offers both HTTP and FTP services.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice 7268563be5
gnu: dvdstyler: Update to 3.0.4. 
* gnu/packages/cdrom.scm (dvdstyler): Update to 3.0.4.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice 14eb54349a
gnu: perl-xml-sax: Update to 1.00. 
* gnu/packages/xml.scm (perl-xml-sax): Update to 1.00.
 2018-02-19 06:00:26 +01:00
Tobias Geerinckx-Rice 6208fcf742
gnu: perl-importer: Update to 0.025. 
* gnu/packages/perl.scm (perl-importer): Update to 0.025.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice 780fa70cd3
gnu: perl-params-validationcompiler: Update to 0.27. 
* gnu/packages/perl.scm (perl-params-validationcompiler): Update to 0.27.
[native-inputs]: Add perl-type-tiny for another test.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice 9c22b13136
gnu: xinetd: Don't hard-code tarball version. 
* gnu/packages/web.scm (xinetd)[source]: Construct URI using VERSION.
 2018-02-19 06:00:24 +01:00
Tobias Geerinckx-Rice 96d47129f6
gnu: ncftp: Update to 3.2.6. 
* gnu/packages/ftp.scm (ncftp): Update to 3.2.6.
[source]: Use .xz instead of (discontinued) .bz2 tarball.
 2018-02-19 06:00:23 +01:00
Tobias Geerinckx-Rice 9e7f1d103d
gnu: knot: Update to 2.6.5. 
* gnu/packages/dns.scm (knot): Update to 2.6.5.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice 331ebb7f94
gnu: awscli: Update to 1.14.41. 
* gnu/packages/python-web.scm (awscli): Update to 1.14.41.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice 659fef8ddb
gnu: libfilezilla: Update to 0.12.0. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.12.0.
 2018-02-19 05:57:18 +01:00
Tobias Geerinckx-Rice eae7ece1af
gnu: erlang: Use HTTPS home page. 
* gnu/packages/erlang.scm (erlang)[home-page]: Use HTTPS with the new
canonical domain.
 2018-02-19 05:57:17 +01:00
okapi 2922852e86
gnu: Add gzdoom. 
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
okapi 9073c8758c
gnu: Add fluid-3. 
* gnu/packages/audio.scm (fluid-3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
Ludovic Courtès 5912791655
gnu: guix: Update snapshot to bdf0c64. 
* gnu/packages/package-management.scm (guix): Update to bdf0c64.
[arguments] <copy-bootstrap-guile>: Move after 'check' phase.  Rewrite
to use "guix download" and to intern only one or two tarballs.
[inputs]: Remove "boot-guile/*".  Add "boot-guile" and, optionally,
"boot-guile/i686".
 2018-02-19 00:33:34 +01:00
Ludovic Courtès 37084ba561
services: avahi: Publish '_workstation._tcp' by default. 
This reverts to the behavior of avahi-daemon prior to Avahi 0.7 (commit
550f4509ac).

* gnu/services/avahi.scm (<avahi-configuration>)[publish-workstation?]:
New field.
(configuration-file): Honor it.
 2018-02-19 00:33:34 +01:00
Ludovic Courtès ad7a807d84
services: avahi: Read PID file from /run. 
* gnu/services/avahi.scm (%avahi-activation, avahi-shepherd-service):
Use /run/avahi-daemon/ instead of /var/run/avahi-daemon/.  This was the
case since the switch to Avahi 0.7 (commit
550f4509ac).
 2018-02-19 00:33:34 +01:00
Marius Bakke 418cbf6e22
gnu: qt.scm: Remove unneeded import. 
* gnu/packages/qt.scm (define-module): Don't import (gnu packages base).
 2018-02-18 20:44:19 +01:00
Marius Bakke 5ce3f93bc5
gnu: Add xorgproto. 
* gnu/packages/xorg.scm (xorgproto): New public variable.
 2018-02-18 20:23:45 +01:00
Marius Bakke 1ac1872161
gnu: lvm2: Remove obsolete phase. 
* gnu/packages/linux.scm (lvm2)[arguments]: Remove MAKE-OBJECTS-WRITABLE-PHASE.
 2018-02-18 20:13:42 +01:00
Marius Bakke c06bf6a3e2
gnu: argon2: Update to 20171227. 
* gnu/packages/password-utils.scm (argon2): Update to 20171227.
[arguments]: Add OPTTEST=1 to #:make-flags to prevent "-march=native".  Remove
custom install phase.  Add 'patch-Makefile' phase.
[license]: Add ASL2.0.
 2018-02-18 20:13:42 +01:00
Hartmut Goebel 102fc5bc29
gnu: Add qqc2-desktop-style. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style): New
  variable.
 2018-02-18 19:21:41 +01:00
Hartmut Goebel ac5f3988c4
gnu: knotifications: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (knotifications)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel 96e622f15d
gnu: ktextwidgets: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (ktextwidgets)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel bb8d1b2a72
gnu: qca: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (qca)[source]: Use mirror://kde scheme.
 2018-02-18 19:21:39 +01:00
Hartmut Goebel 343bffbd79
gnu: snorenotify: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (snorenotify)[source]: Use mirror://kde scheme.
 2018-02-18 19:21:38 +01:00
Hartmut Goebel 352e14d87c
gnu: libkomparediff2: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (libkomparediff2)[source]: Use mirror://kde
  scheme.
 2018-02-18 19:21:38 +01:00
Hartmut Goebel 3600001693
gnu: libkomparediff2: Update to 17.12.1 
* gnu/packages/kde.scm(libkomparediff2): Update to 17.12.1.
  [source] Switch to KDE mirror, use mirror://kde scheme.
 2018-02-18 19:21:37 +01:00
Hartmut Goebel c8c06bf5b0
gnu: libksysguard: Update to 5.11.5. 
* gnu/packages/kde.scm (libksysguard: Update to 5.11.5).
 2018-02-18 19:21:36 +01:00
Hartmut Goebel bd533cbb7f
gnu: kpmcore: Update to 3.3.0 
* gnu/packages/kde-frameworks.scm (kpmcore): Update to 3.3.0.
 2018-02-18 19:21:36 +01:00
Hartmut Goebel 431ff8bea3
gnu: kde-frameworks: Update to 5.42.0 resp. 5.42.1 
Beside simple updating:
- Change all todo-comments for test-cases into "fixme" comments to make them
  easier to find.
- breeze-icons: Blacklist a test failing at build.kde.org, too.
- extra-cmake-modules: Patch out a vanised test-case.
- kfilemetadata: Can now run the test-suite uninstalled. Blacklist a failing
  test-case.
- kimageformats: No longer symlink plugins into ./bin for testing.
- ktexteditor: Remove now unused patch.
- plasma-framework: Add input kirigami
- sonnet: For testing set QT_QPA_PLATFORM=offscreen.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, kactivities,
  kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs,
  kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons,
  kde-frameworkintegration, kdeclarative, kded, kdelibs4support,
  kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons,
  kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kinit, kio,
  kirigami, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwindowsystem, kxmlgui,
  kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons,
  prison, solid, threadweaver): Update to 5.42.0.
  (kwidgetsaddons): Update to 5.42.1.
  (breeze-icons): Update to 5.42.0. [#:phases]<disable-failing-test> New
  phase.
  (extra-cmake-modules): Update to 5.42.0.
  [#:phases]<post-5.42.0-release-fix>: New phase.
  (kfilemetadata): Update to 5.42.0. [#:phases]: No longer move check behind
  install. [#:phases]<check-setup> Remove. [#:phase]<disable-failing-test> New
  phase.
  (kimageformats): Update to 5.42.0. [#:phases]<check-setup>: No longer
  symlink plugins into ./bin.
  (ktesteditor)[source]: Remove patch.
  (plasma-framework)[inputs]: Add  kirigami
  (sonnet): Update to 5.42.0. [#:phases]<check-setup> New phase.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-02-18 19:21:35 +01:00
Hartmut Goebel 042f7c2636
gnu: qtserialport: Use the store paths for dynamically loaded libs. 
Transfer the applicable NixOS patches for qtserialport as of 2018-01-19:

- src/serialport/qtudev_p.h: Transferred: Use hard-coded path to libudev.

* gnu/packages/qt.scm(qtserialport)[#:phases]<patch-dlopen-paths>:
  New phase.
 2018-02-18 18:39:19 +01:00
Hartmut Goebel 64f390a409
gnu: qtbase: Use the store paths for other packages and dynamically loaded libs. 
Transfer the applicable NixOS patches as of 2018-01-19:

- Not adopted: We don't change the .cmake.in and .prf, but use config
  mechanisms provided by th Qt build system.

- src/corelib/tools/qtimezoneprivate_tz.cpp: Adopted patch: Use $TZDIR to
  search for time-zone data. Thus avoid depending on package "tzdata", which
  often introduces changes with near-immediate effects, so it's important to
  be able to update it fast.

- src/corelib/kernel/qcoreapplication.cpp: Not adopted: NixOS adds plugin
  paths derived from PATH. We do not need this, since we already have
  native-search-path QT_PLUGIN_PATH.

- src/network/kernel/qdnslookup_unix.cpp,
  src/network/kernel/qhostinfo_unix.cpp: Transferred: Use hard-coded path to
  libresolv.

- src/network/ssl/qsslcontext_openssl.cpp: Not adopted: NixOS changes a
  conditional compilation for Qt 5.9 (but leaves it unchanged for Qt 5.10) to
  fix compilation with libressl.  But Qt does not support libressl anway, see
  config.tests/openssl/openssl.cpp in qtbase 5.9.4.

- src/plugins/platforminputcontexts/compose/generator/qtablegenerator.cpp:
  Transferred: Use hard-coded path to libx11.

- src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp:
  Transferred: Use hard-coded path to mess's libGL, no need for a fall-back.

- src/plugins/platforms/xcb/qxcbcursor.cpp: Transferred: Use hard-coded path
  to Xcursor.

- src/plugins/platformthemes/gtk3/main.cpp: Not adopted: NixOS changes
  $XDG_DATA_DIRS and $GIO_EXTRA_MODULES in the code. We already have a
  search-path-specification for this.

- src/testlib/qtestassert.h: Decided not to adopt this for guix.

* gnu/packages/patches/qtbase-use-TZDIR.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase): Add comment. [source]: Use new patch.
  [arguments]<#:phases>'patch-paths': New phase.
 2018-02-18 18:39:18 +01:00
Alex Vong bdf0c644da
gnu: python2-django-mailman3: Update to 1.1.0. 
* gnu/packages/python.scm (python2-django-mailman3): Update to 1.1.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:37:51 +01:00
Alex Vong c115a1c8d7
gnu: python-mailmanclient: Update to 3.1.1. 
* gnu/packages/python.scm (python-mailmanclient, python2-mailmanclient):
Update to 3.1.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:36:52 +01:00
Alex Vong 98b90194d3
gnu: haskell: Use HTTPS where possible. 
* gnu/packages/haskell.scm (cl-yale-haskell)[source, home-page]: Use HTTPS.
(ghc-libxml)[source, home-page]: Likewise.
(ghc-haddock-library)[home-page]: Likewise.
(ghc-haddock-api)[home-page]: Likewise.
(ghc-haddock)[home-page]: Likewise.
(ghc-simple-reflect)[home-page]: Likewise.
(ghc-alex)[home-page]: Likewise.
(ghc-concatenative)[description]: Likewise.
(ghc-openglraw)[home-page]: Likewise.
(ghc-glut)[home-page]: Likewise.
(ghc-gluraw)[home-page]: Likewise.
(ghc-opengl)[home-page]: Likewise.
(cabal-install)[home-page]: Likewise.
(ghc-mtl)[description]: Likewise.
(ghc-temporary)[home-page]: Likewise.
(ghc-temporary-rc)[home-page]: Likewise.
(ghc-fgl)[home-page]: Likewise.
(ghc-blaze-markup)[home-page]: Likewise.
(ghc-doctest)[description]: Likewise.
(ghc-scientific)[description]: Likewise.
(ghc-regex-pcre-builtin)[description]: Likewise.
(ghc-diff)[home-page]: Likewise.
(ghc-highlighting-kate)[description]: Likewise.
(ghc-hslua)[description]: Likewise.
(ghc-pandoc)[home-page]: Likewise.
(ghc-rfc5051)[home-page]: Likewise.
(ghc-data-ordlist)[home-page]: Likewise.
(ghc-regex-compat-tdfa)[home-page]: Likewise.
(ghc-sandi)[home-page]: Likewise.
(ghc-bytestring-handle)[home-page]: Likewise.
(ghc-tar)[home-page]: Likewise.
(ghc-transformers)[home-page]: Likewise.
(ghc-patience)[home-page]: Likewise.
(ghc-monads-tf)[home-page]: Likewise.
(ghc-colour)[home-page]: Likewise.
(ghc-directory)[home-page]: Likewise.
(ghc-process)[home-page]: Likewise.
(ghc-wl-pprint-text)[home-page]: Likewise.
(ghc-fgl-arbitrary)[home-page]: Likewise.
(ghc-graphviz)[description]: Likewise.
(ghc-array)[home-page]: Likewise.
(ghc-storable-complex)[source]: Likewise.
(ghc-hmatrix)[source]: Likewise.
(ghc-hmatrix-gsl)[source]: Likewise.
(ghc-hmatrix-special)[source]: Likewise.
(ghc-hmatrix-gsl-stats)[source]: Likewise.
(ghc-easyplot)[source, home-page]: Likewise.
(ghc-hashtables)[source]: Likewise.
(ghc-data-accessor)[home-page]: Likewise.
(ghc-data-accessor-transformers)[home-page]: Likewise.
(ghc-gnuplot)[home-page]: Likewise.
(ghc-terminal-size)[home-page]: Likewise.
(ghc-language-c)[home-page]: Likewise.
(ghc-hslogger)[home-page]: Likewise.
(ghc-json)[home-page]: Likewise.
(ghc-hex)[home-page]: Likewise.
(ghc-psqueues)[description]: Likewise.
(ghc-uuid-types)[description]: Likewise.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:35:20 +01:00
Arun Isaac d72f59a4cf
gnu: swaks: Use HTTPS home page and source URIs. 
* gnu/packages/mail.scm (swaks)[source]: Use HTTPS URI.
[home-page]: Use HTTPS URI.
[arguments]: Replace system* with invoke.
 2018-02-18 18:16:49 +05:30
Arun Isaac f25e1e2448
gnu: Add python2-mapnik. 
* gnu/packages/geo.scm (python2-mapnik): New variable.
 2018-02-18 17:30:20 +05:30
Arun Isaac f2b005f630
gnu: Add mapnik. 
* gnu/packages/geo.scm (mapnik): New variable.
 2018-02-18 17:30:12 +05:30