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Author SHA1 Message Date
Jens Mølgaard 77fe52580f
gnu: Add Hindi Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-hi): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-05 17:27:22 +02:00
Jens Mølgaard c066a05094
gnu: Add Finnish Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-fi): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-05 17:27:22 +02:00
Jens Mølgaard 4bb9528c49
gnu: Add Danish Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-da): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-05 17:27:22 +02:00
Jens Mølgaard 8ac3476db7
gnu: Add Belarusian Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-be): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-05 17:27:22 +02:00
Jens Mølgaard 964595dd77
gnu: Add Arabic Aspell dictionary. 
* gnu/packages/aspell.scm (aspell-dict-ar): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-05 17:27:22 +02:00
Ludovic Courtès 0b051bacb3
installer: Always add '%base-initrd-modules' to 'initrd-modules'. 
Fixes <https://bugs.gnu.org/36099>.
Reported by Jonathan Brielmaier <jonathan.brielmaier@web.de>.

* gnu/installer/parted.scm (initrd-configuration): Add
%BASE-INITRD-MODULES to the 'initrd-modules' field.
 2019-06-05 17:27:22 +02:00
Kei Kebreau 4ab9ad1ed2
gnu: aubio: Enable avcodec support. 
* gnu/packages/audio.scm (aubio)[arguments]: Remove "--disable-avcodec" from
and add "--enable-avcodec" to #:configure-flags.
[inputs]: Add ffmpeg.
 2019-06-05 10:31:23 -04:00
Ricardo Wurmus 2ffa842b4e
gnu: guile-sdl2: Update to 0.4.0. 
* gnu/packages/sdl.scm (guile-sdl2): Update to 0.4.0.
 2019-06-05 15:47:01 +02:00
Ricardo Wurmus f6ea523749
gnu: guile-chickadee: Update to 0.4.0. 
* gnu/packages/game-development.scm (guile-chickadee): Update to 0.4.0.
[arguments]: Remove.
 2019-06-05 15:43:43 +02:00
Jan Nieuwenhuizen 898b705d64
gnu: guile-gi: Update to 0.0.1-1.26e8852. 
* gnu/packages/guile-xyz.scm (guile-gi): Update to 0.0.1-1.26e8852; use
upstream's (spk121's) git in source uri.
 2019-06-05 15:40:26 +02:00
Jonathan Brielmaier 3390ac619f
gnu: neovim: Update to 0.3.7 [security fixes]. 
* gnu/packages/vim.scm (neovim): Update to 0.3.7.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-06-05 15:24:46 +02:00
Ricardo Wurmus 1d7cf14435
gnu: eolie: Update to 0.9.62. 
* gnu/packages/gnome.scm (eolie): Update to 0.9.62.
 2019-06-05 11:53:27 +02:00
Oleg Pykhalov 9b99b349ec
gnu: Add emacs-litable. 
* gnu/packages/emacs-xyz.scm (emacs-litable): New variable.
 2019-06-05 10:15:20 +03:00
Brian Leung e912affe07
gnu: Add emacs-attrap. 
* gnu/packages/emacs-xyz.scm (emacs-attrap): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2019-06-05 08:37:17 +03:00
Brian Leung 3fef2a9dd9
gnu: Add emacs-dante. 
* gnu/packages/emacs-xyz.scm (emacs-dante): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2019-06-05 08:37:17 +03:00
Brian Leung d8bc8245a6
gnu: Add emacs-lcr. 
* gnu/packages/emacs-xyz.scm (emacs-lcr): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2019-06-05 08:37:16 +03:00
Brian Leung 68eb526c4f
gnu: Add emacs-whitespace-cleanup-mode. 
* gnu/packages/emacs-xyz.scm (emacs-whitespace-cleanup-mode): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2019-06-05 08:37:16 +03:00
Mark H Weaver 08ad449753
gnu: linux-libre: Update to 5.1.7. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.7.
(%linux-libre-hash): Update hash.
 2019-06-04 23:49:44 -04:00
Mark H Weaver 8feeeb68d3
gnu: linux-libre@4.19: Update to 4.19.48. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.48.
(%linux-libre-4.19-hash): Update hash.
 2019-06-04 23:48:52 -04:00
Marius Bakke 456ba27496
gnu: openvswitch: Update to 2.11.1. 
* gnu/packages/networking.scm (openvswitch): Update to 2.11.1.
 2019-06-05 00:37:39 +02:00
Marius Bakke 034db23701
gnu: openvswitch: Update home page. 
* gnu/packages/networking.scm (openvswitch)[source, home-page]: Use HTTPS.
 2019-06-05 00:37:39 +02:00
Marius Bakke 3588419553
gnu: polkit: Update to 0.116 [fixes CVE-2019-6133]. 
* gnu/packages/patches/polkit-CVE-2018-19788.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/polkit.scm (polkit): Update to 0.116.
[source](patches): Remove.
[inputs]: Change MOZJS-52 to MOZJS-60.
[arguments]: Add CXXFLAGS=-std=gnu++11 to #:configure-flags.
 2019-06-05 00:37:39 +02:00
Marius Bakke 261e9db2cd
gnu: e2fsprogs: Update to 1.45.2. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.45.2.
 2019-06-05 00:37:39 +02:00
Tobias Geerinckx-Rice d46fc636e6
gnu: borg: Update to 1.1.10. 
* gnu/packages/backup.scm (borg): Update to 1.1.10.
[source]: Remove upstreamed patch.
Remove msgpack and broken references to it.
[arguments]: Add ‘use-system-msgpack’ phase.
* gnu/packages/patches/borg-fix-hard-link-preloading.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-06-04 22:19:33 +02:00
Leo Famulari a85d3fb07f
gnu: Mutt: Update to 1.12.0. 
* gnu/packages/mail.scm (mutt): Update to 1.12.0.
 2019-06-04 13:40:00 -04:00
Leo Famulari bac78669c7
gnu: MPD: Update to 0.21.9. 
* gnu/packages/mpd.scm (mpd): Update to 0.21.9.
 2019-06-04 13:37:25 -04:00
Leo Famulari 6140764990
gnu: Syncthing: Update to 1.1.4. 
* gnu/packages/syncthing.scm (syncthing): Update to 1.1.4.
 2019-06-04 13:28:59 -04:00
Leo Famulari 70f3a38471
gnu: go-github-com-oschwald-geoip2-golang: Update to 1.3.0. 
* gnu/packages/syncthing.scm (go-github-com-oschwald-geoip2-golang):
Update to 1.3.0.
 2019-06-04 13:28:58 -04:00
Leo Famulari a92e9cca03
gnu: go-github-com-lib-pq: Update to 1.1.1. 
* gnu/packages/syncthing.scm (go-github-com-lib-pq): Update to 1.1.1.
 2019-06-04 13:28:58 -04:00
Leo Famulari 36bb1d5a9f
gnu: go-github-com-mattn-go-isatty: Update to 0.0.7. 
* gnu/packages/golang.scm (go-github-com-mattn-go-isatty): Update to 0.0.7.
[propagated-inputs]: Add go-golang-org-x-sys-unix.
 2019-06-04 13:28:55 -04:00
Kei Kebreau eeccd2e575
gnu: wxmaxima: Update to 19.05.7. 
* gnu/packages/maths.scm (wxmaxima): Update to 19.05.7.
 2019-06-04 10:44:14 -04:00
Kei Kebreau ccc963d528
gnu: maxima: Update to 5.43.0. 
* gnu/packages/maths.scm (maxima): Update to 5.43.0.
[arguments]: Adjust "patch-paths" and "post-install" phases.
 2019-06-04 09:30:38 -04:00
Marius Bakke f83e10e427
gnu: python-beautifulsoup4: Propagate python-soupsieve. 
This is a follow-up to commit abb53e6f87.

* gnu/packages/python-xyz.scm (python-beautifulsoup4)[native-inputs]: Change
to ...
[propagated-inputs]: ... this.
 2019-06-04 14:44:51 +02:00
Robert Vollmert a4f4e227bd
gnu: ghc-conduit-extra: Update to 1.3.1.1. 
* gnu/packages/haskell.scm (ghc-conduit-extra): Update to 1.3.1.1.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-06-04 15:38:41 +05:30
Mark H Weaver 05947d92b6
gnu: icecat: Update to 60.7.0-guix2. 
This includes updates to bundled extensions from the upstream
GNU IceCat 60.7.0-gnu1 release.

* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.7.0-guix2.
(icecat-source)[upstream-icecat-base-version]: Update to 60.7.0.
[upstream-icecat-source, gnuzilla-source]: Update hashes.
[origin]: Remove the substitutions that dealt with debian-specific package
code in the makeicecat script, since that code has been removed upstream.
(icecat)[arguments]: Adapt the 'install-desktop-entry' phase to avoid using
the Debian desktop file, which is no longer included in the IceCat sources.
* gnu/packages/patches/icecat-makeicecat.patch: Adapt to upstream changes.
 2019-06-04 04:21:52 -04:00
Kei Kebreau 92b1b6f6af
gnu: emacspeak: Update to 50.0. 
* gnu/packages/emacs.scm (emacspeak): Update to 50.0.
[arguments]: Simplify "configure" phase and adjust "install" phase.
 2019-06-03 23:09:33 -04:00
Ludovic Courtès ee2691fa33
services: guix-publish: Allow for multi-compression. 
This is a followup to b8fa86adfc.

* guix/deprecation.scm (warn-about-deprecation): Make public.
* gnu/services/base.scm (<guix-publish-configuration>)[compression]: New
field.
[compression-level]: Default to #f.  Add '%' to getter name.
(guix-publish-configuration-compression-level): Define as deprecated.
(default-compression): New procedure.
(guix-publish-shepherd-service)[config->compression-options]: New
procedure.
Use 'match-record' instead of 'match'.
* doc/guix.texi (Base Services): Remove 'compression-level' and document
'compression'.
 2019-06-03 23:18:47 +02:00
Florian Pelz 1acd107c6b
gnu: gnome-control-center: Set correct file name for the 'passwd' binary. 
* gnu/packages/gnome.scm (gnome-control-center): Substitute correct path to
  passwd.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-03 23:18:46 +02:00
Florian Pelz 27faad22a8
gnu: cracklib: Install password dictionary. 
* gnu/packages/password-utils.scm (cracklib): Use `make dict`.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-03 23:18:46 +02:00
Marius Bakke 18919cf928
gnu: python-translate-toolkit: Update home page. 
* gnu/packages/python-xyz.scm (python-translate-toolkit)[home-page]: Use HTTPS.
 2019-06-03 22:28:49 +02:00
Marius Bakke abb53e6f87
gnu: python-beautifulsoup4: Update to 4.7.1. 
* gnu/packages/python-xyz.scm (python-beautifulsoup4): Update to 4.7.1.
[native-inputs]: Add PYTHON-SOUPSIEVE.
 2019-06-03 22:28:49 +02:00
Marius Bakke d00b83fb8a
gnu: python-soupsieve: Fix python2 variant. 
* gnu/packages/python-xyz.scm (python-soupsieve)[properties]: New field.
(python2-soupsieve): Inherit using STRIP-PYTHON2-VARIANT.
[propagated-inputs]: Inherit from BASE.
 2019-06-03 22:28:49 +02:00
Marius Bakke f319409be0
gnu: Cython: Update home page. 
* gnu/packages/python-xyz.scm (python-cython)[home-page]: Use HTTPS.
 2019-06-03 22:28:49 +02:00
Marius Bakke cc1f240e11
gnu: Django: Update to 1.11.21 [fixes CVE-2019-12308, CVE-2019-11358]. 
* gnu/packages/django.scm (python-django): Update to 1.11.21.
 2019-06-03 22:28:49 +02:00
Marius Bakke 558c733044
gnu: OpenSSL@1.1: Update to 1.1.1c. 
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1c.
 2019-06-03 22:28:49 +02:00
Marius Bakke ee82f80df3
gnu: gphoto2: Update to 2.5.23. 
* gnu/packages/photo.scm (gphoto2): Update to 2.5.23.
 2019-06-03 22:28:49 +02:00
Marius Bakke c84366916f
gnu: libgphoto2: Update to 2.5.23. 
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.23.
 2019-06-03 22:28:48 +02:00
Marius Bakke 2f92678c70
gnu: re2: Update to 2019-06-01. 
* gnu/packages/regex.scm (re2): Update to 2019-06-01.
 2019-06-03 22:28:48 +02:00
Marius Bakke 106deba71e
gnu: xorg-server: Update to 1.20.5. 
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.5.
(xorg-server-for-tests): Stay on 1.20.4.
 2019-06-03 22:28:48 +02:00
Marius Bakke 618c7d6682
gnu: python-cryptography: Update to 2.7. 
* gnu/packages/python-crypto.scm (python-cryptography-vectors,
python-cryptography): Update to 2.7.
 2019-06-03 22:28:48 +02:00
Marius Bakke 0abafc468c
gnu: GnuPG: Update to 2.2.16. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.16.
 2019-06-03 22:28:48 +02:00
Marius Bakke 3c75c66cf3
gnu: libsodium: Update to 1.0.18. 
* gnu/packages/crypto.scm (libsodium): Update to 1.0.18.
 2019-06-03 22:28:48 +02:00
Marius Bakke d3e3a6adcd
gnu: Remove libevent@2.0. 
* gnu/packages/patches/libevent-2.0-CVE-2016-10195.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10196.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10197.patch,
gnu/packages/patches/libevent-2.0-evbuffer-add-use-last-with-datap.patch,
gnu/packages/patches/libevent-dns-tests.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libevent.scm (libevevent-2.0): Remove variable.
 2019-06-03 22:28:48 +02:00
Marius Bakke 1f889a5902
gnu: libevent: Update home page. 
* gnu/packages/libevent.scm (libevent)[home-page]: Use HTTPS.
 2019-06-03 22:28:48 +02:00
Danny Milosavljevic aa901521e4
linux-boot: Fix e2fsck warning. 
* gnu/build/linux-boot.scm (boot-system): Fix e2fsck warning.
 2019-06-03 18:08:56 +02:00
Ludovic Courtès 3092f1b835
gnu: guix: Update to 4a54ed7. 
* gnu/packages/package-management.scm (guix): Update to 4a54ed7.
 2019-06-02 23:30:40 +02:00
Leo Famulari 78d1497dcc
gnu: WireGuard: Update to 0.0.20190601. 
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190601.
 2019-06-02 16:33:39 -04:00
Mathieu Lirzin 4a54ed7749
gnu: emacs-google-translate: Update to 0.11.17. 
* gnu/packages/emacs-xyz.scm (emacs-google-translate): Update to 0.11.17.
[source]: Use 'git-fetch' method instead of 'url-fetch'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-02 22:19:19 +02:00
Ludovic Courtès dec4b3aa18
gnu: Add guile-srfi-159. 
* gnu/packages/guile-xyz.scm (guile-srfi-159): New variable.
 2019-06-02 22:01:57 +02:00
Jan Nieuwenhuizen bdf2dd797e
gnu: Add guile-gi. 
* gnu/packages/guile-xyz.scm (guile-gi): New variable.
 2019-06-02 20:18:13 +02:00
Rutger Helling 08f48b7864
gnu: faudio: Update to 19.06. 
* gnu/packages/audio.scm (faudio): Update to 19.06.
 2019-06-02 11:37:26 +02:00
Vagrant Cascadian 54d1430246
gnu: debootstrap: Update to 114. 
* gnu/packages/debian (debootstrap): Update to 114.
 2019-06-01 18:35:36 -07:00
Vagrant Cascadian 76513c949b
gnu: debian-archive-keyring: Update to 2019.01. 
* gnu/packages/debian (debian-archive-keyring): Update to 2019.01.
 2019-06-01 17:38:48 -07:00
Nicolas Goaziou fd4d3939c4
gnu: giac: Update to 1.5.0-57. 
* gnu/packages/algebra.scm (giac): Update to 1.5.0-57.
 2019-06-02 02:21:15 +02:00
Nicolas Goaziou 1a2fa342f0
gnu: musescore: Update to 3.1. 
* gnu/packages/music.scm (musescore): Update to 3.1.
 2019-06-02 02:02:41 +02:00
Ludovic Courtès bb64b2e7c0
herd: Use the Guile 2.2 'setvbuf' API. 
* gnu/services/herd.scm (open-connection): Use 'block for 'setvbuf'.
 2019-06-02 01:38:36 +02:00
Andy Tai 08be02bea1
gnu: Add terminator. 
* gnu/packages/gnome.scm (terminator): Add at 1.91

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-02 01:38:36 +02:00
Robert Vollmert 3eb261e2e5
gnu: ghc-happy: Skip memory-hungry tests. 
Tests fail reliably for me on a system with 2GB of available RAM, in
`issue93.a.hs` and `issue93.n.hs`.

* gnu/packages/haskell.scm (ghc-happy): Skip test "issue93".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-02 01:38:36 +02:00
Nicolas Goaziou 8b3560501f
gnu: keepassxc: Update to 2.4.2. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.4.2.
 2019-06-02 01:31:52 +02:00
Nicolas Goaziou 36f5e67ab4
gnu: grammalecte: Update to 1.1.1. 
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.1.1.
 2019-06-02 01:23:40 +02:00
Ricardo Wurmus 7d6efd2b6c
gnu: r-openssl: Update to 1.4. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.
 2019-06-01 23:04:26 +02:00
Ricardo Wurmus f53b4a6b77
gnu: r-biocviews: Update to 1.52.2. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.2.
[propagated-inputs]: Add r-biocmanager.
 2019-06-01 23:04:26 +02:00
Timothy Sample 2ccc9d692a
gnu: Add gash. 
* gnu/packages/shells.scm (gash): New variable.
 2019-06-01 14:47:56 -04:00
Guillaume LE VAILLANT a0c3a2e3a1
gnu: Add txr. 
* gnu/packages/lisp.scm (txr): New variable.
* gnu/packages/patches/txr-shell.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-06-01 15:26:30 +02:00
Mark H Weaver b6cf7e54ea
gnu: linux-libre: Update to 5.1.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.6.
(%linux-libre-hash): Update hash.
 2019-06-01 01:43:11 -04:00
Mark H Weaver bc5d9ae7c9
gnu: linux-libre@4.19: Update to 4.19.47. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.47.
(%linux-libre-4.19-hash): Update hash.
 2019-06-01 01:40:52 -04:00
Mark H Weaver 83c0672877
gnu: linux-libre@4.14: Update to 4.14.123. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.123.
(%linux-libre-4.14-hash): Update hash.
 2019-06-01 01:39:06 -04:00
Mark H Weaver 9d96994c62
gnu: linux-libre@4.9: Update to 4.9.180. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.180.
 2019-06-01 01:37:28 -04:00
Vasile Dumitrascu 86d73d59c9
gnu: gnucash-docs: Update to 3.5. 
* gnu/packages/gnucash.scm (gnucash-docs): Update to 3.5.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2019-05-31 23:06:10 -04:00
Vasile Dumitrascu d4cb92e707
gnu: gnucash: Update to 3.5. 
* gnu/packages/gnucash.scm (gnucash): Update to 3.5.
[source]: Remove unneeded patch.
* gnu/packages/patches/gnucash-fix-test-transaction-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2019-05-31 23:06:10 -04:00
Eric Bavier 4d44bcad56
gnu: dealii-openmpi: Add hdf5-parallel-openmpi input. 
* gnu/packages/maths.scm (dealii-openmpi)[inputs]: Add hdf5-parallel-openmpi.
 2019-05-31 19:41:41 -05:00
Eric Bavier a13e0f3db4
gnu: slepc: Update to 3.11.1. 
* gnu/packages/maths.scm (slepc): Update to 3.11.1.
[native-inputs]: Add petsc:examples.
[arguments]: Add PETSCCONFIGDIR to #:make-flags.
 2019-05-31 19:41:41 -05:00
Eric Bavier 4f7a4a06c2
gnu: petsc: Update to 3.11.2. 
* gnu/packages/maths.scm (petsc): Update to 3.11.2.
 2019-05-31 19:41:41 -05:00
Eric Bavier e586c6faf3
gnu: petsc-complex-mpi: Setup MPI for tests. 
* gnu/packages/maths.scm (petsc-complex-mpi)[arguments]: Add 'mpi-setup
phase.
 2019-05-31 19:41:41 -05:00
Kei Kebreau 5c48519204
gnu: Add mousepad. 
* gnu/packages/xfce.scm (mousepad): New variable.
 2019-05-31 18:54:20 -04:00
Guillaume LE VAILLANT 7293e3dba1
gnu: Add zbar. 
* gnu/packages/aidc.scm (zbar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 23:21:02 +02:00
Christopher Baines 2177d9222f
services: Add patchwork. 
* gnu/service/web.scm (<patchwork-database-configuration>
<patchwork-settings-module>, <patchwork-configuration>): New record types.
(patchwork-virtualhost): New procedure.
(patchwork-service-type): New variable.
* gnu/tests/web.scm (%test-patchwork): New variable.
* doc/guix.text (Web Services): Document it.
 2019-05-31 20:22:23 +01:00
Christopher Baines 4764c6cc46
gnu: Add patchwork. 
* gnu/packages/patchutils.scm (patchwork): New variable.
 2019-05-31 20:22:23 +01:00
Christopher Baines f6b0e1f8ff
services: Add getmail. 
Getmail is a mail retriever written in Python, this commit adds a service-type
to run getmail. I'm looking at this, as it's a convinient way of getting
mailing list messages in to Patchwork.

I initially tried putting this in the (gnu services mail) module, but due to
also trying to use the define-configuration pattern, it conflicted with the
dovecot service.

* gnu/services/getmail.scm: New file.
* gnu/local.mk: Add it.
* gnu/tests/mail.scm (%getmail-os, %test-getmail): New variables.
(run-getmail-test): New procedure.
 2019-05-31 20:22:20 +01:00
Leo Famulari 9bc1de3134
gnu: Go 1.4: Fix typo. 
* gnu/packages/golang.scm (go-1.4): Fix typo in comment.
 2019-05-31 10:30:21 -04:00
Julien Lepiller db6dd04c3d
gnu: gtksourceview-2: Fix finding default data. 
* gnu/packages/patches/gtksourceview-2-add-default-directory.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtksourceview-2)[source]: Use it.
 2019-05-31 14:41:38 +02:00
Julien Lepiller 27489e7f73
gnu: php: Update to 7.3.6. 
* gnu/packages/php.scm (php): Update to 7.3.6.
 2019-05-31 14:41:32 +02:00
Ricardo Wurmus 1a24f855c8
gnu: Add r-birta. 
* gnu/packages/bioconductor.scm (r-birta): New variable.
 2019-05-31 14:40:29 +02:00
Ricardo Wurmus 81e3de01ae
gnu: Add r-birewire. 
* gnu/packages/bioconductor.scm (r-birewire): New variable.
 2019-05-31 14:40:20 +02:00
Ricardo Wurmus 95bf71c307
gnu: r-seriation: Update to 1.2-5. 
* gnu/packages/cran.scm (r-seriation): Update to 1.2-5.
 2019-05-31 14:29:32 +02:00
Brian Leung 2e62ba46e2
gnu: emacs-diff-hl: Update to 1.8.6. 
* gnu/packages/emacs-xyz.scm (emacs-diff-hl): Update to 1.8.6.
[source]: Fetch from git.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:21:06 +02:00
Brian Leung 66712cc0ed
gnu: emacs-helm: Update to 3.2. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:20:20 +02:00
Brian Leung f42399b5e5
gnu: emacs-counsel-tramp: Update to 0.6.3. 
* gnu/packages/emacs-xyz.scm (emacs-counsel-tramp): Update to 0.6.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:19:53 +02:00
Brian Leung ea82e3b266
gnu: emacs-editorconfig: Update to 0.8.0. 
* gnu/packages/emacs-xyz.scm (emacs-editorconfig): Update to 0.8.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:19:18 +02:00
Brian Leung 265ee14650
gnu: emacs-exec-path-from-shell: Update to 1.12. 
* gnu/packages/emacs-xyz.scm (emacs-exec-path-from-shell): Update to 1.12.
[source]: Use git-fetch.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:18:29 +02:00
LaFreniere, Joseph 8ae48674ce
gnu: Add emacs-reformatter. 
* gnu/packages/emacs-xyz.scm (emacs-reformatter): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 10:15:52 +02:00
Joseph LaFreniere b0eaead510
gnu: Add emacs-ivy-pass. 
* gnu/packages/emacs-xyz.scm (emacs-ivy-pass): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-31 09:56:17 +02:00
Rutger Helling e637744547
gnu: kitty: Update to 0.14.1. 
* gnu/packages/terminals.scm (kitty): Update to 0.14.1.
 2019-05-31 08:33:19 +02:00
Vagrant Cascadian ff793da669
gnu: diffoscope: Update to version 115-1.7f3416f. 
* gnu/packages/package-management (diffoscope):
  [package] Update to version 115-1.7f3416f.
  [source] Switch to using git-fetch.
  [inputs] Move python-pytest and python-chardet ...
  [native-inputs] ... to here.
  [arguments] Move comment to fit line length.
 2019-05-30 16:04:30 -07:00
Ricardo Wurmus add5ecfd68
gnu: r-biocviews: Update to 1.52.1. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.1.
 2019-05-30 13:41:10 +02:00
Ricardo Wurmus 782a7f4655
gnu: r-tibble: Update to 2.1.2. 
* gnu/packages/statistics.scm (r-tibble): Update to 2.1.2.
 2019-05-30 13:41:04 +02:00
Ricardo Wurmus d1ee1540d4
gnu: r-dose: Update to 3.10.1. 
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.1.
 2019-05-30 13:40:48 +02:00
Andy Tai 169d63f533
gnu: Add gthumb. 
* gnu/packages/gnome.scm (gthumb): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2019-05-30 11:50:05 +02:00
Reza Alizadeh Majd dc37301330
gnu: sddm: Add QtQuick-related dependencies to sddm. 
* gnu/packages/display-managers.scm (sddm): add QtQuick related
dependencies to sddm package in order to `sddm-greeter` application
to load user defined themes which are based on QtQuick.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-29 23:16:49 +02:00
Ricardo Wurmus 4c8603e808
gnu: r-statmod: Update to 1.4.32. 
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.32.
 2019-05-29 22:38:05 +02:00
Ricardo Wurmus 765d327c85
gnu: r-fields: Update to 9.8-3. 
* gnu/packages/cran.scm (r-fields): Update to 9.8-3.
 2019-05-29 22:38:05 +02:00
Ricardo Wurmus a1ac29f80d
gnu: r-bayestestr: Update to 0.2.0. 
* gnu/packages/cran.scm (r-bayestestr): Update to 0.2.0.
 2019-05-29 22:38:05 +02:00
Carl Dong a15cee50ce
gnu: Use make-linux-libre-headers. 
* gnu/packages/linux.scm (make-linux-libre-headers): New variable.
(linux-libre): Rename to...
(linux-libre-5.1): ...this.
(linux-libre-headers): Rename to...
(linux-libre-headers-4.14.67): ...this.
(linux-libre-5.1, linux-libre-headers-4.14.67): Use make-linux-libre-headers.
(linux-libre-5.1, linux-libre-headers-5.1, linux-libre-headers-4.19,
%linux-libre-4.15-version, %linux-libre-4.15-hash, linux-libre-4.15,
linux-libre-headers-4.15, linux-libre-headers-4.14): New variables.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-29 18:19:16 +02:00
Carl Dong 2ea77d48a7
gnu: cross-base: Allow non-default linux-headers. 
* gnu/packages/cross-base.scm (cross-kernel-headers): Add
LINUX-HEADERS optional argument.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-29 15:44:54 +02:00
Carl Dong 7180dd6716
gnu: Add basic support for riscv64-linux-gnu targets. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
"riscv64-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "riscv"
prefix.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-29 15:40:31 +02:00
Nicolas Goaziou 4f963be052
gnu: Add childsplay. 
* gnu/packages/education.scm (childsplay): New variable.
 2019-05-29 13:09:53 +02:00
Mathieu Othacehe 694cb8dc62
installer: Fix wifi menu crash with hidden SSIDs. 
This fixes https://issues.guix.gnu.org/issue/35622.

* gnu/installer/connman.scm (<service>): Mention that name may be false.
* gnu/installer/newt/wifi.scm (wifi-services): Filter out wifi services
without name.

Co-authored by: Pierre Neidhardt <mail@ambrevar.xyz>
 2019-05-29 11:44:49 +02:00
Ricardo Wurmus 4b92dac20f
gnu: awscli: Add missing input. 
Fixes <https://bugs.gnu.org/35980>.

* gnu/packages/python-web.scm (awscli)[arguments]: Add build phase
"fix-reference-to-groff".
[inputs]: Add groff.
 2019-05-29 10:56:28 +02:00
Ricardo Wurmus d37ba98409
gnu: r-scran: Update to 1.12.1. 
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.1.
 2019-05-29 00:02:42 +02:00
Ricardo Wurmus 55cd48508e
gnu: r-scater: Update to 1.12.2. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.2.
 2019-05-29 00:02:37 +02:00
Ricardo Wurmus 102cf9a1ca
gnu: r-sva: Update to 3.32.1. 
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.1.
 2019-05-29 00:02:31 +02:00
Ricardo Wurmus 24f46e6e9e
gnu: r-genomicfeatures: Update to 1.36.1. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.1.
 2019-05-29 00:02:25 +02:00
Ricardo Wurmus 4eea449aaa
gnu: r-edger: Update to 3.26.4. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.4.
 2019-05-29 00:02:17 +02:00
Ricardo Wurmus 4929a30f69
gnu: r-variantannotation: Update to 1.30.1. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.1.
 2019-05-29 00:02:10 +02:00
Ricardo Wurmus e4519ee73d
gnu: r-atacseqqc: Update to 1.8.1. 
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.1.
 2019-05-28 23:56:36 +02:00
Ricardo Wurmus 13b49976b7
gnu: r-icobra: Update to 1.12.1. 
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.1.
 2019-05-28 23:56:31 +02:00
Ricardo Wurmus 85d0bd5340
gnu: r-chippeakanno: Update to 3.18.1. 
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.1.
 2019-05-28 23:56:27 +02:00
Ricardo Wurmus f43ec9e96a
gnu: r-geosphere: Update to 1.5-10. 
* gnu/packages/cran.scm (r-geosphere): Update to 1.5-10.
 2019-05-28 23:56:15 +02:00
Ricardo Wurmus 0fe52daa59
gnu: r-ggfortify: Update to 0.4.7. 
* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.7.
 2019-05-28 23:56:08 +02:00
Ricardo Wurmus 7a8577717f
gnu: r-wgcna: Update to 1.68. 
* gnu/packages/cran.scm (r-wgcna): Update to 1.68.
 2019-05-28 23:56:04 +02:00
Ricardo Wurmus 650e8defa0
gnu: r-bookdown: Update to 0.11. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.11.
[propagated-inputs]: Add ghc-pandoc; remove r-yaml.
 2019-05-28 23:55:44 +02:00
Ricardo Wurmus 20656a0202
gnu: r-upsetr: Update to 1.4.0. 
* gnu/packages/cran.scm (r-upsetr): Update to 1.4.0.
 2019-05-28 23:55:38 +02:00
Ricardo Wurmus 41059f63df
gnu: r-epi: Update to 2.37. 
* gnu/packages/cran.scm (r-epi): Update to 2.37.
 2019-05-28 23:55:33 +02:00
Ricardo Wurmus 9a749cad19
gnu: r-etm: Update to 1.0.5. 
* gnu/packages/cran.scm (r-etm): Update to 1.0.5.
 2019-05-28 23:55:27 +02:00
Ricardo Wurmus 10dbc3fc54
gnu: r-cmprsk: Update to 2.2-8. 
* gnu/packages/cran.scm (r-cmprsk): Update to 2.2-8.
 2019-05-28 23:55:21 +02:00
Ricardo Wurmus fa10f0d330
gnu: r-ks: Update to 1.11.5. 
* gnu/packages/cran.scm (r-ks): Update to 1.11.5.
 2019-05-28 23:55:14 +02:00
Ricardo Wurmus 1d7bde781f
gnu: r-bayesplot: Update to 1.7.0. 
* gnu/packages/cran.scm (r-bayesplot): Update to 1.7.0.
[propagated-inputs]: Add r-glue, r-tibble, and r-tidyselect.
 2019-05-28 23:54:53 +02:00
Ricardo Wurmus 27abdb11ae
gnu: r-refgenome: Update to 1.7.7. 
* gnu/packages/cran.scm (r-refgenome): Update to 1.7.7.
 2019-05-28 23:54:46 +02:00
Ricardo Wurmus 794c9e7d96
gnu: r-snakecase: Update to 0.11.0. 
* gnu/packages/cran.scm (r-snakecase): Update to 0.11.0.
 2019-05-28 23:54:40 +02:00
Ricardo Wurmus 9dd351233b
gnu: r-openxlsx: Update to 4.1.0.1. 
* gnu/packages/cran.scm (r-openxlsx): Update to 4.1.0.1.
 2019-05-28 23:54:36 +02:00
Ricardo Wurmus d328379d62
gnu: r-pillar: Update to 1.4.1. 
* gnu/packages/cran.scm (r-pillar): Update to 1.4.1.
 2019-05-28 23:54:32 +02:00
Ricardo Wurmus 130314d8fa
gnu: r-tsp: Update to 1.1-7. 
* gnu/packages/cran.scm (r-tsp): Update to 1.1-7.
 2019-05-28 23:54:26 +02:00
Ricardo Wurmus 6d3cfb88ea
gnu: r-jomo: Update to 2.6-8. 
* gnu/packages/cran.scm (r-jomo): Update to 2.6-8.
 2019-05-28 23:54:18 +02:00
Ricardo Wurmus beb82eb9d0
gnu: r-ksamples: Update to 1.2-9. 
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-9.
 2019-05-28 23:54:12 +02:00
Ricardo Wurmus 6edf0fb3db
gnu: r-lpsolve: Update to 5.6.13.1. 
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.1.
 2019-05-28 23:54:07 +02:00
Ricardo Wurmus 14532452b8
gnu: r-car: Update to 3.0-3. 
* gnu/packages/statistics.scm (r-car): Update to 3.0-3.
 2019-05-28 23:54:00 +02:00
Ricardo Wurmus 341643c6e1
gnu: r-fpc: Update to 2.2-1. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.2-1.
[propagated-inputs]: Remove r-trimcluster.
 2019-05-28 23:53:43 +02:00
Ricardo Wurmus f95690ceae
gnu: r-prabclus: Update to 2.2-7.1. 
* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.1.
 2019-05-28 23:53:33 +02:00
Ricardo Wurmus 1498b5a2a4
gnu: r-zoo: Update to 1.8-6. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-6.
 2019-05-28 23:53:28 +02:00
Ricardo Wurmus 3fca3fa1bc
gnu: r-rmarkdown: Update to 1.13. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.13.
[propagated-inputs]: Add r-xfun.
 2019-05-28 23:53:15 +02:00