cc2b77dfc7
gnu: Move content of openssl module into tls module.
...
* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to...
* gnu/packages/tls.scm: ...here.
* gnu/packages/openssl.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file.
* gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm,
cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm,
gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm,
networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm,
python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm,
synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm,
w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
2015-07-05 18:27:24 +02:00
7362371da5
gnu: python-mccabe: Fix license field.
...
* gnu/packages/python.scm (python-mccabe)[license]: 'expat' ->
'license:expat'.
2015-06-29 15:34:35 -05:00
e8df8f476e
gnu: Add python-flake8.
...
* gnu/packages/python.scm (python-flake8, python2-flake8): New variables.
2015-06-30 00:07:56 +02:00
a59e017cb1
gnu: Add python-mccabe.
...
* gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables.
2015-06-30 00:07:56 +02:00
e31d7f4420
gnu: Add python-pyflakes.
...
* gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables.
2015-06-30 00:07:55 +02:00
d889e6c4d9
gnu: Add python-pep8.
...
* gnu/packages/python.scm (python-pep8, python2-pep8): New variables.
2015-06-30 00:07:55 +02:00
3a1bfe186d
gnu: Add python2-fastlmm.
...
* gnu/packages/python.scm (python2-fastlmm): New variable.
2015-06-26 15:29:01 +02:00
0dde623211
gnu: Add python2-pysnptools.
...
* gnu/packages/python.scm (python2-pysnptools): New variable.
2015-06-26 15:29:01 +02:00
19afbea136
gnu: Replace versioned gfortran inputs with just "gfortran".
...
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
"gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
(superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
(octave)[native-inputs]: Likewise.
(gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
"gfortran".
2015-06-25 18:28:54 +02:00
be0a4c261e
gnu: python-scikit-learn: Update to 0.16.1.
...
* gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
2015-06-15 10:36:42 +02:00
2f6b3d2e7e
gnu: python-scikit-learn: Use OpenBLAS instead of ATLAS.
...
* gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with
"openblas".
* gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase
'set-environment-variables, which is only needed when ATLAS is used.
2015-06-15 10:36:42 +02:00
719b01c157
gnu: python-scipy: Build with OpenBLAS and lapack.
...
* gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack"
and "openblas".
* gnu/packages/python.scm (python-scipy)[arguments]: Replace phase
"set-environment-variables" with "configure-openblas".
2015-06-15 10:36:42 +02:00
cba256f8fa
gnu: python-numpy-bootstrap: Add lapack to inputs.
...
* gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to
inputs, because OpenBLAS does not include lapack functions.
2015-06-15 10:36:41 +02:00
4c50e5ab3a
gnu: python: Disable ssl test that fails with openssl-1.0.2b.
...
* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
2015-06-13 23:01:07 -04:00
dbdfe51598
gnu: python-numpy: Build against OpenBLAS.
...
* gnu/packages/python.scm (python-numpy)[inputs]: Use "openblas" instead of
"atlas".
* gnu/packages/python.scm (python-numpy)[arguments]: Configure build against
OpenBLAS.
Modified-By: Mark H Weaver <mhw@netris.org>
2015-06-07 17:30:40 -04:00
5ff408d998
python-pillow: Update to 2.8.1, remove duplicated ones.
...
* gnu/packages/python.scm (python-pillow): Update to 2.8.1.
[inputs]: Add freetype and libwebp.
(python-pillow, python2-pillow): Remove duplicated variables.
2015-05-29 21:01:42 +08:00
2e88d113aa
gnu: dbus-glib: Propagate inputs dbus and glib.
...
* gnu/packages/glib.scm (dbus-glib): Propagate inputs dbus and glib.
* gnu/packages/audio.scm (patchage),
gnu/packages/gnuzilla.scm (icecat),
gnu/packages/python.scm (python-dbus): Drop inputs dbus and glib.
* gnu/packages/gnome.scm (colord, gconf, gnome-vfs, upower),
gnu/packages/mail.scm (claws-mail),
gnu/packages/messaging.scm (hexchat),
gnu/packages/wicd.scm (wicd): Drop input dbus.
2015-05-23 17:12:00 +02:00
748cef5be9
gnu: Add python-rq.
...
* gnu/packages/python.scm (python-rq, python2-rq): New variables.
2015-05-22 15:23:23 +02:00
5394a6a653
gnu: Add python-redis.
...
* gnu/packages/python.scm (python-redis, python2-redis): New variables.
2015-05-22 15:23:23 +02:00
12c270ddd4
gnu: Add python-click.
...
* gnu/packages/python.scm (python-click, python2-click): New variables.
2015-05-22 15:23:23 +02:00
4520354282
gnu: Add python-pyzmq.
...
* gnu/packages/python.scm (python-pyzmq, python2-pyzmq): New variables.
2015-05-22 11:03:00 +02:00
35de1fbd90
gnu: Add python-seaborn.
...
* gnu/packages/python.scm (python-seaborn, python2-seaborn): New variables.
2015-05-15 16:33:45 +02:00
d072efcb6d
gnu: Add python-pandas.
...
* gnu/packages/python.scm (python-pandas, python2-pandas): New variables.
2015-05-15 16:33:45 +02:00
12f8f9bb3e
gnu: Add python-scikit-image.
...
* gnu/packages/python.scm (python-scikit-image, python2-scikit-image): New
variables.
2015-05-15 16:33:45 +02:00
a3f61425a6
gnu: scons: Update to 2.3.4.
...
* gnu/packages/python.scm (scons): Update to 2.3.4.
2015-05-07 05:06:26 -04:00
90fc547fa0
gnu: Add python-sympy.
...
* gnu/packages/python.scm (python-sympy, python2-sympy): New variables.
2015-05-04 15:21:47 +02:00
310d218f64
gnu: Add python-tornado.
...
* gnu/packages/python.scm (python-tornado, python2-tornado): New variables.
2015-04-28 17:01:01 +02:00
ed377cc6cf
gnu: Add python2-backport-ssl-match-hostname.
...
* gnu/packages/python.scm (python2-backport-ssl-match-hostname): New variable.
2015-04-28 17:01:01 +02:00
feaae48499
gnu: Add python-waf.
...
* gnu/packages/python.scm (python-waf, python2-waf): New variables.
2015-04-22 09:53:24 +08:00
0e05d01e4f
gnu: python: Use 'version-major+minor' to compute PYTHONPATH.
...
Fixes a regression introduced in 08c0450
2015-04-14 15:11:51 +08:00
08c045091e
python: Update to 3.4.3
...
* gnu/packages/python.scm (python): Update from 3.3.5 to 3.4.3.
* gnu/packages/patches/python-fix-tests.patch: Update the required test fixes.
* gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove it...
* gnu-system.am (dist_patch_DATA): ... and do not reference it here.
2015-04-10 00:19:46 +02:00
2c0499ad87
gnu: Add python-drmaa.
...
* gnu/packages/python.scm (python-drmaa, python2-drmaa): New variables.
2015-04-07 10:51:21 +02:00
0234ca06ce
gnu: Add python-singledispatch.
...
* gnu/packages/python.scm (python-singledispatch, python2-singledispatch): New
variables.
2015-04-05 12:42:36 -04:00
ae64112828
gnu: python-requests: Fix Python 2 version and add support for Python 3.
...
* gnu/packages/python.scm (python-requests): New variable.
(python2-requests): Generate based on Python 3 variant.
2015-04-05 12:38:48 -04:00
32f77c0445
gnu: Add python-networkx.
...
* gnu/packages/python.scm (python-networkx, python2-networkx): New variables.
2015-03-31 20:00:21 +02:00
3cff95cbee
gnu: Add python-decorator.
...
* gnu/packages/python.scm (python-decorator, python2-decorator): New
variables.
2015-03-31 20:00:00 +02:00
1f43445745
gnu: python: Do not use patchelf.
...
* gnu/packages/python.scm (python-2): Add rpath for lib directory of output to
LDFLAGS. Remove 'patchelf' from inputs. Remove #:modules and
#:imported-modules from arguments. Remove 'add-lib-to-runpath' phase.
(python): Do not add #:modules to inherited package arguments.
2015-03-24 19:30:33 -04:00
ef5cbf9bae
gnu: Add python-h5py and python2-h5py.
...
* gnu/packages/python.scm (python-h5py, python2-h5py): New variables.
2015-03-23 10:56:13 +01:00
db62afa55a
gnu: Add python2-xlib.
...
* gnu/packages/python.scm (python2-xlib): New variable.
2015-03-17 13:49:18 +01:00
166191b377
gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'.
...
* gnu/packages/avr.scm, gnu/packages/compression.scm,
gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm, gnu/packages/firmware.scm,
gnu/packages/flex.scm, gnu/packages/fontutils.scm,
gnu/packages/gd.scm, gnu/packages/ghostscript.scm,
gnu/packages/gnunet.scm, gnu/packages/graphics.scm,
gnu/packages/hugs.scm, gnu/packages/image.scm,
gnu/packages/linux.scm, gnu/packages/mail.scm,
gnu/packages/maths.scm, gnu/packages/mit-krb5.scm,
gnu/packages/python.scm, gnu/packages/rdf.scm,
gnu/packages/ssh.scm, gnu/packages/tcl.scm,
gnu/packages/xdisorg.scm, gnu/packages/xiph.scm,
gnu/packages/yasm.scm, gnu/packages/zip.scm: Use 'non-copyleft'
instead of 'bsd-style'.
2015-03-14 19:27:14 +01:00
1cb9c00614
gnu: python-testlib: Fix license field.
...
Fixes a problem introduced in a1920bc9f2
2015-03-07 13:58:50 -05:00
a1920bc9f2
gnu: Add python-testlib and python2-testlib.
...
* gnu/packages/python.scm (python-testlib, python2-testlib): New variables.
2015-03-07 15:08:36 +01:00
516277cb14
gnu: python2-pil: Adapt to newer Freetype.
...
* gnu/packages/python.scm (python2-pil): Add snippet.
2015-03-07 00:56:43 +01:00
ce0614ddb0
gnu: Move 'which' to (gnu packages base).
...
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
gnu/packages/compression.scm, gnu/packages/datamash.scm,
gnu/packages/games.scm, gnu/packages/glib.scm,
gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
gnu/packages/gps.scm, gnu/packages/guile.scm,
gnu/packages/java.scm, gnu/packages/libevent.scm,
gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/node.scm, gnu/packages/ntp.scm,
gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
gnu/packages/scheme.scm, gnu/packages/ssh.scm,
gnu/packages/statistics.scm, gnu/packages/texlive.scm,
gnu/packages/wdiff.scm: Adjust accordingly.
2015-03-04 17:23:27 +01:00
1289062522
Merge branch 'core-updates'.
2015-03-04 14:07:23 +01:00
92cb152b37
gnu: Add snakemake.
...
* gnu/packages/python.scm (snakemake): New variable.
2015-03-03 10:22:23 +01:00
240ca4aae7
gnu: Add Scikit-learn.
...
* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): New
variables.
2015-03-02 14:09:10 +01:00
8d12be1eb1
gnu: Add pyyaml.
...
* gnu/packages/python.scm (python-pyyaml, python2-pyyaml): New variables.
2015-03-02 11:31:14 +01:00
3820d39739
Merge branch 'master' into core-updates
...
Conflicts:
gnu/packages/gnupg.scm
2015-03-01 19:05:29 -05:00
f586c87705
gnu: Add 'file-name' fields for github source tarballs without a name.
...
* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb),
gnu/packages/audio.scm (jack-2, lvtk),
gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie),
gnu/packages/game-development.scm (tiled),
gnu/packages/games.scm (minetest-data, minetest, retroarch),
gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson),
gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask),
gnu/packages/mail.scm (offlineimap, libetpan),
gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja),
gnu/packages/nutrition.scm (gourmet),
gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf),
gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add
'file-name' field to origin.
2015-02-28 09:49:01 -05:00
Andreas Enge