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40927 Commits

Author SHA1 Message Date
Ricardo Wurmus 4dc2ecc279
gnu: r-qvalue: Move to (gnu packages bioconductor). 
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
* gnu/packages/bioconductor.scm (r-qvalue): ...to here.
 2019-03-12 22:47:56 +01:00
Ricardo Wurmus 557a1089c6
gnu: Add r-hsmmsinglecell. 
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
 2019-03-12 22:47:56 +01:00
Ricardo Wurmus 12d73f9c3c
gnu: Add guile-persist. 
* gnu/packages/guile-xyz.scm (guile-persist): New variable.
 2019-03-12 22:47:56 +01:00
Oleg Pykhalov e80a809f1f
gnu: Add tmux-xpanes. 
* gnu/packages/tmux.scm (tmux-xpanes): New variable.
 2019-03-12 22:41:31 +03:00
Brian Leung 94a33ab899
gnu: Add emacs-eshell-bookmark. 
* gnu/packages/emacs-xyz.scm (emacs-eshell-bookmark): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
 2019-03-12 21:56:09 +03:00
Julien Lepiller 61ce2e77ff
nls: Update 'de' translation of the manual. 2019-03-12 18:57:00 +01:00
Julien Lepiller 2ffec22eeb
gnu: python-pygit2: Update to 0.27.4. 
* gnu/packages/python-xyz.scm (python-pygit2): Update to 0.27.4.
(python-pygit2)[arguments]: Disable tests.
 2019-03-12 18:56:34 +01:00
Efraim Flashner 7458ceaca8
gnu: inxi-minimal: Declare source-file-name. 
* gnu/packages/admin.scm (inxi-minimal)[source]: Add missing field.
 2019-03-12 17:29:19 +02:00
Tobias Geerinckx-Rice 49fb2d0922
gnu: inxi-minimal: Update to 3.0.22-1. 
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.22-1.
 2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 17ab1e43a6
gnu: perl-anyevent: Update to 7.15. 
* gnu/packages/libevent.scm (perl-anyevent): Update to 7.15.
 2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 2f805e97f2
gnu: aide: Update to 0.16.1. 
* gnu/packages/admin.scm (aide): Update to 0.16.1.
 2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice 737300be4b
gnu: aide: Move project home. 
* gnu/packages/admin.scm (aide)[source, home-page]: Update.
 2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice 8dbd8e426c
gnu: aspell-dict-it: Update to 2.4-20070901-0. 
* gnu/packages/aspell.scm (aspell-dict-it): Update to 2.4-20070901-0.
 2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice b4ed7c3e8d
gnu: libinput: Don't use NAME in source URI. 
* gnu/packages/freedesktop.scm (libinput)[source]: Hard-code NAME.
 2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice e3df159edc
gnu: geos: Update to 3.7.1. 
* gnu/packages/geo.scm (geos): Update to 3.7.1.
 2019-03-12 15:26:19 +01:00
Pierre Neidhardt 75dabac633
gnu: Add emacs-lisp-extra-font-lock. 
* gnu/packages/emacs-xyz.scm (emacs-lisp-extra-font-lock): New variable.
 2019-03-12 09:28:01 +01:00
Pierre Neidhardt b6180f93bd
gnu: emacs-suggest: Update to 0.7. 
* gnu/packages/emacs-xyz.scm (emacs-suggest): Update to 0.7.
 2019-03-12 09:24:31 +01:00
Pierre Neidhardt a922b2aee2
gnu: emacs-helm: Update to 3.1. 
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.1.
 2019-03-12 08:06:50 +01:00
Tobias Geerinckx-Rice 2ee05bb9d4
gnu: freedink-engine: Update to 109.6. 
* gnu/packages/games.scm (freedink-engine): Update to 109.6.
 2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice 98704a8133
gnu: libmanette: Update to 0.2.2. 
* gnu/packages/games.scm (libmanette): Update to 0.2.2.
 2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice a554462123
gnu: kicad-symbols: Use GIT-FILE-NAME. 
* packages/engineering.scm (kicad-symbols)[source]: Use GIT-FILE-NAME.
 2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 65bab0120b
gnu: kicad-symbols: Update to 5.0.2. 
* gnu/packages/engineering.scm (kicad-symbols): Update to 5.0.2.
 2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice b13b7143d7
gnu: kicad: Don't use NAME in source URI. 
* gnu/packages/engineering.scm (kicad)[source]: Hard-code NAME.
 2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 23df8f3578
gnu: kicad: Update to 5.0.2. 
* gnu/packages/engineering.scm (kicad): Update to 5.0.2.
 2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice 3d21f1ea0f
gnu: gtkwave: Update to 3.3.99. 
* gnu/packages/fpga.scm (gtkwave): Update to 3.3.99.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 5cfe650b9d
gnu: python-sqlalchemy: Use HTTPS home page. 
* gnu/packages/databases.scm (python-sqlalchemy)[home-page]: Use HTTPS.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 6d04f694dc
gnu: python-sqlalchemy: Update to 1.3.1. 
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.1.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 96ec46047b
gnu: gcompris-qt: Update to 0.96. 
* gnu/packages/education.scm (gcompris-qt): Update to 0.96.
[inputs]: Add openssl.
 2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice 909404b571
gnu: python-sql: Update to 1.0.0. 
* gnu/packages/databases.scm (python-sql): Update to 1.0.0.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 99e690a59a
gnu: python-pyodbc: Update to 4.0.25. 
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.25.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 72b7de49b4
gnu: python-psycopg2: Update to 2.7.7. 
* gnu/packages/databases.scm (python-psycopg2): Update to 2.7.7.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice d49bdbca5c
gnu: perl-dbd-sqlite: Update to 1.62. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.62.
 2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice 49596a5413
gnu: perl-dbd-mysql: Update to 4.050. 
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.050.
 2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 2f813be342
gnu: perl-sql-abstract: Update to 1.86. 
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.86.
 2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 55f4282e0c
gnu: guile-colorized: Move project home. 
* gnu/packages/guile-xyz.scm (guile-colorized)[source, home-page]: Update.
 2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice 1340ce2899
gnu: guile-colorized: Don't use unstable tarball. 
* gnu/packages/guile-xyz.scm (guile-colorized)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-03-12 02:22:33 +01:00
Brian Leung 1bc24bbf00
gnu: Add emacs-debpaste. 
* gnu/packages/emacs-xyz.scm (emacs-debpaste): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-03-11 23:12:26 +01:00
Brian Leung 6f93b525d3
gnu: Add emacs-xml-rpc. 
* gnu/packages/emacs-xyz.scm (emacs-xml-rpc): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2019-03-11 23:12:26 +01:00
Ludovic Courtès bfc9c33930
packages: Add the channel .go files to the search path. 
Until now %LOAD-COMPILED-PATH would wrongfully contain:

  CHANNEL/share/guile/site/X.Y

for each channel, thereby ignoring all the .go files of channels.  This
fixes it so that %LOAD-COMPILED-PATH instead contains:

  CHANNEL/lib/guile/X.Y/site-ccache

* guix/describe.scm (current-channel-entries): New procedure.
(package-path-entries): Change to return the %LOAD-COMPILED-PATH entries
as a second value.
* gnu/packages.scm (%package-module-path): Expect two values from
'package-path-entries' and augment %LOAD-COMPILED-PATH accordingly.
 2019-03-11 23:12:26 +01:00
Ludovic Courtès 082c648d28
services: mate-desktop: Deprecate the 'mate-desktop-service' procedure. 
* gnu/services/desktop.scm (mate-desktop-service): Deprecate.
* doc/guix.texi (Desktop Services): Document 'mate-desktop-service-type'
and 'mate-desktop-configuration'.  Fix spelling of "Enlightenment".
 2019-03-11 23:12:26 +01:00
Ludovic Courtès 984a61624c
services: mate-desktop: Add default value. 
* gnu/services/desktop.scm (mate-desktop-service-type)[default-value]:
New field.
 2019-03-11 23:12:26 +01:00
Rutger Helling 7959ccac3f
gnu: swaylock: Fix indentation. 
* gnu/packages/wm.scm (swaylock): Fix indentation.
 2019-03-11 20:31:30 +01:00
Rutger Helling b0805973cd
gnu: Add swaylock. 
* gnu/packages/wm.scm (swaylock): New variable.
 2019-03-11 20:28:41 +01:00
Rutger Helling 06ae5efcf3
gnu: Add swayidle. 
* gnu/packages/wm.scm (swayidle): New variable.
 2019-03-11 20:28:41 +01:00
Rutger Helling 2ff844f090
gnu: Add sway. 
* gnu/packages/wm.scm (sway): New variable.
 2019-03-11 20:28:41 +01:00
Rutger Helling eea969cf8d
gnu: Add wlroots. 
* gnu/packages/wm.scm (wlroots): New variable.
 2019-03-11 20:28:41 +01:00
Pierre Neidhardt 684626763f
gnu: emacs-magit: Fix perl path in dedicated variable. 
* gnu/packages/emacs-xyz.scm (emacs-magit)[arguments]: Do it.
 2019-03-11 19:01:49 +01:00
Pierre Neidhardt 842e66c573
gnu: Add emacs-lorem-ipsum. 
* gnu/packages/emacs-xyz.scm (emacs-lorem-ipsum): New variable.
 2019-03-11 18:46:25 +01:00
Oleg Pykhalov 34e3d028b9
gnu: emacs-json-reformat: Fix test. 
This patch deletes a test which tries to compare JSON objects order.

* gnu/packages/emacs-xyz.scm (emacs-json-reformat): Delete
'json-reformat-test:json-reformat-region' test.
 2019-03-11 19:52:39 +03:00
Ricardo Wurmus 4948c23677
gnu: r-with-tests: Update to 3.5.3. 
* gnu/packages/statistics.scm (r-with-tests): Update to 3.5.3.
 2019-03-11 15:25:27 +01:00