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36328 Commits

Author SHA1 Message Date
Jan Nieuwenhuizen 562c37c7be
bootstrap: Update %bootstrap-mes. 
Built with

    b00a95be28
    bootstrap: Add %bootstrap-mescc-tools.

* gnu/packages/bootstrap.scm (%bootstrap-mes): Update.
 2018-11-18 16:44:13 +01:00
Jan Nieuwenhuizen b00a95be28
bootstrap: Add %bootstrap-mescc-tools. 
Built with
    a647da364a
    bootstrap: Add %mes-minimal.

* gnu/packages/bootstrap.scm (%bootstrap-mescc-tools): New variable.
 2018-11-18 16:43:21 +01:00
Jan Nieuwenhuizen a647da364a
bootstrap: Add %mes-minimal. 
%mes-minimal introduces a Mes for bootstrap that does not depend on graphviz,
perl, and texinfo and thus does not build any documentation.  This removes
~100 dependencies from bootstrap-tarballs.

* gnu/packages/make-bootstrap.scm (%mes-minimal): New variable.
(%mes-minmal-stripped): Rename from %mes-stripped.
(%mes-bootstrap-tarball): Update.
 2018-11-18 16:38:11 +01:00
Björn Höfling 02d83c2479
gnu: libgcrypt: Update to 1.8.4. 
Update libgcrypt and remove reproducibility patch, it is now built-in.
See https://dev.gnupg.org/T4102

* gnu/packages/gnupg.scm (libgcrypt): Update to 1.8.4.
[source]: Remove patch.
* gnu/packages/patches/libgcrypt-make-yat2m-reproducible.patch: Delete file.
* gnu/local.mk(dist_patch_DATA): Remove it.
 2018-11-18 11:17:50 +01:00
Jan Nieuwenhuizen fae3c0d953
bootstrap: Add mescc-tools-static, mescc-tools-static-tarball. 
* gnu/packages/make-bootstrap.scm (%mescc-tools-static,
%mescc-tools-bootstrap-tarball): New variable.
 2018-11-18 08:08:17 +01:00
Eric Bavier 5b01b6034a
python: Honor '--cores=...' in tests. 
* gnu/packages/python.scm (python-2.7)[arguments]: Add #:make-flags.
 2018-11-17 00:43:30 -06:00
Mathieu Othacehe 421ec86532
gnu: glibc: Update supported locale patch description. 
gnu/packages/patches/glibc-supported-locales.patch: Update description.
 2018-11-07 18:57:08 +09:00
Mathieu Othacehe 1b9fb043d9
gnu: glibc: Export supported locales. 
Debian and Archlinux (at least) force the installation of the
localedata/SUPPORTED file of the glibc. This file lists all the supported
locales of the glibc.

* gnu/packages/patches/glibc-supported-locales.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc/linux): Add the previous patch,
(glibc-2.28): ditto.
 2018-11-07 18:47:07 +09:00
Jan Nieuwenhuizen a036e3c9ba
doc: Fix typo. 
* doc/guix.texi (Reduced Binary Seed Bootstrap): Fix typo.
 2018-10-23 23:19:06 +02:00
Jan Nieuwenhuizen d0bb7ed61e
doc: Update Preparing to Use the Bootstrap Binaries. 
* doc/guix.texi (Preparing to Use the Bootstrap Binaries): Mention
bootstrap-mes alongside bootstrap-gcc.
(Reducing the Set of Bootstrap Binaries): Mention the Reduced Binary Seed
bootstrap, MesCC-Tools and Mes.
 2018-10-23 20:54:43 +02:00
Jan Nieuwenhuizen 1a99a9c45c
bootstrap: Build with %bootstrap-mes. 
* gnu/packages/bootstrap.scm (%tinycc-seed): Remove.
(%bootstrap-inputs): Use %bootstrap-mes instead of %mes-seed and %tinycc-seed.
* gnu/packages/commencement.scm (mescc-tools-boot, mes-boot, tcc-boot0): Build
with %bootstrap-mes instead of %mes-seed and %tinycc-seed.
 2018-10-23 20:54:42 +02:00
Jan Nieuwenhuizen 7cbf6f1ca2
gnu: mescc-tools: Update to 0.5.2-0.bb062b0d. 
* gnu/packages/mes.scm (mescc-tools): Update to 0.5.2-0.bb062b0d.
mescc
* gnu/packages/commencement.scm (mescc-tools-boot): Stay at 0.5.2
 2018-10-23 20:54:42 +02:00
Jan Nieuwenhuizen 5f02c9b7d6
bootstrap: Add %bootstrap-mes. 
Built with
    668ffe1e4e bootstrap: Move use-modules to top of builder.

Todo: host these on ftp.gnu.org/pub/guix/...

* gnu/packages/bootstrap.scm (%bootstrap-mes): New variable.
 2018-10-23 20:54:42 +02:00
Jan Nieuwenhuizen 668ffe1e4e
bootstrap: Move use-modules to top of builder. 
* gnu/packages/bootstrap.scm (package-from-tarball): Move use-modules to top of builder.
(%bootstrap-glibc): Likewise.
(%bootstrap-gcc): Likewise.
 2018-10-21 23:41:14 +02:00
Jan Nieuwenhuizen 35dcf85157
bootstrap: Add %mes-stripped, %mes-bootstrap-tarball. 
* gnu/packages/make-bootstrap.scm (%mes-stripped): New variable.
(%mes-bootstrap-tarball): New variable.
* gnu/packages/mes.scm: Oops, remove stray (gnu packages commencement) module
include.
 2018-10-21 23:26:21 +02:00
Jan Nieuwenhuizen f266199dc1
gnu: mes: Update to 0.18.0-08f04f55. 
This update is a preparation for the %bootstrap-mes package; due to some small
problems it fails to build with plain mes-0.18.  mes-boot0 stays at 0.18 only
to avoid another rebuild world.

%bootstrap-mes brings the building and packaging the Mes bootstrap seeds from
manual operation into Guix.  We will bump mes and mes-boot0 to a future 0.18.1
or 0.19 and regenerate %bootstrap-mes in a nex iteration.

    08f04f55 build: Oops, remove stray lib/linux/x86_64-mes/crt1.
    33f37f27 build: x86_64 bootstrap build fixes and workaround.
    4ae2a111 doc: Release update.
    5277669b mescc: Oops, delete wrong line of assembly.
    44cc97a8 admin: Release update.

* gnu/packages/mes.scm (mes): Update to 0.18.0-08f04f55.
* gnu/packages/commencement.scm (mes-boot0): Stay at 0.18.0.
 2018-10-21 23:26:21 +02:00
Jan Nieuwenhuizen e065823a59
doc: Move `Reduced Binary Seed Bootstrap' into `Bootstrapping'. 
* doc/guix.texi (Reduced Binary Seed Bootstrap):
 2018-10-21 23:26:21 +02:00
Jan Nieuwenhuizen cf7658f7cb
Merge branch 'core-updates' into core-updates-next 2018-10-21 23:19:35 +02:00
Marius Bakke ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Marius Bakke e381ae317c
gnu: python2-bz2file: Inherit arguments from python-bzfile. 
* gnu/packages/python.scm (python-bz2file)[properties]: Remove field.
(python2-bz2file): Use PACKAGE-WITH-PYTHON2.
 2018-10-21 18:03:06 +02:00
Marius Bakke ecc604baf0
gnu: klick: Use scons-python2 for building. 
* gnu/packages/music.scm (klick)[arguments]: Add #:scons.
 2018-10-21 18:03:06 +02:00
Marius Bakke 3a69b59332
gnu: rng-tools: Update to 6.6. 
* gnu/packages/linux.scm (rng-tools): Update to 6.6.
 2018-10-21 17:57:01 +02:00
Marius Bakke 9b6dc31b6d
gnu: fluidsynth: Update to 2.0.1. 
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.1.
(fluidsynth-1): New public variable.
* gnu/packages/games.scm (gzdoom)[inputs]: Change FLUIDSYNTH to FLUIDSYNTH-1.
* gnu/packages/music.scm (lmms)[inputs]: Likewise.
 2018-10-21 17:57:01 +02:00
Marius Bakke b6b3e5120a
gnu: libgxps: Update to 0.3.0. 
* gnu/packages/gnome.scm (libgxps): Update to 0.3.0.
[source](patches): Remove.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[inputs]: Change LIBJPEG to LIBJPEG-TURBO.
* gnu/packages/patches/libgxps-CVE-2017-11590.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2018-10-21 17:57:01 +02:00
Marius Bakke c8d62d936e
gnu: libgxps: Propagate required inputs. 
* gnu/packages/gnome.scm (libgxps)[inputs]: Move CAIRO, GLIB and LIBARCHIVE ...
[propagated-inputs]: ... here.  New field.
 2018-10-21 17:57:01 +02:00
Marius Bakke 920de4286a
gnu: re2: Update to 2018-10-01. 
* gnu/packages/regex.scm (re2): Update to 2018-10-01.
 2018-10-21 17:57:01 +02:00
Marius Bakke ab5e4be647
gnu: libgphoto2: Update to 2.5.19. 
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.19.
 2018-10-21 17:57:01 +02:00
Marius Bakke 8941b4ab3d
gnu: appstream-glib: Update to 0.7.14. 
* gnu/packages/glib.scm (appstream-glib): Update to 0.7.14.
 2018-10-21 17:57:00 +02:00
Marius Bakke 8eadc55202
gnu: openal: Update to 1.19.1. 
* gnu/packages/audio.scm (openal): Update to 1.19.1.
 2018-10-21 17:57:00 +02:00
Efraim Flashner 2c17bd7b29
gnu: kodi: Disable version checker. 
Fixes bug#32997.

* gnu/packages/kodi.scm (kodi)[arguments]: Add substitution to remove
the version checking configuration option.
 2018-10-21 16:39:26 +03:00
Ben Woodcroft 617c478506
gnu: python2-dendropy: Disable failing test. 
* gnu/packages/bioinformatics.scm (python2-dendropy)[arguments]: Disable
failing test.
 2018-10-21 22:31:56 +10:00
Ricardo Wurmus 21c837405a
gnu: bowtie: Update to 2.3.4.3. 
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.3.4.3.
[source]: Fetch from git.
[inputs]: Replace python-2 with python-wrapper; move perl, perl-clone,
perl-test-deep, and perl-test-simple from here...
[native-inputs]: ...to here.
[arguments]: Simplify check phase.
 2018-10-20 23:37:34 +02:00
Ricardo Wurmus f45093429c
gnu: blast+: Use INVOKE and return #T unconditionally. 
* gnu/packages/bioinformatics.scm (blast+)[arguments]: Use INVOKE and
return #T unconditionally.
 2018-10-20 23:37:34 +02:00
Ricardo Wurmus f8b697a385
gnu: bedops: Update to 2.4.35. 
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.35.
[source]: Fetch from git.
 2018-10-20 23:37:34 +02:00
Ricardo Wurmus 337d72fb44
gnu: bedops: Use INVOKE. 
* gnu/packages/bioinformatics.scm (bedops)[arguments]: Use INVOKE.
 2018-10-20 23:37:34 +02:00
Ricardo Wurmus c793f4d8fb
gnu: bamm: Fetch from git and use INVOKE. 
* gnu/packages/bioinformatics.scm (bamm)[source]: Fetch from git.
[arguments]: Use INVOKE and return #T unconditionally.
 2018-10-20 23:37:34 +02:00
Ricardo Wurmus 95758e2faf
gnu: aragorn: Use invoke and simplify. 
* gnu/packages/bioinformatics.scm (aragorn)[arguments]: Use INVOKE in build
phase; simplify install phase.
 2018-10-20 23:37:33 +02:00
Ricardo Wurmus 8b4102b903
gnu: clipper: Update to 1.2.1. 
* gnu/packages/bioinformatics.scm (clipper): Update to 1.2.1.
[source]: Fetch from git.
[arguments]: Add fix-typo phase.
 2018-10-20 23:37:33 +02:00
Ricardo Wurmus 895cf8278a
gnu: python-pybedtools: Update to 0.7.10. 
* gnu/packages/bioinformatics.scm (python2-pybedtools): Update to 0.7.10.
[arguments]: Disable broken tests.
[propagated-inputs]: Replace bedtools with bedtools-2.26; add
python-matplotlib, python-pysam, and python-pyyaml.
[native-inputs]: Remove python-pyyaml; add kentutils, python-numpy,
python-pandas, and python-six.
(python-pybedtools): New variable.
 2018-10-20 23:37:33 +02:00
Ricardo Wurmus 129363b762
gnu: Add bedtools-2.26. 
* gnu/packages/bioinformatics.scm (bedtools-2.26): New variable.
 2018-10-20 23:37:28 +02:00
Kei Kebreau bfa47f14b1
gnu: cataclysm-dda: Update snapshot. 
* gnu/packages/games.scm (cataclysm-dda): Update snapshot to 0b2c194e5.
 2018-10-20 14:38:45 -04:00
Kei Kebreau 82cbe4e046
gnu: maxima: Update to 5.42.0. 
* gnu/packages/maths.scm (maxima): Update to 5.42.0.
 2018-10-20 14:38:45 -04:00
Oleg Pykhalov 227da3a4c5
gnu: python-glances: Update to 3.0.2. 
* gnu/packages/python.scm (python-glances): Update to 3.0.2.
 2018-10-20 18:24:23 +03:00
Oleg Pykhalov 67fd64a490
gnu: emacs-hy-mode: Update to 1.0.3. 
* gnu/packages/emacs.scm (emacs-hy-mode): Update to 1.0.3.
 2018-10-20 17:48:58 +03:00
Oleg Pykhalov e661dca879
gnu: emacs-erc-hl-nicks: Update to 1.3.3. 
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): Update to 1.3.3.
 2018-10-20 17:48:49 +03:00
Oleg Pykhalov 91c5e6a69d
gnu: emacs-yasnippet: Update to 0.13.0. 
* gnu/packages/emacs.scm (emacs-yasnippet): Update to 0.13.0.
 2018-10-20 17:48:36 +03:00
Oleg Pykhalov 292d637b9e
gnu: emacs-nginx-mode: Update to 1.1.9. 
* gnu/packages/emacs.scm (emacs-nginx-mode): Update to 1.1.9.
 2018-10-20 17:48:28 +03:00
Oleg Pykhalov 2f1dacc281
gnu: emacs-rainbow-mode: Update to 1.0.1. 
* gnu/packages/emacs.scm (emacs-rainbow-mode): Update to 1.0.1.
 2018-10-20 17:48:07 +03:00
Oleg Pykhalov 45dcdf5349
gnu: emacs-smart-mode-line: Update to 2.12.0. 
* gnu/packages/emacs.scm (emacs-smart-mode-line): Update to 2.12.0.
 2018-10-20 17:47:46 +03:00
Oleg Pykhalov 9137596179
gnu: emacs-fill-column-indicator: Update to 1.89. 
* gnu/packages/emacs.scm (emacs-fill-column-indicator): Update to 1.89.
 2018-10-20 17:47:13 +03:00