Commit Graph

42268 Commits

Author SHA1 Message Date
Ludovic Courtès 1ccc0f807d
environment: '-C' creates namespaces where the user is not root.
* guix/scripts/environment.scm (launch-environment/container): Add UID
and GID.  Use them in PASSWD and GROUPS.  Pass them as #:guest-uid and
 #:guest-gid to 'call-with-container'.
* tests/guix-environment-container.sh: Test the inner UID.
In '--user' test, replace hard-coded 0 with 1000.
* doc/guix.texi (Invoking guix environment): Adjust accordingly.
2019-04-02 18:15:37 +02:00
Ludovic Courtès af76c020bf
linux-container: Make the guest UID and GID a parameter.
* gnu/build/linux-container.scm (initialize-user-namespace): Add
 #:guest-uid and #:guest-gid parameters and honor them.
(run-container): Likewise.
(call-with-container): Likewise.
* tests/containers.scm ("call-with-container, user namespace, guest UID/GID"):
New test.
2019-04-02 18:15:37 +02:00
Ludovic Courtès 36d69ac993
nls: Update 'de' translation of the manual. 2019-04-02 18:15:37 +02:00
Ricardo Wurmus cbe40b8b24
gnu: pigx-scrnaseq: Use older loompy.
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Replace
python-loompy with python-loompy-for-pigx-scrnaseq.
2019-04-02 16:11:23 +02:00
Ricardo Wurmus dc112a0fe2
gnu: Add python-loompy-for-pigx-scrnaseq.
* gnu/packages/bioinformatics.scm (python-loompy-for-pigx-scrnaseq): New variable.
2019-04-02 16:11:12 +02:00
Ricardo Wurmus 82cc117450
gnu: pigx-chipseq: Update to 0.0.40.
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.40.
2019-04-02 15:53:23 +02:00
Ricardo Wurmus b4a33870f6
gnu: python-scanpy: Add python-louvain to inputs.
* gnu/packages/bioinformatics.scm (python-scanpy)[propagated-inputs]: Sort
inputs and add python-louvain.
[arguments]: Do not delete test that depends on louvain.
2019-04-02 15:11:45 +02:00
Ricardo Wurmus 6ee48091a4
gnu: Add python-louvain.
* gnu/packages/graph.scm (python-louvain): New variable.
2019-04-02 15:11:45 +02:00
Rutger Helling ba907ae362
gnu: faudio: Update to 19.04.
* gnu/packages/audio.scm (faudio): Update to 19.04.
2019-04-02 11:30:05 +02:00
Clément Lassieur c97ad2fd8b
gnu: Add emacs-evil-numbers.
* gnu/packages/emacs-xyz.scm (emacs-evil-numbers): New variable.
2019-04-02 10:55:07 +02:00
Ludovic Courtès d6fda4d3d1
gnu: gnome-shell: Add dependency on libgnomekbd.
This fixes the "Show keyboard layout" button in the keyboard layout
switcher.

* gnu/packages/gnome.scm (gnome-shell)[arguments]: In
'record-absolute-file-names' phase, record file name of
'gkbd-keyboard-display'.
[inputs]: Add LIBGNOMEKBD.
2019-04-01 23:21:02 +02:00
Ludovic Courtès 2472cdec25
gnu: gnome-shell: Store absolute file name of 'ibus-daemon'.
* gnu/packages/gnome.scm (gnome-shell)[arguments]: Add
'record-absolute-file-names' phase.
2019-04-01 23:20:56 +02:00
Leo Famulari 0e55864036
gnu: go-github-com-burntsushi-toml: Update to 0.3.1.
* gnu/packages/golang.scm (go-github-com-burntsushi-toml): Update to 0.3.1.
2019-04-01 16:07:21 -04:00
Arun Isaac 413f61265e
gnu: Add mlucas.
* gnu/packages/maths.scm (mlucas): New variable.
2019-04-01 17:07:31 +05:30
Rutger Helling cce9e3792a
gnu: flatpak: Update to 1.2.4 [fixes CVE-2019-10063].
* gnu/packages/package-management.scm (flatpak): Update to 1.2.4 [fixes
CVE-2019-10063].
2019-04-01 10:05:58 +02:00
Rutger Helling 6bc30a571c
gnu: openmw: Update to 0.45.0.
* gnu/packages/game-development.scm (openmw): Update to 0.45.0.
2019-04-01 09:43:56 +02:00
Brian Leung f125c5a5ea
gnu: emacs-zones: silence byte-compiler.
* gnu/packages/patches/emacs-zones-called-interactively.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-31 23:32:47 +02:00
Pierre Langlois 7a352f76cf
gnu: gpodder: Build reproducibly.
* gnu/packages/gpodder.scm (gpodder)[arguments]: Add 'do-not-run-msgmerge'
phase before 'install'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-31 23:32:47 +02:00
Tim Gesthuizen bab7a49558
services: slim-configuration: Adapt exported getter methods.
Commit 554b860739 introduces changes to the
slim-configuration record without updating the exported methods.

* gnu/services/xorg.scm: Export slim-configuration-xorg and
  slim-configuration-sessreg.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-31 23:32:46 +02:00
Ludovic Courtès 631a6e6377
doc: Document 'gdm-service-type'.
* doc/guix.texi (X Window): Document 'gdm-service-type' and
'gdm-configuration'.  Take description of '.desktop' files from the
'slim-service-type' description.
* gnu/services/xorg.scm (gdm-service): Remove outdated comment.
2019-03-31 23:32:46 +02:00
Marius Bakke 105fa9fcf7
gnu: ungoogled-chromium: Update to 73.0.3683.86-0.4c7fb6d [security fixes].
The update to Chromium 73 includes more than 60 security fixes.  See the
release announcement for more information:
<https://chromereleases.googleblog.com/2019/03/stable-channel-update-for-desktop_12.html>.

* gnu/packages/chromium.scm (%preserved-third-party-files): Drop
"net/third_party/http2" and "net/third_party/spdy".  Add "v8/src/third_party/siphash".
(%chromium-version): Update to 73.0.3683.86.
(%ungoogled-revision): Update to 4c7fb6d1a86602999f30b58ef8b331b2115c5ad8.
(%debian-revision): New variable.
(ungoogled-chromium-source): Add an origin for Debians packaging scripts.
Adjust for Ungoogled refactoring and add a procedure for applying Debian
patches.  Replace unneeded LET* for LET and reindent.
(ungoogled-chromium)[arguments]: Remove one obsolete substitution, add two others.
2019-03-31 21:26:17 +02:00
Marius Bakke 799aebd71f
gnu: ungoogled-chromium: Enable VA-API on x86_64-linux only.
* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Conditionally add
"use_vaapi" to #:configure-flags.
2019-03-31 21:26:17 +02:00
Marius Bakke 3725865f84
gnu: SDDM: Update to 0.18.1.
* gnu/packages/display-managers.scm (sddm): Update to 0.18.1.
2019-03-31 21:26:17 +02:00
Marius Bakke a02d390357
gnu: mbedtls-apache: Update to 2.16.1.
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.16.1.
2019-03-31 21:26:16 +02:00
Marius Bakke ee74a07668
gnu: pcsc-lite: Update to 1.8.25.
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.25.
2019-03-31 21:26:16 +02:00
Marius Bakke 1e3c711923
gnu: python-markdown: Update to 3.1.
* gnu/packages/python-xyz.scm (python-markdown): Update to 3.1.
2019-03-31 21:26:16 +02:00
Marius Bakke fa542ee48a
gnu: ffmpeg@3.4: Update to 3.4.6.
* gnu/packages/video.scm (ffmpeg-3.4): Update to 3.4.6.
2019-03-31 21:26:16 +02:00
Marius Bakke 3b3fd90377
gnu: elogind: Update to 241.2.
* gnu/packages/freedesktop.scm (elogind): Update to 241.2.
2019-03-31 21:26:16 +02:00
Marius Bakke 4f0464c923
gnu: whois: Update to 5.4.2.
* gnu/packages/networking.scm (whois): Update to 5.4.2.
2019-03-31 21:26:16 +02:00
Marius Bakke 32deef23f6
gnu: libssh2: Update to 1.8.2.
* gnu/packages/ssh.scm (libssh2): Update to 1.8.2.
2019-03-31 21:26:16 +02:00
Marius Bakke 5089ebc3a3
gnu: GnuPG: Update to 2.2.15.
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.15.
2019-03-31 21:26:16 +02:00
Marius Bakke 5cc013f05d
gnu: leveldb: Update to 1.21.
* gnu/packages/databases.scm (leveldb): Update to 1.21.
[build-system]: Change to CMAKE-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
2019-03-31 21:26:15 +02:00
Marius Bakke ad7c77fd75
gnu: leveldb: Don't use unstable tarball.
* gnu/packages/databases.scm (leveldb)[source]: Use GIT-FETCH.
2019-03-31 21:26:15 +02:00
Marius Bakke e73ded3c71
services: Open vSwitch: Provide a default configuration.
* gnu/services/networking.scm (openvswitch-service-type): Provide
OPENVSWITCH-CONFIGURATION as a default value.
* gnu/tests/networking.scm (%openvswitch-os): Don't configure the service.
2019-03-31 21:26:15 +02:00
Ivan Petkov d7d3bdca89
gnu: rust: Update to 1.32.0.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.31): ...this.
(rust): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-31 21:11:55 +02:00
Brett Gilio ccbaeba38e
gnu: python-language-server: Update to 0.26.1.
* gnu/packages/python-xyz.scm (python-language-server): Update to 0.26.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-03-31 21:16:17 +03:00
Efraim Flashner 36a4366d79
gnu: Fix descriptions to not use quotes.
* gnu/packages/admin.scm (wpa-supplicant-minimal, mingetty, di),
* gnu/packages/audio.scm (fil-plugins),
* gnu/packages/base.scm (make-ld-wrapper, make-glibc-locales),
* gnu/packages/bioinformatics.scm (r-samtools),
* gnu/packages/chez.scm (chez-mit),
* gnu/packages/commencement.scm (make-gcc-toolchain),
* gnu/packages/compression.scm (fastjar),
* gnu/packages/cran.scm (r-maps, r-rcpp),
* gnu/packages/databases.scm (sparql-query),
* gnu/packages/dunst.scm (dunst),
* gnu/packages/ftp.scm (ncftp),
* gnu/packages/gl.scm (freeglut),
* gnu/packages/haskell-check.scm (ghc-tasty-golden),
* gnu/packages/haskell.scm (ghc-case-insensitive, ghc-text,
ghc-haskell-src, ghc-syb, ghc-deepseq-generics, ghc-network-uri,
ghc-rerebase, ghc-zlib),
* gnu/packages/image.scm (jbig2dec),
* gnu/packages/kde-frameworks.scm (kinit, karchive),
* gnu/packages/linux.scm (wireless-tools, perf, module-init-tools, kbd),
* gnu/packages/lirc.scm (lirc),
* gnu/packages/lisp.scm (uglify-js),
* gnu/packages/mate.scm (mate-netbook),
* gnu/packages/microcom.scm (microcom),
* gnu/packages/music.scm (bristol),
* gnu/packages/networking.scm (perl-geo-ip),
* gnu/packages/patchutils.scm (patches),
* gnu/packages/perl-check.scm (perl-test-more-utf8),
* gnu/packages/perl.scm (perl-log-report-optional, perl-file-which,
perl-io-tty, perl-log-any, perl-digest-sha1, perl-class-load,
perl-regexp-common, perl-module-pluggable, perl-class-modifier),
* gnu/packages/python-xyz.scm (python-backports-abc, python-natsort),
* gnu/packages/samba.scm (iniparser),
* gnu/packages/search.scm (mlocate),
* gnu/packages/spice.scm (spice),
* gnu/packages/statistics.scm (r-dt, r-lubridate, r-estimability,
r-commonmark, r-digest, r-viridislite, r-stringr),
* gnu/packages/tex.scm (texlive-latex-changebar),
* gnu/packages/version-control.scm (subversion),
* gnu/packages/w3m.scm (w3m),
* gnu/packages/web.scm (perl-http-parser,
perl-plack-middleware-reverseproxy),
* gnu/packages/xorg.scm (xkeyboard-config, mkfontdir, xcursor-theme,
mkfontscale, xinit, font-alias)[description]: Use @code instead of quotes.
2019-03-31 20:51:10 +03:00
Tobias Geerinckx-Rice cd9ca20a5d
gnu: znc: Update to 1.7.3.
* gnu/packages/messaging.scm (znc): Update to 1.7.3.
2019-03-31 16:05:18 +02:00
Nicolas Goaziou ad4f644226
gnu: Add flare.
* gnu/packages/games.scm (flare-engine, flare-game): New variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2019-03-31 10:35:31 +08:00
Leo Famulari 6d3e149f10
gnu: dovecot: Update to 2.3.5.1 [fixes CVE-2019-7524].
* gnu/packages/mail.scm (dovecot): Update to 2.3.5.1.
2019-03-30 15:57:13 -04:00
Leo Famulari 6e1f91d91c
gnu: khal: Update to 0.10.0.
* gnu/packages/calendar.scm (khal): Update to 0.10.0.
[native-inputs]: Replace tzdata with tzdata-for-tests.
[arguments]: Simplify the check phase.
2019-03-30 15:10:19 -04:00
Ludovic Courtès e23f2ff183
gnu: Rename "gnubackgammon" back to "gnubg".
This reverts c97e4d8bbe, which was not
consensual and broke 'tests/guix-package.sh'.

* gnu/packages/games.scm (gnubackgammon): Rename to...
(gnubg): ... this, and rename the 'gnubg' deprecated alias to
'gnubackgammon'.
2019-03-30 15:19:32 +01:00
Ludovic Courtès 154f1f0937
packages: Remove 'maintainers' field.
This field was never used and doesn't match the way we collectively
maintain packages.

* guix/packages.scm (<package>)[maintainers]: Remove.
2019-03-30 15:19:32 +01:00
Ludovic Courtès a7646bc5e1
packages: Remove 'self-native-input?' field.
This field has become unnecessary with the addition of 'this-package'.

* guix/packages.scm (<package>)[self-native-input?]: Remove.
(package->bag): Adjust accordingly.
* doc/guix.texi (package Reference): Remove 'self-native-input?'.
2019-03-30 15:19:32 +01:00
Ludovic Courtès 329c3c323e
gnu: guile: Remove version 2.0.13.
This package was unused since 0991fd5336.

* gnu/packages/guile.scm (guile-2.0.13): Remove.
2019-03-30 15:19:32 +01:00
Ludovic Courtès 528ea990c3
gnu: Use 'this-package' as a native input instead of 'self-native-input?'.
* gnu/packages/file.scm (file)[self-native-input?]: Remove.
[native-inputs]: New field.
* gnu/packages/guile.scm (guile-1.8)[self-native-input?]: Remove.
[native-inputs]: New field.
(guile-2.0)[self-native-input?]: Remove.
[native-inputs]: Add THIS-PACKAGE when (%current-target-system) is true.
* gnu/packages/ncurses.scm (ncurses)[self-native-input?]: Remove.
[native-inputs]: Add THIS-PACKAGE when (%current-target-system) is true.
* gnu/packages/python-xyz.scm (python-file)[self-native-input?]: Remove.
[native-inputs]: New field.
2019-03-30 15:19:32 +01:00
Timothy Sample 398747f8f1
gnu: gnome-shell: Remove gnome-control-center from inputs.
* gnu/packages/gnome.scm (gnome-shell)[inputs]: Remove
gnome-control-center.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-30 15:19:32 +01:00
Timothy Sample da43d1cb32
gnu: evolution-data-server: Add 'libedataserverui' output.
gnu/packages/gnome.scm (evolution-data-server)[outputs]: Add
'libedataserverui'.
[arguments]: Add phases so that only libedataserverui is linked with
WebKitGTK, and that it is moved to its own output.
(evolution, gnome-calendar, gnome-todo)[inputs]: Add libedataserverui.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-30 15:19:31 +01:00
Timothy Sample 14c297fde1
gnu: gnome-online-accounts: Split off 'lib' output.
gnu/packages/gnome.scm (gnome-online-accounts)[outputs]: Add 'lib'.
[arguments]: Set the 'libdir' path to the 'out' output, and add a phase
to ensure that libgoa gets installed in the 'lib' output.
(evolution-data-server, gfbgraph, gnome-calendar, gnome-control-center,
gnome-todo, libgdata, libzapojit): Use the 'lib' output of
gnome-online-accounts.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-30 15:19:31 +01:00
Brian Leung 29a9eb9e1a
gnu: Add emacs-counsel-projectile.
* gnu/packages/emacs-xyz.scm (emacs-counsel-projectile): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-03-30 17:03:57 +03:00