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36622 Commits

Author SHA1 Message Date
Ricardo Wurmus 8bfc6dc507
gnu: r-rvest: Update to 0.3.4. 
* gnu/packages/cran.scm (r-rvest): Update to 0.3.4.
 2019-05-20 12:00:34 +02:00
Ricardo Wurmus 524c71889b
gnu: r-vegan: Update to 2.5-5. 
* gnu/packages/cran.scm (r-vegan): Update to 2.5-5.
 2019-05-20 12:00:34 +02:00
Ricardo Wurmus 33ba81359c
gnu: r-pillar: Update to 1.4.0. 
* gnu/packages/cran.scm (r-pillar): Update to 1.4.0.
[propagated-inputs]: Add r-vctrs.
 2019-05-20 12:00:34 +02:00
Ricardo Wurmus 6004bc1a8f
gnu: Add r-vctrs. 
* gnu/packages/cran.scm (r-vctrs): New variable.
 2019-05-20 12:00:34 +02:00
Ricardo Wurmus c87a335860
gnu: Add r-zeallot. 
* gnu/packages/cran.scm (r-zeallot): New variable.
 2019-05-20 12:00:34 +02:00
Ricardo Wurmus 154c2b0bc5
gnu: r-tinytex: Update to 0.13. 
* gnu/packages/cran.scm (r-tinytex): Update to 0.13.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus 5da9918ded
gnu: r-heatmaply: Update to 0.16.0. 
* gnu/packages/cran.scm (r-heatmaply): Update to 0.16.0.
[propagated-inputs]: Remove r-gplots and r-knitr.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus 40b2f7bc0e
gnu: r-xcms: Update to 3.6.1. 
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.6.1.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus b9a7f9c065
gnu: r-sn: Update to 1.5-4. 
* gnu/packages/statistics.scm (r-sn): Update to 1.5-4.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus b02a960275
gnu: r-robustbase: Update to 0.93-5. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.93-5.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus 89428ef7fb
gnu: r-ggthemes: Update to 4.2.0. 
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.2.0.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus b1b9212d1a
gnu: r-hexbin: Update to 1.27.3. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.27.3.
 2019-05-20 12:00:33 +02:00
Ricardo Wurmus c5f6d1798c
gnu: r-segmented: Update to 0.5-4.0. 
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-4.0.
 2019-05-20 12:00:32 +02:00
Ricardo Wurmus 179a477cd7
gnu: r-rcpparmadillo: Update to 0.9.400.3.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.400.3.0.
 2019-05-20 12:00:32 +02:00
Ricardo Wurmus 7762b5825f
gnu: r-batchjobs: Update to 1.8. 
* gnu/packages/statistics.scm (r-batchjobs): Update to 1.8.
 2019-05-20 12:00:32 +02:00
Ricardo Wurmus 9a6da53fc7
gnu: r-dplyr: Update to 0.8.1. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.1.
 2019-05-20 12:00:32 +02:00
Ricardo Wurmus bf5320aaf5
gnu: r-nlme: Update to 3.1-140. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-140.
 2019-05-20 12:00:32 +02:00
Ricardo Wurmus ee7e2ebf61
gnu: r-svglite: Update to 1.2.2. 
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.2.
[native-inputs]: Move r-rcpp from here...
[propagated-inputs]: ...to here.
 2019-05-20 12:00:28 +02:00
Ludovic Courtès 99f47b53f7
Merge branch 'version-1.0.1' 2019-05-20 11:48:57 +02:00
Pierre Neidhardt 8d036f3ecf
gnu: youtube-dl: Update to 2019.05.11. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.05.11.
 2019-05-20 11:15:50 +02:00
Pierre Neidhardt 6e0c5fec83
gnu: emacs-evil-collection: Update to 20190519. 
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20190519.
 2019-05-20 11:14:33 +02:00
Tobias Geerinckx-Rice 0f469c172e
gnu: xf86-video-voodoo: Ship patch locally. 
The ORIGIN patch has been modified in place, probably *wild guessing
sounds* by a server-side cgit update.

* gnu/packages/xorg.scm (xf86-video-voodoo)[source]: Use SEARCH-PATCHES.
* gnu/packages/patches/xf86-video-voodoo-pcitag.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-05-20 05:02:26 +02:00
Tobias Geerinckx-Rice 3db907f000
gnu: emacs-idris-mode: Update source hash. 
The source tarball was modified in place.  Only file metadata —
specifically: time stamps — differ.

* gnu/packages/emacs-xyz.scm (emacs-idris-mode)[source]: Update sha256.
 2019-05-20 04:45:42 +02:00
Tobias Geerinckx-Rice ff281acce2
gnu: texlive-latex-acmart: Update to 1.60. 
Forced by source hash change.

* gnu/packages/tex.scm (texlive-latex-acmart): Update to 1.60.
 2019-05-20 04:45:42 +02:00
Tobias Geerinckx-Rice b8ae2e9e21
gnu: libu2f-host: Update to 1.1.10. 
* gnu/packages/security-token.scm (libu2f-host): Update to 1.1.10.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 813bb1a1da
gnu: s6: Update to 2.8.0.1. 
* gnu/packages/skarnet.scm (s6): Update to 2.8.0.1.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 8afab7ed31
gnu: skalibs: Update to 2.8.1.0. 
* gnu/packages/skarnet.scm (skalibs): Update to 2.8.1.0.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 873ef5b116
gnu: stunnel: Update to 5.54. 
* gnu/packages/web.scm (stunnel): Update to 5.54.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 5cb92d7ed5
gnu: tumbler: Don't use NAME in source URI. 
* gnu/packages/xfce.scm (tumbler)[source]: Hard-code NAME.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice e7532c2db8
gnu: tumbler: Update to 0.2.4. 
* gnu/packages/xfce.scm (tumbler): Update to 0.2.4.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 08f5f6e821
gnu: garcon: Don't use NAME in source URI. 
* gnu/packages/xfce.scm (garcon)[source]: Hard-code NAME.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 7275e56c06
gnu: thunar: Don't use NAME in source URI. 
* gnu/packages/xfce.scm (thunar)[source]: Hard-code NAME.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 1438306bd5
gnu: exo: Don't use NAME in source URI. 
* gnu/packages/xfce.scm (exo)[source]: Hard-code NAME.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 5da54e8004
gnu: thunar: Update to 1.8.6. 
* gnu/packages/xfce.scm (thunar): Update to 1.8.6.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 89d7bb866f
gnu: exo: Update to 0.12.5. 
* gnu/packages/xfce.scm (exo): Update to 0.12.5.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice dd5fbf613a
gnu: restic: Update to 0.9.5. 
* gnu/packages/backup.scm (restic): Update to 0.9.5.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice 558d36e6bf
gnu: wimlib: Update to 1.13.1. 
* gnu/packages/backup.scm (wimlib): Update to 1.13.1.
 2019-05-20 04:16:05 +02:00
Tobias Geerinckx-Rice b313665fa0
gnu: Add tpacpi-bat. 
* gnu/packages/linux.scm (tpacpi-bat): New public variable.
 2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice 7bf28446a5
gnu: Add acpi-call-linux-module. 
* gnu/packages/linux.scm (acpi-call-linux-module): New public variable.
 2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice e1f640db8f
gnu: Move Linux-Libre modules to their own section. 
* gnu/packages/linux.scm (vhba-module): Move to its own section.
 2019-05-20 01:49:34 +02:00
Tobias Geerinckx-Rice 9956812237
gnu: openconnect: Update to 8.03. 
* gnu/packages/vpn.scm (openconnect): Update to 8.03.
 2019-05-20 01:49:34 +02:00
Ludovic Courtès fb2abbd6f5
gnu: guix: Update to 8204295. 2019-05-19 16:01:47 +02:00
Nicolas Goaziou f5557bde1c
gnu: toutenclic: Update to 7.00. 
* gnu/packages/education.scm (toutenclic): Update to 7.00.
[arguments]: Rename executable from "toutenclic.py" to "toutenclic".
 2019-05-19 14:44:22 +02:00
Ludovic Courtès 820429517f
gnu: guix: Update to 1.0.1. 2019-05-19 12:25:54 +02:00
Danny Milosavljevic 1d86b05618
vm: Create installation media with MBR and HFS only, no GPT. 
* gnu/build/vm.scm (make-iso9660-image): Accept XORRISO,
GRUB-MKRESCUE-ENVIRONMENT.
* gnu/system/vm.scm (iso9660-image): Pass XORRISO; accept
GRUB-MKRESCUE-ENVIRONMENT.
(system-disk-image): Pass GRUB-MKRESCUE-ENVIRONMENT.
* gnu/packages/patches/xorriso-no-mbr-in-inner-efi.patch: New file.
* gnu/packages/patches/xorriso-no-partition-table-in-inner-efi.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/cdrom.scm (xorriso)[source]: Add patches.
[arguments]<#:phases>[install-frontends]:
Add phase.
 2019-05-18 18:35:37 +02:00
Leo Famulari 08eafef865
gnu: Borg: Fix a hang in the test suite. 
* gnu/packages/patches/borg-fix-hard-link-preloading.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (borg)[source]: Use it.
 2019-05-17 07:57:55 -04:00
Rutger Helling 7211073069
gnu: glslang: Update to 7.11.3214. 
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3214.
 2019-05-17 12:28:38 +02:00
Rutger Helling e3c5ff3e3d
gnu: wine: Update to 4.0.1. 
* gnu/packages/wine.scm (wine): Update to 4.0.1.
 2019-05-17 12:28:38 +02:00
Mark H Weaver d59c90a5bf
gnu: linux-libre: Update to 5.1.3. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.3.
(%linux-libre-hash): Update hash.
 2019-05-17 04:10:51 -04:00
Mark H Weaver e5cb98f5cd
gnu: linux-libre@4.19: Update to 4.19.44. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.44.
(%linux-libre-4.19-hash): Update hash.
 2019-05-17 04:09:50 -04:00
Mark H Weaver cce92e0470
gnu: linux-libre@4.14: Update to 4.14.120. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.120.
(%linux-libre-4.14-hash): Update hash.
 2019-05-17 04:09:01 -04:00
Mark H Weaver af94698b71
gnu: linux-libre@4.9: Update to 4.9.177. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.177.
 2019-05-17 04:07:34 -04:00
Mark H Weaver 4dabdbffac
gnu: linux-libre@4.4: Update to 4.4.180. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.180.
 2019-05-17 04:06:49 -04:00
Tobias Geerinckx-Rice f52e83470b
gnu: qd: Update source and home page. 
The tarball has been updated in place with only documentation changes.

* gnu/packages/multiprecision.scm (qd)[source]: Update URL and hash.
[home-page]: Update URL.
 2019-05-17 04:19:29 +02:00
Tobias Geerinckx-Rice 3dc8b46579
gnu: ripit: Use archived source and home page. 
* gnu/packages/cdrom.scm (ripit)[source, home-page]: Use archived URLs.
 2019-05-17 04:18:56 +02:00
Tobias Geerinckx-Rice 674495b7e0
gnu: proot: Don't use unstable tarball. 
* gnu/packages/linux.scm (proot)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice fc32bc450f
gnu: et: Add FILE-NAME. 
* gnu/packages/ssh.scm (et)[source]: Add FILE-NAME.
 2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice a36efdbc60
gnu: mlucas: Update source hash. 
The tarball was modified in-place with too many small changes to list
here, all of them apparently intended as minor bug fixes.

* gnu/packages/maths.scm (mlucas)[source]: Update sha256.
 2019-05-17 03:27:41 +02:00
Tobias Geerinckx-Rice 8731a4aaff
gnu: jq: Update sources. 
* gnu/packages/web.scm (jq)[source]: Update sha256.  Add snippet to
remove newly-bundled onigurama.
 2019-05-17 03:05:55 +02:00
Tobias Geerinckx-Rice 9c476e4db5
gnu: kicad-library: Update source URL. 
* gnu/packages/engineering.scm (kicad-library)[source]: Update URL.
Re-indent.
 2019-05-17 03:05:54 +02:00
Tobias Geerinckx-Rice 8df90c1b23
gnu: foo2zjs: Update source hash. 
The tarball was modified in place, adding one line to
foo2zjs/printer-profile.sh:

  ARGYLL_VER=1.6.3
 +ARGYLL_VER=2.1.1
  ARGYLL_ROOT=$HOME/src/Argyll_V${ARGYLL_VER}

* gnu/packages/cups.scm (foo2zjs)[source]: Update sha256.
 2019-05-17 03:05:54 +02:00
Tobias Geerinckx-Rice 782e171380
gnu: emacs-idris-mode: Update source hash. 
Only file modification times have changed.

* gnu/packages/emacs-xyz.scm (emacs-idris-mode)[source]: Update sha256.
 2019-05-17 03:05:54 +02:00
Mark H Weaver 2fb31fd6a2
gnu: icecat: Update to 60.6.3-guix1. 
* gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.6.3-guix1.
(icecat-source)[upstream-firefox-source]: Update hash.
 2019-05-16 20:35:31 -04:00
Tobias Geerinckx-Rice 1be06ddac1
gnu: et: Don't use unstable tarball. 
This follows up commit ae113b976b (what
looked like a build error was transient file system unrelatedness.)

* gnu/packages/ssh.scm (et)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-05-17 01:48:25 +02:00
Tobias Geerinckx-Rice ae113b976b
gnu: et: Update source hash. 
The contents of both archives are identical.

* gnu/packages/ssh.scm (et)[source]: Update sha256.
 2019-05-17 01:35:08 +02:00
Tobias Geerinckx-Rice 90c6a46ded
gnu: ephoto: Update source hash. 
The contents of both archives are identical.

* gnu/packages/enlightenment.scm (ephoto)[source]: Update sha256.
 2019-05-17 01:35:08 +02:00
Nicolas Goaziou 6f8c41958f
gnu: Add nauty. 
* gnu/packages/maths.scm (nauty): New variable.
 2019-05-16 23:19:08 +02:00
Ricardo Wurmus 481eca8002
gnu: guile-file-names: Update to 0.2. 
* gnu/packages/guile-xyz.scm (guile-file-names): Update to 0.2.
[arguments]: Adjust build phase "build-with-guile-2.2" and rename to
"fix-target-directory".
 2019-05-16 21:41:24 +02:00
Tobias Geerinckx-Rice c72c10053d
gnu: bind: Update to 9.14.2. 
* gnu/packages/dns.scm (isc-bind): Update to 9.14.2.
[source]: Remove patch.
[arguments]: Run only fuzz tests.
* gnu/packages/patches/bind-fix-unused-pk11-ecc-constants.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-05-16 18:21:50 +02:00
Ludovic Courtès 9da2dd90e2
gnu: js-mathjax: Avoid "Too many open files" error while building. 
* gnu/packages/javascript.scm (js-mathjax)[arguments]: Add call to
'close-pipe'.  Previously builds would sometimes fail with EMFILE (this
was non-deterministic as it depends on GC activity.)
 2019-05-16 17:06:18 +02:00
Ricardo Wurmus e865e0b959
gnu: Add python-leidenalg. 
* gnu/packages/graph.scm (python-leidenalg): New variable.
 2019-05-16 16:07:06 +02:00
Ricardo Wurmus fbeb92d760
gnu: custom-gcc: Unhide resulting package. 
This is a follow-up to commit d78010b81e.  While
the plain "gcc" packages should be hidden by default, gcc-derived packages
like "gfortran" should not.

* gnu/packages/gcc.scm (custom-gcc)[properties]: Remove the 'hidden? property.
 2019-05-16 13:45:23 +02:00
Ricardo Wurmus a4ff3255d4
gnu: star: Update to 2.7.1a. 
* gnu/packages/bioinformatics.scm (star): Update to 2.7.1a.
 2019-05-16 13:45:23 +02:00
Florian Pelz 3e9c80b27a
gnu: network-manager-applet: Patch libnma for modem support. 
* gnu/packages/gnome.scm (network-manager-applet): Patch libnma to load
iso-codes and mobile-broadband-provider-info from the store and not require
them in the profile.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-16 13:30:32 +02:00
Nicolas Goaziou 6e633a510c
gnu: grammalecte: Update to 1.1. 
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.1.
 2019-05-16 10:37:04 +02:00
Tobias Geerinckx-Rice d019c05a42
gnu: loksh: Update to 6.5. 
* gnu/packages/shells.scm (loksh): Update to 6.5.
 2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice f9f7e28bc4
gnu: cssc: Update to 1.4.1. 
* gnu/packages/version-control.scm (cssc): Update to 1.4.1.
 2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice e75f87b558
gnu: git-lfs: Update to 2.7.2. 
* gnu/packages/version-control.scm (git-lfs): Update to 2.7.2.
 2019-05-16 02:40:07 +02:00
Tobias Geerinckx-Rice f8ea653ea6
gnu: ndctl: Update to 65. 
* gnu/packages/disk.scm (ndctl): Update to 65.
 2019-05-16 02:40:07 +02:00
Mark H Weaver 294e43a32d
gnu: linux-libre: Update to 5.1.2. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.2.
(%linux-libre-hash): Update hash.
 2019-05-15 18:57:11 -04:00
Mark H Weaver 644ccc9011
gnu: linux-libre@4.19: Update to 4.19.43. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.43.
(%linux-libre-4.19-hash): Update hash.
 2019-05-15 18:56:17 -04:00
Mark H Weaver 0b67460918
gnu: linux-libre@4.14: Update to 4.14.119. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.119.
(%linux-libre-4.14-hash): Update hash.
 2019-05-15 18:55:33 -04:00
Mark H Weaver d9cc8659fc
gnu: linux-libre@4.9: Update to 4.9.176. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.176.
 2019-05-15 18:54:44 -04:00
Maxim Cournoyer b8e5de5608
gnu: python-jedi: Update to 0.13.3. 
* gnu/packages/python-xyz.scm (python-jedi): Update to 0.13.3.
(python2-jedi): Enable tests.
 2019-05-15 17:47:48 -04:00
Tobias Geerinckx-Rice dc555d86e1
gnu: elixir: Update to 1.8.2. 
* gnu/packages/elixir.scm (elixir): Update to 1.8.2.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 5a04c993b6
gnu: perl-data-page: Update to 2.03. 
* gnu/packages/perl.scm (perl-data-page): Update to 2.03.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 9fb0464c21
gnu: perl-text-csv: Update to 2.00. 
* gnu/packages/perl.scm (perl-text-csv): Update to 2.00.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 5af7428b79
gnu: ubridge: Don't use unstable tarball. 
* gnu/packages/networking.scm (ubridge)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice e8e2281ee9
gnu: ubridge: Update to 0.9.15. 
* gnu/packages/networking.scm (ubridge): Update to 0.9.15.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice fa3040d929
gnu: perl-time-duration: Update to 1.21. 
* gnu/packages/perl.scm (perl-time-duration): Update to 1.21.
 2019-05-15 21:23:57 +02:00
Tobias Geerinckx-Rice 103cdcd456
gnu: python-django-rq: Update to 1.3.1. 
* gnu/packages/django.scm (python-django-rq): Update to 1.3.1.
 2019-05-15 21:23:57 +02:00
Danny Milosavljevic 79bfa42287
gnu: Add python-pylzma. 
* gnu/packages/python-xyz.scm (python-pylzma): New variable.
(python2-pylzma): New variable.
 2019-05-15 15:22:22 +02:00
Tobias Geerinckx-Rice 43d9ed7792
gnu: lzip: Update to 1.21. 
* gnu/packages/compression.scm (lzip): Update to 1.21.
 2019-05-15 01:05:30 +02:00
Marius Bakke ba2d913192
gnu: Remove python2-httpretty. 
This package is severely out of date compared to its Python 3 counterpart and
difficult to upgrade.  Since it has no dependents in Guix and Python 2 is
officially deprecated by the end of this year, just remove it.

* gnu/packages/web.scm (python2-httpretty): Remove variable.
 2019-05-15 00:22:52 +02:00
Marius Bakke 556530c95c
gnu: vigra, notmuch: Use the Python3 Sphinx variant. 
* gnu/packages/image.scm (vigra)[native-inputs]: Change PYTHON2-SPHINX to
PYTHON-SPHINX.
* gnu/packages/mail.scm (notmuch)[native-inputs]: Likewise.
 2019-05-15 00:22:51 +02:00
Marius Bakke 75ea39da55
gnu: tbb: Add a source file name. 
* gnu/packages/tbb.scm (tbb)[source](file-name): New field.
 2019-05-15 00:22:51 +02:00
Marius Bakke b1b74ecffd
gnu: tbb: Update to 2019_U6. 
* gnu/packages/tbb.scm (tbb): Update to 2019_U6.
 2019-05-15 00:22:51 +02:00
Marius Bakke 128001487f
gnu: samba: Update to 4.10.3. 
* gnu/packages/samba.scm (samba): Update to 4.10.3.
 2019-05-15 00:22:51 +02:00
Marius Bakke 142a1684a7
gnu: oniguruma: Update to 6.9.2. 
* gnu/packages/textutils.scm (oniguruma): Update to 6.9.2.
 2019-05-15 00:22:51 +02:00
gabrielhdt 2f8e77bee2
gnu: Add ocaml-odoc. 
* gnu/packages/ocaml.scm (ocaml-odoc): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2019-05-14 21:40:36 +02:00
gabrielhdt 908a2ee0ed
gnu: Add ocaml-bisect-ppx. 
* gnu/packages/ocaml.scm (ocaml-bisect-ppx): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2019-05-14 21:37:57 +02:00
gabrielhdt e2506afcaf
gnu: Add ocaml-tyxml. 
* gnu/packages/ocaml.scm (ocaml-tyxml): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2019-05-14 21:36:34 +02:00
gabrielhdt 38089b549f
gnu: Add ocaml-markup. 
* gnu/packages/ocaml.scm (ocaml-markup): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2019-05-14 21:33:48 +02:00
Julien Lepiller 6b4a6c201a
gnu: python-requests-oauthlib: Fix building. 
* gnu/packages/python-web.scm (python-requests-oauthlib)[native-inputs]:
Add python-pyjwt for tests.
 2019-05-14 21:20:19 +02:00
Leo Famulari 7bd30ea988
gnu: certbot, python-acme: Update to 0.34.2. 
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.34.2.
 2019-05-14 15:06:29 -04:00
Julien Lepiller 3617d4f913
gnu: ocaml-base64: Update to 3.2.0. 
* gnu/packages/ocaml.scm (ocaml-base64): Update to 3.2.0.
[origin]: Use git-fetch.
(ocaml-piqilib)[origin]: Add a patch to fix building with new
versions of ocaml-base64.
* gnu/packages/patches/ocaml-piqilib-Update-base64.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2019-05-14 21:05:32 +02:00
Julien Lepiller 9f5a3ba659
gnu: ocaml-tsdl: Update to 0.9.6. 
* gnu/packages/ocaml.scm (ocaml-tsdl): Update to 0.9.6.
 2019-05-14 21:05:21 +02:00
Julien Lepiller 70a5701141
gnu: ocaml-ocb-stubblr: Fix build failures using it. 
* gnu/packages/ocaml.scm (ocaml-ocb-stubblr)[arguments]: Add a phase to
fix guix-specific issues.
 2019-05-14 21:05:14 +02:00
Julien Lepiller fbf786bd1d
gnu: ocaml-sqlite3: Update to 4.4.1. 
* gnu/packages/ocaml.scm (ocaml-sqlite3): Update to 4.4.1.
[origin]: Use git-fetch.
 2019-05-14 21:04:47 +02:00
Julien Lepiller 3cf62cd6cb
gnu: dune: Update to 1.9.3. 
* gnu/packages/ocaml.scm (dune): Update to 1.9.3.
 2019-05-14 21:04:30 +02:00
Marius Bakke 52cb7748cb
gnu: curl: Remove unused input. 
* gnu/packages/curl.scm (curl)[inputs]: Remove LIBSSH2-1.8.0.
* gnu/packages/ssh.scm (libssh2-1.8.0): Remove variable.
 2019-05-14 20:08:36 +02:00
Marius Bakke 828d3765a7
gnu: curl: Build against MIT Kerberos instead of GSS. 
* gnu/packages/curl.scm (curl)[inputs]: Change from GSS to MIT-KRB5.
[arguments]: Adjust accordingly.
 2019-05-14 20:07:01 +02:00
Marius Bakke fd6983d10f
gnu: gsasl: Use the MIT Kerberos implementation instead of GSS. 
* gnu/packages/gsasl.scm (gsasl)[inputs]: Change from GSS to MIT-KRB5.
[arguments]: New field.
 2019-05-14 20:07:01 +02:00
Ricardo Wurmus 44323e63a3
gnu: Add ataqv. 
* gnu/packages/bioinformatics.scm (ataqv): New variable.
 2019-05-14 16:15:19 +02:00
Björn Höfling 46ca002d1c
gnu: burp: Update to 2.3.6. 
* gnu/packages/backup.scm (burp):  Update to 2.3.6.
 2019-05-14 14:19:19 +02:00
Björn Höfling 91a403a457
gnu: anthy: Update source URI. 
* gnu/packages/anthy (anthy)[source]: Update URI.
 2019-05-14 14:00:55 +02:00
Björn Höfling 53923b0fb1
gnu: jnettop: Use archived source and homepage. 
* gnu/packages/admin.scm (jnettop)[source,home-page]:
Use archive.org mirror.
 2019-05-14 14:00:55 +02:00
Björn Höfling 5395cec2c5
gnu: xdot: Update to 1.1. 
* gnu/packages/graphviz.scm (xdot): Update to 1.1.
 2019-05-14 14:00:54 +02:00
Efraim Flashner 1731b29742
gnu: font-hermit: Download as 'url-fetch/tarbomb'. 
* gnu/packages/fonts.scm (font-hermit)[source]: Use 'url-fetch/tarbomb'
method.
[arguments]: Remove custom phases.
 2019-05-14 14:47:44 +03:00
LaFreniere, Joseph dcc3d4030f
gnu: Add emacs-evil-cleverparens 
* gnu/packages/emacs-xyz.scm (emacs-evil-cleverparens): New
  variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-14 12:11:05 +02:00
Zzull 50867421f9
gnu: Add font-hermit 
* gnu/packages/fonts.scm (font-hermit): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-14 12:11:04 +02:00
Ludovic Courtès 8d080506f4
gnu: munge: Pass '--localstatedir=/var'. 
Previously, Munge users such as Slurm would fail with:

  squeue: error: Munge encode failed: Failed to access "/gnu/store/…-munge-0.5.13/var/run/munge/munge.socket.2": No such file or directory
  squeue: error: authentication: Socket communication error

* gnu/packages/admin.scm (munge)[source](modules, snippet): New fields.
[arguments]: New field.
 2019-05-14 12:11:04 +02:00
Ludovic Courtès 3ea420f337
gnu: hdf5: Add dependency on Perl. 
* gnu/packages/maths.scm (hdf5)[native-inputs]: Add PERL.
 2019-05-14 12:11:04 +02:00
Ludovic Courtès 549d15712f
gnu: hdf5: Build a thread-safe library. 
* gnu/packages/maths.scm (hdf5)[arguments]: Pass "--enable-threadsafe
--with-pthread --enable-unsupported".
 2019-05-14 12:11:04 +02:00
Pierre Neidhardt ae5de93ae2
gnu: uncrustify: Update to 0.69.0. 
* gnu/packages/code.scm (uncrustify): Update to 0.69.0.
 2019-05-14 11:47:08 +02:00
Maxim Cournoyer 112fd34fee
gnu: cqfd: Update to 5.1.0. 
* gnu/packages/docker.scm (cqfd): Update to 5.1.0.
[description]: Fix typo.
 2019-05-13 21:50:34 -04:00
Julien Lepiller 1bba3e8ca8
gnu: Add harmonist. 
gnu/packages/games.scm (harmonist): New variable.
 2019-05-13 23:20:00 +02:00
Julien Lepiller 7c1c42c4b6
gnu: go-github.com-nsf-termbox-go: Update to 0.0.0-1.288510b. 
* gnu/packages/terminals.scm (go-github.com-nsf-termbox-go): Update to
0.0.0-1.288510b.
 2019-05-13 23:19:56 +02:00
Marius Bakke 993d8164e4
gnu: exiv2: Use HTTPS URLs. 
* gnu/packages/image.scm (exiv2)[source, home-page]: Use HTTPS.
 2019-05-13 14:16:48 +02:00
Marius Bakke 2508b07517
gnu: gpscorrelate: Update home page. 
* gnu/packages/gps.scm (gpscorrelate)[source, home-page]: Update for new
maintainer, as noted on <https://github.com/freefoote/gpscorrelate>.
 2019-05-13 14:16:48 +02:00
Marius Bakke 1015099d50
gnu: hugin: Update to 2019.0.0. 
* gnu/packages/photo.scm (hugin): Update to 2019.0.0.
 2019-05-13 14:16:48 +02:00
Marius Bakke 563ecba5cf
gnu: ImageMagick: Update to 6.9.10-45. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-45.
 2019-05-13 14:14:42 +02:00
Marius Bakke 9dc6ff5a85
gnu: python-packaging: Update to 19.0. 
* gnu/packages/python-xyz.scm (python-packaging): Update to 19.0.
 2019-05-13 14:14:42 +02:00
Marius Bakke 4cd4173d5b
gnu: python-pygments: Update to 2.4.0. 
* gnu/packages/python-xyz.scm (python-pygments): Update to 2.4.0.
 2019-05-13 14:14:42 +02:00
Marius Bakke 4a5c79346a
gnu: python-jinja2: Update to 2.10.1. 
* gnu/packages/python-xyz.scm (python-jinja2): Update to 2.10.1.
 2019-05-13 14:14:42 +02:00
Marius Bakke 0ace73f142
gnu: ALSA: Update to 1.1.9. 
* gnu/packages/linux.scm (alsa-lib, alsa-utils, alsa-plugins): Update to 1.1.9.
* gnu/packages/pulseaudio.scm (pulseaudio)[arguments]: Add phase to adjust
ALSA header file name.
 2019-05-13 14:14:41 +02:00
Marius Bakke 954b3c8b65
gnu: libinput: Update to 1.13.2. 
* gnu/packages/freedesktop.scm (libinput): Update to 1.13.2.
 2019-05-13 14:14:41 +02:00
Ludovic Courtès 04a3ecc79e
gnu: Remove 'gcc-glibc-2.27' and 'gcc-glibc-2.26'. 
These top-level references to GCC could cause problems, such as:

  $ guix build -e '(@ (gnu packages gcc) gcc)' -n
  guix build: error: failed to evaluate expression '(@ (gnu packages gcc) gcc)':
  In procedure module-lookup: Unbound variable: gcc

Regression introduced in 3ed497d42a.

* gnu/packages/base.scm (gcc-glibc-2.27, gcc-glibc-2.26): Remove.
 2019-05-13 11:36:11 +02:00
Ludovic Courtès a8e7ba7536
gnu: gdb: Add version 8.3. 
* gnu/packages/gdb.scm (gdb): Rename to...
(gdb-8.2): ... this.
(gdb-8.3): New variable.
(gdb): Define as an alias for GDB-8.2.
 2019-05-13 10:12:14 +02:00
Carl Dong 3ed497d42a
gnu: Allow building gcc with non-default libc. 
* gnu/packages/base.scm (make-gcc-libc): New procedure, returns a gcc
  that targets a specified libc.
  (gcc-glibc-2.26, gcc-glibc-2.27): New public variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-13 09:46:58 +02:00
Carl Dong 102d307520
gnu: cross-base: Allow using non-default glibc. 
* gnu/packages/cross-base.scm (cross-libc, native-libc, cross-newlib?):
  Add 'libc' optional argument to specify using a non-default glibc
  package.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-13 09:46:58 +02:00
Ricardo Wurmus d815728525
gnu: emacs-slack: Update to 0.0.2-6.10fbb81. 
* gnu/packages/emacs-xyz.scm (emacs-slack): Update to 0.0.2-6.10fbb81.
[arguments]: Set HOME before compiling source files.
 2019-05-13 09:10:41 +02:00
Ricardo Wurmus a624c36310
gnu: gajim: Fix error when GAJIM_PLUGIN_PATH is not set. 
Fixes <https://bug.gnu.org/35606>

* gnu/packages/messaging.scm (gajim)[arguments]: Handle case when
GAJIM_PLUGIN_PATH is unset in add-plugins-dir phase.
 2019-05-13 09:03:03 +02:00
Rutger Helling 9562790d51
gnu: mesa: Update to 19.0.4. 
* gnu/packages/gl.scm (mesa): Update to 19.0.4.
 2019-05-13 08:29:37 +02:00
Gábor Boskovits 70d23edf93
gnu: openjdk11: Suppress internal in version. 
* gnu/packages/java.scm (openjdk11)[configure-flags]: Add --with-version-pre= .
 2019-05-13 08:12:26 +02:00
Timothy Sample a430a3501a
gnu: gdm: Fix configuration file discovery. 
The configuration file loading code moved to a new file in version 2.28.

* gnu/package/gnome.scm (gdm)[arguments]: Change the pre-configure phase
to patch configuration file discovery into the 'gdm-settings.c' file.
 2019-05-12 20:01:35 -04:00
Marius Bakke 395c142ed9
gnu: python-requests-oauthlib: Update to 1.2.0. 
* gnu/packages/python-web.scm (python-requests-oauthlib): Update to 1.2.0.
 2019-05-13 00:17:37 +02:00
Marius Bakke c8a7cc69c9
gnu: python-oauthlib: Update to 3.0.1. 
* gnu/packages/python-web.scm (python-oauthlib): Update to 3.0.1.
[arguments]: Replace check phase with pytest invokation.
[native-inputs]: Remove PYTHON-NOSE.  Add PYTHON-PYTEST and PYTHON-PYTEST-COV.
[properties]: Remove.
(python2-oauthlib)[native-inputs]: Remove PYTHON2-UNITTEST2.
 2019-05-13 00:17:37 +02:00
Marius Bakke e7c67f1b69
gnu: python-oauthlib: Propagate required inputs. 
* gnu/packages/python-web.scm (python-oauthlib)[native-inputs]: Move
PYTHON-CRYPTOGRAPHY, PYTHON-PYJWT, and PYTHON-BLINKER ...
[propagated-inputs]: ... here.
 2019-05-13 00:17:37 +02:00
Marius Bakke 5f7e3ac066
gnu: python-oauthlib: Update home page. 
* gnu/packages/python-web.scm (python-oauthlib)[home-page]: Follow redirect to
<https://github.com/oauthlib/oauthlib>.
 2019-05-13 00:17:37 +02:00
Marius Bakke f94051e61f
gnu: python-mysqlclient: Don't depend on MySQL. 
* gnu/packages/databases.scm (python-mysqlclient)[native-inputs]: Move MARIADB
from here to ...
[inputs]: ... here.  Remove MYSQL.
 2019-05-13 00:17:37 +02:00
Marius Bakke 9c6fb330ad
gnu: perl-dbd-mysql: Depend on MariaDB rather than MySQL. 
* gnu/packages/databases.scm (perl-dbd-mysql)[propagated-inputs]: Change from
MYSQL to MARIADB.
 2019-05-13 00:17:37 +02:00
Marius Bakke d5d5403033
gnu: python-future: Update to 0.17.1. 
* gnu/packages/python-xyz.scm (python-future): Update to 0.17.1.
 2019-05-13 00:17:37 +02:00
Marius Bakke 0447a2a82b
gnu: postgresql@9: Update to 9.6.13 [fixes CVE-2019-10129, CVE-2019-10130]. 
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.13.
 2019-05-13 00:17:37 +02:00
Marius Bakke 6ced4433c7
gnu: speech-dispatcher: Update to 0.9.1. 
* gnu/packages/speech.scm (speech-dispatcher): Update to 0.9.1.
[arguments]: Add "--with-ibmtts=no" to #:configure-flags.
[license]: Remove GPL2.
 2019-05-13 00:17:37 +02:00
gabrielhdt 62f6f3bb04
gnu: Add emacs-ediprolog. 
* gnu/packages/emacs-xyz.scm (emacs-ediprolog): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-12 23:52:17 +02:00
Gábor Boskovits 59199e1adb
gnu: icedtea-7: Disable os version check. 
* gnu/packages/java.scm (icedtea-7)[arguments]:
Add phase 'disable-os-version-check.
 2019-05-12 09:19:11 +02:00
Gábor Boskovits 0bc11cc745
gnu: icedtea-6: Disable os version check. 
* gnu/packages/java.scm (icedtea-6)[arguments]:
Add phase 'disable-os-version-check.
 2019-05-12 09:19:03 +02:00
Mark H Weaver 152030ffdf
gnu: linux-libre: Update to 5.1.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.1.
(%linux-libre-hash): Update hash.
 2019-05-11 20:13:18 -04:00
Mark H Weaver 22e40d0911
gnu: linux-libre@4.19: Update to 4.19.42. 
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.42.
(%linux-libre-4.19-hash): Update hash.
 2019-05-11 20:12:23 -04:00
Mark H Weaver 877747ebe1
gnu: linux-libre@4.14: Update to 4.14.118. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.118.
(%linux-libre-4.14-hash): Update hash.
 2019-05-11 20:11:32 -04:00
Mark H Weaver 2157c1210e
gnu: linux-libre@4.9: Update to 4.9.175. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.175.
 2019-05-11 20:10:28 -04:00
Tobias Geerinckx-Rice 2ce144eebb
gnu: acpica: Update to 20190509. 
* gnu/packages/admin.scm (acpica): Update to 20190509.
 2019-05-11 23:35:34 +02:00
Tobias Geerinckx-Rice 980808075c
gnu: xtensor: Update to 0.20.5. 
* gnu/packages/algebra.scm (xtensor): Update to 0.20.5.
 2019-05-11 23:35:34 +02:00
Tobias Geerinckx-Rice 0b69897bda
gnu: xtl: Update to 0.6.4. 
* gnu/packages/cpp.scm (xtl): Update to 0.6.4.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice 7d9fa5f376
gnu: picard: Read disc IDs. 
* gnu/packages/music.scm (picard)[inputs]: Add python-discid.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice e28b0798d2
gnu: picard: Don't check for updates. 
* gnu/packages/music.scm (picard)[arguments]: Add ‘--disable-autoupdate’
to #:configure-flags.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice 8eba82753a
gnu: iproute2: Update to 5.1.0. 
* gnu/packages/linux.scm (iproute2): Update to 5.1.0.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice cc4e5e1330
gnu: gegl: Update to 0.4.16. 
* gnu/packages/gimp.scm (gegl): Update to 0.4.16.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice d09a8dffdd
gnu: electrum: Update to 3.3.5. 
* gnu/packages/finance.scm (electrum): Update to 3.3.5.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice 0691567d78
gnu: libkomparediff2: Update to 19.04.1. 
* gnu/packages/kde.scm (libkomparediff2): Update to 19.04.1.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice 40b5ec2f3e
gnu: libkomparediff2: Don't use NAME in source URI. 
* gnu/packages/kde.scm (libkomparediff2)[source]: Hard-code NAME.
 2019-05-11 23:35:33 +02:00
Tobias Geerinckx-Rice 819488fb95
gnu: libkomparediff2: Fix source file name. 
* gnu/packages/kde.scm (libkomparediff2)[source]: Remove (incorrect)
FILE-NAME.
 2019-05-11 23:35:32 +02:00
Tobias Geerinckx-Rice ef81faeec0
gnu: nethack: Update to 3.6.2. 
* gnu/packages/games.scm (nethack): Update to 3.6.2.
 2019-05-11 23:35:32 +02:00
Diego Nicola Barbato 6bf795329a
gnu: denemo: Use older version of gtksourceview. 
* gnu/packages/music.scm (denemo)[inputs]: Replace gtksourceview with
gtksourceview-3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>.
 2019-05-11 21:33:19 +02:00
Oleg Pykhalov 3a228f7a0a
gnu: Add emacs-dired-rsync. 
* gnu/packages/emacs-xyz.scm (emacs-dired-rsync): New variable.
 2019-05-11 21:22:35 +03:00
Ludovic Courtès 3b8699f9c2
gnu: shepherd: Update to 0.6.1. 
* gnu/packages/admin.scm (shepherd): Update to 0.6.1.
 2019-05-11 20:10:26 +02:00
Tobias Geerinckx-Rice e247244e00
gnu: picard: Return #t from phases. 
* gnu/packages/music.scm (picard)[arguments]: Return #t from
‘patch-source’ phase.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice 251448f7f5
gnu: picard: Use build system features. 
* gnu/packages/music.scm (picard)[arguments]: Leverage #:use-setuptools?
and #:configure-flags instead of a custom ‘install’ phase.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice b421e91558
gnu: picard: Update to 2.1.3. 
* gnu/packages/music.scm (picard): Update to 2.1.3.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice e174699534
gnu: libshout: Update to 2.4.2. 
* gnu/packages/xiph.scm (libshout): Update to 2.4.2.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice 7824fbf8c5
gnu: libshout: Don't use NAME in source URI. 
* gnu/packages/xiph.scm (libshout)[source]: Hard-code NAME.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice 4088d809c0
gnu: upower: Update to 0.99.10. 
* gnu/packages/gnome.scm (upower): Update to 0.99.10.
* gnu/packages/patches/upower-builddir.patch: Adapt.
 2019-05-11 19:55:39 +02:00
Tobias Geerinckx-Rice 90d37addbe
gnu: powwow: Update to 1.2.19. 
* gnu/packages/games.scm (powwow): Update to 1.2.19.
 2019-05-11 19:55:38 +02:00
Tobias Geerinckx-Rice 93ce003741
gnu: wesnoth: Update to 1.14.7. 
* gnu/packages/games.scm (wesnoth): Update to 1.14.7.
 2019-05-11 19:55:38 +02:00
Tobias Geerinckx-Rice 9cf65f051c
gnu: chroma: Update to 1.17. 
* gnu/packages/games.scm (chroma): Update to 1.17.
 2019-05-11 19:55:38 +02:00
Tobias Geerinckx-Rice 6cc9533eb1
gnu: qbittorrent: Update to 4.1.6. 
* gnu/packages/bittorrent.scm (qbittorrent): Update to 4.1.6.
 2019-05-11 19:55:38 +02:00
Tobias Geerinckx-Rice 4ac7112748
gnu: man-db: Update to 2.8.5. 
* gnu/packages/man.scm (man-db): Update to 2.8.5.
[arguments]: Add systemd unit directory to #:configure-flags.
 2019-05-11 19:55:38 +02:00
Julien Lepiller c087a90e06
gnu: wine-staging: Update to 4.8. 
* gnu/packages/wine.scm (wine-staging,wine-staging-patchset-data):
Update to 4.8.
 2019-05-11 17:06:14 +02:00
Arun Isaac 6dedf0aeb2
gnu: emacs-use-package: Update to 2.4. 
* gnu/packages/emacs-xyz.scm (emacs-use-package): Update to 2.4.
 2019-05-11 17:06:53 +05:30
Oleg Pykhalov 59e72ac8f5
gnu: Add emacs-rotate-text. 
* gnu/packages/emacs-xyz.scm (emacs-rotate-text): New variable.
 2019-05-11 14:06:13 +03:00
Ricardo Wurmus 21ec924868
gnu: r-hdf5array: Update to 1.12.1. 
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.1.
 2019-05-11 12:05:35 +02:00
Ricardo Wurmus 2521bb1d7d
gnu: r-sfsmisc: Update to 1.1-4. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-4.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus bc4e1114f3
gnu: r-dt: Update to 0.6. 
* gnu/packages/statistics.scm (r-dt): Update to 0.6.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus 9d38b15b2e
gnu: r-rversions: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-rversions): Update to 2.0.0.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus ae9ed1390f
gnu: r-quadprog: Update to 1.5-7. 
* gnu/packages/maths.scm (r-quadprog): Update to 1.5-7.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus 4238c3ee2a
gnu: r-styler: Update to 1.1.1. 
* gnu/packages/cran.scm (r-styler): Update to 1.1.1.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus 080c706225
gnu: r-bookdown: Update to 0.10. 
* gnu/packages/cran.scm (r-bookdown): Update to 0.10.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus 53dbf3a2ac
gnu: r-future: Update to 1.13.0. 
* gnu/packages/cran.scm (r-future): Update to 1.13.0.
 2019-05-11 12:05:34 +02:00
Ricardo Wurmus 407a04fa03
gnu: r-grimport2: Update to 0.1-5. 
* gnu/packages/cran.scm (r-grimport2): Update to 0.1-5.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus a75c6d9c63
gnu: r-rcmdcheck: Update to 1.3.3. 
* gnu/packages/cran.scm (r-rcmdcheck): Update to 1.3.3.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus c02f574d38
gnu: r-fs: Update to 1.3.1. 
* gnu/packages/cran.scm (r-fs): Update to 1.3.1.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus 86ad5dbc62
gnu: r-parsedate: Update to 1.2.0. 
* gnu/packages/cran.scm (r-parsedate): Update to 1.2.0.
[propagated-inputs]: Add r-rematch2.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus 4d970db846
gnu: r-processx: Update to 3.3.1. 
* gnu/packages/cran.scm (r-processx): Update to 3.3.1.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus 00399a780b
gnu: r-ggrepel: Update to 0.8.1. 
* gnu/packages/cran.scm (r-ggrepel): Update to 0.8.1.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus 7a67bca198
gnu: r-dimred: Update to 0.2.3. 
* gnu/packages/cran.scm (r-dimred): Update to 0.2.3.
 2019-05-11 12:05:33 +02:00
Ricardo Wurmus d1d6e13eb6
gnu: r-regioner: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.1.
 2019-05-11 12:05:32 +02:00
Jonathan Brielmaier 41e09a159a
gnu: osc: Update to 0.165.0. 
* gnu/packages/build-tools.scm (osc): Update to 0.165.0.
[source]: Use git-fetch.
[arguments]: Use python3. osc_hotshot.py is gone. So, do not attempt to delete
it. Rename fix-filename-and-remove-unused phase to fix-filename phase.
[inputs]: Add rpm. Remove python2-urlgrabber. Replace python2-m2crypto and
python2-pycurl with python-m2crypto and python-pycurl.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 14:08:52 +05:30
Jonathan Brielmaier c0023514a3
gnu: rpm: Update to 4.14.2.1. 
* gnu/packages/package-management.scm (rpm): Update to 4.14.2.1.
[inputs]: Use python instead of python-2.
[home-page]: Use HTTPS URI.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 14:08:51 +05:30
HiPhish c3ebaec531
gnu: neovim: Update to 0.3.5. 
* gnu/packages/vim.scm (neovim): Update to 0.3.5.
[source]: Use git-fetch.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2019-05-11 12:56:13 +05:30
Leo Famulari 755a6027ce
gnu: Go 1.11: Update to 1.11.10. 
* gnu/packages/golang.scm (go-1.11): Update to 1.11.10.
 2019-05-10 13:30:07 -04:00
Nicolas Goaziou 7a9158f83e
gnu: emacs-auctex: Update to 12.1.2. 
* gnu/packages/emacs-xyz.scm (emacs-auctex): Update to 12.1.2.
 2019-05-10 19:23:37 +02:00
Nicolas Goaziou de1206dc5f
gnu: emacs-debbugs: Update to 0.18. 
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.18.
 2019-05-10 19:20:18 +02:00
Ricardo Wurmus d13f3a033e
gnu: gnome-tweak-tool: Update to 3.28.1. 
Fixes <https://bugs.gnu.org/35597>.

* gnu/packages/gnome.scm (gnome-tweak-tool): Deprecate and rename...
(gnome-tweaks): ...to this.  Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust configure flags; pass glib-or-gtk? flag; remove custom
phases that are now provided by the meson-build-system; add phases "wrap" and
"wrap-gi-typelib".
[native-inputs]: Remove meson-for-build and ninja.
[home-page]: Update.
[description]: Use "Tweaks" instead of "Tweak Tool".
* gnu/packages/patches/gnome-tweak-tool-search-paths.patch: Rename file...
* gnu/packages/patches/gnome-tweaks-search-paths.patch: ...to this.
* gnu/local.mk (dist_patch_DATA): Update patch file name.
 2019-05-10 13:31:32 +02:00
Ricardo Wurmus 496b024fde
gnu: Add r-rqc. 
* gnu/packages/bioconductor.scm (r-rqc): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 5e0241db84
gnu: Add r-quasr. 
* gnu/packages/bioconductor.scm (r-quasr): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 5865606459
gnu: Add r-rhisat2. 
* gnu/packages/bioconductor.scm (r-rhisat2): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 1444153913
gnu: Add r-sgseq. 
* gnu/packages/bioconductor.scm (r-sgseq): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 30f1029f4c
gnu: Add r-xgboost. 
* gnu/packages/cran.scm (r-xgboost): New variable.
 2019-05-10 13:31:03 +02:00
Ricardo Wurmus 29591ca611
gnu: Add r-citr. 
* gnu/packages/cran.scm (r-citr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus afc4370d4c
gnu: Add r-refmanager. 
* gnu/packages/cran.scm (r-refmanager): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 85625cae66
gnu: Add r-ggfortify. 
* gnu/packages/cran.scm (r-ggfortify): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus c9487dfadc
gnu: Add r-plot3d. 
* gnu/packages/cran.scm (r-plot3d): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 70debac5f1
gnu: Add r-enrichr. 
* gnu/packages/cran.scm (r-enrichr): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 5bea832f72
gnu: Add r-dalex. 
* gnu/packages/cran.scm (r-dalex): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 4d06ef4b71
gnu: Add r-rbowtie. 
* gnu/packages/bioconductor.scm (r-rbowtie): New variable.
 2019-05-10 13:31:02 +02:00
Ricardo Wurmus 8c42f8f6e8
gnu: Add r-iclusterplus. 
* gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
 2019-05-10 13:31:01 +02:00
Mark H Weaver b40a36baff
gnu: linux-libre: Update to 5.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.
(%linux-libre-hash): Update hash.
(%linux-libre-5.0-patches): Rename to ...
(%linux-libre-5.1-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron)
(linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches.
(vhba-module): Move definition below the kernel packages.
* gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
 2019-05-10 00:00:49 -04:00
Ivan Petkov 3d8033af42
gnu: rust: Update to 1.34.1. 
* gnu/packages/rust.scm (rust): Update to 1.34.1.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov 4ed20d3cfe
gnu: rust: Make source derivations smaller. 
* gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure.
(rust-bootstrapped-package-pre-1.32): Delete procedure.
(rust-bootstrapped-package): Remove optional keys, and return an origin.
(rust-uri): New variable.
(mrustc): Change native-input "rust" to use source of rust-1.19.
(rust-1.19)[source]: Define package source.
(rust-1.20): Use rust-bootstrapped-package.
(rust-1.21): Likewise.
(rust-1.22): Likewise.
(rust-1.23): Likewise.
(rust-1.24): Likewise.
(rust-1.25): Likewise.
(rust-1.26): Likewise.
(rust-1.27): Likewise.
(rust-1.28): Likewise.
(rust-1.29): Likewise.
(rust-1.30): Likewise.
(rust-1.31): Likewise.
(rust-1.32): Likewise.
(rust-1.33): Likewise.
(rust-1.34): Likewise.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:09 +02:00
Ivan Petkov bea01c0d2b
gnu: rust: Delete install logs and manifests. 
* gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]:
New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ivan Petkov e88735b45f
build/cargo-utils: Remove "src-name" parameter. 
* gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases>
[patch-cargo-checksums]: Delete "null-file" variable.
* gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable.
* gnu/packages/rust.scm (rust-1.19): Remove reference to
"%cargo-reference-project-file".
* guix/build/cargo-utils.scm (generate-checksums): Remove "src-name"
parameter.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-05-10 00:44:08 +02:00
Ricardo Wurmus d78010b81e
gnu: gcc-4.7: Hide package. 
* gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
 2019-05-09 23:18:39 +02:00
Ricardo Wurmus 935568d5ce
gnu: emacs-dash: Update to 2.16.0. 
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
 2019-05-09 22:51:33 +02:00
Ricardo Wurmus b97b4624d0
gnu: Add guile-file-names. 
* gnu/packages/guile-xyz.scm (guile-file-names): New variable.
 2019-05-09 22:41:14 +02:00
Tobias Geerinckx-Rice ae623b3f9d
gnu: seabios: Update to 1.12.1. 
This is a stable release despite the missing tarball.
<https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/>

* gnu/packages/firmware.scm (seabios): Update to 1.12.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:16:54 +02:00
Tobias Geerinckx-Rice 05de4c346d
gnu: man-pages: Update to 5.01. 
* gnu/packages/man.scm (man-pages): Update to 5.01.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice 34dce89a0c
gnu: emacs-sml-mode: Update to 6.9. 
* gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
 2019-05-09 21:16:53 +02:00
Tobias Geerinckx-Rice b03a4ed465
gnu: cdemu-client: Update to 3.2.1. 
* gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
 2019-05-09 21:13:29 +02:00
Tobias Geerinckx-Rice 97dbf75a56
gnu: cdemu-daemon: Update to 3.2.2. 
* gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice d201571754
gnu: libmirage: Update to 3.2.2. 
* gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice 819b3b8201
gnu: vhba-module: Update to 20190410. 
* gnu/packages/linux.scm (vhba-module): Update to 20190410.
 2019-05-09 21:13:28 +02:00
Tobias Geerinckx-Rice 38878020b0
gnu: cloc: Update to 1.82. 
* gnu/packages/code.scm (cloc): Update to 1.82.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
 2019-05-09 21:13:28 +02:00
Marius Bakke 18160c3408
gnu: Use mirror://kernel.org in source URIs. 
* gnu/packages/linux.scm (bridge-utils, cpufrequtils, sbc)[source](uri): Use
"mirror://kernel.org" instead of www.kernel.org directly.
 2019-05-09 14:06:07 +02:00
Marius Bakke aeb1ed1abc
gnu: wpa_supplicant: Update to 2.8 [security fixes]. 
This release fixes CVE-2019-9494, CVE-2019-9495, CVE-2019-9496, CVE-2019-9497,
CVE-2019-9498, CVE-2019-9499, and CVE-2019-11555.

* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.8.
[source](snippet): New field.  Disable D-Bus.
[arguments]: Change CONFIG_TLS to use OpenSSL rather than GnuTLS.  This is
required by many of the new default build-time settings.
[inputs]: Remove GNUTLS and LIBGCRYPT.  Add OPENSSL.
(wpa-supplicant)[arguments]: Remove obsolete CONFIG_CTRL_IFACE_DBUS=y.
 2019-05-09 13:43:03 +02:00
Marius Bakke 3fde051bfd
gnu: libtorrent-rasterbar: Update to 1.1.13. 
* gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.13.
 2019-05-09 13:43:03 +02:00
Marius Bakke 3a32be71eb
gnu: leveldb: Update to 1.22. 
* gnu/packages/databases.scm (leveldb): Update to 1.22.
 2019-05-09 13:43:03 +02:00
Josh Holland 4506018e28
gnu: Mercurial: Update to 5.0 
* gnu/packages/version-control.scm (mercurial): Update to 5.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-05-09 12:11:37 +02:00
Ludovic Courtès 56038bac60
gnu: Add hostapd. 
* gnu/packages/admin.scm (hostapd): New variable.
 2019-05-09 12:11:36 +02:00
Maxim Cournoyer 063edf928a
gnu: Add python-pylibmc. 
* gnu/packages/databases.scm (python-pylibmc, python2-pylibmc): New variables.
 2019-05-09 00:22:38 -04:00