Commit Graph

38687 Commits

Author SHA1 Message Date
Ricardo Wurmus 7c888138ef
gnu: r-massspecwavelet: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-massspecwavelet): Update to 1.50.0.
2019-05-06 00:14:58 +02:00
Ricardo Wurmus 88469def75
gnu: r-xbseq: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-xbseq): Update to 1.16.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 0334b203d7
gnu: r-roar: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-roar): Update to 1.20.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 7f4957b24e
gnu: r-yarn: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yarn): Update to 1.10.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 2feea2d22a
gnu: r-quantro: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-quantro): Update to 1.18.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus f48e29daa3
gnu: r-yaqcaffy: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-yaqcaffy): Update to 1.44.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 38c5d13a73
gnu: r-simpleaffy: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-simpleaffy): Update to 2.60.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 56576bea97
gnu: r-gcrma: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-gcrma): Update to 2.56.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus edba69b2ff
gnu: r-yapsa: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yapsa): Update to 1.10.0.
2019-05-06 00:14:57 +02:00
Ricardo Wurmus 3cdc5d1a7b
gnu: r-somaticsignatures: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-somaticsignatures): Update to 2.20.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus 128c6d59f0
gnu: r-gtrellis: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.16.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus 1269a926c0
gnu: r-yamss: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-yamss): Update to 1.10.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus 2a6d838337
gnu: r-ebimage: Update to 4.26.0.
* gnu/packages/bioconductor.scm (r-ebimage): Update to 4.26.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus b68a9e80f4
gnu: r-aucell: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-aucell): Update to 1.6.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus 9da2021f49
gnu: r-allelicimbalance: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-allelicimbalance): Update to 1.22.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus ee1a45d719
gnu: r-annotationtools: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-annotationtools): Update to 1.58.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus 69a2ec5447
gnu: r-annotationfuncs: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-annotationfuncs): Update to 1.34.0.
2019-05-06 00:14:56 +02:00
Ricardo Wurmus e2e1dea2bb
gnu: r-abaenrichment: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.14.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus bab06a6ff3
gnu: r-gofuncr: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.4.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus bcc233c1a6
gnu: r-atacseqqc: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.0.
[propagated-inputs]: Add r-edger.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus 19ee76379c
gnu: r-genomicscores: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-genomicscores): Update to 1.8.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus aa0ebfd2eb
gnu: r-motifstack: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.28.0.
[propagated-inputs]: Replace r-grimport with r-grimport2.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus f7a495b159
gnu: r-motiv: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-motiv): Update to 1.40.0.
2019-05-06 00:14:55 +02:00
Ricardo Wurmus a5860ebe87
gnu: r-rgadem: Update to 2.31.0.
* gnu/packages/bioconductor.scm (r-rgadem): Update to 2.31.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus e33c25ff2c
gnu: r-bacon: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bacon): Update to 1.12.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus b7ddf0f048
gnu: r-abseqr: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-abseqr): Update to 1.2.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus 1aadddeaa9
gnu: r-a4: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus ae1730ae1a
gnu: r-a4base: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4base): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus e5a36543ac
gnu: r-a4reporting: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4reporting): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus 0b6091621f
gnu: r-a4preproc: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4preproc): Update to 1.32.0.
2019-05-06 00:14:54 +02:00
Ricardo Wurmus 82de77da5a
gnu: r-a4classif: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4classif): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus b077e3db2a
gnu: r-a4core: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-a4core): Update to 1.32.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 8bef9df4d4
gnu: r-annaffy: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.56.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 8265a1115e
gnu: r-mlinterfaces: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.64.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 1a3e33be23
gnu: r-clusterprofiler: Update to 3.12.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.12.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 77d28d665c
gnu: r-enrichplot: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.4.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 1990ff9d10
gnu: r-dose: Update to 3.10.0.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.10.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus ebffd24c10
gnu: r-fgsea: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-fgsea): Update to 1.10.0.
[propagated-inputs]: Add r-bh.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 3e5ee6f69f
gnu: r-sigpathway: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-sigpathway): Update to 1.52.0.
2019-05-06 00:14:53 +02:00
Ricardo Wurmus 0a41b5db95
gnu: r-anota: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-anota): Update to 1.32.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus 24cf7bad99
gnu: r-gosemsim: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.10.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus 376d1fe759
gnu: r-heatplus: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.30.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus c2effdedc0
gnu: r-varianttools: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus bc083ecab8
gnu: r-triform: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-triform): Update to 1.26.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus 2ee91179d1
gnu: r-ioniser: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-ioniser): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus 48c2a7eb39
gnu: r-linnorm: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-linnorm): Update to 2.8.0.
2019-05-06 00:14:52 +02:00
Ricardo Wurmus 5551b07cde
gnu: r-lumi: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-lumi): Update to 2.36.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 2986b51ffe
gnu: r-methylumi: Update to 2.30.0.
* gnu/packages/bioconductor.scm (r-methylumi): Update to 2.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 8c0fae3cd4
gnu: r-minfi: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-minfi): Update to 1.30.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 693a98056c
gnu: r-bumphunter: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bumphunter): Update to 1.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 409f4dd652
gnu: r-siggenes: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-siggenes): Update to 1.58.0.
[propagated-inputs]: Add r-scrime.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus fadc6db82d
gnu: r-illuminaio: Update to 0.26.0.
* gnu/packages/bioconductor.scm (r-illuminaio): Update to 0.26.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 2d4430877a
gnu: r-geoquery: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-geoquery): Update to 2.52.0.
2019-05-06 00:14:51 +02:00
Ricardo Wurmus 26c72fffc1
gnu: r-scone: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus 7baa59ed4d
gnu: r-scdd: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-scdd): Update to 1.8.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus 6a2c58b7e0
gnu: r-noiseq: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-noiseq): Update to 2.28.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus 78b6326785
gnu: r-monocle: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-monocle): Update to 2.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus a0ff725d6a
gnu: r-mast: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-mast): Update to 1.10.0.
[propagated-inputs]: Add r-blme.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus 3fd2ea8883
gnu: r-icobra: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-icobra): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus bcd8b7a9bd
gnu: r-ihw: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-ihw): Update to 1.12.0.
2019-05-06 00:14:50 +02:00
Ricardo Wurmus 61c79d55e3
gnu: r-lpsymphony: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-lpsymphony): Update to 1.12.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus 4a3c47e940
gnu: r-ebseq: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ebseq): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus 301c4ff12a
gnu: r-deds: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-deds): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus d5f3c0d09e
gnu: r-dnacopy: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-dnacopy): Update to 1.58.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus d941918599
gnu: r-copynumber: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.24.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus 58a43fc28e
gnu: r-chipexoqual: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.8.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus 8d3d0c3abe
gnu: r-savr: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-savr): Update to 1.22.0.
2019-05-06 00:14:49 +02:00
Ricardo Wurmus 0aa72f2d1e
gnu: r-destiny: Update to 2.14.0.
* gnu/packages/bioconductor.scm (r-destiny): Update to 2.14.0.
[propagated-inputs]: Remove r-fnn and r-hmisc; add r-ggplot2.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 6fc161fc3e
gnu: r-biocneighbors: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.2.0.
[propagated-inputs]: Add r-biocgenerics and r-rcpphnsw.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus d8771f5fd6
gnu: r-ruvseq: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.18.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 774e499cec
gnu: r-dnabarcodes: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 3649d046a6
gnu: r-inspect: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.14.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 5dce71535f
gnu: r-plgem: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-plgem): Update to 1.56.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 5bf7eb49f6
gnu: r-rots: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.12.0.
2019-05-06 00:14:48 +02:00
Ricardo Wurmus 07252952b7
gnu: r-glimma: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 40f0ee43a0
gnu: r-goseq: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.36.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 7a5d729af1
gnu: r-ctc: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-ctc): Update to 1.58.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 1236ce8e22
gnu: r-genomicinteractions: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 176a264c7c
gnu: r-interactionset: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-interactionset): Update to 1.12.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus eff6b2eb12
gnu: r-riboseqr: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.18.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 7d5acf7a25
gnu: r-riboprofiling: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus 1ddd4af5a0
gnu: r-chipcomp: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chipcomp): Update to 1.14.0.
2019-05-06 00:14:47 +02:00
Ricardo Wurmus c38de81594
gnu: r-bayseq: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.18.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus 4f4bed7de5
gnu: r-qdnaseq: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.20.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus 2317730994
gnu: r-cghcall: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.46.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus 8efb842f11
gnu: r-cghbase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.44.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus bcb95b7aac
gnu: r-marray: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-marray): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus a61bcb28f7
gnu: r-graph: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-graph): Update to 1.62.0.
2019-05-06 00:14:46 +02:00
Ricardo Wurmus 588b63c2af
gnu: r-multtest: Update to 2.40.0.
* gnu/packages/bioconductor.scm (r-multtest): Update to 2.40.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus 0968a44874
gnu: r-ripseeker: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-ripseeker): Update to 1.24.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus 4c221b3bbf
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus e02162f7ba
gnu: r-qvalue: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus 3e1bc88c1f
gnu: r-geneplotter: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.62.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus 4b53d55e98
gnu: r-regioner: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.0.
2019-05-06 00:14:45 +02:00
Ricardo Wurmus 43a23a0733
gnu: r-hpar: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.26.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 0c53332a27
gnu: r-annotate: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.62.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 81a1c45df5
gnu: r-biocgenerics: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.30.0.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 3addf736d5
gnu: r-systempiper: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.18.0.
[propagated-inputs]: Replace r-batchjobs with r-batchtools; add r-yaml.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 9bcbca135b
gnu: r-rsamtools: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.0.
[propagated-inputs]: Add r-rhtslib.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 82d9340b0c
gnu: r-impute: Update to 1.58.0.
* gnu/packages/bioinformatics.scm (r-impute): Update to 1.58.0.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
2019-05-06 00:14:44 +02:00
Ricardo Wurmus 2b4ac1d77e
gnu: r-rcas: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.0.
[propagated-inputs]: Add ghc-pandoc.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus 8322c860f9
gnu: r-methylkit: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.10.0.
[propagated-inputs]: Add r-mgcv.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus b173dbe617
gnu: r-annotationhub: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.16.0.
[propagated-inputs]: Add r-biocfilecache, r-dplyr, and r-rappdirs.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus a8abc8dd3a
gnu: r-fastseg: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.30.0.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus e699e8e599
gnu: r-keggrest: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.24.0.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus c798455d87
gnu: r-gage: Update to 2.34.0.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.34.0.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus d4ef1d59cc
gnu: r-genomicfiles: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.20.0.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus 70a3e4499d
gnu: r-complexheatmap: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.0.0.
[propagated-inputs]: Add r-clue and r-png.
2019-05-06 00:14:43 +02:00
Ricardo Wurmus e2cb23404c
gnu: r-dirichletmultinomial: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.26.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus 0af6efa3c5
gnu: r-ensembldb: Update to 2.8.0.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.8.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus 96f98c5b72
gnu: r-organismdbi: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.26.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus a98c3b4ae4
gnu: r-biovizbase: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.32.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus d38fbacad1
gnu: r-ggbio: Update to 1.32.0.
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.32.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus 623be1a443
gnu: r-gqtlbase: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.16.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus ed7de45655
gnu: r-snpstats: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.34.0.
2019-05-06 00:14:42 +02:00
Ricardo Wurmus 3c5f5b4154
gnu: r-erma: Update to 1.0.0.
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.0.0.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus 89ba9a7226
gnu: r-ldblock: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.14.0.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus a349d57a46
gnu: r-gqtlstats: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.16.0.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus 105d9e2cb4
gnu: r-gviz: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.28.0.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus 1b454f9f69
gnu: r-gwascat: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.16.0.
[propagated-inputs]: Remove r-annotationhub, r-ggbio, r-ggplot2, r-gqtlstats,
r-graph, r-gviz, r-snpstats, r-summarizedexperiment, and r-variantannotation.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus 256609eb46
gnu: r-sushi: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.22.0.
2019-05-06 00:14:41 +02:00
Ricardo Wurmus 7705165882
gnu: r-fithic: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.10.0.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus e998a26e1d
gnu: r-hitc: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.28.0.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus 65925573be
gnu: r-hdf5array: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-rhdf5lib.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus d5625b3a9e
gnu: r-rhdf5lib: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.0.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus 583b4fd6e3
gnu: r-beachmat: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus 029cefdd90
gnu: r-singlecellexperiment: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.6.0.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus 70d04dc183
gnu: r-scater: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.12.0.
[propagated-inputs]: Add r-biocneighbors and r-biocsingular; remove r-plyr,
r-reshape2, and r-rhdf5lib.
2019-05-06 00:14:40 +02:00
Ricardo Wurmus 4540727a21
gnu: r-scran: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.12.0.
[propagated-inputs]: Add r-bh, r-biocsingular, and r-dqrng; remove r-rhdf5lib.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus f2a63d1588
gnu: r-delayedmatrixstats: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.0.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus fbf3494972
gnu: Add r-biocfilecache.
* gnu/packages/bioconductor.scm (r-biocfilecache): New variable.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus fab5f7c8d9
gnu: r-interactivedisplaybase: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.22.0.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus 975b72fa10
gnu: r-edaseq: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.18.0.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus b765fc4a4c
gnu: r-deseq: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.36.0.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus 95f3a46630
gnu: r-aroma-light: Update to 3.14.0.
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.14.0.
2019-05-06 00:14:39 +02:00
Ricardo Wurmus dd03589939
gnu: r-msnid: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus b65c264907
gnu: r-msnbase: Update to 2.10.0.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.10.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus ee386fcb1a
gnu: r-pcamethods: Update to 1.76.0.
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.76.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus f955afdabf
gnu: r-mzid: Update to 1.22.0.
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.22.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus 9421e6b610
gnu: r-vsn: Update to 3.52.0.
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.52.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus 15f240e317
gnu: r-affy: Update to 1.62.0.
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.62.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus fdbaa5c1e5
gnu: r-affyio: Update to 1.54.0.
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.54.0.
2019-05-06 00:14:38 +02:00
Ricardo Wurmus 5498cc46b3
gnu: r-mzr: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.18.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus 24aabd8fd9
gnu: r-protgenerics: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.16.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus 10cb9919fc
gnu: r-sva: Update to 3.32.0.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.32.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus 59bef6eaee
gnu: r-copywriter: Update to 2.16.0.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.16.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus 70c44443c3
gnu: r-chipseq: Update to 1.34.0.
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.34.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus dbb4aa4a34
gnu: r-annotationfilter: Update to 1.8.0.
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.8.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus f6ecdafa11
gnu: r-rhdf5: Update to 2.28.0.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.28.0.
2019-05-06 00:14:37 +02:00
Ricardo Wurmus c030eb50c5
gnu: r-tximport: Update to 1.12.0.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.12.0.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus 5b65a85949
gnu: r-mutationalpatterns: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 1.10.0.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus 45aeb4eb1d
gnu: r-bamsignals: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.16.0.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus 23ce7f3b0b
gnu: r-rhtslib: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.16.1.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus c648e672b7
gnu: r-zlibbioc: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.30.0.
2019-05-06 00:14:36 +02:00
Ricardo Wurmus 3be113b706
gnu: r-motifrg: Update to 1.28.0.
* gnu/packages/bioinformatics.scm (r-motifrg): Update to 1.28.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus a7143246f8
gnu: r-seqlogo: Update to 1.50.0.
* gnu/packages/bioinformatics.scm (r-seqlogo): Update to 1.50.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus 6ef47ac82e
gnu: r-genomation: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.16.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus d726689a70
gnu: r-seqpattern: Update to 1.16.0.
* gnu/packages/bioinformatics.scm (r-seqpattern): Update to 1.16.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus 651b62c697
gnu: r-bsgenome: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.52.0.
2019-05-06 00:14:35 +02:00
Ricardo Wurmus 971df3a784
gnu: r-topgo: Update to 2.36.0.
* gnu/packages/bioinformatics.scm (r-topgo): Update to 2.36.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus d31f8d1bd8
gnu: r-genomicfeatures: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus 40d97367f0
gnu: r-rtracklayer: Update to 1.44.0.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus 6ff6973502
gnu: r-genomicalignments: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.20.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus 8671d1e9d6
gnu: r-summarizedexperiment: Update to 1.14.0.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.0.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus 14561bb9e7
gnu: r-delayedarray: Update to 0.10.0.
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.10.0.
[propagated-inputs]: Add r-matrix.
2019-05-06 00:14:34 +02:00
Ricardo Wurmus d2e165496b
gnu: r-biostrings: Update to 2.52.0.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.52.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus e10b67c797
gnu: r-biocparallel: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus 933571ddcd
gnu: r-biomart: Update to 2.40.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus a1b9378a8e
gnu: r-annotationdbi: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.46.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus 4aadfcd296
gnu: r-biobase: Update to 2.44.0.
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.44.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus b35bc56a8a
gnu: r-genomicranges: Update to 1.36.0.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.0.
2019-05-06 00:14:33 +02:00
Ricardo Wurmus bc0e5bc12e
gnu: r-xvector: Update to 0.24.0.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.24.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 5fadf39280
gnu: r-limma: Update to 3.40.0.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 0d094ad9ab
gnu: r-variantannotation: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.30.0.
[propagated-inputs]: Add r-rhtslib.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 1e3f53a489
gnu: r-edger: Update to 3.26.0.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 6dc05d0a86
gnu: r-genomeinfodb: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.20.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 38142114b7
gnu: r-iranges: Update to 2.18.0.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.18.0.
2019-05-06 00:14:32 +02:00
Ricardo Wurmus 192ddab3e5
gnu: r-s4vectors: Update to 0.22.0.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus 8bdf7d55be
gnu: r-bioccheck: Update to 1.20.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.20.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus e01b72d225
gnu: r-biocstyle: Update to 2.12.0.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.12.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus 440af6482a
gnu: r-biocviews: Update to 1.52.0.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.52.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus ce52cab000
gnu: r-grohmm: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.18.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus 49f30903f0
gnu: r-shortread: Update to 1.42.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.42.0.
2019-05-06 00:14:31 +02:00
Ricardo Wurmus fe40f55094
gnu: r-gostats: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.50.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 4d88dbe6eb
gnu: r-category: Update to 2.50.0.
* gnu/packages/bioinformatics.scm (r-category): Update to 2.50.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 08d2a26d47
gnu: r-gseabase: Update to 1.46.0.
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.46.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus aa51a241c5
gnu: r-rbgl: Update to 1.60.0.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.60.0.
[propagated-inputs]: Add r-bh.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 7f737246d8
gnu: r-annotationforge: Update to 1.26.0.
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.26.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 0a58282de7
gnu: r-dexseq: Update to 1.30.0.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.30.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 9a39193d45
gnu: r-deseq2: Update to 1.24.0.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.24.0.
2019-05-06 00:14:30 +02:00
Ricardo Wurmus 0183163d1e
gnu: r-genefilter: Update to 1.66.0.
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.66.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus 295f35dfb9
gnu: r-preprocesscore: Update to 1.46.0.
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.46.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus 52b4703c08
gnu: r-rgraphviz: Update to 2.28.0.
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.28.0.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus 3b13b6d777
gnu: r-units: Update to 0.6-3.
* gnu/packages/cran.scm (r-units): Update to 0.6-3.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus 3961b3b900
gnu: Add r-dqrng.
* gnu/packages/cran.scm (r-dqrng): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus b8d6dffbdd
gnu: Add r-sitmo.
* gnu/packages/cran.scm (r-sitmo): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus 0c8960df13
gnu: Add r-clue.
* gnu/packages/cran.scm (r-clue): New variable.
2019-05-06 00:14:29 +02:00
Ricardo Wurmus be23c491cb
gnu: Add r-batchtools.
* gnu/packages/cran.scm (r-batchtools): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 04bf86ba9f
gnu: Add r-blme.
* gnu/packages/cran.scm (r-blme): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 2b9d4f5866
gnu: Add r-scrime.
* gnu/packages/cran.scm (r-scrime): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 78735b9f34
gnu: Add r-grimport2.
* gnu/packages/cran.scm (r-grimport2): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 8128189976
gnu: Add r-rcpphnsw.
* gnu/packages/cran.scm (r-rcpphnsw): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 993912905d
gnu: Add r-biocsingular.
* gnu/packages/bioconductor.scm (r-biocsingular): New variable.
2019-05-06 00:14:28 +02:00
Ricardo Wurmus 72032c9d5f
gnu: Add r-base64url.
* gnu/packages/cran.scm (r-base64url): New variable.
2019-05-06 00:14:27 +02:00
Efraim Flashner ba4c0d69b0
gnu: mesa: Update gallium drivers.
* gnu/packages/gl.scm (mesa)[arguments]: Update configure-flags for
aarch64 and armhf for gallium drivers.
2019-05-05 20:34:59 +03:00
Miguel 28b26eca45
installer: Fix typo.
* gnu/installer/newt/menu.scm (run-menu-page): Add missing space after
period.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 17:21:18 +02:00
Brendan Tildesley dcfa0acd7b
Correct email and license info for Brendan Tildesley.
* gnu/packages/audio.scm: Correct email and license info.
* gnu/packages/ebook.scm: Correct email and license info.
* gnu/packages/fonts.scm: Correct email and license info.
* gnu/packages/freedesktop.scm: Correct email and license info.
* gnu/packages/gnome.scm: Correct email and license info.
* gnu/packages/linux.scm: Correct email and license info.
* gnu/packages/lxde.scm: Correct email and license info.
* gnu/packages/python-web.scm: Correct email and license info.
* gnu/packages/python-xyz.scm: Correct email and license info.
* gnu/packages/python.scm: Correct email and license info.
* gnu/packages/video.scm: Correct email and license info.
* gnu/packages/web.scm: Correct email and license info.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 17:16:51 +02:00
Marius Bakke 996186b64d
gnu: lz4: Update to 1.9.1.
* gnu/packages/compression.scm (lz4): Update to 1.9.1.
2019-05-05 15:33:39 +02:00
Danny Milosavljevic ee3ce0d71d
gnu: calibre: Update to 3.42.0.
* gnu/packages/ebook.scm (calibre): Update to 3.42.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley 421c5e92f9
gnu: calibre: Shorten long line.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[build-extra]: Shorten long line.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley d6dfe8b634
gnu: calibre: Install man pages.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[install-man-pages]:
New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley f3f017dbf0
gnu: calibre: Delete various junk from source.
* gnu/packages/ebook.scm (calibre)[source](snippet): Delete various junk from
source.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley 62a97dc0fb
gnu: calibre: Remove libxrender as an input.
* gnu/packages/ebook.scm (calibre)[inputs]: Remove libxrender.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley 68435a7f55
gnu: calibre: Unbundle python2-odfpy.
* gnu/packages/ebook.scm (calibre)[snippet]: Remove all of src/odf.
[inputs]: Add python2-odfpy.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley 7312a7d073
gnu: calibre: Remove some comments.
* gnu/packages/ebook.scm (calibre): There is no unrar in Guix currently, and
  pdftohtml is in poppler, so we can remove this comment.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:21 +02:00
Brendan Tildesley eb5f620134
gnu: calibre: Enable tests.
* gnu/packages/ebook.scm (calibre): Enable tests.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley cbe399e736
gnu: calibre: Disable sqlite test.
* gnu/packages/patches/calibre-remove-test-sqlite.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 4bcd0647b7
gnu: calibre: Disable Qt test.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[configure]: Disable
Qt test.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley f89f5abada
gnu: calibre: Disable bs4 test.
* gnu/packages/patches/calibre-remove-test-bs4.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 6e1ab5fadb
gnu: calibre: Use "linux.py" to install desktop files.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[configure]: Modify.
[install-mimetypes]: Remove.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley ad74978a95
gnu: Add python-soupsieve, python2-soupsieve.
* gnu/packages/python-xyz.scm (python-soupsieve): New variable.
(python2-soupsieve): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley b01cde1ac9
gnu: calibre: Disable tests that require networking.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[configure]: Modify.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 15871b4087
gnu: calibre: Remove unrar test.
* gnu/packages/patches/calibre-remove-test-unrar.patch: New file.
* gnu/packages/ebook.scm (calibre)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley c187c9d786
gnu: python-regex, python2-regex: Update to 2019.04.14.
* gnu/packages/python.scm (python-regex, python2-regex): Update to 2019.04.14.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley adc25b68b1
gnu: calibre: Add python2-html2text as an input.
* gnu/packages/ebook.scm (calibre)[inputs]: Add python2-html2text.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 7a82ceb7bb
gnu: Add python-html2text, python2-html2text.
* gnu/packages/python-web.scm (python-html2text): New variable.
(python2-html2text): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 13068a8ccf
gnu: calibre: Move font unbundling to after check phase.
* gnu/packages/ebook.scm (calibre)[snippet]: Modify.
[native-inputs]: Remove font-liberation.
[inputs]: Add font-liberation.
[arguments]<#:phases>[install-font-liberation]: Delete phase.
[unbundle-font-liberation]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley 4f29902080
gnu: calibre: Add missing dependencies as indicated by tests.
* gnu/packages/ebook.scm (calibre)[inputs]: Add python2-html5lib,
python2-psutil.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:20 +02:00
Brendan Tildesley b0038957f5
gnu: calibre: Build rapydscript.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[build-extra]: Modify.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:19 +02:00
Brendan Tildesley d243b41dd0
gnu: calibre: Use system mathjax.
* gnu/packages/ebook.scm (calibre)[arguments]<#:phases>[build-extra]:
New phase.
[inputs]: Add js-mathjax.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:19 +02:00
Brendan Tildesley 4e6f8a1442
gnu: calibre: Update to 3.41.3.
* gnu/packages/ebook.scm (calibre): Update to 3.41.3.
[inputs]: Replace python2-cssutils by python2-css-parser.
[snippet]: Modify.
* gnu/packages/patches/calibre-use-packaged-feedparser.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-05-05 14:44:19 +02:00
Tobias Geerinckx-Rice c8e214e80d
gnu: wgetpaste: Make all dependencies explicit.
* gnu/packages/wget.scm (wgetpaste)[arguments]: Replace limited
‘use-inputs’ phase with a ‘wrap-program’ one.
2019-05-05 00:10:44 +02:00
Tobias Geerinckx-Rice 4d3990c9f3
gnu: wgetpaste: Return #t from all phases.
* gnu/packages/wget.scm (wgetpaste)[arguments]: Return #t from ‘install’ phase.
2019-05-05 00:10:44 +02:00
Tobias Geerinckx-Rice fbc2531395
gnu: tor: Remove explicit hardening flags.
* gnu/packages/tor.scm (tor)[arguments]: Remove #:configure-flags that
merely confirm the defaults.
2019-05-05 00:10:24 +02:00
Leo Famulari 0d6cfaa3dd
gnu: nano: Update to 4.2.
* gnu/packages/nano.scm (nano): Update to 4.2.
2019-05-04 15:43:22 -04:00
Maxim Cournoyer 4e933afda4
gnu: python-cffi: Fix tests.
Fixes issue #35371 (see: https://bugs.gnu.org/35371).

* gnu/packages/libffi.scm (python-cffi)[phases]
{patch-paths-of-dynamically-loaded-libraries}: Add phase.
[home-page]: Update URL.
2019-05-04 13:52:57 -04:00
Julien Lepiller 8aeef53497
gnu: coq-bignums: Update to 8.9.0.
* gnu/packages/coq.scm (coq-bignums): Update to 8.9.0.
2019-05-04 19:41:44 +02:00
Julien Lepiller f5b0d90490
gnu: coq-mathcomp: Update to 1.8.0.
* gnu/packages/coq.scm (coq-mathcomp): Update to 1.8.0.
2019-05-04 19:41:35 +02:00
Julien Lepiller 1f1ea9c0cb
gnu: coq-gappa: Update to 1.3.4.
* gnu/packages/coq.scm (coq-gappa): Update to 1.3.4.
2019-05-04 19:41:28 +02:00
Julien Lepiller e03e1b5584
gnu: coq: Update to 8.9.0.
* gnu/packages/coq.scm (coq): Update to 8.9.0.
(coq-autosubst): Update to latest commit.
(coq-equations): Update to 1.2-beta2.
2019-05-04 19:41:04 +02:00
Marius Bakke a8bb8fccd8
gnu: harfbuzz: Update source hash.
The previous tarball was modified in-place; see
<https://github.com/harfbuzz/harfbuzz/issues/1641>.

* gnu/packages/gtk.scm (harfbuzz)[source](sha256): Update.
2019-05-04 18:01:12 +02:00
Marius Bakke 57e839a26d
gnu: opus: Update to 1.3.1.
* gnu/packages/xiph.scm (opus): Update to 1.3.1.
2019-05-04 16:53:49 +02:00
Marius Bakke baff6b5e85
gnu: libdrm: Update to 2.4.98.
* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.98.
2019-05-04 16:53:49 +02:00
Marius Bakke 111adbd338
gnu: libpsl: Update to 0.21.0.
* gnu/packages/web.scm (libpsl): Update to 0.21.0.
2019-05-04 16:53:49 +02:00
Marius Bakke 11bab809e1
gnu: python-cython: Update to 0.29.7.
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.7.
2019-05-04 16:53:49 +02:00
Marius Bakke 9adae0a017
gnu: pcre2: Update to 10.33.
* gnu/packages/pcre.scm (pcre2): Update to 10.33.
2019-05-04 16:53:49 +02:00
Marius Bakke 569f53e1a8
gnu: imagemagick: Update to 6.9.10-42.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-42.
2019-05-04 16:53:49 +02:00
Marius Bakke 87d336e20f
gnu: gtk+: Update to 3.24.8.
* gnu/packages/gtk.scm (gtk+): Update to 3.24.8.
[source](snippet): Remove.
2019-05-04 16:53:49 +02:00
Marius Bakke c9c63edbde
gnu: gstreamer: Update to 1.16.0.
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-bad,
gst-plugins-ugly, python-gst): Update to 1.16.0.
(gst-plugins-good): Likewise.
[source](patches): Remove.
[arguments]: Remove #:make-flags.
(gst-libav): Update to 1.16.0.
[inputs]: Change FFMPEG-3.4 to FFMPEG.
* gnu/packages/patches/gst-plugins-good-libvpx-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-05-04 16:53:48 +02:00
Marius Bakke 46c39e1e47
gnu: orc: Update to 0.4.29.
* gnu/packages/gstreamer.scm (orc): Update to 0.4.29.
2019-05-04 16:53:48 +02:00
Marius Bakke 1ce1ebc303
gnu: mesa: Update to 19.0.3.
* gnu/packages/gl.scm (mesa): Update to 19.0.3.
2019-05-04 16:53:48 +02:00
Marius Bakke 420b013724
gnu: libpng: Don't build 'libpng16.a'.
* gnu/packages/image.scm (libpng)[arguments]: Add #:configure-flags.
2019-05-04 16:25:54 +02:00
Marius Bakke 3784b580ef
gnu: QPDF: Update to 8.4.1.
* gnu/packages/pdf.scm (qpdf): Update to 8.4.1.
2019-05-04 16:25:53 +02:00
Marius Bakke ae528aaf19
gnu: perl: Update to 5.28.2.
* gnu/packages/perl.scm (perl): Update to 5.28.2.
2019-05-04 16:25:53 +02:00
Marius Bakke 45a3ad2ea6
gnu: nghttp2: Update to 1.38.0.
* gnu/packages/web.scm (nghttp2): Update to 1.38.0.
2019-05-04 16:25:53 +02:00
Marius Bakke 63432c9647
gnu: SQLite: Update to 3.28.0.
* gnu/packages/sqlite.scm (sqlite): Update to 3.28.0.
2019-05-04 16:25:53 +02:00
Marius Bakke e77412362f
gnu: OpenBLAS: Update to 0.3.6.
* gnu/packages/maths.scm (openblas): Update to 0.3.6.
2019-05-04 16:25:53 +02:00
Marius Bakke 27ed6960be
gnu: icu4c: Update to 64.2.
* gnu/packages/icu4c.scm (icu4c): Update to 64.2.
[native-inputs]: Add PYTHON.
2019-05-04 16:25:52 +02:00
Marius Bakke 3b08c873d8
gnu: fontforge: Update to 20190413.
* gnu/packages/fontutils.scm (fontforge): Update to 20190413.
2019-05-04 16:25:52 +02:00
Marius Bakke de7dae6e10
gnu: CMake: Update to 3.14.3.
* gnu/packages/cmake.scm (cmake-minimal): Update to 3.14.3.
2019-05-04 16:25:52 +02:00
Marius Bakke 176003dafe
gnu: meson: Update to 0.50.1.
* gnu/packages/build-tools.scm (meson): Update to 0.50.1.
2019-05-04 16:25:52 +02:00
Maxim Cournoyer a5e9413ce8
gnu: python: Disable failing test.
Fixes issue #35556 (see: https://bugs.gnu.org/35556).

* gnu/packages/python.scm (python-3.7)[make-flags]: Exclude the test "test_asyncio",
which currently fails.
2019-05-03 23:46:29 -04:00
gabrielhdt 187f9636f1
gnu: ocaml-menhir: Update to 20181113.
* gnu/packages/ocaml.scm (ocaml-menhir): Update to 20181113.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-05-03 20:46:22 +02:00
Sam 52c3cb2687
gnu: Add python-django-extensions.
* gnu/packages/django.scm (python-django-extensions): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-03 17:47:30 +02:00
Sam 8d73558d50
gnu: Add python-django-taggit.
* gnu/packages/django.scm (python-django-taggit): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-05-03 17:47:30 +02:00
Ludovic Courtès 78d6d5e8d9
shepherd: Include /etc/localtime in service containers.
Fixes a bug whereby Tor (for example) would emit syslog messages with a
UTC timestamp instead of local time.

* gnu/build/shepherd.scm (default-mounts): Add /etc/localtime to
MAPPINGS.
2019-05-03 17:47:29 +02:00
Tobias Geerinckx-Rice c8bb86f51c
gnu: tor: Update to 0.4.0.5.
* gnu/packages/tor.scm (tor): Update to 0.4.0.5.
2019-05-03 15:22:22 +02:00
Brendan Tildesley 02eb70bd21
gnu: Add python-css-parser, python2-css-parser.
* gnu/packages/python-web.scm (python-css-parser, python2-css-parser): New
variables.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2019-05-03 13:58:22 +02:00
Brendan Tildesley c2dd07aba5
gnu: web: Change 'l:' prefix to 'license:'.
* gnu/packages/web.scm: Change #:prefix l: to #:prefix license:.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2019-05-03 13:58:21 +02:00
Ludovic Courtès 9d2d9cb14b
installer: Do not sort the guided partition schemes in the selection page.
Previously, the "Everything is one partition" entry would come first in
English but it would be second in French.  This change keeps it the
first choice regardless of the language.

* gnu/installer/newt/partition.scm (run-scheme-page): Pass
 #:sort-listbox-items? to 'run-scheme-page'.
2019-05-03 13:50:49 +02:00
Ludovic Courtès ecb0df6817
installer: Ensure 'packages' field is a superset of '%base-packages'.
Fixes <https://bugs.gnu.org/35541>.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.

* gnu/installer/services.scm (system-services->configuration): Generate
a snippet that appends PACKAGES to %BASE-PACKAGES.
2019-05-03 13:50:49 +02:00
ison 3e85909044
Correct email address for ison.
* .mailmap, gnu/packages/lxde.scm: Update email address.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2019-05-03 08:45:55 +02:00
Ricardo Wurmus d7afe74d60
gnu: r-cluster: Update to 2.0.9.
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.9.
[inputs]: Move gfortran from here...
[native-inputs]: ...to here.
2019-05-03 08:00:54 +02:00
Ricardo Wurmus f66f40400c
gnu: r-irkernel: Update to 1.0.1.
* gnu/packages/cran.scm (r-irkernel): Update to 1.0.1.
2019-05-03 08:00:54 +02:00
Ricardo Wurmus 27b4bfbe4b
gnu: r-ouch: Update to 2.14-1.
* gnu/packages/cran.scm (r-ouch): Update to 2.14-1.
2019-05-03 08:00:53 +02:00
Ricardo Wurmus dea3df2bd1
gnu: r-fs: Update to 1.3.0.
* gnu/packages/cran.scm (r-fs): Update to 1.3.0.
2019-05-03 08:00:49 +02:00
Mark H Weaver 8d5edc9cea
gnu: linux-libre: Update to 5.0.11.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.11.
(%linux-libre-hash): Update hash.
2019-05-02 22:50:01 -04:00
Mark H Weaver c52fb6e11d
gnu: linux-libre@4.19: Update to 4.19.38.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.38.
(%linux-libre-4.19-hash): Update hash.
2019-05-02 22:49:14 -04:00
Mark H Weaver 4dc3f7c7dc
gnu: linux-libre@4.14: Update to 4.14.115.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.115.
(%linux-libre-4.14-hash): Update hash.
2019-05-02 22:48:26 -04:00
Mark H Weaver e2474df6ee
gnu: linux-libre@4.9: Update to 4.9.172.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.172.
2019-05-02 22:47:46 -04:00
Ricardo Wurmus 82329a17f4
gnu: pluma: Use older version of gtksourceview.
Reported by L p R n d n <guix@lprndn.info>.
Fixes <https://bugs.gnu.org/35535>.

* gnu/packages/mate.scm (pluma)[inputs]: Replace gtksourceview with
gtksourceview-3.
2019-05-02 23:12:39 +02:00
Ricardo Wurmus 2f869b0279
gnu: mate-applets: Use older version of gtksourceview.
Reported by L p R n d n <guix@lprndn.info>.

* gnu/packages/mate.scm (mate-applets)[inputs]: Replace gtksourceview with
gtksourceview-3.
2019-05-02 23:12:38 +02:00
宋文武 48f19e60c4
gnu: le-certs: Update hashes.
They added the 3 missing '^M' to all pem certs.

* gnu/packages/certs.scm (le-certs)[inputs]: Update the hashes of
isrgrootx1.pem, letsencryptauthorityx3.pem, letsencryptauthorityx4.pem.
2019-05-02 21:40:41 +08:00
Ludovic Courtès 746ac457cc
Merge branch 'version-1.0.0' 2019-05-02 15:32:30 +02:00
Julien Lepiller c457f109be
gnu: php: Update to 7.3.5.
* gnu/packages/php.scm (php): Update to 7.3.5.
2019-05-02 14:53:23 +02:00
Pierre Neidhardt d5f4d5b683
gnu: emacs-emms: Update to 5.2.
* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 5.2.
2019-05-02 11:54:39 +02:00
Nicolas Goaziou 5f83b5153a
gnu: python-duniterpy: Update to 0.53.1.
* gnu/packages/finance.scm (python-duniterpy): Update to 0.53.1.
2019-05-02 10:22:36 +02:00
Nicolas Goaziou 45a37f5b05
gnu: emacs-relint: Update to 1.7.
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.7.
2019-05-02 10:14:18 +02:00
Nicolas Goaziou d34984b9fe
gnu: emacs-xr: Update to 1.11.
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.11.
2019-05-02 10:13:20 +02:00
Rutger Helling c2974d1e46
gnu: faudio: Update to 19.05.
* gnu/packages/audio.scm (faudio): Update to 19.05.
2019-05-02 08:57:24 +02:00
Tobias Geerinckx-Rice 9bec3ba4ca
gnu: python-flexmock: Update to 0.10.4.
* gnu/packages/check.scm (python-flexmock): Update to 0.10.4.
2019-05-02 00:52:33 +02:00
Marius Bakke 123bba720d
gnu: python-hypothesis: Update to 4.18.3.
* gnu/packages/check.scm (python-hypothesis): Update to 4.18.3.
2019-05-02 00:38:53 +02:00
Marius Bakke 56e95d54d2
gnu: python-pytest: Update to 4.4.1.
* gnu/packages/check.scm (python-pytest): Update to 4.4.1.
[arguments]: Enable previously failing tests.
2019-05-02 00:38:53 +02:00
Marius Bakke f1e9999b5f
gnu: boost: Update to 1.70.0.
* gnu/packages/boost.scm (boost): Update to 1.70.0.
2019-05-02 00:38:53 +02:00
Marius Bakke 0a404bdb5e
gnu: libuv: Update to 1.28.0.
* gnu/packages/libevent.scm (libuv): Update to 1.28.0.
2019-05-02 00:38:53 +02:00
Marius Bakke 3d8f6577bf
gnu: util-linux: Update to 2.33.2.
* gnu/packages/linux.scm (util-linux): Update to 2.33.2.
2019-05-02 00:38:53 +02:00
Marius Bakke 46d258cbe2
gnu: pixman: Update to 0.38.4.
* gnu/packages/xdisorg.scm (pixman): Update to 0.38.4.
2019-05-02 00:38:53 +02:00
Marius Bakke f6e25b3358
gnu: python: Update to 3.7.3.
* gnu/packages/python.scm (python-3.7): Update to 3.7.3.
2019-05-02 00:38:53 +02:00
Marius Bakke 1f62621607
gnu: python-more-itertools: Update to 7.0.0.
* gnu/packages/python-xyz.scm (python-more-itertools): Update to 7.0.0.
2019-05-02 00:38:53 +02:00
Marius Bakke 922fbf8a66
gnu: jemalloc: Update to 5.2.0.
* gnu/packages/jemalloc.scm (jemalloc): Update to 5.2.0.
2019-05-02 00:38:53 +02:00
Marius Bakke 2da9b81837
gnu: harfbuzz: Update to 2.4.0.
* gnu/packages/gtk.scm (harfbuzz): Update to 2.4.0.
2019-05-02 00:38:52 +02:00
Marius Bakke 1ec290e27a
gnu: curl: Update to 7.64.1.
* gnu/packages/curl.scm (curl): Update to 7.64.1.
2019-05-02 00:38:52 +02:00
Marius Bakke 8b5b3acab3
gnu: libpng: Remove graft for 1.6.37.
* gnu/packages/image.scm (libpng): Update to 1.6.37.
[replacement]: Remove field.
(libpng-1.6.37): Remove variable.
2019-05-02 00:38:52 +02:00
Marius Bakke 8de1979d7c
gnu: openjpeg: Don't build 'libopenjp2.a'.
* gnu/packages/image.scm (openjpeg)[arguments]: Add #:configure-flags.
2019-05-02 00:38:52 +02:00
Marius Bakke de1b5e4959
gnu: openjpeg: Incorporate grafted changes.
* gnu/packages/image.scm (openjpeg): Update to 2.3.1.
[replacement]: Remove.
[source]: Change to GIT-FETCH.
2019-05-02 00:38:52 +02:00
Marius Bakke 50943b4878
gnu: lcms: Incorporate grafted changes.
* gnu/packages/ghostscript.scm (lcms)[replacement]: Remove.
[source](patches): New field.
(lcms/fixed): Remove variable.
2019-05-02 00:38:52 +02:00
Marius Bakke c078f1b08b
gnu: texlive-bin: Adapt to Poppler 0.75.
This is a follow-up to commit 2eb92ce85f.

* gnu/packages/patches/texlive-bin-luatex-poppler-compat.patch: Update for
Poppler 0.75.
* gnu/packages/tex.scm (texlive-bin)[source](patches): Update pdftex-poppler-0.75.patch.
[arguments]: Adjust accordingly.
2019-05-02 00:38:52 +02:00
Marius Bakke 3b458d5462
Merge branch 'master' into core-updates 2019-05-01 23:11:41 +02:00
Marius Bakke 14da3daafc
gnu: termite: Update to 15.
* gnu/packages/terminals.scm (termite): Update to 15.
2019-05-01 22:15:02 +02:00
Marius Bakke 03c59a2525
gnu: vte-ng: Update to 0.56.2.a.
* gnu/packages/gnome.scm (vte-ng): Update to 0.56.2.a.
[native-inputs]: Add GCC-7.
[arguments]: Add GCC7 workaround.
2019-05-01 22:15:02 +02:00
Marius Bakke a0d44bb09f
gnu: spice: Update to 0.14.2 [fixes CVE-2019-3813].
* gnu/packages/spice.scm (spice): Update to 0.14.2.
2019-05-01 22:15:01 +02:00
Marius Bakke a550da6247
gnu: spice-protocol: Update to 0.14.0.
* gnu/packages/spice.scm (spice-protocol): Update to 0.14.0.
(spice-protocol-0.12): New public variable.
(spice-gtk)[propagated-inputs]: Change SPICE-PROTOCOL to SPICE-PROTOCOL-0.12.
2019-05-01 22:15:01 +02:00
Marius Bakke 15ada26abb
gnu: signify: Update to 25.
* gnu/packages/crypto.scm (signify): Update to 25.
2019-05-01 22:15:01 +02:00
Marius Bakke a5006ede7f
gnu: signify: Don't use unstable tarball.
* gnu/packages/crypto.scm (signify)[source]: Change to GIT-FETCH.
2019-05-01 22:15:01 +02:00
Marius Bakke f99418e3f3
gnu: ungoogled-chromium: Update to 74.0.3729.131-0.9e33022 [fixes CVE-2019-5824].
* gnu/packages/chromium.scm (%chromium-version): Update to 74.0.3729.131.
(ungoogled-chromium-source): Update Chromium hash.
2019-05-01 22:15:01 +02:00
Marius Bakke ca86b0bae3
gnu: ungoogled-chromium: Unbundle openjpeg again.
This is a follow-up to commit 40594fdcb9e360d68e5444771b5467ba5bbbfcf2.

* gnu/packages/chromium.scm (%preserved-third-party-files): Remove
'third_party/pdfium/third_party/libopenjpeg20'.
(ungoogled-chromium)[arguments]: Fix typo in #:configure-flags.
2019-05-01 22:15:01 +02:00
Julien Lepiller bd9d5dbb86
gnu: php: Disable failing tests on armhf.
* gnu/packages/php.scm (php)[arguments]: Disable two failing tests on
armhf.
2019-05-01 21:13:34 +02:00
Ludovic Courtès 9c941364bf
vm: Build ISOs and VM images in a UTF-8 environment.
Fixes a bug whereby building an image containing non-ASCII file names
would fail due to improper decoding of file names.

* gnu/system/vm.scm (iso9660-image, qemu-image): Set GUIX_LOCPATH and
call 'setlocale' in the build environment.
2019-05-01 21:11:22 +02:00
Ludovic Courtès 17acc215bf
gnu: guix: Update to 326dcbf. 2019-05-01 17:29:02 +02:00
Ludovic Courtès 326dcbf1b3
gnu: guix: Update to 1.0.0. 2019-05-01 14:11:34 +02:00
Ricardo Wurmus ae66feeee0
gnu: r-irkernel: Update to 1.0.0.
* gnu/packages/cran.scm (r-irkernel): Update to 1.0.0.
2019-05-01 11:13:38 +02:00
Ricardo Wurmus 944d4c483a
gnu: r-officer: Update to 0.3.4.
* gnu/packages/cran.scm (r-officer): Update to 0.3.4.
2019-05-01 10:10:04 +02:00
Ricardo Wurmus 0b5b9d69a8
gnu: r-lmtest: Update to 0.9-37.
* gnu/packages/cran.scm (r-lmtest): Update to 0.9-37.
2019-05-01 10:09:52 +02:00
Ricardo Wurmus 8bc8cea987
gnu: r-shinyfiles: Update to 0.7.3.
* gnu/packages/cran.scm (r-shinyfiles): Update to 0.7.3.
2019-05-01 10:09:10 +02:00
Ludovic Courtès 4c13ccbf39
vm-image: Add 'label' field.
* gnu/system/examples/vm-image.tmpl (label): New field.
2019-05-01 09:33:54 +02:00
Marius Bakke af74e4350f
gnu: ungoogled-chromium: Update to 74.0.3729.108-0.9e33022.
* gnu/packages/chromium.scm (%preserved-third-party-files): Add four new
directories, delete three obsolete.
(%chromium-version, %ungoogled-revision, %debian-revision): Update for 74.
(ungoogled-chromium-source): Update hashes.  Ignore Debians GCC6 patches.
(ungoogled-chromium)[arguments]: Add "use_system_openjpeg" to #:configure-flags.
2019-05-01 01:31:31 +02:00
Marius Bakke 947134492e
gnu: Remove greenisland.
* gnu/packages/display-managers.scm (greenisland): Remove variable.
2019-05-01 01:31:31 +02:00
Vagrant Cascadian 4ee55938de
gnu: u-boot-tools: Only run full test suite on x86_64.
* gnu/packages/bootloaders (u-boot-tools)[arguments]<#:phases>[check]:
Modify phase.
[check-x86]: New phase.
[patch]: New phase.
2019-04-30 13:58:37 -07:00
Tobias Geerinckx-Rice 8d2d68a5fb
gnu: ocaml-migrate-parsetree: Name checkout.
* gnu/packages/ocaml.scm (ocaml-migrate-parsetree)[source]: Add FILE-NAME.
2019-04-30 21:07:13 +02:00
Tobias Geerinckx-Rice b7a4cb5206
gnu: ocaml-opam-file-format: Name checkout.
* gnu/packages/ocaml.scm (ocaml-opam-file-format)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice ad09f3b024
gnu: sbcl-cl-syntax: Name checkout.
* gnu/packages/lisp.scm (sbcl-cl-syntax)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice 2af4698016
gnu: emacs-dired-sidebar: Name checkout.
* gnu/packages/emacs-xyz.scm (emacs-dired-sidebar)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice 0abf2d91cf
gnu: sbcl-rfc2388: Name checkout.
* gnu/packages/lisp.scm (sbcl-rfc2388)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice 7026f6b27e
gnu: ocaml-ppx-typerep-conv: Name checkout.
* gnu/packages/ocaml.scm (ocaml-ppx-typerep-conv)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice 3a75925e73
gnu: ocaml-ppx-hash: Name checkout.
* gnu/packages/ocaml.scm (ocaml-ppx-hash)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice 4a6de00217
gnu: ocaml-ppx-enumerate: Name checkout.
* gnu/packages/ocaml.scm (ocaml-ppx-enumerate)[source]: Add FILE-NAME.
2019-04-30 21:07:12 +02:00
Tobias Geerinckx-Rice fbd08d42a6
gnu: ocaml-core: Name checkout.
* gnu/packages/ocaml.scm (ocaml-core)[source]: Add FILE-NAME.
2019-04-30 21:07:11 +02:00
Tobias Geerinckx-Rice 5924f621bb
gnu: sbcl-trivial-backtrace: Name checkout.
* gnu/packages/lisp.scm (sbcl-trivial-backtrace)[source]: Add FILE-NAME.
2019-04-30 21:07:11 +02:00
Tobias Geerinckx-Rice a97fc9cd8e
gnu: sbcl-myway: Name checkout.
* gnu/packages/lisp.scm (sbcl-myway)[source]: Add FILE-NAME.
2019-04-30 21:07:11 +02:00
Tobias Geerinckx-Rice 8f4b57000d
gnu: emacs-helm-pass: Name checkout.
* gnu/packages/emacs-xyz.scm (emacs-helm-pass)[source]: Add FILE-NAME.
2019-04-30 21:07:11 +02:00
Tobias Geerinckx-Rice 2ba3dc0bdf
gnu: emacs-zotxt: Name checkout.
* gnu/packages/emacs-xyz.scm (emacs-zotxt)[source]: Add FILE-NAME.
2019-04-30 21:07:11 +02:00
Vagrant Cascadian 6f5be83cd7
gnu: u-boot-tools: Only run full test suite on x86_64.
* gnu/packages/bootloaders (u-boot-tools)[arguments]<#:phases>[check]:
Modify phase.
[check-x86]: New phase.
[patch]: New phase.
2019-04-30 19:49:16 +02:00
Ludovic Courtès 094aaa1a1e
gnu: gexiv2: Skip failing test on 32-bit platforms.
* gnu/packages/gnome.scm (gexiv2)[arguments]: New field.
2019-04-30 18:29:10 +02:00
Tobias Geerinckx-Rice 9b241d4ce2
gnu: python-nose-timer: Update to 0.7.5.
* gnu/packages/check.scm (python-nose-timer): Update to 0.7.5.
2019-04-30 17:11:52 +02:00
Tobias Geerinckx-Rice e976e199c4
gnu: sbcl-cl+ssl: Name checkout.
* gnu/packages/lisp.scm (sbcl-cl+ssl)[source]: Add FILE-NAME.
2019-04-30 17:11:36 +02:00
Tobias Geerinckx-Rice e76a972bde
gnu: ghc-esqueleto: Name checkout.
* gnu/packages/haskell.scm (ghc-esqueleto)[source]: Add FILE-NAME.
2019-04-30 17:05:22 +02:00
Tobias Geerinckx-Rice 9e6cce4440
gnu: ocaml-ppx-tools: Name checkout.
* gnu/packages/ocaml.scm (ocaml-ppx-tools)[source]: Add FILE-NAME.
2019-04-30 17:04:13 +02:00
Tobias Geerinckx-Rice 45ea12f31e
gnu: sbcl-cl-base64: Name checkout.
* gnu/packages/lisp.scm (sbcl-cl-base64)[source]: Add FILE-NAME.
2019-04-30 17:03:08 +02:00
Tobias Geerinckx-Rice 4fdad3edc3
gnu: eid-mw: Name checkout.
* gnu/packages/security-token.scm (eid-mw)[source]:
Add FILE-NAME.
2019-04-30 17:02:38 +02:00
Ludovic Courtès e4b2866cd0
gnu: libplist: Run tests sequentially.
Fixes <https://bugs.gnu.org/35501>.
Reported by Brendan Tildesley <mail@brendan.scot>.

* gnu/packages/libusb.scm (libplist)[arguments]: New field.
2019-04-30 16:47:29 +02:00
Marius Bakke 5a3d3d6a3b
gnu: Add i3lock.
* gnu/packages/wm.scm (i3lock): New public variable.

(cherry picked from commit b6afc35051)
2019-04-30 15:09:49 +02:00
Tobias Geerinckx-Rice 378b8a6446
gnu: youtube-dl: Update to 2019.04.30.
* gnu/packages/video.scm (youtube-dl): Update to 2019.04.30.
2019-04-30 14:30:18 +02:00
Tobias Geerinckx-Rice eea094ccdc
gnu: ruby-rest-client: Fix lost ,s.
* gnu/packages/ruby.scm (ruby-rest-client)[native-inputs]:
Move unquotes to their operands.
2019-04-30 13:03:56 +02:00
Julien Lepiller b77c8ddbe1
gnu: maven: Update to 3.6.1.
* gnu/packages/maven.scm (maven-artifact): Update to 3.6.1.
2019-04-30 12:41:19 +02:00
Julien Lepiller 6f737ae68f
gnu: java-plexus-archiver: Update to 4.1.0.
* gnu/packages/java.scm (java-plexus-archiver): Update to 4.1.0.
2019-04-30 12:41:11 +02:00
Julien Lepiller 0cd8efcc8c
gnu: java-plexus-utils: Update to 3.2.0.
* gnu/packages/java.scm (java-plexus-utils): Update to 3.2.0.
2019-04-30 12:41:06 +02:00
Ludovic Courtès 92597c3cec
services: colord: Make public and searchable.
* gnu/services/desktop.scm (colord-service-type): Make public.
[description]: New field.
2019-04-30 12:03:02 +02:00
Ludovic Courtès 7614193099
services: bluetooth: Make public and searchable.
Until now 'guix system search bluetooth' would turn up nothing.

* gnu/services/desktop.scm (bluetooth-service-type)
(bluetooth-configuration): Make public.
(bluetooth-service-type)[description]: New field.
2019-04-30 11:59:47 +02:00
Nicolas Goaziou 45fb7b404d
gnu: Rename some games to match upstream project name.
* gnu/packages/games.scm (armagetronad):
(cataclysm-dda):
(abbaye):
(wesnoth):
(wesnoth-server):
(starfighter):
(kiki):
(fillets-ng):
(crawl):
(crawl-tiles):
(tome4):
(btanks):
(battle-tanks):
(edgar): Use these as the package definition.
(armagetron-advanced):
(cataclysm-dark-days-ahead):
(l-abbaye-des-morts):
(the-battle-for-wesnoth):
(the-battle-for-wesnoth-server):
(project-starfighter):
(kiki-the-nano-bot):
(fish-fillets-ng):
(dungeon-crawl-stone-soup):
(dungeon-crawl-stone-soup-tiles):
(tales-of-maj-eyal):
(the-legend-of-edgar): Turn these into obsolete aliases.

This reverts renames made by the following commits:
f95e33a7ad
b1aee9fce2
f6a21d61de
24a67aef2a
36a0b5b48c
8b6e2bc15f
6639295f2f
184f5c8db1
ecdb1348ad
375cb94130
c91ed484d0
973bd8a62c
df42e0f9c9
2019-04-30 10:42:00 +02:00
Julien Lepiller 6215132155
gnu: ocaml-camomile: Install data in the store.
* gnu/packages/ocaml.scm (ocaml-camomile)[arguments]: Fix configuration
to look for and install data in the store.
2019-04-30 10:28:21 +02:00
Timothy Sample f420d639df
gnu: i3-wm: Use absolute paths in session files.
* gnu/packages/wm.scm (i3-wm)[arguments]: Add a phase to patch the
session '.desktop' files to use the absolute paths of the 'i3' and
'i3-with-shmlog' binaries.
2019-04-29 23:04:35 -04:00
Timothy Sample 9aa470e912
gnu: awesome: Use absolute paths in session file.
* gnu/packages/wm.scm (awesome)[arguments]: Add a phase to patch the
session '.desktop' file to use the absolute path of the 'awesome'
binary.
2019-04-29 23:04:35 -04:00
Timothy Sample 5aafccebbe
gnu: gdm: Avoid selecting the placeholder session.
This fixes <https://bugs.gnu.org/35484>.

* gnu/packages/gnome.scm (gdm)[arguments]: Modify the pre-configure phase to
patch GDM to only select the placeholder session if there are no others.
2019-04-29 23:04:27 -04:00
Timothy Sample aa7cdc57dc
gnu: i3-wm: Use absolute paths in session files.
* gnu/packages/wm.scm (i3-wm)[arguments]: Add a phase to patch the
session '.desktop' files to use the absolute paths of the 'i3' and
'i3-with-shmlog' binaries.
2019-04-29 22:36:27 -04:00
Timothy Sample 4ec42524dd
gnu: awesome: Use absolute paths in session file.
* gnu/packages/wm.scm (awesome)[arguments]: Add a phase to patch the
session '.desktop' file to use the absolute path of the 'awesome'
binary.
2019-04-29 20:54:43 -04:00
Timothy Sample e8c6e771c1
gnu: gdm: Avoid selecting the placeholder session.
This fixes <https://bugs.gnu.org/35484>.

* gnu/packages/gnome.scm (gdm)[arguments]: Modify the pre-configure phase to
patch GDM to only select the placeholder session if there are no others.
2019-04-29 20:54:43 -04:00
Nicolas Goaziou 649220adae
gnu: Rename some games to match upstream project name.
* gnu/packages/games.scm (armagetronad):
(cataclysm-dda):
(abbaye):
(wesnoth):
(wesnoth-server):
(starfighter):
(kiki):
(fillets-ng):
(crawl):
(crawl-tiles):
(tome4):
(btanks):
(battle-tanks):
(edgar): Use these as the package definition.
(armagetron-advanced):
(cataclysm-dark-days-ahead):
(l-abbaye-des-morts):
(the-battle-for-wesnoth):
(the-battle-for-wesnoth-server):
(project-starfighter):
(kiki-the-nano-bot):
(fish-fillets-ng):
(dungeon-crawl-stone-soup):
(dungeon-crawl-stone-soup-tiles):
(tales-of-maj-eyal):
(the-legend-of-edgar): Turn these into obsolete aliases.

This reverts renames made by the following commits:
f95e33a7ad
b1aee9fce2
f6a21d61de
24a67aef2a
36a0b5b48c
8b6e2bc15f
6639295f2f
184f5c8db1
ecdb1348ad
375cb94130
c91ed484d0
973bd8a62c
df42e0f9c9
2019-04-30 02:02:39 +02:00
Ricardo Wurmus 6f7f8543c5
gnu: r-rcpparmadillo: Update to 0.9.400.2.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.400.2.0.
2019-04-30 00:33:55 +02:00
Ricardo Wurmus 8b96b86065
gnu: r-repr: Update to 1.0.0.
* gnu/packages/cran.scm (r-repr): Update to 1.0.0.
[propagated-inputs]: Add r-pillar.
2019-04-30 00:33:55 +02:00
Ricardo Wurmus 5fce90135c
gnu: r-ipred: Update to 0.9-9.
* gnu/packages/cran.scm (r-ipred): Update to 0.9-9.
2019-04-30 00:33:55 +02:00
Christopher Baines 0534427551
vm: Pass -smp to QEMU to allow use of multiple cores.
* gnu/build/vm.scm (load-in-linux-vm): Pass (parallel-job-count) to QEMU with
-smp to allow using multiple cores.
2019-04-29 21:11:38 +01:00
Marius Bakke b6afc35051
gnu: Add i3lock.
* gnu/packages/wm.scm (i3lock): New public variable.
2019-04-29 20:10:43 +02:00
Marius Bakke 05e1534ee8
gnu: kodi: Update to 18.2.
* gnu/packages/kodi.scm (kodi): Update to 18.2.
* gnu/packages/patches/kodi-set-libcurl-ssl-parameters.patch: Adjust for
upstream changes.
2019-04-29 20:10:43 +02:00
Marius Bakke 06c86f166d
gnu: msmtp: Update to 1.8.4.
* gnu/packages/mail.scm (msmtp): Update to 1.8.4.
2019-04-29 20:10:43 +02:00
Marius Bakke b339f14cb2
gnu: elogind: Update to 241.3.
* gnu/packages/freedesktop.scm (elogind): Update to 241.3.
2019-04-29 20:10:42 +02:00
Marius Bakke 2e652add1f
gnu: ftgl: Don't build libftgl.a.
* gnu/packages/gl.scm (ftgl)[arguments]: Add "--disable-static" to #:configure-flags.
2019-04-29 20:10:42 +02:00
Marius Bakke a1570c89fe
gnu: qemu: Build verbosely.
* gnu/packages/virtualization.scm (qemu)[arguments]: Remove phase
'make-gtester-verbose' in favor of #:make-flags.
2019-04-29 20:10:42 +02:00
Ricardo Wurmus 4267481a4e
gnu: Remove scmutils.
Fixes <https://bugs.gnu.org/34203>.

* gnu/packages/scheme.scm (scmutils): Remove variable.
2019-04-29 17:20:44 +02:00
Julien Lepiller 373a2a0797
gnu: ocaml-yojson: Update to 1.7.0.
* gnu/packages/ocaml.scm (ocaml-yojson): Update to 1.7.0.
(ocaml-merlin): Use jbuild to prevent a build failure due to a
deprecation warning.
2019-04-29 15:44:14 +02:00
Nicolas Goaziou fdd9ab3721
gnu: Add missing module in games.scm. 2019-04-29 15:08:59 +02:00
Nicolas Goaziou 1abe2e2a29
gnu: Add missing modules in games.scm. 2019-04-29 14:56:32 +02:00
Nicolas Goaziou a3d4a631fe
gnu: Add hedgewars.
* gnu/packages/games.scm (hedgewars): New variable.
2019-04-29 14:37:58 +02:00
Nicolas Goaziou e8a0696d56
gnu: Add jumpnbump.
* gnu/packages/games.scm (jumpnbump): New variable.
2019-04-29 14:37:01 +02:00
Nicolas Goaziou 1a8984536f
gnu: Add sdl2-net.
* gnu/packages/sdl.scm (sdl2-net): New variable.
2019-04-29 14:37:01 +02:00
Vagrant Cascadian 6b99afeef8
gnu: u-boot: Update to 2019.04.
* gnu/packages/bootloaders.scm (u-boot): Update to 2019.04.
[source]: Add patch.
(u-boot-novena): Update dynamic patch to handle config key rename.
(u-boot-am335x-evm): New variable.
(u-boot-am335x-boneblack): Build with modified am335x-evm config.
(u-boot-novena): Fix typo in description.
* gnu/bootloader/u-boot.scm (u-boot-beaglebone-black-bootloader): Use
u-boot-am335x-boneblack.
* gnu/packages/patches/u-boot-fix-mkimage-header-verification.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-29 12:35:04 +02:00
rendaw 9d3053819d
file-systems: Support the 'no-atime' flag.
* guix/build/syscalls.scm (MS_NOATIME): New variable.
* gnu/build/file-systems.scm (mount-flags->bit-mask): Support it.
* doc/guix.texi (File Systems): Document it and add cross-references to
the relevant documentation.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-04-29 12:19:03 +02:00
Ludovic Courtès 4c89dc354e
gnu: font-public-sans: Adjust synopsis and description.
* gnu/packages/fonts.scm (font-public-sans)[synopsis, description]:
Adjust.
2019-04-29 09:53:06 +02:00
Jens M 245aa0e344
gnu: Add font-public-sans.
* gnu/packages/fonts.scm (font-public-sans): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-29 09:51:41 +02:00
Meiyo Peng 772bcb1cf0
installer: Fix typo in docstring.
* gnu/installer/newt/wifi.scm (draw-scanning-page): Fix typo in docstring.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-29 09:48:40 +02:00
Vagrant Cascadian c31bec88a8
gnu: diffoscope: Update to 114.
* gnu/packages/package-management (diffoscope): Update to 114.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-29 09:33:55 +02:00
Diego Nicola Barbato b901b72545
services: slim: Honor the value of slim from slim-configuration.
Previously setting the slim field in slim-configuration would have no effect.

* gnu/services/xorg.scm (slim-shepherd-service): Remove unused let binding for
  slim.  Use (slim-configuration-slim config) instead of the default slim.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-04-29 09:33:55 +02:00
Christopher Baines fdb513a704
gnu: Fix missing bison package in (gnu packages algebra).
This fixes a regression introduced in
6d3896b9fc.

* gnu/packages/algebra.scm: Use the (gnu packages bison) module.
2019-04-28 23:58:13 +01:00
Christopher Baines 81aa6c721b
gnu: direnv: Change to the go-build-system.
The go-build-system is slightly more appropriate, and switching resolves an
issue with combining the 'unpack phase from the gnu-build-system, and the
'setup-go-environment from the go-build-system. With both of those phases
creating a directory, the first-subdirectory call at the end of the 'unpack
phase can return different values depending on the filesystem ordering.

* gnu/packages/shellutils.scm (direnv)[source]: Use the git repository, as
this works better with the go-build-system.
[build-system]: Change to the go-build-system.
[arguments]: Adjust for the go-build-system.
[native-inputs]: Remove go.
2019-04-28 23:13:31 +01:00
Ludovic Courtès d779de1817
installer: Tell the user where the config file is.
* gnu/installer/newt/final.scm (strip-prefix): New procedure.
(run-config-display-page): Add a sentence showing where the config file
is stored.
2019-04-28 22:57:08 +02:00
Ludovic Courtès ada4aeb068
installer: Fix handling of user password mismatches.
Previously, if we had a password mismatch, the 'password' field would
end up containing a <user> record instead of the actual password.

* gnu/installer/newt/user.scm (confirm-password): Make TRY-AGAIN
optional and adjust docstring.
(run-user-add-page): Move 'confirm-password' call one level higher.
2019-04-28 22:57:07 +02:00
Ludovic Courtès 0e8e963d73
installer: User accounts can now have a "real name."
* gnu/installer/newt/user.scm (run-user-add-page): Add #:real-name.  Add
a label and entry for the real name and initialize the 'real-name' field
of the <user> record.
* gnu/installer/final.scm (create-user-database): Set the 'comment'
field of the <user-account> record.
2019-04-28 22:57:07 +02:00
Ludovic Courtès 43c1c44a11
installer: User can have a "real name".
* gnu/installer/user.scm (<user>)[real-name]: New field.
(users->configuration)[use->sexp]: Turn it into a 'comment' field.
2019-04-28 22:57:07 +02:00
Ludovic Courtès ed5a5d38cf
installer: Improve layout of the partitioning page.
Previously the "listbox" would be unnecessarily high, leaving too little
space for the German translation of the text above.

* gnu/installer/newt/partition.scm (run-disk-page): Increase
 #:info-textbox-width and pass #:listbox-height.
2019-04-28 22:57:07 +02:00
Ludovic Courtès 113bc08172
installer: Add 'nss-certs' to the networking services.
Fixes <https://bugs.gnu.org/35469>.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.

* gnu/installer/services.scm (%system-services): Add service for
'nss-certs', with 'recommended?' set to #t.
2019-04-28 22:57:07 +02:00
Ludovic Courtès 1d9fcdacf9
installer: Recommended services are pre-selected.
* gnu/installer/services.scm (<system-service>)[recommended?]: New
field.
* gnu/installer/newt/services.scm (run-desktop-environments-cbt-page):
Pass #:selection to 'run-checkbox-tree-page', computed from the
'recommended?' field of each service.
(run-networking-cbt-page): Likewise.
2019-04-28 22:57:07 +02:00
Ludovic Courtès 7253c2b629
installer: Add #:selection parameter to 'run-checkbox-tree-page'.
* gnu/installer/newt/page.scm (%none-selected): New variable.
(run-checkbox-tree-page): Add #:selection.
[fill-checkbox-tree]: Honor it.
2019-04-28 22:57:07 +02:00
Ludovic Courtès a4ae05fb8b
vm-image: Add 'nss-certs' to the global package set.
* gnu/system/examples/vm-image.tmpl (packages): Add NSS-CERTS.
2019-04-28 22:57:06 +02:00
Nicolas Goaziou e0f3a4feb5
gnu: Fix typo.
* gnu/packages/algebra.scm (giac-xcas): Fix typo.
2019-04-28 22:16:03 +02:00
Nicolas Goaziou 7fc0e3dbbb
gnu: giac-xcas: Rename to "giac" to match upstream name.
* gnu/packages/algebra.scm (giac): New variable.
(giac-xcas): Deprecate.
2019-04-28 21:41:57 +02:00
Nicolas Goaziou 6d3896b9fc
gnu: giac-xcas: Add inputs.
* gnu/packages/algebra.scm (giac-xcas)[inputs]: Add glpk, libsamplerate, bison
  and flex.
2019-04-28 21:35:39 +02:00
Nicolas Goaziou 9f73ac242c
gnu: giac-xcas: Fix documentation.
* gnu/packages/algebra.scm (giac-xcas): Use a single output.  Fix licensing
  issues in documentation.

Xcas expects documentation to be located at a fixed location, not compatible
with a "doc" output.
2019-04-28 21:35:37 +02:00
Mark H Weaver 0e09c099cb
gnu: linux-libre: Update to 5.0.10.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.10.
(%linux-libre-hash): Update hash.
2019-04-28 13:35:43 -04:00
Mark H Weaver e9ef345508
gnu: linux-libre@4.19: Update to 4.19.37.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.37.
(%linux-libre-4.19-hash): Update hash.
2019-04-28 13:34:57 -04:00
Mark H Weaver 4943ddf878
gnu: linux-libre@4.14: Update to 4.14.114.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.114.
(%linux-libre-4.14-hash): Update hash.
2019-04-28 13:34:06 -04:00
Mark H Weaver a7dad69a32
gnu: linux-libre@4.9: Update to 4.9.171.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.171.
2019-04-28 13:33:36 -04:00
Mark H Weaver 4987e2b3b1
gnu: linux-libre@4.4: Update to 4.4.179.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.179.
2019-04-28 13:32:54 -04:00
Christopher Baines bf949323b9
gnu: Add cloud-utils.
* gnu/packages/admin.scm (cloud-utils): New variable.
2019-04-28 17:37:17 +01:00
Ricardo Wurmus cee06123c8
gnu: Remove unused module reference.
* gnu/services/web.scm: Remove reference to (gnu packages guile).
2019-04-28 16:05:57 +02:00
Ricardo Wurmus 6b1c7ac8ed
gnu: hypre: Unconditionally return #T from build phases.
* gnu/packages/maths.scm (hypre)[arguments]: Use INVOKE and unconditionally
return #T from build phases.
2019-04-28 16:05:57 +02:00
Ricardo Wurmus 9cd82b1c9d
gnu: jacal: Unconditionally return #T from configure phase.
* gnu/packages/maths.scm (jacal)[arguments]: Use INVOKE in configure phase.
2019-04-28 16:05:57 +02:00
Ricardo Wurmus 32d5360f43
gnu: z3: Unconditionally return #T from build phases.
* gnu/packages/maths.scm (z3)[arguments]: Use INVOKE in build phases.
2019-04-28 16:05:56 +02:00
Ricardo Wurmus cb6f44d4e4
gnu: atlas: Always return #T from build phases.
* gnu/packages/maths.scm (atlas)[arguments]: Always return #T from build
phases; use INVOKE.
2019-04-28 16:05:56 +02:00
Ricardo Wurmus 1ec1782106
gnu: make-blis: Always return #T from configure phase.
* gnu/packages/maths.scm (make-blis)[arguments]: Use INVOKE.
2019-04-28 16:05:56 +02:00
Ricardo Wurmus 7055407770
gnu: kdevplatform: Use INVOKE.
* gnu/packages/kde.scm (kdevplatform)[arguments]: Use INVOKE and return #T
unconditionally.
2019-04-28 16:05:53 +02:00
Ludovic Courtès 7d62fa206b
Merge branch 'staging' 2019-04-28 14:45:35 +02:00
Ricardo Wurmus c5db31d414
gnu: gnome-shell: Add gdk-pixbuf+svg to inputs.
* gnu/packages/gnome.scm (gnome-shell)[inputs]: Add gdk-pixbuf+svg.
2019-04-27 22:57:03 +02:00
Ricardo Wurmus 3153ca9d5f
gnu: r-rhtslib: Fix build.
* gnu/packages/bioinformatics.scm (r-rhtslib)[arguments]: Add
"--no-staged-install" to configure flags.
2019-04-27 22:45:02 +02:00
Ricardo Wurmus fc3ebc3023
gnu: r-ggbio: Fix build.
* gnu/packages/bioinformatics.scm (r-ggbio)[arguments]: Add build phase to
patch out typo.
2019-04-27 20:45:21 +02:00
Ricardo Wurmus d22d790409
gnu: r-sjplot: Update to 2.6.3.
* gnu/packages/cran.scm (r-sjplot): Update to 2.6.3.
[propagated-inputs]: Add r-bayestestr, r-insight, and r-performance.
2019-04-27 20:45:20 +02:00
Ricardo Wurmus 711a2f0611
gnu: Add r-performance.
* gnu/packages/cran.scm (r-performance): New variable.
2019-04-27 20:45:20 +02:00
Ricardo Wurmus c4568c5c64
gnu: Add r-bayestestr.
* gnu/packages/cran.scm (r-bayestestr): New variable.
2019-04-27 20:45:20 +02:00
Ludovic Courtès 7dbdbbfd6e
installer: Add missing i18n in the partitioning pages.
* gnu/installer/newt/partition.scm (run-scheme-page): Add missing 'G_'
for ITEMS.
(run-partioning-page): Likewise.
(run-partition-page): Move misplaced call to 'G_'.
2019-04-27 19:31:50 +02:00
Ludovic Courtès 61e41d5132
gnu: guix: Update to 0c329bf.
* gnu/packages/package-management.scm (guix): Update to 0c329bf.
2019-04-27 19:31:50 +02:00
Julien Lepiller e821a6406a
gnu: ocaml-qtest: Update to 2.9.
* gnu/packages/ocaml.scm (ocaml-qtest): Update to 2.9.
[source]: Use git-fetch.
[build-system]: Use dune-build-system.
2019-04-27 19:03:43 +02:00
Julien Lepiller bcc718be03
gnu: ocaml-ezjsonm: Update to 1.1.0.
* gnu/packages/ocaml.scm (ocaml-ezjsonm): Update to 1.1.0.
2019-04-27 19:03:28 +02:00
Julien Lepiller 58c3118f59
gnu: ocaml-re: Update to 1.9.0.
* gnu/packages/ocaml.scm (ocaml-re): Update to 1.9.0.
(ocaml-uri): Fix build.
2019-04-27 19:03:25 +02:00
Julien Lepiller e58d05c32e
gnu: ocaml-csv: Update to 2.2.
* gnu/packages/ocaml.scm (ocaml-csv): Update to 2.2.
[source]: Use git-fetch.
[build-system]: Use dune-build-system.
2019-04-27 19:03:21 +02:00
Julien Lepiller f9caa17b63
gnu: ocaml-spawn: Update to 0.13.0.
* gnu/packages/ocaml.scm (ocaml-spawn): Update to 0.13.0.
2019-04-27 19:03:14 +02:00
Julien Lepiller b8e2bd4fc8
gnu: knot: Fix typos.
* gnu/services/dns.scm: Fix typos.
2019-04-27 15:56:35 +02:00
Ludovic Courtès ef1f1ca742
gnu: bubblewrap: Fix Texinfo markup in description.
Fixes a regression introduced in
7ecd1761a2.

* gnu/packages/virtualization.scm (bubblewrap): Fix typo.
2019-04-27 15:41:36 +02:00
Ludovic Courtès 6e0521eeed
vm-image: Allow for password-less sudo.
* gnu/system/examples/vm-image.tmpl (sudoers-file): New field.
2019-04-27 15:08:18 +02:00
Ludovic Courtès ff587e0fc0
vm-image: Mention 'info guix' in the MOTD.
* gnu/system/examples/vm-image.tmpl (vm-image-motd): Mention 'info guix'.
2019-04-27 15:08:18 +02:00
Ludovic Courtès 5df29aad3b
vm-image: Add a font to the global profile.
* gnu/system/examples/vm-image.tmpl (packages): Add FONT-BITSTREAM-VERA,
for use by xfce-terminal, IceCat, etc.
2019-04-27 15:08:17 +02:00
Ludovic Courtès ea2acfe98a
doc: Update bit about SSH in the VM.
* doc/guix.texi (Running Guix in a VM): Remove mentions of 'lsh-server';
mention 'openssh-service-type' and add a cross-reference.
* gnu/system/examples/vm-image.tmpl (services): Add a commented-out line
for 'openssh-service-type'.
2019-04-27 15:08:17 +02:00
Julien Lepiller 6cd7b1be7e
gnu: knot: Add configuration fields.
* gnu/services/dns.scm (knot-zone-configuration)[zonefile-load]
[journal-content, max-journal-usage, max-journal-depth, max-zone-size]:
New fields.
(knot-zone-config): Serialize them.
* doc/guix.texi (DNS Services): Document them.
2019-04-27 13:02:31 +02:00
Clément Lassieur bdb372a647
gnu: gajim: Update to 1.1.3.
* gnu/packages/messaging.scm (gajim): Update to 1.1.3.
2019-04-27 12:07:50 +02:00
Clément Lassieur bf98373fcd
gnu: python-nbxmpp: Update to 0.6.10.
* gnu/packages/messaging.scm (python-nbxmpp): Update to 0.6.10.
2019-04-27 12:07:50 +02:00
Ricardo Wurmus ea9d634c7e
gnu: r-quadprog: Update to 1.5-6.
* gnu/packages/maths.scm (r-quadprog): Update to 1.5-6.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus bea8205936
gnu: r-caret: Update to 6.0-84.
* gnu/packages/statistics.scm (r-caret): Update to 6.0-84.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 0d32caeeed
gnu: r-fpc: Update to 2.1-11.2.
* gnu/packages/statistics.scm (r-fpc): Update to 2.1-11.2.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 9fbbe2623f
gnu: r-rngtools: Update to 1.3.1.1.
* gnu/packages/statistics.scm (r-rngtools): Update to 1.3.1.1.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus a563e75ea4
gnu: r-mass: Update to 7.3-51.4.
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.4.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus aa97fbfa95
gnu: r-boot: Update to 1.3-22.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-22.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 071390aa09
gnu: r-sf: Update to 0.7-4.
* gnu/packages/cran.scm (r-sf): Update to 0.7-4.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 1bbfca18c5
gnu: r-classint: Update to 0.3-3.
* gnu/packages/cran.scm (r-classint): Update to 0.3-3.
[propagated-inputs]: Add r-kernsmooth.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 7b18fac45b
gnu: r-survey: Update to 3.36.
* gnu/packages/cran.scm (r-survey): Update to 3.36.
[propagated-inputs]: Add r-mitools.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 779174e4bb
gnu: r-ordinal: Update to 2019.4-25.
* gnu/packages/cran.scm (r-ordinal): Update to 2019.4-25.
2019-04-27 12:03:13 +02:00
Ricardo Wurmus 9c4f118bf7
gnu: Add r-mitools.
* gnu/packages/cran.scm (r-mitools): New variable.
2019-04-27 12:03:10 +02:00
Clément Lassieur 747c8f2a20
gnu: mozjs-38: Fix URI.
* gnu/packages/gnuzilla.scm (mozjs-38): Fix URI.
2019-04-27 11:59:49 +02:00
Rutger Helling 816014d39d
gnu: wine-staging: Update to 4.7.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.7.
* gnu/packages/wine.scm (wine-staging): Update to 4.7.
2019-04-27 11:33:23 +02:00
Ludovic Courtès 435551f0fa
services: knot: Fix configuration file generation.
Fixes a regression introduced in
92eb600f8a.

* gnu/services/dns.scm (knot-config-file): Add ungexp around call to
'knot-configuration-includes'.
2019-04-27 00:19:41 +02:00
Ludovic Courtès aea1a42e00
system: Add boot file systems to /etc/fstab.
* gnu/system.scm (essential-services): Pass FSTAB-SERVICE-TYPE the list
of file systems that match 'file-system-needed-for-boot?'.
2019-04-27 00:11:52 +02:00
Ludovic Courtès 74685a4369
services: file-system: Filter what goes to /etc/fstab.
Fixes a longstanding issue whereby, due to our long fstab that included
pseudo file systems like cgroup mounts, graphical file managers would
display all of these.  Initially reported at
<https://lists.gnu.org/archive/html/help-guix/2017-11/msg00084.html>.

* gnu/services/base.scm (file-system-fstab-entries): New procedure.
(file-system-service-type): Use it to extend FSTAB-SERVICE-TYPE.
2019-04-27 00:11:52 +02:00
Julien Lepiller b05290380f
gnu: ocaml-ppxlib: Update to 0.6.0.
* gnu/packages/ocaml.scm (ocaml-ppxlib): Update to 0.6.0.
(dune): Update to 1.9.1.
2019-04-26 23:57:00 +02:00
Julien Lepiller cf338cc305
gnu: ocaml-migrate-parsetree: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-migrate-parsetree)[properties]: New
field.
2019-04-26 23:35:24 +02:00
Julien Lepiller b7ebcb043c
gnu: ocaml-ppx-expect: Update to 0.12.0.
* gnu/packages/ocaml.scm (ocaml-ppx-inline-test): Update to 0.12.0.
(ocaml-ppx-expect): Update to 0.12.0.
2019-04-26 23:35:19 +02:00
Julien Lepiller ee33e415e7
gnu: ocaml-frontc: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-frontc)[properties]: New field.
2019-04-26 23:35:17 +02:00
Julien Lepiller d4857001a1
gnu: ocaml-ppx-tools: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-ppx-tools)[properties]: New field.
2019-04-26 23:35:15 +02:00
Julien Lepiller f08b235dab
gnu: ocaml-lwt-log: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-lwt-log)[properties]: New field.
2019-04-26 23:35:13 +02:00
Julien Lepiller c949a4eb1f
gnu: ocaml-ppx-tools-versioned: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-ppx-tools-versioned)[properties]: New
field.
2019-04-26 23:35:11 +02:00
Julien Lepiller d9faae6254
gnu: ocaml-compiler-libs: Add upstream name.
* gnu/packages/ocaml.scm (ocaml-compiler-libs)[properties]: New field.
2019-04-26 23:35:08 +02:00
Julien Lepiller 1e5937c8c0
gnu: ocaml-ppx-derivers: Update to 1.2.1.
* gnu/packages/ocaml.scm (ocaml-ppx-derivers): Update to 1.2.1.
2019-04-26 23:35:03 +02:00
Julien Lepiller 1e8439de27
gnu: ocaml-pcre: Update to 7.4.1.
* gnu/packages/ocaml.scm (ocaml-pcre): Update to 7.4.1.
[build-system]: Use dune-build-system.
[source]: Use git-fetch.
2019-04-26 23:34:59 +02:00
Julien Lepiller acb98ad956
gnu: ocaml-stringext: Update to 1.5.0.
* gnu/packages/ocaml.scm (ocaml-stringext): Update to 1.5.0.
[source]: Use git-fetch.
[build-system]: Use dune-build-system.
2019-04-26 23:34:54 +02:00
Julien Lepiller 09cd92a983
gnu: ocaml-zarith: Update to 1.7.
* gnu/packages/ocaml.scm (ocaml-zarith): Update to 1.7.
[source]: Use git-fetch.
2019-04-26 23:34:41 +02:00
Julien Lepiller eddfd11d70
gnu: ocaml-topkg: Update to 1.0.0.
* gnu/packages/ocaml.scm (ocaml-topkg): Update to 1.0.0.
2019-04-26 23:34:31 +02:00
Julien Lepiller 853af25ecd
gnu: ocaml-mtime: Update to 1.1.0.
* gnu/packages/ocaml.scm (ocaml-mtime): Update to 1.1.0.
2019-04-26 23:34:26 +02:00
Julien Lepiller 3f59ecfcb5
gnu: ocaml-qcheck: Update to 0.9.
* gnu/packages/ocaml.scm (ocaml-qcheck): Update to 0.9.
2019-04-26 23:34:10 +02:00
Ricardo Wurmus 152cbc3ca5
gnu: r-with-tests: Update to 3.6.0.
* gnu/packages/statistics.scm (r-with-tests): Update to 3.6.0.
[arguments]: Adjust "build-reproducibly" phase.
[native-inputs]: Add a texlive-union consisting of texlive-fonts-amsfonts,
texlive-fonts-ec, texlive-latex-amsfonts, texlive-latex-base,
texlive-latex-fancyvrb, texlive-latex-graphics, texlive-latex-hyperref,
texlive-latex-oberdiek, texlive-latex-tools, texlive-latex-upquote, and
texlive-latex-url.
2019-04-26 21:00:41 +02:00
Ricardo Wurmus 7f55904558
gnu: Add umi-tools.
* gnu/packages/bioinformatics.scm (umi-tools): New variable.
2019-04-26 21:00:37 +02:00
Timothy Sample 8caa458953
gnu: gdm: Install a placeholder desktop entry.
This fixes <https://bugs.gnu.org/35068>.

* gnu/packages/gnome.scm (gdm)[arguments]: Add a phase that installs a
placeholder desktop entry file.

Co-authored-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-04-26 13:57:39 -04:00
Leo Famulari 8597aecb84
gnu: MPD: Update to 0.21.8.
* gnu/packages/mpd.scm (mpd): Update to 0.21.8.
2019-04-26 13:36:59 -04:00
Nicolas Goaziou 936a4f4371
gnu: mame: Update to 0.209.
* gnu/packages/emulators.scm (mame): Update to 0.209.
2019-04-26 18:54:16 +02:00
Julien Lepiller e379d1b5ef
gnu: dns: Fix configuration formating.
* gnu/services/dns.scm (format-string-list): Fix formating of lists with
only one symbol.
2019-04-26 18:37:48 +02:00
Julien Lepiller 273ba2552b
gnu: ocaml-integers: Update to 0.3.0.
* gnu/packages/ocaml.scm (ocaml-integers): Update to 0.3.0.
2019-04-26 18:29:02 +02:00
Julien Lepiller 12c3f62ab2
gnu: ocaml-easy-format: Update to 1.3.1.
* gnu/packages/ocaml.scm (ocaml-easy-format): Update to 1.3.1.
[build-system]: Use dune-build-system.
[source]: Use git-fetch.
2019-04-26 18:28:58 +02:00
Julien Lepiller 7e49538483
gnu: ocaml-fpath: Update to 0.7.2.
* gnu/packages/ocaml.scm (ocaml-fpath): Update to 0.7.2.
2019-04-26 18:28:54 +02:00
Julien Lepiller b858c5ac39
gnu: ocaml-ssl: Update to 0.5.7.
* gnu/packages/ocaml.scm (ocaml-ssl): Update to 0.5.7.
2019-04-26 18:28:49 +02:00
Julien Lepiller 44b8507d5e
gnu: ocaml-octavius: Update to 1.2.1.
* gnu/packages/ocaml.scm (ocaml-octavius): Update to 1.2.1.
2019-04-26 18:28:46 +02:00
Julien Lepiller 22cd6a1d4f
gnu: ocaml-result: Update to 1.3.
* gnu/packages/ocaml.scm (ocaml-result): Update to 1.3.
[build-system]: Use dune-build-system.
[source]: Use git-fetch.
2019-04-26 18:28:42 +02:00
Julien Lepiller 5cb40adaa2
gnu: ocaml-utop: Update to 2.3.0.
* gnu/packages/ocaml.scm (ocaml-utop): Update to 2.3.0.
2019-04-26 18:28:25 +02:00
Ludovic Courtès d7b05620a9
vm-image: Remove NetworkManager & co. and add the DHCP client.
* gnu/system/examples/vm-image.tmpl (services): Remove wpa-supplicant,
cups-pk-helper, and NetworkManager.  Add DHCP-CLIENT-SERVICE-TYPE.
2019-04-26 18:24:55 +02:00
Ludovic Courtès a9a0790376
gnu: xfdesktop: Stick a Guix logo in the background image.
* gnu/packages/xfce.scm (xfdesktop)[source](modules, snippet): New
fields.
[arguments]: New field.
[native-inputs]: Add INKSCAPE and IMAGEMAGICK.
2019-04-26 18:23:56 +02:00
Ludovic Courtès 94e1439800
services: cups-pk-helper: Export.
* gnu/services/desktop.scm (cups-pk-helper-service-type): Export.
2019-04-26 18:07:46 +02:00
Ludovic Courtès 1ac6c33cae
vm-image: Use the actual file name of the current file.
* gnu/system/examples/vm-image.tmpl (this-file): Use 'basename' and
'current-source-location'.
2019-04-26 16:47:11 +02:00
Ludovic Courtès 98f035482f
installer: Actually reboot when the user presses "Reboot."
* gnu/installer/newt/final.scm (run-install-success-page): Return
'success.
* gnu/installer.scm (installer-program): Check the result of the 'final
step and reboot upon success.
2019-04-26 14:19:36 +02:00
Ludovic Courtès 9529f7850e
installer: Take 'guix system init' exit code into account.
This allows the installer to distinguish success from failure, and also
ensures the shell that runs 'guix system init' exits upon completion.

* gnu/installer/utils.scm (run-shell-command)[pause]: New procedure.
Add "exec" before COMMAND in the script.  Guard 'invoke' call and handle
'invoke-error?'.  Add call to 'pause' on completion.
* gnu/installer/final.scm (install-system): Remove 'false-if-exception'.
2019-04-26 14:19:36 +02:00
Ludovic Courtès 6c849cdb98
installer: Run wrapped program with 'execl', not 'system'.
'system' invokes /bin/sh, which is certainly not needed here.

* gnu/installer.scm (installer-program): Use 'execl', not 'system'.
2019-04-26 14:19:36 +02:00
Ludovic Courtès 538b99f31f
system: Provide a new VM image configuration.
* gnu/system/examples/vm-image.tmpl: Rewrite.
* doc/guix.texi (Running Guix in a VM): Adjust accordingly.
2019-04-26 14:19:36 +02:00
Ludovic Courtès 504a0fc636
accounts: Always honor the configured user account shell.
Starting from commit 0ae735bcc8, Guix
System would preserve the user shell across reconfigure and reboot.
This was done so as to allow for the use of 'chsh'.

This proved to be a misguided decision.  This commit goes back to
considering user shells as config and not "state."

* gnu/build/accounts.scm (allocate-passwd): Do not use shell from
PREVIOUS.
2019-04-26 14:19:36 +02:00
Tobias Geerinckx-Rice 7342923d98
gnu: wgetpaste: Add and use wget input.
This package has but one purpose; late binding's overkill.

* gnu/packages/wget.scm (wgetpaste)[arguments]: Add ‘use-inputs’ phase.
[inputs]: Add wget.
2019-04-26 04:36:02 +02:00
Tobias Geerinckx-Rice 4f7db08571
gnu: hcxdumptool: Update to 5.1.4.
* gnu/packages/networking.scm (hcxdumptool): Update to 5.1.4.
2019-04-26 00:58:16 +02:00
Tobias Geerinckx-Rice 03c443ce8f
gnu: hcxtools: Update to 5.1.4.
* gnu/packages/networking.scm (hcxtools): Update to 5.1.4.
2019-04-26 00:58:06 +02:00
Tobias Geerinckx-Rice 55036ddc9a
gnu: soundtouch: Update to 2.1.1.
* gnu/packages/audio.scm (soundtouch): Update to 2.1.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME.
Remove patches.
* gnu/packages/patches/soundtouch-CVE-2018-1000223.patch,
gnu/packages/patches/soundtouch-CVE-2018-14044-14045.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-04-26 00:56:32 +02:00
Tobias Geerinckx-Rice 88507036f6
gnu: tmux-xpanes: Update to 4.1.0.
* gnu/packages/tmux.scm (tmux-xpanes): Update to 4.1.0.
2019-04-26 00:54:00 +02:00
Arun Isaac 9be92490b5
gnu: librepcb: Update to 0.1.1.
* gnu/packages/engineering.scm (librepcb): Update to 0.1.1.
2019-04-26 01:58:30 +05:30
Julien Lepiller 92eb600f8a
gnu: knot-service: Add includes field in configuration.
* gnu/services/dns.scm (knot-configuration): Add includes field.
(verify-knot-configuration): Check includes content.
(knot-config-file): Serialize includes.
* doc/guix.texi (DNS Services): Document it.
2019-04-25 21:44:55 +02:00
Leo Famulari ca3cf2d58e
gnu: tmux: Update to 2.9.
* gnu/packages/tmux.scm (tmux): Update to 2.9.
2019-04-25 13:57:09 -04:00
Julien Lepiller b68aff1f05
gnu: certbot: Add support for manual plugin.
* gnu/services/certbot.scm (certificate-configuration): Add challenge,
auth-hook and cleanup-hook fields.
(certbot-command): Use them.
* doc/guix.texi (Certificate Services): Document them.
2019-04-25 19:46:18 +02:00
Julien Lepiller c3634df2a4
gnu: ocaml@4.02: Remove the package, affected by a CVE, and its dependent
packages.

This fixes <https://bugs.gnu.org/27462>.

* gnu/packages/ocaml.scm (ocaml-4.02, camlp4-4.02, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit)
(ocaml4.02-camlzip, ocaml4.02-ocamlmod, ocaml4.02-zarith)
(ocaml4.02-qcheck, ocaml4.02-qtest, ocaml4.02-stringext)
(ocaml4.02-bisect, ocaml4.02-bitstring, ocaml4.02-result)
(ocaml4.02-topkg, ocaml4.02-rresult, ocaml4.02-sqlite3, ocaml4.02-csv)
(ocaml4.02-mtime, ocaml4.02-cmdliner, ocaml4.02-fmt, ocaml4.02-astring)
(ocaml4.02-alcotest, ocaml4.02-ppx-tools, ocaml4.02-react, ocaml4.02-ssl)
(ocaml4.02-lwt, ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath)
(ocaml4.02-bos, ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar)
(ocaml4.02-uutf, ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64)
(ocaml4.02-omake, ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-bin-prot, ocaml4.02-fieldslib)
(ocaml4.02-ppx-core, ocaml4.02-ppx-optcomp, ocaml4.02-ppx-driver)
(ocaml4.02-cppo, ocaml4.02-ppx-deriving, ocaml4.02-ppx-type-conv)
(ocaml4.02-ppx-inline-test, ocaml4.02-ppx-bench, ocaml4.02-ppx-compare)
(ocaml4.02-sexplib, ocaml4.02-typerep, ocaml4.02-variantslib)
(ocaml4.02-ppx-sexp-conv, ocaml4.02-ppx-variants-conv)
(ocaml4.02-ppx-here, ocaml4.02-ppx-assert, ocaml4.02-ppx-enumerate)
(ocaml4.02-ppx-let, ocaml4.02-ppx-typerep-conv, ocaml4.02-ppx-sexp-value)
(ocaml4.02-ppx-pipebang, ocaml4.02-ppx-bin-prot, ocaml4.02-ppx-fail)
(ocaml4.02-ppx-custom-printf, ocaml4.02-ppx-sexp-message)
(ocaml4.02-ppx-fields-conv, ocaml4.02-seq, ocaml4.02-re)
(ocaml4.02-ppx-expect, ocaml4.02-ppx-jane, ocaml4.02-core-kernel)
(ocaml4.02-async-kernel, ocaml4.02-async-rpc-kernel, ocaml4.02-core)
(ocaml4.02-async-unix, ocaml4.02-async-extra, ocaml4.02-async)
(ocaml4.02-ocplib-endian, ocaml4.02-easy-format, optcomp)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): Remove variables.
* guix/build-system/ocaml.scm (default-ocaml4.02)
(default-ocaml4.02-findlib, package-with-ocaml4.02)
(strip-ocaml4.02-variant): Remove variables.
2019-04-25 19:01:31 +02:00
Julien Lepiller 6e49426761
gnu: ocamlify: Downgrade to 0.0.1.
Version 0.0.2 cannot be built with the latest OCaml, whereas this
version does.  This is also the version used by opam.

* gnu/packages/ocaml.scm (ocamlify): Downgrade to 0.0.1.
[arguments]: Do not use ocaml-4.02.
2019-04-25 19:01:05 +02:00
Julien Lepiller 0705f389d1
gnu: Remove ocaml-jbuilder.
Jbuilder is deprecated and replaced by dune.

* gnu/packages/ocaml.scm (ocaml-jbuilder): Remove variable.
(ocaml-zed, ocaml-utop): Use dune-build-system.
2019-04-25 19:00:48 +02:00
Julien Lepiller bbe9915b30
gnu: bap: Update to 1.6.0.
* gnu/packages/ocaml.scm (bap): Update to 1.6.0.
(ocaml-frontc): Update to 3.4.1.
(ocaml-fileutils, ocaml-cstruct, ocaml-hex, ocaml-ezjsonm, ocaml-uri):
New variables.
(ocaml4.02-fileutils, ocaml4.02-cstruct, ocaml4.02-hex,
ocaml4.02-ezjsonm, ocaml4.02-uri): Remove variables.
2019-04-25 19:00:25 +02:00
Julien Lepiller ce9a30e6f4
gnu: Add ocaml-bigarray-compat.
* gnu/packages/ocaml.scm (ocaml-bigarray-compat): New variable.
2019-04-25 18:59:55 +02:00
Ricardo Wurmus cd8dce8ac4
gnu: gnome-shell: Add gdk-pixbuf+svg to inputs.
Fixes <https://bugs.gnu.org/34124>.

* gnu/packages/gnome.scm (gnome-shell)[inputs]: Add gdk-pixbuf+svg.
[arguments]: Add the lib directory of gdk-pixbuf+svg to the LD_LIBRARY_PATH
wrapper of the gnome-shell executable.
2019-04-25 15:30:07 +02:00
Nicolas Goaziou 92e1e0ec4b
gnu: fltk: Update to 1.3.5.
* gnu/packages/fltk.scm (fltk): Update to 1.3.5.
2019-04-25 14:59:16 +02:00
Ludovic Courtès 187122b902
installer: Ask for confirmation of the user passwords.
* gnu/installer/newt/user.scm (run-user-add-page): Add #:name and
 #:home-directory and honor them.  Add call to 'confirm-password'.
2019-04-25 12:23:54 +02:00
Ludovic Courtès 8f2b7e3cb4
installer: Ask for confirmation of the root password.
* gnu/installer/newt/user.scm (confirm-password): New procedure.
(run-root-password-page): Add call to 'confirm-password'.
2019-04-25 12:23:54 +02:00
Ludovic Courtès 453c976501
installer: Use FLAG-PASSWORD for the encryption passphrase confirmation.
* gnu/installer/newt/partition.scm (prompt-luks-passwords)
<password-confirm-page>: Pass #:input-flags to 'run-input-page'.
2019-04-25 12:23:54 +02:00
Chris Marusich 4728806185
gnu: Add python-yubikey-manager and python2-yubikey-manager.
* gnu/packages/security-token.scm (python-yubikey-manager)
(python2-yubikey-manager): New variables.
2019-04-24 21:08:39 -07:00
Chris Marusich 5297e97599
gnu: Add python-fido2 and python2-fido2.
* gnu/packages/security-token.scm (python-fido2, python2-fido2): New
variables.
2019-04-24 21:08:39 -07:00
Chris Marusich 41553c90e4
gnu: Add public-suffix-list.
* gnu/packages/dns.scm (public-suffix-list): New variable.
2019-04-24 21:08:39 -07:00
Chris Marusich 5f7d151c77
gnu: Add libu2f-host.
* gnu/packages/security-token.scm (libu2f-host): New variable.
2019-04-24 21:08:39 -07:00
Chris Marusich 404037f83d
gnu: Add python-pyscard and python2-pyscard.
* gnu/packages/security-token.scm (python-pyscard, python2-pyscard): New
variables.
2019-04-24 21:08:38 -07:00
Chris Marusich 968e86bd93
gnu: Add python-pyfakefs and python2-pyfakefs.
* gnu/packages/patches/python-pyfakefs-remove-bad-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add the patch.
* gnu/packages/check.scm (python-pyfakefs, python2-pyfakefs): New
  variables.
2019-04-24 21:08:36 -07:00
Tobias Geerinckx-Rice 0406434baa
gnu: bind: Update to 9.12.4-P1 [fixes CVE-2018-5743, CVE-2019-6467].
* gnu/packages/dns.scm (isc-bind): Update to 9.12.4-P1.
[source]: Add patch.
[inputs]: Add python and python-ply.
* packages/patches/bind-fix-unused-pk11-ecc-constants.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-25 04:42:17 +02:00
Tobias Geerinckx-Rice 9b19734c50
gnu: r-yamss: Fix typo in description.
* gnu/packages/bioconductor.scm (r-yamss)[description]: Fix typo.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice 61985d650b
gnu: python-dill: Fix typo in description.
* gnu/packages/python-xyz.scm (python-dill)[description]: Fix typo.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice 52beae7b8a
gnu, guix: Yearly ritual purging of the filesystems.
* gnu/packages/android.scm (android-ext4-utils)[synopsis]: Fix ‘file
system’ spelling.
* gnu/packages/disk.scm (rmlint)[synopsis, description]: Likewise.
* gnu/packages/golang.scm (go-github-com-kr-fs)[synopsis, description]:
Likewise & edit for grammar.
* gnu/packages/ipfs.scm (gx, go-ipfs)[description]: Likewise.
* /gnu/packages/java.scm (java-commons-vfs)[synopsis]: Likewise.
* gnu/packages/linux.scm (fuseiso)[description]: Likewise.
(genext2fs)[synopsis, description]: Likewise.
* gnu/packages/package-management.scm (libostree)[description]: Likewise.
* gnu/packages/python-xyz.scm (python-requests-file)[description]:
Likewise & mark up.
* gnu/packages/rails.scm (ruby-with-advisory-lock)[description]:
Likewise.
* gnu/packages/ruby.scm (ruby-rerun)[description]: Likewise.
* guix/build/go-build-system.scm (setup-go-environment)<docstring>:
Likewise.
* guix/store/deduplication.scm (get-temp-link)<docstring>: Likewise.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice 7ecd1761a2
gnu: bubblewrap: Edit description.
* gnu/packages/virtualization.scm (bubblewrap)[description]: Mark up & edit.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice ac32a451fa
gnu: perl-filesys-notify-simple: Edit description.
* gnu/packages/perl.scm (perl-filesys-notify-simple)[description]: Mark up & edit.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice ddfd529cc9
gnu: libimobiledevice: Edit description.
* gnu/packages/libusb.scm (libimobiledevice)[description]: Fix grammar & spelling.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice 2cffa2f240
gnu: libsvm: Update to 3.23.
* gnu/packages/machine-learning.scm (libsvm): Update to 3.23.
2019-04-25 04:42:16 +02:00
Tobias Geerinckx-Rice 5ed720976a
gnu: openfst: Update to 1.7.2.
* gnu/packages/machine-learning.scm (openfst): Update to 1.7.2.
2019-04-25 04:42:16 +02:00
Ludovic Courtès ecb33b87aa
vm: Adjust FAT serial number code to 32-bit Guile.
On 32-bit systems, 'string-hash' would raise an out-of-range exception
when the second argument was 2^32.

* gnu/build/vm.scm (make-iso9660-image): Pass 2^32 - 1 to 'string-hash'.
2019-04-25 00:45:35 +02:00
Ludovic Courtès e7c7b73320
installer: Preserve order of user accounts.
* gnu/installer/newt/user.scm (run-user-page): Add call to 'reverse'.
2019-04-25 00:45:35 +02:00
Ludovic Courtès 5be7aecd14
vm: 'system-disk-image' no longer requires the OS to define the "/" file system.
Previously 'guix system disk-image' would fail if the OS didn't define a
"/" file system, even though it actually overrides that file system.

* gnu/system/vm.scm (system-disk-image)[root-uuid]: Turn into a
procedure.
Call 'root-uuid' on a variant of OS with a "/" file system and inherit
from that.
2019-04-25 00:45:35 +02:00
Ludovic Courtès 91a7c4998f
installer: Ask for the root account password.
Fixes <https://bugs.gnu.org/35399>.

* gnu/installer/newt/user.scm (run-root-password-page): New procedure.
* gnu/installer/user.scm (users->configuration): Filter out the "root"
account.
* gnu/installer/final.scm (create-user-database): Set 'uid' field in
'user-account' form.
2019-04-25 00:45:35 +02:00
Ludovic Courtès 399c31d40a
installer: 'run-input-page' has a new #:input-flags parameter.
* gnu/installer/newt/page.scm (run-input-page): Add #:input-flags and
honor it.
2019-04-25 00:45:35 +02:00
Ludovic Courtès 898677ed17
installer: Ask for user password and initialize /etc/shadow.
Partly fixes <https://bugs.gnu.org/35399>.

* gnu/installer/user.scm (<user>)[password]: New field.
* gnu/installer/final.scm (%seed): New variable.
(integer->alphanumeric-char, random-string)
(create-user-database): New procedures.
(install-system): Call 'create-user-database'.
* gnu/installer/newt/final.scm (run-install-shell): Add #:users and pass
it to 'install-system'.
(run-final-page): Pass #:users to 'run-install-shell'.
* gnu/installer/newt/user.scm (run-user-add-page): Add password entry.
Pass its result as the 'password' field of <user>.
2019-04-25 00:45:34 +02:00
Ludovic Courtès 3cc033f2a8
installer: Add missing 'G_' for networking message.
* gnu/installer/newt/network.scm (wait-technology-powered): Add missing
'G_'.
2019-04-25 00:45:34 +02:00
Ludovic Courtès 01ac0e6be1
system: Add guile-readline and guile-colorized to %BASE-PACKAGES.
This adds pretty much nothing to the system closure size.

* gnu/system.scm (%base-packages): Add GUILE-READLINE and
GUILE-COLORIZED.
2019-04-25 00:45:34 +02:00
Ludovic Courtès 55111549e8
install: Add node name in Castellano.
* gnu/system/install.scm (%installation-node-names): Add "es".
2019-04-25 00:45:34 +02:00
Danny Milosavljevic 9374cbd1fb
services: fprintd: Provide polkit policy.
* gnu/services/authentication.scm (fprintd-service-type)[extensions]: Add
polkit-service-type.
2019-04-24 22:21:35 +02:00
Ricardo Wurmus 190dc09e95
gnu: r-xtable: Update to 1.8-4.
* gnu/packages/statistics.scm (r-xtable): Update to 1.8-4.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus 3a9991e4dd
gnu: r-dbplyr: Update to 1.4.0.
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.4.0.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus 3cc8f66e95
gnu: r-testthat: Update to 2.1.1.
* gnu/packages/statistics.scm (r-testthat): Update to 2.1.1.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus a300ab685a
gnu: r-igraph: Update to 1.2.4.1.
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.1.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus 8fc6188e4f
gnu: r-pamr: Update to 1.56.1.
* gnu/packages/cran.scm (r-pamr): Update to 1.56.1.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus a059791f4e
gnu: r-ggforce: Update to 0.2.2.
* gnu/packages/cran.scm (r-ggforce): Update to 0.2.2.
2019-04-24 17:04:54 +02:00
Ricardo Wurmus 88a39cc6f5
gnu: r-rms: Update to 5.1-3.1.
* gnu/packages/cran.scm (r-rms): Update to 5.1-3.1.
2019-04-24 17:04:53 +02:00
Ricardo Wurmus f1c1bbc1a6
gnu: r-genetics: Update to 1.3.8.1.2.
* gnu/packages/cran.scm (r-genetics): Update to 1.3.8.1.2.
2019-04-24 17:04:53 +02:00
Ricardo Wurmus 378b5f4d1e
gnu: r-fields: Update to 9.7.
* gnu/packages/cran.scm (r-fields): Update to 9.7.
2019-04-24 17:04:53 +02:00
Ricardo Wurmus 90325bb182
gnu: r-splitstackshape: Update to 1.4.8.
* gnu/packages/cran.scm (r-splitstackshape): Update to 1.4.8.
2019-04-24 17:04:53 +02:00
Ricardo Wurmus d6fc8fe1fa
gnu: r-emmeans: Update to 1.3.4.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.4.
2019-04-24 17:04:53 +02:00
Ricardo Wurmus 902905cc5b
gnu: r-sys: Update to 3.2.
* gnu/packages/cran.scm (r-sys): Update to 3.2.
2019-04-24 17:04:48 +02:00
Tobias Geerinckx-Rice 5f88d81fa4
gnu: zynaddsubfx: Update to 3.0.5.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.5.
2019-04-24 15:02:05 +02:00
Tobias Geerinckx-Rice cda12aa949
gnu: padthv1: Update to 0.9.7.
* gnu/packages/music.scm (padthv1): Update to 0.9.7.
2019-04-24 14:56:08 +02:00
Tobias Geerinckx-Rice b19392f4f4
gnu: samplv1: Update to 0.9.7.
* gnu/packages/music.scm (samplv1): Update to 0.9.7.
2019-04-24 14:55:59 +02:00
Tobias Geerinckx-Rice e39c4800f0
gnu: synthv1: Update to 0.9.7.
* gnu/packages/music.scm (synthv1): Update to 0.9.7.
2019-04-24 14:55:53 +02:00
Tobias Geerinckx-Rice e4ea33cb2a
gnu: drumkv1: Update to 0.9.7.
* gnu/packages/music.scm (drumkv1): Update to 0.9.7.
2019-04-24 14:47:03 +02:00
Tobias Geerinckx-Rice 5e4ac4de79
gnu: pdfpc: Update to 4.3.2.
* gnu/packages/pdf.scm (pdfpc): Update to 4.3.2.
2019-04-24 14:26:02 +02:00
Tobias Geerinckx-Rice 21e67d060b
gnu: gphoto2: Update to 2.5.20.
* gnu/packages/photo.scm (gphoto2): Update to 2.5.20.
2019-04-24 14:09:02 +02:00
Tobias Geerinckx-Rice e48c3dd990
gnu: rawtherapee: Update to 5.6.
* gnu/packages/photo.scm (rawtherapee): Update to 5.6.
[inputs]: Add librsvg.
2019-04-24 13:48:02 +02:00
Tobias Geerinckx-Rice a50452508e
gnu: youtube-dl: Update to 2019.04.24.
* gnu/packages/video.scm (youtube-dl): Update to 2019.04.24.
2019-04-24 13:05:02 +02:00
Pierre Neidhardt 1c0dd73092
gnu: emacs-ledger-mode: Use ledger as input.
* gnu/packages/finance.scm (emacs-ledger-mode)[inputs]: Add ledger.
[arguments]: Patch path to ledger executable.
2019-04-24 11:12:02 +02:00
Tobias Geerinckx-Rice 28341601b3
gnu: xl2tpd: Don't use NAME in source URI.
* gnu/packages/vpn.scm (xl2tpd)[source]: Hard-code NAME.
2019-04-24 01:47:48 +02:00
Tobias Geerinckx-Rice 14ccd8f883
gnu: xl2tpd: Update to 1.3.14.
* gnu/packages/vpn.scm (xl2tpd): Update to 1.3.14.
2019-04-24 01:47:48 +02:00
Tobias Geerinckx-Rice 7067d5f654
gnu: ristretto: Don't use NAME in source URI.
* gnu/packages/xfce.scm (ristretto)[source]: Hard-code NAME.
2019-04-24 01:47:48 +02:00
Tobias Geerinckx-Rice 177d1af038
gnu: ristretto: Update to 0.8.4.
* gnu/packages/xfce.scm (ristretto): Update to 0.8.4.
2019-04-24 01:47:48 +02:00
Tobias Geerinckx-Rice b990f986f4
gnu: inxi-minimal: Update to 3.0.33-1.
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.33-1.
2019-04-24 01:47:48 +02:00
Nicolas Goaziou ca983a2fc1
gnu: python2-sh: Fix build.
* gnu/packages/python-xyz.scm (python-sh): Fix build error with Python 2 due
  to failing tests.
2019-04-24 00:47:23 +02:00
Ludovic Courtès 06e5c3af8b
services: connman: Redirect output to a log file.
* gnu/services/networking.scm (connman-shepherd-service): Pass
 #:log-file to 'make-forkexec-constructor'.
2019-04-23 23:44:36 +02:00
Marius Bakke 37da4fbe15
Merge branch 'master' into staging 2019-04-23 19:43:59 +02:00
Marius Bakke e01bd1a674
gnu: libseccomp: Update to 2.4.1.
* gnu/packages/linux.scm (libseccomp): Update to 2.4.1.
2019-04-23 19:39:03 +02:00
Marius Bakke af1d777e6c
gnu: maim: Update to 5.5.3.
* gnu/packages/xdisorg.scm (maim): Update to 5.5.3.
2019-04-23 19:39:03 +02:00
Marius Bakke 8949b64004
gnu: fluidsynth: Update to 2.0.5.
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.5.
2019-04-23 19:39:03 +02:00
Marius Bakke a18581a02d
gnu: libpng: Replace with 1.6.37 [security fixes].
This fixes CVE-2018-14048, CVE-2018-14550, and CVE-2019-7317.

* gnu/packages/image.scm (libpng)[replacement]: New field.
(libpng-1.6.37): New public variable.
2019-04-23 19:39:03 +02:00
Marius Bakke 30023aa670
gnu: xf86-video-intel: Update to 2.99.917-13.6afed33.
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-13.6afed33.
2019-04-23 19:39:02 +02:00
Arun Isaac 9694b44e3b
gnu: notmuch-addrlookup-c: Update to 9.
* gnu/packages/mail.scm (notmuch-addrlookup-c): Update to 9.
[arguments]: Remove PREFIX from #:make-flags.
2019-04-23 22:06:45 +05:30
Tobias Geerinckx-Rice 74ee98eed4
gnu: ocaml-ppx-hash: Fix typo in description.
* gnu/packages/ocaml.scm (ocaml-ppx-hash)[description]:
Fix non-functional typo.
2019-04-23 18:14:49 +02:00
Tobias Geerinckx-Rice 97f4ff6d29
gnu: libedit: Update to 20190324-3.1.
* gnu/packages/libedit.scm (libedit): Update to 20190324-3.1.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice ef93b55e42
gnu: lynis: Update to 2.7.4.
* gnu/packages/admin.scm (lynis): Update to 2.7.4.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice 7b7abb07c2
gnu: libmwaw: Don't use NAME in source URI.
* gnu/packages/libreoffice.scm (libmwaw)[source]: Hard-code NAME.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice 9148ed7cd2
gnu: libodfgen: Don't use NAME in source URI.
* gnu/packages/libreoffice.scm (libodfgen)[source]: Hard-code NAME.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice 9a4f6ceb10
gnu: libvisio: Don't use NAME in source URI.
* gnu/packages/libreoffice.scm (libvisio)[source]: Hard-code NAME.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice cb4c99ceb9
gnu: libpagemaker: Don't use NAME in source URI.
* gnu/packages/libreoffice.scm (libpagemaker)[source]: Hard-code NAME.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice 44aaf1e00a
gnu: libmwaw: Update to 0.3.15.
* gnu/packages/libreoffice.scm (libmwaw): Update to 0.3.15.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice be59c48d15
gnu: perceptualdiff: Don't use unstable tarball.
It's still broken by freeimage, unfortunately.

* gnu/packages/image.scm (perceptualdiff)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-04-23 18:13:05 +02:00
Tobias Geerinckx-Rice 645b6c7fc7
gnu: gifsicle: Use HTTPS.
* gnu/packages/image.scm (gifsicle)[source, home-page]: Use HTTPS.
2019-04-23 18:13:04 +02:00
Tobias Geerinckx-Rice 5c46e1dda8
gnu: gifsicle: Update to 1.92.
* gnu/packages/image.scm (gifsicle): Update to 1.92.
2019-04-23 18:13:04 +02:00
Ludovic Courtès 86b8869fff
linux-container: Remove '%containerized-shepherd-service' hack.
This hack worked around a defect in the Shepherd 0.5.0 and is no longer
needed.

* gnu/services/shepherd.scm (%containerized-shepherd-service): Remove.
* gnu/system/linux-container.scm (container-essential-services): Don't
use it.
2019-04-23 16:38:12 +02:00
Ludovic Courtès 051b279fd0
services: account: Make 'user-homes' a one-shot service.
* gnu/system/shadow.scm (account-shepherd-service): Add 'one-shot?'
field.  Return #t from 'start'.
2019-04-23 16:38:12 +02:00
Ludovic Courtès 95ef8b85b1
services: shepherd: Support one-shot services.
* gnu/services/shepherd.scm (<shepherd-service>)[one-shot?]: New field.
(shepherd-service-file): Pass #:one-shot? to the <service> constructor.
* doc/guix.texi (Shepherd Services): Document it.
2019-04-23 16:38:11 +02:00
Ludovic Courtès 9fb1ca0808
gnu: shepherd: Update to 0.6.0.
* gnu/packages/admin.scm (shepherd): Update to 0.6.0.  Use
"mirror://gnu" as the URL base.
[properties]: Remove.
2019-04-23 16:38:11 +02:00
Rutger Helling 93c5c6d164
gnu: spirv-headers: Update to 1.3.7.
* gnu/packages/vulkan.scm (spirv-headers): Update to 1.3.7.
2019-04-23 11:03:56 +02:00
Rutger Helling b2e417f3f1
gnu: glslang: Update to 7.11.3188.
* gnu/packages/vulkan.scm (glslang): Update to 7.11.3188.
2019-04-23 11:03:56 +02:00
Pierre Neidhardt 83126aa8a9
gnu: emacs-disk-usage: Update to 1.3.3.
* gnu/packages/emacs-xyz.scm (emacs-disk-usage): Update to 1.3.3.
2019-04-23 10:43:54 +02:00
Ludovic Courtès 519177ad41
install: Pass "quiet" to the kernel.
This is a followup to 5582aa8e31.

* gnu/system/install.scm (installation-os)[kernel-arguments]: Add "quiet".
2019-04-23 00:40:50 +02:00
Ludovic Courtès 7611074f67
installer: Run 'guix system init' with the right locale.
* gnu/installer/utils.scm (run-shell-command): Add #:locale and honor it.
* gnu/installer/newt/final.scm (run-install-shell): Add 'locale'
parameter; pass it to 'install-system'.
(run-final-page): Obtain locale from RESULT; pass it to 'run-install-shell'.
* gnu/installer/final.scm (install-system): Add 'locale' parameter; pass
it to 'run-shell-command'.
2019-04-23 00:34:47 +02:00
Christopher Baines 5582aa8e31
system: Change default kernel-arguments to '("quiet").
This improves the readability of the boot process, especially when using full
disk encryption where you're required to enter the passphrase at a particular
point.

* gnu/system.scm (<operating-system>)[kernel-arguments]: Change the default to
'("quiet").
* doc/guix.texi (operating-system Reference): Document this change.
2019-04-22 22:18:00 +01:00
Mark H Weaver fa61900705
gnu: openssh: Update to 8.0p1.
* gnu/packages/ssh.scm (openssh): Update to 8.0p1.
[source]: Remove patch.
* gnu/packages/patches/openssh-CVE-2018-20685.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-04-22 15:02:16 -04:00
Mark H Weaver 8c064d01a0
gnu: minetest: Simplify 'freetype' input specification.
* gnu/packages/games.scm (minetest)[inputs]: Eliminate an unnecessary
use of Guile's '@' syntax to reference the 'freetype' package.
2019-04-22 15:02:13 -04:00
Mark H Weaver ab0c796b67
gnu: minetest-data: Update to 5.0.1.
* gnu/packages/games.scm (minetest-data): Update to 5.0.1.
[description]: Fix typo.
2019-04-22 15:02:11 -04:00
Mark H Weaver df129041dd
gnu: maxima: Return #t from custom 'check' phase.
* gnu/packages/maths.scm (maxima)[arguments]: Use invoke in the custom
check phase.
2019-04-22 14:58:24 -04:00
Tobias Geerinckx-Rice 233eb6c8fe
gnu: ghc-haskell-lexer: Update to 1.0.2.
* gnu/packages/haskell.scm (ghc-haskell-lexer): Update to 1.0.2.
2019-04-22 18:08:18 +02:00
Tobias Geerinckx-Rice a263a97687
gnu: python-redis: Update to 3.2.1.
* gnu/packages/databases.scm (python-redis): Update to 3.2.1.
2019-04-22 15:20:34 +02:00
Tobias Geerinckx-Rice 4dfdcbf5fe
gnu: libabigail: Don't use NAME in source URI.
* gnu/packages/elf.scm (libabigail)[source]: Hard-code NAME.
2019-04-22 15:03:59 +02:00
Tobias Geerinckx-Rice 29cc115436
gnu: libabigail: Update to 1.6.
* gnu/packages/elf.scm (libabigail): Update to 1.6.
2019-04-22 15:03:52 +02:00
Tobias Geerinckx-Rice 1f2f358b69
gnu: python-sqlalchemy: Update to 1.3.3.
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.3.
2019-04-22 14:55:58 +02:00
Tobias Geerinckx-Rice 15357dd7a9
gnu: nsd: Update to 4.1.27.
* gnu/packages/dns.scm (nsd): Update to 4.1.27.
2019-04-22 14:53:48 +02:00
Tobias Geerinckx-Rice ba18ea5f41
gnu: python-pyodbc: Update to 4.0.26.
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.26.
2019-04-22 14:25:14 +02:00
Tobias Geerinckx-Rice fe74e6ac6b
gnu: memcached: Update to 1.5.13.
* gnu/packages/databases.scm (memcached): Update to 1.5.13.
2019-04-22 14:17:00 +02:00
Tobias Geerinckx-Rice 7f221c0e0d
gnu: translate-shell: Update to 0.9.6.10.
* gnu/packages/dictionaries.scm (translate-shell): Update to 0.9.6.10.
2019-04-22 14:12:37 +02:00
Mark H Weaver 6dc4dceba5
gnu: linux-libre: Update to 5.0.9.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.9.
(%linux-libre-hash): Update hash.
2019-04-22 07:08:08 -04:00
Mark H Weaver e81148a11d
gnu: linux-libre@4.19: Update to 4.19.36.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.36.
(%linux-libre-4.19-hash): Update hash.
2019-04-22 07:06:57 -04:00
Mark H Weaver 689b628025
gnu: linux-libre@4.14: Update to 4.14.113.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.113.
(%linux-libre-4.14-hash): Update hash.
2019-04-22 07:05:55 -04:00
Mark H Weaver cfb7aee078
gnu: linux-libre@4.9: Update to 4.9.170.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.170.
2019-04-22 07:04:04 -04:00
Alex Griffin 54b41d2d71
gnu: Add pass-otp.
* gnu/packages/password-utils.scm (pass-otp): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2019-04-22 10:28:43 +01:00
Alex Griffin 5554155649
gnu: password-store: Allow external packages to provide extensions.
* gnu/packages/password-utils.scm (password-store): Add mechanism for
providing pass extensions in separate packages.
[arguments]: Add patch-system-extension-dir phase.
[native-search-paths]: Add PASSWORD_STORE_SYSTEM_EXTENSION_DIR.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2019-04-22 10:28:43 +01:00
Tobias Geerinckx-Rice c60b15cc62
gnu: python-dill: Update to 0.2.9.
* gnu/packages/python-xyz.scm (python-dill): Update to 0.2.9.
2019-04-22 02:36:21 +02:00
Tobias Geerinckx-Rice 1d3c78036f
gnu: python-serpent: Tweak description.
* gnu/packages/python-xyz.scm (python-serpent)[description]:
Use @code{} and edit slightly.
2019-04-22 02:36:21 +02:00
Tobias Geerinckx-Rice fa9d14ac50
gnu: python-serpent: Update to 1.28.
* gnu/packages/python-xyz.scm (python-serpent): Update to 1.28.
[native-inputs]: Add python-attrs & python-pytz.
2019-04-22 02:36:21 +02:00
Tobias Geerinckx-Rice 441e6d936f
gnu: python-openpyxl: Update to 2.6.2.
* gnu/packages/python-xyz.scm (python-openpyxl): Update to 2.6.2.
2019-04-22 02:36:20 +02:00
Tobias Geerinckx-Rice 654563ec83
gnu: perl-text-csv: Fix build.
* gnu/packages/perl.scm (perl-text-csv)[source]: Update URL.
2019-04-22 02:36:20 +02:00
Tobias Geerinckx-Rice 8dafe89593
gnu: parallel: Update to 20190422.
* gnu/packages/parallel.scm (parallel): Update to 20190422.
2019-04-22 02:36:20 +02:00
Tobias Geerinckx-Rice 5df6934cdb
gnu: eid-mw: Update to 4.4.16.
* gnu/packages/security-token.scm (eid-mw): Update to 4.4.16.
2019-04-22 02:32:13 +02:00
Tobias Geerinckx-Rice 50b01dcf3c
gnu: dbacl: Don't use NAME in source URI.
* gnu/packages/textutils.scm (dbacl)[source]: Hard-code NAME.
2019-04-22 02:32:13 +02:00
Tobias Geerinckx-Rice 3671cbe51a
gnu: youtube-dl: Update to 2019.04.17.
* gnu/packages/video.scm (youtube-dl): Update to 2019.04.17.
2019-04-22 02:32:12 +02:00
Tobias Geerinckx-Rice 34a169010e
gnu: dav1d: Update to 0.2.2.
* gnu/packages/video.scm (dav1d): Update to 0.2.2.
2019-04-22 02:32:12 +02:00
Tobias Geerinckx-Rice f465562b10
gnu: foo2zjs: Update to 20190413.
* gnu/packages/cups.scm (foo2zjs): Update to 20190413.
2019-04-22 02:32:12 +02:00
Pierre Langlois 56a4858210
gnu: supertuxkart: Simplify unbundling and unbundle enet.
* gnu/packages/games.scm (supertuxkart)[source](snippet): Delete "lib/enet".
Remove "CMakeList.txt" substitution.
[arguments]<#:configure-flags>: Add "-DUSER_SYSTEM_GLEW=TRUE" and
"-DUSE_SYSTEM_ENET=TRUE".
<#:phases>: Delete.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2019-04-21 22:50:22 +01:00
Pierre Langlois 60af1822d4
gnu: supertuxkart: Update to 1.0.
* gnu/packages/games.scm (supertuxkart): Update to 1.0.
[inputs]: Add openssl.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2019-04-21 22:50:22 +01:00
Kei Kebreau f9fee46ffb
gnu: Add alex4.
* gnu/packages/games.scm (alex4): New variable.
2019-04-21 10:36:19 -04:00
Kei Kebreau d61dcb1b47
gnu: Add dumb-allegro4.
* gnu/packages/music.scm (dumb-allegro4): New variable.
2019-04-21 10:36:19 -04:00
Kei Kebreau 72385c34ba
gnu: Add dumb.
* gnu/packages/music.scm (dumb): New variable.
2019-04-21 10:36:19 -04:00
Mathieu Othacehe 33023baac8
installer: Fix skip-to-step issue.
When trying to jump to the first step, DONE-STEPS ends-up being null, which
fails the matching condition.

* gnu/installer/steps.scm (skip-to-step): Split matching conditions to handle
the empty DONE-STEPS case properly.
2019-04-21 12:12:11 +02:00
Christopher Baines 9729b6ea2f
gnu: direnv: Remove go references from output.
In the long run, it would be good to move direnv across to the
go-build-system, and update the package, but these changes do succeed in
reducing the closure size a lot.

Thanks to Tanguy Le Carrour for raising this issue on guix-devel.

* gnu/packages/shellutils.scm (direnv)[arguments]: Include the
remove-go-references phase from the go-build-system.
[inputs,native-inputs]: Move all inputs to native-inputs, as these are no
longer referenced in the output.
2019-04-21 10:38:30 +01:00
Danny Milosavljevic dc01978288
services: fprintd: Use define-configuration.
* gnu/services/authentication.scm: Use define-configuration in fprintd.
2019-04-21 10:40:19 +02:00
Ricardo Wurmus 17ae31b7a8
gnu: r-hdf5r: Update to 1.2.0.
* gnu/packages/cran.scm (r-hdf5r): Update to 1.2.0.
2019-04-21 10:20:56 +02:00
Mathieu Othacehe dbcd503c46
gnu: guile-parted: Update to 0.0.1.
* gnu/packages/guile-xyz.scm (guile-parted): Update to 0.0.1.
2019-04-21 09:48:26 +02:00
Mathieu Othacehe 442a11f68f
gnu: guile-newt: Update to 0.0.1.
* gnu/packages/guile-xyz.scm (guile-newt): Update to 0.0.1.
2019-04-21 09:45:36 +02:00
Ludovic Courtès 1b0b1651b1
gnu: mtools: 'mformat' initializes boot sector before writing it.
This is the last bit fixing <https://bugs.gnu.org/35283>.

Previously, 'mformat' (used by 'grub-mkrescue') would pass uninitialized
bytes to write(2), leading to non-deterministic FAT image contents.
This patch fixes that.

* gnu/packages/patches/mtools-mformat-uninitialized.patch: New file.
* gnu/packages/mtools.scm (mtools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-21 00:51:19 +02:00
Ludovic Courtès 5502fbd7fd
gnu: valgrind: Add 3.15.0.
* gnu/packages/valgrind.scm (valgrind-3.15): New variable.
2019-04-21 00:51:19 +02:00
Ludovic Courtès 605815023c
vm: Use a fixed FAT serial number for 'efi.img' in ISO images.
Partly fixes <https://bugs.gnu.org/35283>.

* gnu/build/vm.scm (make-iso9660-image): Set the
'GRUB_FAT_SERIAL_NUMBER' environment variable.
2019-04-21 00:51:18 +02:00
Ludovic Courtès 52b5fe5bcf
gnu: grub: 'grub-mkrescue' honors 'GRUB_FAT_SERIAL_NUMBER'.
* gnu/packages/patches/grub-efi-fat-serial-number.patch: New file.
* gnu/packages/bootloaders.scm (grub)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-04-21 00:51:18 +02:00
Ludovic Courtès 6901b9248e
vm: Reset file timestamps of the EFI image in ISO images.
Partly fixes <https://bugs.gnu.org/35283>.

* gnu/build/vm.scm (make-iso9660-image): Set the 'SOURCE_DATE_EPOCH'
environment variable.
2019-04-21 00:51:18 +02:00
Ludovic Courtès 833480cc1f
vm: Reset file timestamps in ISO images.
Partly fixes <https://bugs.gnu.org/35283>.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.

* gnu/build/vm.scm (make-iso9660-image): Pass "-volume_date
all_file_dates =1".
2019-04-21 00:51:18 +02:00
Ludovic Courtès 7859191210
install: Pass "modprobe.blacklist=radeon".
* gnu/system/install.scm (installation-os)[kernel-arguments]: New field.
2019-04-21 00:51:18 +02:00
Kei Kebreau a3e6cf9876
gnu: Add git-lfs.
* gnu/packages/version-control.scm (git-lfs): New variable.
2019-04-20 16:40:35 -04:00
Danny Milosavljevic 2ca3fdc2db
gnu: shishi: Make shishi keys and database administrator-modifiable.
Fixes <https://bugs.gnu.org/30109>.

* gnu/packages/kerberos.scm (shishi)[arguments]<#:configure-flags>:
Add --with-key-dir, --with-db-dir.
<#:phases>[disable-automatic-key-generation]: New phase.
2019-04-20 17:17:56 +02:00
Ricardo Wurmus afabb9ecfb
gnu: ibus-libpinyin: Add missing runtime input.
* gnu/packages/ibus.scm (ibus-libpinyin)[inputs]: Add python-pygobject.
2019-04-20 12:33:10 +02:00
Ricardo Wurmus 446130300e
gnu: libpinyin: Update to 2.3.0.
* gnu/packages/ibus.scm (libpinyin): Update to 2.3.0.
2019-04-20 12:26:12 +02:00
Ricardo Wurmus 811eae11cd
gnu: ibus-libpinyin: Update to 1.11.0.
* gnu/packages/ibus.scm (ibus-libpinyin): Update to 1.11.0.
2019-04-20 12:26:12 +02:00
Ricardo Wurmus b2c6b467f3
gnu: ibus: Update to 1.5.20.
* gnu/packages/ibus.scm (ibus): Update to 1.5.20.
[arguments]: Remove make-flags; remove "--disable-python2" from
configure-flags; add build phase "patch-python-target-directories".
[inputs]: Replace intltool with gnu-gettext.
2019-04-20 12:26:08 +02:00