Commit Graph

7934 Commits

Author SHA1 Message Date
宋文武 27ad574333 gnu: yelp-xsl: Update to 3.20.1.
* gnu/packages/gnome.scm (yelp-xsl): Update to 3.20.1.
2016-05-02 22:06:43 +08:00
宋文武 c51555f414 gnu: epiphany: Update to 3.20.1.
* gnu/packages/gnome.scm (epiphany): Update to 3.20.1.
2016-05-02 22:06:42 +08:00
宋文武 ddfa9131b8 gnu: gvfs: Update to 1.28.1.
* gnu/packages/gnome.scm (gvfs): Update to 1.28.1.
2016-05-02 22:06:42 +08:00
宋文武 3afeb02c51 gnu: eog: Update to 3.20.1.
* gnu/packages/gnome.scm (eog): Update to 3.20.1.
2016-05-02 22:06:42 +08:00
宋文武 88e88997e5 gnu: totem: Update to 3.20.1.
* gnu/packages/gnome.scm (totem): Update to 3.20.1.
2016-05-02 22:06:42 +08:00
宋文武 41150c7d8a gnu: gnome-klotski: Update to 3.20.1.
* gnu/packages/gnome.scm (gnome-klotski): Update to 3.20.1.
2016-05-02 22:06:42 +08:00
宋文武 35907ce11c gnu: gnome-settings-daemon: Update to 3.20.1.
* gnu/packages/gnome.scm (gnome-settings-daemon): Update to 3.20.1.
2016-05-02 22:06:42 +08:00
宋文武 3ffd46bdaf gnu: geocode-glib: Update to 3.20.1.
* gnu/packages/gnome.scm (geocode-glib): Update to 3.20.1.
2016-05-02 22:06:41 +08:00
宋文武 e3cf0c71f1 gnu: gnome-terminal: Update to 3.20.1.
* gnu/packages/gnome.scm (gnome-terminal): Update to 3.20.1.
2016-05-02 22:06:41 +08:00
宋文武 319549c242 gnu: gnome-sudoku: Update to 3.20.0.
* gnu/packages/gnome.scm (gnome-sudoku): Update to 3.20.0.
2016-05-02 22:06:41 +08:00
宋文武 a28bf6b4fe gnu: libsoup: Update to 2.54.1.
* gnu/packages/gnome.scm (libsoup): Update to 2.54.1.
2016-05-02 22:06:41 +08:00
宋文武 90000d4b94 gnu: rest: Update to 0.8.0.
* gnu/packages/gnome.scm (rest): Update to 0.8.0.
2016-05-02 22:06:41 +08:00
宋文武 7958a55d6f gnu: glib-networking: Update to 2.48.1.
* gnu/packages/gnome.scm (glib-networking): Update to 2.48.1.
2016-05-02 22:06:41 +08:00
宋文武 b8f551d91f gnu: vte: Update to 0.44.1.
* gnu/packages/gnome.scm (vte): Update to 0.44.1.
2016-05-02 22:06:41 +08:00
宋文武 ab740c7f2e gnu: gnome-desktop: Update to 3.20.1.
* gnu/packages/gnome.scm (gnome-desktop): Update to 3.20.1.
2016-05-02 22:06:40 +08:00
宋文武 3f57959caa gnu: gtkmm: Update to 3.20.1.
* gnu/packages/gtk.scm (gtkmm): Update to 3.20.1.
2016-05-02 22:06:40 +08:00
宋文武 96e889b031 gnu: gtksourceview: Update to 3.20.2.
* gnu/packages/gtk.scm (gtksourceview): Update to 3.20.2.
2016-05-02 22:06:40 +08:00
宋文武 ccce435a93 gnu: gtk+: Update to 3.20.3.
* gnu/packages/gtk.scm (gtk+): Update to 3.20.3.
2016-05-02 22:06:40 +08:00
宋文武 f507609eac gnu: at-spi2-atk: Update to 2.20.1.
* gnu/packages/gtk.scm (at-spi2-atk): Update to 2.20.1.
2016-05-02 22:06:40 +08:00
宋文武 b67e35e21b gnu: at-spi2-core: Update to 2.20.1.
* gnu/packages/gtk.scm (at-spi2-core): Update to 2.20.1.
2016-05-02 22:06:40 +08:00
宋文武 d998508227 gnu: pango: Update to 1.40.1.
* gnu/packages/gtk.scm (pango): Update to 1.40.1.
2016-05-02 22:06:40 +08:00
Ludovic Courtès ba470833c2 gnu: gtkmm: Run Xvfb for tests.
* gnu/packages/gtk.scm (gtkmm)[arguments]: New field.
2016-05-02 22:06:39 +08:00
宋文武 33cd9bef2c gnu: gedit: Fix build by passing '--disable-spell'.
* gnu/packages/gnome.scm (gedit)[arguments]: Pass '--disable-spell' to configure.
2016-05-02 22:06:39 +08:00
宋文武 ba666b07ea Revert "Revert "gnu: gjs: Skip test_utf8_inout test.""
This reverts commit c4eefd63fa.
2016-05-02 22:06:39 +08:00
宋文武 54e911bcc2 Revert "Revert "gnu: geoclue: Update to 2.4.3.""
This reverts commit e4a7039e46.
2016-05-02 22:06:39 +08:00
宋文武 8e3593353e Revert "Revert "gnu: inkscape: Fix build with glibmm-2.48.""
This reverts commit 267061ba0b.
2016-05-02 22:06:39 +08:00
宋文武 6983ba5660 Revert "Revert "Merge branch 'gnome-updates'""
This reverts commit e969b140a4.
2016-05-02 22:06:36 +08:00
Ricardo Wurmus 8563258337 gnu: Add r-xnomial.
* gnu/packages/statistics.scm (r-xnomial): New variable.
2016-05-02 22:05:54 +08:00
Ben Woodcroft 555f3586ed gnu: ruby-hashery: Update to 2.1.2.
* gnu/packages/ruby.scm (ruby-hashery): Update to 2.1.2.
[arguments]: Remove test workaround.
2016-05-02 22:05:54 +08:00
Nicolas Goaziou d20708b6c5 gnu: asymptote: Update to 2.37.
* gnu/packages/plotutils.scm (asymptote): Update to 2.37.
* gnu/packages/patches/asymptote-gsl2.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove reference.
2016-05-02 22:05:54 +08:00
Danny Milosavljevic 7d5920638a gnu: Add python2-shedskin.
* gnu/packages/python.scm (python2-shedskin): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-05-02 22:05:53 +08:00
Ricardo Wurmus 35518b7545 gnu: guitarix: Update to 0.35.0.
* gnu/packages/audio.scm (guitarix): Update to 0.35.0.
2016-05-02 22:05:53 +08:00
Ricardo Wurmus 457b5eb6d2 gnu: qtractor: Update to 0.7.7.
* gnu/packages/music.scm (qtractor): Update to 0.7.7.
2016-05-02 22:05:53 +08:00
Ricardo Wurmus f03781417b gnu: Add antiword.
* gnu/packages/textutils.scm (antiword): New variable.
2016-05-02 22:05:53 +08:00
Ricardo Wurmus b095e76270 gnu: Add synthv1.
* gnu/packages/music.scm (synthv1): New variable.
2016-05-02 22:05:53 +08:00
John Darrington 8b463616f9 gnu: ao: Replace "itemize" with "enumerate" in description string.
* gnu/packages/xiph.scm (ao): Replace "itemize" with "enumerate" in description string.
  Apparently Guile cannot yet handle "itemize" when creating HTML.
2016-05-02 22:05:53 +08:00
John Darrington 0b63b1625e gnu: ao: Format the description string.
* gnu/packages/xiph.scm (ao): Add markup to description string.
2016-05-02 22:05:52 +08:00
Jan Nieuwenhuizen b8e9c453de gnu: bootstrap: Add case for i686-mingw.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for i686-mingw.

Signed-off-by: Manolis Ragkousis <manolis837@gmail.com>
2016-05-02 22:05:52 +08:00
Ricardo Wurmus b74f64a960 gnu: Add r-xnomial.
* gnu/packages/statistics.scm (r-xnomial): New variable.
2016-05-02 11:10:38 +02:00
Ben Woodcroft cba962086d gnu: ruby-hashery: Update to 2.1.2.
* gnu/packages/ruby.scm (ruby-hashery): Update to 2.1.2.
[arguments]: Remove test workaround.
2016-05-02 10:20:17 +10:00
Nicolas Goaziou acb31b5dcd
gnu: asymptote: Update to 2.37.
* gnu/packages/plotutils.scm (asymptote): Update to 2.37.
* gnu/packages/patches/asymptote-gsl2.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove reference.
2016-05-01 17:58:39 -04:00
Danny Milosavljevic 63bcec7140
gnu: Add python2-shedskin.
* gnu/packages/python.scm (python2-shedskin): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-05-01 13:45:57 -04:00
Ricardo Wurmus d706d94335 gnu: guitarix: Update to 0.35.0.
* gnu/packages/audio.scm (guitarix): Update to 0.35.0.
2016-05-01 18:15:59 +02:00
Ricardo Wurmus dfc9d18e88 gnu: qtractor: Update to 0.7.7.
* gnu/packages/music.scm (qtractor): Update to 0.7.7.
2016-05-01 18:15:59 +02:00
Ricardo Wurmus 1b90e57eb7 gnu: Add antiword.
* gnu/packages/textutils.scm (antiword): New variable.
2016-05-01 18:15:59 +02:00
Ricardo Wurmus a66a60f251 gnu: Add synthv1.
* gnu/packages/music.scm (synthv1): New variable.
2016-05-01 18:15:59 +02:00
John Darrington 2df092a93d gnu: ao: Replace "itemize" with "enumerate" in description string.
* gnu/packages/xiph.scm (ao): Replace "itemize" with "enumerate" in description string.
  Apparently Guile cannot yet handle "itemize" when creating HTML.
2016-05-01 18:11:51 +02:00
John Darrington 55f4b4e00f gnu: ao: Format the description string.
* gnu/packages/xiph.scm (ao): Add markup to description string.
2016-05-01 17:00:52 +02:00
Jan Nieuwenhuizen 3135b95fd8 gnu: bootstrap: Add case for i686-mingw.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for i686-mingw.

Signed-off-by: Manolis Ragkousis <manolis837@gmail.com>
2016-05-01 13:55:33 +03:00
Leo Famulari e411ce1860
gnu: poppler: Fix CVE-2015-8868.
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler/fixed): New variable.
* gnu/packages/patches/poppler-CVE-2015-8868.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-04-30 16:14:38 -04:00
Leo Famulari c7794307f1
gnu: ncmpcpp: Remove bootstrapping phase.
* gnu/packages/mpd.scm (ncmpcpp)[arguments]: Remove 'autogen' phase.
[native-inputs]: Remove autoconf, automake, and libtool.
2016-04-30 14:38:49 -04:00
Ben Woodcroft 324efb8888 gnu: Add muscle.
* gnu/packages/bioinformatics.scm (muscle): New variable.
2016-04-30 15:46:24 +10:00
Mark H Weaver 6c0e2dbbf3 gnu: subversion: Update to 1.8.16 [fixes CVE-2016-{2167,2168}].
* gnu/packages/version-control.scm (subversion): Update to 1.8.16.
2016-04-30 00:31:08 -04:00
Rene Saavedra 7ffbbea00d
gnu: Add uhttpmock.
* gnu/packages/web.scm (uhttpmock): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-29 21:56:27 -04:00
Ben Woodcroft 9d17702500 gnu: ruby-hashery: Disable failing test.
* gnu/packages/ruby.scm (ruby-hashery)[arguments]: Remove failing
test.
2016-04-30 08:44:57 +10:00
Rob Syme b0e52f52b7 gnu: ruby: Update to 2.3.1.
* gnu/packages/ruby.scm (ruby): Update to 2.3.1.
[origin] Add symlink patch.
* gnu/packages/patches/ruby-symlinkfix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
2016-04-30 08:39:27 +10:00
Eric Bavier f36a1ebaab gnu: Add Fossil.
* gnu/packages/version-control.scm (fossil): New variable.
* gnu/packages/patches/fossil-test-fixes.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-04-29 16:42:10 -05:00
Ricardo Wurmus 3b13c3c03c gnu: eigen: Update to 3.2.8.
* gnu/packages/algebra.scm (eigen): Update to 3.2.8.
2016-04-29 22:36:23 +02:00
Danny Milosavljevic 2b56dc019a
gnu: Add hplip.
* gnu/packages/cups.scm (hplip): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-04-29 18:05:44 +02:00
Nicolas Goaziou 99a0044614
gnu: giac-xcas: Update to 1.2.2-41.
* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.2-41.
[inputs]: Add libxinerama.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-29 02:50:41 -04:00
Mark H Weaver 8faee0fd53 gnu: webkitgtk: Update to 2.12.2.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.12.2.
2016-04-28 15:34:59 -04:00
Efraim Flashner a64cbb6f32
gnu: python-celery: Rearrange inputs.
* gnu/packages/python.scm (python-celery)[propagated-inputs]: Move
python-pytz, python-billiard, python-kombu ...
[inputs]: ... to here. Add python-amqp, python-anyjson.
2016-04-28 19:43:21 +03:00
Efraim Flashner 0848d8d3a6
gnu: python-rauth: Rearrange inputs.
* gnu/packages/python.scm (python-rauth)[native-inputs]: Remove it.
[propagated-inputs]: Move python-requests ...
[inputs]: ... to here.
[properties]: Define python2-variant.
(python2-rauth): Build with 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
2016-04-28 19:43:21 +03:00
Ludovic Courtès f28cb89e48
gnu: libtasn1: Replace 4.7 with 4.8 [fixes CVE-2016-4008].
* gnu/packages/tls.scm (libtasn1)[replacement]: New field.
(libtasn1/fixed): New variable.
2016-04-28 18:03:01 +02:00
Kei Yamashita 158f5734cf gnu: Add Red Eclipse.
* gnu/packages/games.scm (redeclipse): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-04-28 18:44:53 +03:00
Alex Kost a319637e97 gnu: magit: Update to 2.6.2.
* gnu/packages/emacs.scm (magit): Update to 2.6.2.
2016-04-28 18:44:52 +03:00
Mark H Weaver dde2a94c09 gnu: icecat: Add fixes for CVE-2016-{2805,2807,2808,2814} etc.
* gnu/packages/patches/icecat-CVE-2016-2805.patch,
gnu/packages/patches/icecat-CVE-2016-2807-pt1.patch,
gnu/packages/patches/icecat-CVE-2016-2807-pt2.patch,
gnu/packages/patches/icecat-CVE-2016-2807-pt3.patch,
gnu/packages/patches/icecat-CVE-2016-2807-pt4.patch,
gnu/packages/patches/icecat-CVE-2016-2807-pt5.patch,
gnu/packages/patches/icecat-CVE-2016-2808.patch,
gnu/packages/patches/icecat-CVE-2016-2814.patch,
gnu/packages/patches/icecat-update-bundled-graphite2: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.

icecat fixup
2016-04-28 10:25:19 -04:00
Mark H Weaver 3161f6a4ec gnu: nss: Update to 3.23.
* gnu/packages/gnuzilla.scm (nss): Update to 3.23.
[arguments]: In the 'install' phase, remove libgtest1.so from the
output.
2016-04-28 10:25:18 -04:00
Mark H Weaver b3107888aa gnu: nspr: Update to 4.12.
* gnu/packages/gnuzilla.scm (nspr): Update to 4.12.
2016-04-28 10:25:18 -04:00
Ricardo Wurmus a39f48b80d gnu: setbfree: Update to 0.8.1.
* gnu/packages/music.scm (setbfree): Update to 0.8.1.
2016-04-28 07:16:55 +02:00
Ricardo Wurmus acf2320b22 gnu: zynaddsubfx: Update to 2.5.4.
* gnu/packages/music.scm (zynaddsubfx): Update to 2.5.4.
2016-04-28 07:16:49 +02:00
宋文武 6fdc73e099 gnu: fltk: Fix undefined symbol `Fl_XFont_On_Demand::value'.
* gnu/packages/patches/fltk-xfont-on-demand.patch: New patch.
* gnu/packages/fltk.scm (fltk)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-04-28 12:23:51 +08:00
Ludovic Courtès 5ca54f41a0
gnu: patches: Update to latest revision.
* gnu/packages/patchutils.scm (patches): Change URL to the repository of
Stefan Hajnoczi, and update to latest revision.
2016-04-27 23:43:36 +02:00
Efraim Flashner 151065d02a gnu: kde-frameworks: Update to 5.21.0.
* gnu/packages/kde-frameworks.scm (extra-cmake-modules, kwindowsystem,
oxygen-icons): Update to 5.21.0.
2016-04-27 22:08:51 +03:00
Efraim Flashner 957ba69290 gnu: quassel: Update to 0.12.4.
* gnu/packages/irc.scm (quassel): Update to 0.12.4.
2016-04-27 22:08:51 +03:00
David Thompson 34879162bc gnu: node: Update to 6.0.0.
* gnu/packages/node.scm (node): Update to 6.0.0.
2016-04-27 14:12:28 -04:00
David Thompson 5304e6f2c9 gnu: libuv: Update to 1.9.0.
* gnu/packages/libevent.scm (libuv): Update to 1.9.0.
2016-04-27 14:12:21 -04:00
Leo Famulari 38e2104c5d
gnu: vdirsyncer: Update to 0.10.0.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.10.0.
[propagated-inputs]: Remove python-lxml.
2016-04-27 14:04:08 -04:00
Leo Famulari 5d88b4f8a8
gnu: mysql: Update to 5.7.12.
Fixes CVE-2016-0639, CVE-2016-0642, CVE-2016-0643, CVE-2016-0647,
CVE-2016-0648, CVE-2016-0655, CVE-2016-0657, CVE-2016-0659, CVE-2016-0662,
CVE-2016-0666, CVE-2016-0667, CVE-2016-0705, CVE-2016-2047.

* gnu/packages/databases.scm (mysql): Update to 5.7.12.
2016-04-27 13:53:56 -04:00
Ludovic Courtès f0b8689884
gnu: blender: Build against ffmpeg 2.8.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/graphics.scm (blender)[inputs]: Use FFMPEG-2.8 instead of
FFMPEG.
2016-04-27 14:17:56 +02:00
Ludovic Courtès 7de1f10363
gnu: Add missing synopses and descriptions.
* gnu/packages/bootstrap.scm (package-from-tarball)
(%bootstrap-glibc, %bootstrap-gcc): Set 'description' field.
* gnu/packages/make-bootstrap.scm (%bootstrap-tarballs): Set 'synopsis'
and 'description'.
2016-04-27 11:57:48 +02:00
Roel Janssen 068e476f68 gnu: Add java-xz.
* gnu/packages/java.scm (java-xz): New variable.
2016-04-27 10:52:34 +02:00
Ricardo Wurmus 5135354f62 gnu: python-ly: Update to 0.9.4.
* gnu/packages/python.scm (python-ly): Update to 0.9.4.
2016-04-27 10:40:23 +02:00
Ben Woodcroft 416381daa2 gnu: ruby-2.2: Update to 2.2.5.
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.5.
[origin]: Remove snippet.
2016-04-27 17:39:05 +10:00
Leo Famulari 8e740bca65
gnu: icedtea-8: Update to 3.0.1.
Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425,
CVE-2016-3426, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-8): Update to 3.0.1.
2016-04-27 01:43:08 -04:00
Leo Famulari 0a0b5ebed2
gnu: icedtea-7: Update to 2.6.6.
Fixes CVE-2016-0686, CVE-2016-0687, CVE-2016-0695, CVE-2016-3425, CVE-2016-3427.

* gnu/packages/java.scm (icedtea-7): Update to 2.6.6.
2016-04-27 00:15:33 -04:00
Ricardo Wurmus 1d6c6af0e2 gnu: Add gimp-fourier.
* gnu/packages/gimp.scm (gimp-fourier): New variable.
2016-04-26 22:18:00 +02:00
Ricardo Wurmus c30a66dedb gnu: Add Aria Maestosa.
* gnu/packages/music.scm (aria-maestosa): New variable.
2016-04-26 22:16:24 +02:00
Ricardo Wurmus fc7c74e43d gnu: wxwidgets: Enable webview support.
* gnu/packages/wxwidgets.scm (wxwidgets)[inputs]: Add webkitgtk-2.4.
[arguments]: Add configure flags to enable webview via the webkitgtk
backend.
2016-04-26 22:15:25 +02:00
Ricardo Wurmus 2729509003 gnu: java-swt: Update to 4.5.
* gnu/packages/java.scm (java-swt): Update to 4.5.
2016-04-26 21:27:15 +02:00
Ricardo Wurmus 4b2eede485 gnu: frescobaldi: Update to 2.19.0.
* gnu/packages/music.scm (frescobaldi): Update to 2.19.0.
2016-04-26 21:12:49 +02:00
Ricardo Wurmus c5ad883b16 gnu: r-rcpparmadillo: Update to 0.6.700.3.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.3.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.3.0.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 2c81794ed9 gnu: r-plotly: Update to 3.4.13.
* gnu/packages/statistics.scm (r-plotly): Update to 3.4.13.
[propagated-inputs]: Add r-hexbin, r-scales, and r-tidyr.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 59bf9f4e6b gnu: r-httr: Update to 1.1.0.
* gnu/packages/statistics.scm (r-httr): Update to 1.1.0.
[propagated-inputs]: Add r-openssl.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 44d792c2e9 gnu: r-r6: Update to 2.1.2.
* gnu/packages/statistics.scm (r-r6): Update to 2.1.2.
[propagated-inputs]: Remove.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 99eca2b18b gnu: r-testthat: Update to 1.0.0.
* gnu/packages/statistics.scm (r-testthat): Update to 1.0.0.
[propagated-inputs]: Add r-magrittr, r-praise, and r-r6.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 0fc4213642 gnu: r-viridis: Update to 0.3.4.
* gnu/packages/statistics.scm (r-viridis): Update to 0.3.4.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 3646bf2082 gnu: r-matrixstats: Update to 0.50.1.
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.50.1.
2016-04-26 17:06:18 +02:00
Ricardo Wurmus 799ef55b15 gnu: r-r-rsp: Update to 0.21.0.
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.21.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 801e9e7399 gnu: r-r-utils: Update to 2.3.0.
* gnu/packages/statistics.scm (r-r-utils): Update to 2.3.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus b2436f6af9 gnu: r-r-oo: Update to 1.20.0.
* gnu/packages/statistics.scm (r-r-oo): Update to 1.20.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 887d45d466 gnu: r-r-methodss3: Update to 1.7.1.
* gnu/packages/statistics.scm (r-r-methodss3): Update to 1.7.1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1e4abc0fee gnu: r-xml: Update to 3.98-1.4.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.4.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1647e10ebd gnu: r-gridextra: Update to 2.2.1.
* gnu/packages/statistics.scm (r-gridextra): Update to 2.2.1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 810e4195fd gnu: r-gtable: Update to 0.2.0.
* gnu/packages/statistics.scm (r-gtable): Update to 0.2.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 0d1ffadc1d gnu: r-rmarkdown: Update to 0.9.5.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 0.9.5.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 408c2d6937 gnu: r-plotrix: Update to 3.6-1.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus cf3568a05d gnu: r-devtools: Update to 1.11.0.
* gnu/packages/statistics.scm (r-devtools): Update to 1.11.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus b5c574c61d gnu: r-rstudioapi: Update to 0.5.
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.5.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 06a4af1283 gnu: r-git2r: Update to 0.14.0.
* gnu/packages/statistics.scm (r-git2r): Update to 0.14.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 904fa49de6 gnu: r-roxygen2: Update to 5.0.1.
* gnu/packages/statistics.scm (r-roxygen2): Update to 5.0.1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 2448c723b7 gnu: r-cluster: Update to 2.0.4.
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.4.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 618dbdd7c0 gnu: r-memoise: Update to 1.0.0.
* gnu/packages/statistics.scm (r-memoise): Update to 1.0.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 8e4edf0802 gnu: r-microbenchmark: Update to 1.4-2.1.
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-2.1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus bb61b765c0 gnu: r-knitr: Update to 1.12.3.
* gnu/packages/statistics.scm (r-knitr): Update to 1.12.3.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 1cfa88e988 gnu: r-formatr: Update to 1.3.
* gnu/packages/statistics.scm (r-formatr): Update to 1.3.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 49089e06ec gnu: r-evaluate: Update to 0.8.3.
* gnu/packages/statistics.scm (r-evaluate): Update to 0.8.3.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 2c8fa9d702 gnu: r-bh: Update to 1.60.0-1.
* gnu/packages/statistics.scm (r-bh): Update to 1.60.0-1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus b268e49691 gnu: r-ggplot2: Update to 2.1.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.1.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus cf2e19a95a gnu: r-scales: Update to 0.4.0.
* gnu/packages/statistics.scm (r-scales): Update to 0.4.0.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 9ee6d314c4 gnu: r-stringi: Update to 1.0-1.
* gnu/packages/statistics.scm (r-stringi): Update to 1.0-1.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus a99bed8cf3 gnu: r-munsell: Update to 0.4.3.
* gnu/packages/statistics.scm (r-munsell): Update to 0.4.3.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus fe2087ccd8 gnu: r-digest: Update to 0.6.9.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.9.
[arguments]: Disable tests and vignettes.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus bae7953852 gnu: Add r-hexbin.
* gnu/packages/statistics.scm (r-hexbin): New variable.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 94b7e9b7b4 gnu: Add r-tidyr.
* gnu/packages/statistics.scm (r-tidyr): New variable.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus c26c062838 gnu: Add r-openssl.
* gnu/packages/statistics.scm (r-openssl): New variable.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 35b2001a14 gnu: Add r-praise.
* gnu/packages/statistics.scm (r-praise): New variable.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus fb868e3395 gnu: r-acsnminer: Update to 0.16.01.29.
* gnu/packages/bioinformatics.scm (r-acsnminer): Update to 0.16.01.29.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus e1c2ad6777 gnu: r-qtl: Update to 1.39-5.
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.39-5.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 2ff8212eb9 gnu: r-curl: Update to 0.9.7.
* gnu/packages/web.scm (r-curl): Update to 0.9.7.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus c0bfa472bd gnu: r-htmlwidgets: Update to 0.6.
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.6.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 46a2d1b66f gnu: r-servr: Update to 0.4.
* gnu/packages/web.scm (r-servr): Update to 0.4.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus 73d5d4aa63 gnu: r-jsonlite: Update to 0.9.19.
* gnu/packages/web.scm (r-jsonlite): Update to 0.9.19.
2016-04-26 17:06:17 +02:00
Ricardo Wurmus c587725a69 gnu: r-rcpp: Update to 0.12.4.
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.4.
2016-04-26 17:06:17 +02:00
Roel Janssen 6b49a37e6b gnu: Add filevercmp.
* gnu/packages/bioinformatics.scm (filevercmp): New variable.
2016-04-26 16:41:15 +02:00
Efraim Flashner 547cb17daf gnu: pinentry: Update to 0.9.7.
* gnu/packages/gnupg.scm (pinentry): Update to 0.9.7.
2016-04-26 15:28:54 +03:00
Alex Kost 82f4414271 gnu: manaplus: Update to 1.6.4.23.
* gnu/packages/games.scm (manaplus): Update to 1.6.4.23.
2016-04-26 12:41:26 +03:00
Alex Kost d1dfa22f9f gnu: git-modes: Update to 1.2.2.
* gnu/packages/emacs.scm (git-modes): Update to 1.2.2.
2016-04-26 12:41:26 +03:00
Alex Kost ffefa3da1a gnu: emacs-with-editor: Update to 2.5.1.
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.1.
2016-04-26 12:41:26 +03:00
Alex Kost edf6015c7d gnu: magit: Update to 2.6.1.
* gnu/packages/emacs.scm (magit): Update to 2.6.1.
2016-04-26 12:41:25 +03:00
Kei Yamashita f674439433 gnu: Add xfce4-taskmanager.
* gnu/packages/xfce.scm (xfce4-taskmanager): Add variable.
2016-04-26 09:25:03 +08:00
Eric Bavier f79ee25f32 gnu: woff2: Fix build parallelism.
* gnu/packages/patches/woff2-libbrotli.patch: Add dependency of
executables on object files.
2016-04-25 18:38:50 -05:00
Efraim Flashner a800018e03 gnu: python2-pysnptools: Update to 0.3.9.
* gnu/packages/python.scm (python2-pysnptools): Update to 0.3.9.
[propagated-inputs]: Add python2-pytz. Move python2-pandas ...
[inputs]: ... to here. Add python2-dateutil-2, python2-six.
2016-04-25 23:35:39 +03:00
Efraim Flashner 783fb0a3a2 gnu: python-terminado: Update to 0.6.
* gnu/packages/python.scm (python-terminado): Update to 0.6.
[inputs]: Remove python-setuptools. Move python-nose ...
[native-inputs]: ... to here.
[properties]: Define python2-variant.
(python2-terminado): Build with 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
2016-04-25 17:19:54 +03:00
Efraim Flashner bdb67d846c gnu: python-singledispatch: Rearrange inputs.
* gnu/packages/python.scm (python-singledispatch)[propagated-inputs]:
Move python-six ...
[inputs]: ... to here.
2016-04-25 17:17:51 +03:00
Efraim Flashner b455439bcd gnu: python-tornado: Rearrange inputs.
* gnu/packages/python.scm (python-tornado)[properties]: Define
python2-variant.
[inputs]: Remove python-certifi, move python-backports-abc here from
native-inputs.
[native-inputs]: Remove python-setuptools.
(python2-tornado): Build with 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
2016-04-25 15:50:22 +03:00
Efraim Flashner fc899d4f73 gnu: python-seaborn: Update to 0.7.0.
* gnu/packages/python.scm (python-seaborn): Update to 0.7.0.
[native-inputs]: Remove python-setuptools.
(python2-seaborn): Build with 'strip-python2-variant'.
[propagated-inputs]: Add python2-pytz.
[native-inputs]: Add python2-setuptools.
2016-04-25 15:28:00 +03:00
Efraim Flashner 4260372671 gnu: python-pandas: Rearrange inputs.
* gnu/packages/python.scm (python-pandas)[propagated-inputs]: Move
python-pytz, python-dateutil-2 ...
[inputs]: ... to here.
2016-04-25 15:27:59 +03:00
宋文武 85f0945916 gnu: xfce: Add ristretto.
* gnu/packages/xfce.scm (xfce)[propagated-inputs]: Add ristretto.
2016-04-25 08:30:54 +08:00
Kei Yamashita 8e6352870d gnu: Add ristretto.
* gnu/packages/xfce.scm (ristretto): Add variable.
2016-04-25 08:27:53 +08:00
Leo Famulari 763dd00b72 gnu: ncmpcpp: Update to 0.7.4.
* gnu/packages/mpd.scm (ncmpcpp): Update to 0.7.4.
2016-04-24 19:25:29 -04:00
Leo Famulari 74182c4f31 gnu: borg: Update to 1.0.2.
* gnu/packages/backup.scm (borg): Update to 1.0.2.
2016-04-24 18:59:06 -04:00
David Thompson 4960beaa23 gnu: haunt: Update to 0.2.
* gnu/packages/guile.scm (haunt): Update to 0.2.
[native-inputs]: Add pkg-config and texinfo.
[propagated-inputs]: Add guile-reader.
2016-04-24 18:01:33 -04:00
Erik Edrosa 76e6e663f5
gnu: guile-minikanren: Remove extra .scm on files.
* gnu/packages/guile.scm (guile-minikanren): Remove extra .scm appended
to files.
2016-04-24 23:47:21 +02:00
Ludovic Courtès ae20189681
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 80627f5.
2016-04-24 23:46:06 +02:00
Leo Famulari 80c1375974 gnu: openldap: Update to 2.4.44 [fixes CVE-2015-6908].
* gnu/packages/openldap.scm (openldap)[replacement]: New field.
(openldap-2.4.44): New variable.
2016-04-24 15:01:41 -04:00
Efraim Flashner f0412aa2bd gnu: python-feedgenerator: Update to 1.8.
* gnu/packages/python.scm (python-feedgenerator): Update to 1.8.
[arguments]: Remove configure flags.
[inputs]: Move python-setuptools, python-pytz, python-six ...
[native-inputs]: ... to here.
[home-page]: Update project's home-page.
2016-04-24 21:49:42 +03:00
Efraim Flashner d9f2dece1f gnu: pelican: Rearrange inputs.
* gnu/packages/python.scm (pelican)[native-inputs]: Remove
python-setuptools.
[propagated-inputs]: Move python-feedgenerator, python-jinja2,
python-pygments, python-docutils, python-pytz, python-blinker,
python-unidecode, python-six, python-dateutil-2 ...
[inputs]: ... to here.
2016-04-24 21:20:42 +03:00
Efraim Flashner 194d0d9843 gnu: python2-itsdangerous: Use 'strip-python2-variant'.
* gnu/packages/python.scm (python2-itsdangerous): Use
'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
(python-itsdangerous)[inputs]: Remove python-setuptools.
[properties]: Define python2-variant.
2016-04-24 20:41:15 +03:00
Efraim Flashner 59f151ec54 gnu: python2-oauthlib: Use python2-variant.
* gnu/packages/python.scm (python2-oauthlib): Use 'strip-python2-variant'.
[native-inputs]: Add python2-setuptools.
(python-oauthlib)[inputs]: Remove python-setuptools.
[properties]: Define python2-variant for python2-oauthlib.
2016-04-24 20:31:23 +03:00
Ben Woodcroft 79b555edeb gnu: samtools: Update to 1.3.1.
* gnu/packages/bioinformatics.scm (samtools): Update to 1.3.1.
2016-04-24 09:45:07 +10:00
Mark H Weaver e969b140a4 Revert "Merge branch 'gnome-updates'"
This reverts commit 63655d459e, reversing
changes made to 80627f51f0.
2016-04-23 13:13:53 -04:00
Mark H Weaver 267061ba0b Revert "gnu: inkscape: Fix build with glibmm-2.48."
This reverts commit 0118c6ab62.
2016-04-23 13:12:53 -04:00
Mark H Weaver e4a7039e46 Revert "gnu: geoclue: Update to 2.4.3."
This reverts commit 71a8d3b67c.
2016-04-23 13:12:51 -04:00
Mark H Weaver c4eefd63fa Revert "gnu: gjs: Skip test_utf8_inout test."
This reverts commit 63e7796f62.
2016-04-23 13:12:49 -04:00
宋文武 63e7796f62 gnu: gjs: Skip test_utf8_inout test.
* gnu/packages/gnome.scm (gjs)[arguments]: Skip test_utf8_inout test.
2016-04-23 20:15:32 +08:00
宋文武 71a8d3b67c gnu: geoclue: Update to 2.4.3.
* gnu/packages/gnome.scm (geoclue): Update to 2.4.3.
2016-04-23 20:15:32 +08:00
Mark H Weaver 0118c6ab62 gnu: inkscape: Fix build with glibmm-2.48.
* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/inkscape.scm (inkscape)[source]: Add patch.
2016-04-23 05:05:18 -04:00
Leo Famulari e993fb8493 gnu: imlib2: Fix CVE-2016-4024.
* gnu/packages/patches/imlib2-CVE-2016-4024.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (imlib2): Use it.
2016-04-22 23:59:37 -04:00
Leo Famulari baa8be83e9 gnu: imlib2: Update to 1.4.8.
gnu/packages/image.scm (imlib2): Update to 1.4.8.
2016-04-22 23:58:33 -04:00
宋文武 63655d459e Merge branch 'gnome-updates' 2016-04-23 10:19:32 +08:00
Mark H Weaver 80627f51f0 gnu: webkitgtk-2.4: Update to 2.4.11.
* gnu/packages/webkit.scm (webkitgtk-2.4): Update to 2.4.11.
2016-04-22 22:05:45 -04:00
Mark H Weaver bd2048585a gnu: webkitgtk: Update to 2.12.1.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.12.1.
2016-04-22 22:05:45 -04:00
Mark H Weaver c1ed117941 gnu: linux-libre-4.1: Update to 4.1.22.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.22.
2016-04-22 21:50:00 -04:00
Mark H Weaver 01963db007 gnu: linux-libre-4.4: Update to 4.4.8.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.8.
2016-04-22 21:50:00 -04:00
Mark H Weaver a2cc073aa2 gnu: linux-libre: Update to 4.5.2.
* gnu/packages/linux.scm (linux-libre): Update to 4.5.2.
2016-04-22 21:50:00 -04:00
Mathieu Lirzin dc9bdb1e27 gnu: Add acpi.
* gnu/packages/linux.scm (acpi): New variable.
2016-04-21 17:49:10 +02:00
Efraim Flashner f8f83e9d21 gnu: python-mox3: Update to 0.14.0.
* gnu/packages/openstack.scm (python-mox3): Update to 0.14.0.
[inputs]: Move python-fixtures, python-pbr, python-setuptools,
python-six, python-testtools ...
[native-inputs]: ... to here.
2016-04-20 16:18:58 +03:00
Efraim Flashner 4b42bd941b gnu: python-stevedore: Update to 1.12.0.
* gnu/packages/openstack.scm (python-stevedore): Update to 1.12.0.
[inputs]: Move python-setuptools, python-docutils, python-mock,
python-oslotest, python-sphinx ...
[native-inputs]: ... to here.
2016-04-20 16:18:58 +03:00
Ricardo Wurmus 458b47e31b gnu: armadillo: Update to 6.700.4.
* gnu/packages/maths.scm (armadillo): Update to 6.700.4.
2016-04-20 14:21:30 +02:00
Leo Famulari 083b3a0e25 gnu: git: Update to 2.7.4 [fixes CVE-2016-2315 and CVE-2016-2324].
* gnu/packages/version-control.scm (git): Update to 2.7.4.
(git-manpages)[source]: Update hash.
2016-04-19 20:39:05 -04:00
Efraim Flashner ab39d8cbc1 gnu: aria2: Update to 1.22.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.22.0.
2016-04-20 02:49:51 +03:00
Efraim Flashner ad25a1fab4 gnu: mpv: Update to 0.17.0.
* gnu/packages/video.scm (mpv): Update to 0.17.0.
2016-04-19 23:52:42 +03:00
Hartmut Goebel 1ad15c1669 gnu: Rename Java packages to match new naming specification.
* gnu/packages/bioinformatics.scm (htsjdk): Rename to...
(java-htsjdk): ...this.
(ngs-java): Rename to...
(java-ngs): ...this.
(ncbi-vdb)[arguments,inputs]: Use new name.
* gnu/packages/java.scm (swt): Rename to...
(java-swt): ...this.
* gnu/packages/music.scm (tuxguitar)[make-flags,inputs,arguments]: Use
new name of package "swt".
2016-04-19 16:55:03 +02:00
Ricardo Wurmus 4d16cc5133 gnu: python2-plastid: Propagate setuptools.
* gnu/packages/bioinformatics.scm (python2-plastid)[native-inputs]: Move
python2-setuptools from here...
[propagated-inputs]: ...to here.
2016-04-19 16:12:51 +02:00
Ricardo Wurmus 8694dca8f3 gnu: r: Update to 3.2.5.
* gnu/packages/statistics.scm (r): Update to 3.2.5.
2016-04-19 14:44:29 +02:00
Ricardo Wurmus 349a314765 gnu: Add icedtea-8.
* gnu/packages/java.scm (icedtea-8): New variable.
2016-04-19 14:44:29 +02:00
宋文武 a4e885f626 glib: Fix tests.
* gnu/packages/glib.scm (glib)[arguments]: Disable the "/application/local-actions"
test in 'disable-failing-tests' phase.
2016-04-19 20:02:44 +08:00
Ricardo Wurmus f94bf1983b gnu: Add python-plastid.
* gnu/packages/bioinformatics.scm (python-plastid, python2-plastid): New
  variables.
2016-04-19 12:16:01 +02:00
Ricardo Wurmus 4db9433aa0 gnu: Add python-twobitreader.
* gnu/packages/bioinformatics.scm (python-twobitreader,
  python2-twobitreader): New variables.
2016-04-19 12:16:01 +02:00
Danny Milosavljevic 3fd4b90d1d gnu: Add cabextract.
* gnu/packages/compression.scm (cabextract): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 16:02:53 -04:00
Kei Yamashita c21a256272 gnu: Add dillo.
* gnu/packages/dillo.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 15:45:41 -04:00
Kei Yamashita cf1b55bd32 gnu: fltk: Add Xft support.
* gnu/packages/fltk.scm (fltk)[inputs]: Add libxft.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 15:39:34 -04:00
Ludovic Courtès cd76fbde6f gnu: vlc: Make 'plugins.dat' generation reproducible.
Fixes <http://bugs.gnu.org/23307>.

* gnu/packages/video.scm (vlc)[arguments]: Add #:phases.
2016-04-18 15:39:43 +02:00
Ludovic Courtès 4ef2721b52 gnu: vlc: Do not capture the build time.
* gnu/packages/video.scm (vlc)[source]: Add 'snippet'.
2016-04-18 12:08:31 +02:00
Ludovic Courtès b4dff93550 gnu: vlc: Build against ffmpeg 2.8.
Fixes <http://bugs.gnu.org/23256>.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.

* gnu/packages/video.scm (vlc): Use FFMPEG-2.8 instead of FFMPEG.
2016-04-18 11:58:15 +02:00
Ludovic Courtès 940778c71c gnu: ffmpeg: Re-add 2.8.6.
* gnu/packages/video.scm (ffmpeg-2.8): New variable.
2016-04-18 11:26:30 +02:00
Ben Woodcroft 9bb46c155b gnu: ruby-bio-commandeer: Update to 0.1.3.
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.1.3.
2016-04-18 14:58:43 +10:00
Ricardo Wurmus fac34dfe2a gnu: Add python-pyusb.
* gnu/packages/libusb.scm (python-pyusb, python2-pyusb): New variables.
2016-04-17 21:48:51 +02:00
Leo Famulari d99f6ffb4c gnu: khard: Update to 0.9.0.
* gnu/packages/mail.scm (khard): Update to 0.9.0.
2016-04-17 14:35:11 -04:00