7da473b757
gnu: Revert use of '--strip-all'.
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This reverts commits f05bdc9412856ae5e6c7http://hydra.gnu.org/eval/102058 >,
for example.
2014-12-29 21:54:12 +01:00
f05bdc9412
gnu: Don't use --strip-all in cases where this is problematic.
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This is a followup to 856ae5ehttp://hydra.gnu.org/build/180506 >
for an example of build failure.
* guix/build/gnu-build-system.scm (strip): Add #:archive-strip-flags
parameter. Use it when (ar-file? path).
* guix/build-system/gnu.scm (gnu-build): Add #:archive-strip-flags
parameter and pass it down.
* gnu/packages/commencement.scm (gcc-boot0)[arguments]: Add
#:strip-flags.
* gnu/packages/base.scm (glibc)[arguments]: Likewise.
2014-12-28 23:46:59 +01:00
2a8d44015f
gnu: libxml2: Add search path specification.
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* gnu/packages/xml.scm (libxml2)[native-search-paths, search-paths]: New
fields.
* gnu/packages/gnome.scm (gnome-doc-utils)[arguments]: Remove.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Remove settings for
'XML_CATALOG_FILES' from 'configure' phase.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
2014-12-27 23:54:23 +01:00
af07095516
packages: Add 'file-type' field to 'search-path-specification'.
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Fixes <http://bugs.gnu.org/18033 >.
* guix/packages.scm (<search-path-specification>): Rename 'directories'
field to 'files'. Add 'file-type'.
(search-path-specification->sexp): Honor 'file-type'.
* gnu/packages/autotools.scm, gnu/packages/bootstrap.scm,
gnu/packages/cross-base.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/glib.scm,
gnu/packages/guile.scm, gnu/packages/man.scm,
gnu/packages/perl.scm, gnu/packages/pkg-config.scm,
gnu/packages/python.scm, gnu/packages/ruby.scm,
gnu/packages/xfce.scm: Change 'directories' to 'files'.
* tests/packages.scm ("search paths"): Change 'directories' field to
'files'.
* guix/scripts/environment.scm (for-each-search-path): Likewise.
2014-12-27 23:22:49 +01:00
856ae5e6c7
build-system/gnu: Strip with '--strip-all' instead of '--strip-debug'.
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This saves 19% on the 'bin' directory of Coreutils, and certainly
helpful for things like Git's 'libexec' directory.
* guix/build-system/gnu.scm (gnu-build): Change default value for
#:strip-flags to '("--strip-all").
* guix/build/gnu-build-system.scm (strip): Ditto.
* gnu/packages/linux.scm (linux-libre)[arguments]: Add #:strip-flags.
2014-12-27 19:20:18 +01:00
9a224ac2e3
gnu: Use patch --force instead of --batch.
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* gnu/packages/linux.scm (linux-libre, net-tools): Pass "--force" to patch,
instead of "--batch".
* gnu/packages/mit-krb5.scm (mit-krb5): Ditto.
2014-12-27 08:45:17 -05:00
8c89f514bf
gnu: gettext: Update to 0.19.4.
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* gnu/packages/gettext.scm (gnu-gettext): Update to 0.19.4.
2014-12-27 12:25:31 +01:00
84c84ce7bf
gnu: binutils: Update to 2.25.
...
* gnu/packages/base.scm (binutils): Update to 2.25.
2014-12-27 12:25:31 +01:00
6ac8aa3d75
gnu: m4: Remove already-applied patch.
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* gnu/packages/patches/m4-readlink-EINVAL.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/m4.scm (m4): Remove patch.
2014-12-26 20:26:10 -05:00
0d12bc744e
gnu: gcc-4.8: Update to 4.8.4.
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* gnu/packages/gcc.scm (gcc-4.8): Update to 4.8.4. Remove patch.
* gnu/packages/patches/gcc-fix-pr61801.patch: Remove.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
2014-12-27 00:17:43 +01:00
763a401ed1
Merge branch 'master' into core-updates
2014-12-26 23:31:04 +01:00
be7134bf75
gnu: Add pysam.
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* gnu/packages/python.scm (python-pysam, python2-pysam): New variables.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-26 23:28:13 +01:00
ee97be9fb4
gnu: Add fastjar.
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* gnu/packages/compression.scm (fastjar): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-26 23:28:13 +01:00
fb916f4dd6
gnu: qemu: Update to 2.2.0.
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* gnu/packages/qemu.scm (qemu): Update to 2.2.0.
2014-12-26 09:01:15 -05:00
53a427cf20
gnu: ntp: Update to 4.2.8.
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* gnu/packages/ntp.scm (ntp): Update to 4.2.8. Add openssl to inputs.
Add pkg-config to native-inputs. Change source URI to archive.ntp.org.
2014-12-25 00:19:36 -05:00
764c077b30
Revert "gnu: matplotlib: Comment out python2-matplotlib."
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This reverts commit afc720d34c
2014-12-23 19:17:17 +01:00
afc720d34c
gnu: matplotlib: Comment out python2-matplotlib.
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* gnu/packages/python.scm (python2-matplotlib, python2-scipy, python2-numpy):
Comment out python2-matplotlib and the packages making use of it as the
generation of the derivation of these packages takes very long.
2014-12-23 17:56:48 +01:00
d95523fb8b
packages: Sort Scheme file lists used by 'fold-packages'.
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* gnu/packages.scm (scheme-files): Call 'sort' on result.
2014-12-21 12:29:14 +01:00
eea3e54c59
gnu: Add xfce4-terminal.
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* gnu/packages/xfce.scm (xfce4-terminal): New variable.
2014-12-20 13:06:01 +08:00
ea57378f24
gnu: Add vte.
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* gnu/packages/gnome.scm (vte, vte/gtk+-2): New variables.
2014-12-20 13:01:47 +08:00
24d56899a1
services: xorg: Make SLiM sessions configurable.
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* gnu/services/xorg.scm (%default-xsessions): New variable.
(xsessions-directory): New procedure.
(slim-service): Add #:sessions and #:auto-login-session parameters.
[slim.cfg]: Honor #:sessions.
(xinitrc): Adjust accordingly.
2014-12-20 11:12:00 +08:00
2c7ee16720
gnu: Add bowtie
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* gnu/packages/bioinformatics.scm (bowtie): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-19 18:50:28 +01:00
7f5c2a9cc1
services: static-networking-service: Switch to (guix build syscalls).
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* gnu/services/networking.scm (static-networking-service): Remove
#:inetutils parameter. Rewrite using 'configure-network-interface'
and 'set-network-interface-flags'.
2014-12-19 17:15:53 +01:00
cdae969ae5
gnu: Add Clone.
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* gnu/packages/perl.scm (perl-clone): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-19 17:15:53 +01:00
9e0997230c
gnu: cairocffi: Move to python module.
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* gnu/packages/gtk.scm, gnu/packages/python.scm (python-cairocffi,
python2-cairocffi): Move variables from gtk to python module to avoid
circular dependency.
Reported by Mark H Weaver <mhw@netris.org>
2014-12-18 22:00:19 +01:00
25f9a068f2
gnu: matplotlib: Add gtk3 backends and optional dependency. Adjust inputs.
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* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Add gtk3
backends with the necessary inputs and a 'configure-environment' phase. Add
the optional 'python-pillow' dependency. Move 'python-pyparsing' from
'inputs' to 'propagated-inputs' as it is required at run time.
2014-12-18 17:58:10 +01:00
63cd6e5a95
gnu: Add cairocffi.
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* gnu/packages/gtk.scm (python-cairocffi, python2-cairocffi): New variables.
2014-12-18 17:58:10 +01:00
6fa144692c
gnu: Add xcffib
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* gnu/packages/python.scm (python-xcffib, python2-xcffib): New variables.
2014-12-18 17:58:10 +01:00
46a3e00b5b
gnu: icecat: Build with PulseAudio support.
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* gnu/packages/gnuzilla.scm (icecat)[arguments]: Add
--enable-pulseaudio.
2014-12-17 14:06:59 +01:00
80db9915a0
gnu: linux-libre: Update to 3.18.1
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* gnu/packages/linux.scm (linux-libre): Update to version 3.18.1.
2014-12-17 04:30:52 -08:00
7576cbd6da
gnu: Add Test::Simple.
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* gnu/packages/perl.scm (perl-test-simple): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-17 00:11:28 +01:00
0ad3969fcd
gnu: Add Test::Deep.
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* gnu/packages/perl.scm (perl-test-deep): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-17 00:11:28 +01:00
9dc8a1577f
gnu: Add Test::NoWarnings.
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* gnu/packages/perl.scm (perl-test-nowarnings): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-17 00:11:28 +01:00
ea0a52d7d6
gnu: Add Test::Tester.
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* gnu/packages/perl.scm (perl-test-tester): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-17 00:11:27 +01:00
6a84316848
Revert "gnu: python-numpy-bootstrap: Reduce matrix size in failing test."
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This reverts commit 31557440c2
2014-12-16 18:37:13 +01:00
81de56479a
gnu: Add bedtools
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* gnu/packages/bioinformatics.scm (bedtools): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-16 18:17:15 +01:00
b336da21e9
gnu: tmux: Update to 1.9a.
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* gnu/packages/tmux.scm (tmux): Update to 1.9a
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-16 18:17:15 +01:00
f3cd952b45
gnu: samtools: disable tests for non-64-bit systems
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* gnu/packages/bioinformatics.scm (samtools): disable tests for all non-64-bit
systems because of an upstream bug in the test data.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-12-16 18:17:15 +01:00
a142e38e9d
gnu: groff: Disable parallel builds.
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* gnu/packages/groff.scm (groff): Disable parallel builds.
2014-12-16 11:16:54 -05:00
dec7ab5953
gnu: groff: Update to 1.22.3.
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* gnu/packages/groff.scm (groff): Update to 1.22.3.
2014-12-16 03:28:06 -05:00
a6e818586b
gnu: ghostscript: Update to 9.14.0.
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* gnu/packages/ghostscript.scm (ghostscript): Update to 9.14.0.
Change license to agpl3+.
2014-12-16 03:08:00 -05:00
6b282cc9fb
gnu: lcms: Update to 2.6.
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* gnu/packages/ghostscript.scm (lcms): Update to 2.6.
2014-12-16 03:07:57 -05:00
9f8552fab5
gnu: icecat: Apply security updates for CVE-2014-{1587,1590,1592,1593,1594}.
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* gnu/packages/patches/icecat-CVE-2014-1587-bug-1042567.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1072847.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1079729.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1080312.patch,
gnu/packages/patches/icecat-CVE-2014-1587-bug-1089207.patch,
gnu/packages/patches/icecat-CVE-2014-1590.patch,
gnu/packages/patches/icecat-CVE-2014-1592.patch,
gnu/packages/patches/icecat-CVE-2014-1593.patch,
gnu/packages/patches/icecat-CVE-2014-1594.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat): Add them.
2014-12-15 20:42:53 -05:00
6cb89466ba
gnu: Add bullet.
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* gnu/packages/game-development.scm: New file
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2014-12-15 08:09:04 -05:00
5a659a489e
gnu: Add vala.
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* gnu/packages/gnome.scm (vala): New variable.
2014-12-15 18:51:30 +08:00
5afbfb9924
gnu: youtube-dl: Update to 2014.12.15.
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* gnu/packages/video.scm (youtube-dl): Update to 2014.12.15.
2014-12-15 03:36:54 -05:00
bfb8486929
gnu: Add xfce4-battery-plugin.
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* gnu/packages/xfce.scm (xfce4-battery-plugin): New variable.
2014-12-14 19:46:12 -05:00
d814f921f1
gnu: xfce4-panel: Support panel plugins from other packages.
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* gnu/packages/patches/xfce4-panel-plugins.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/xfce.scm (xfce4-panel): Add the patch, and a
native search path specification for X_XFCE4_LIB_DIRS.
2014-12-14 19:45:59 -05:00
31557440c2
gnu: python-numpy-bootstrap: Reduce matrix size in failing test.
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* gnu/packages/python.scm (python-numpy-bootstrap): Add phase
'fix-failing-tests.
2014-12-14 20:01:22 +01:00
de51bf58b9
gnu: Add xdotool.
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* gnu/packages/xdisorg.scm (xdotool): New variable.
2014-12-14 18:43:22 +01:00
Ludovic Courtès