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16422 Commits (83dcfa72d4d7aadf7c772607a97f6501de106dca)

Author SHA1 Message Date
David Craven 83dcfa72d4
gnu: flex: Update to 2.6.2. 
* gnu/packages/flex.scm (flex): Update to 2.6.2.
  [native-inputs]: Add help2man.
  [origin]: Update uri to github. Remove CVE-2016-6354 patch.
  (flex-2.6.1): Remove variable.
* gnu/packages/patches/flex-CVE-2016-6354.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Update.
* gnu/packages/kde-frameworks.scm (solid, kservice)[native-inputs]: Use
  flex.
 2016-12-02 21:28:05 +01:00
Tobias Geerinckx-Rice 7d07e2a527
gnu: gnutls: Update 3.5.6. 
* gnu/packages/tls.scm (gnutls): Update to 3.5.6.
 2016-11-30 14:26:28 +01:00
Manolis Ragkousis 9b5f498def
gnu: glibc-hurd: Force mach/hurd/libpthread subdirs to build first. 
* gnu/packages/base.scm (glibc/hurd)[arguments]: Replace 'build' phase.

Co-authored-by: Ludovic Court<C3><A8>s <ludo@gnu.org>
 2016-11-30 15:17:38 +02:00
Leo Famulari f265a3cee5
gnu: libarchive: Update to 3.2.2. 
* gnu/packages/backup.scm (libarchive): Update to 3.2.2.
[source]: Remove obsolete patches.
* gnu/packages/patches/libarchive-7zip-heap-overflow.patch,
gnu/packages/patches/libarchive-fix-filesystem-attacks.patch,
gnu/packages/patches/libarchive-fix-symlink-check.patch,
gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-28 21:10:25 -05:00
Leo Famulari e673a1df29
gnu: libarchive: Fix typo in 'libarchive-safe_fprintf-buffer-overflow.patch'. 
* gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch:
Use correct URL in patch documentation.
 2016-11-28 21:10:19 -05:00
Marius Bakke be12f4e275
build-system/perl: Don't create non-deterministic 'perllocal.pod' files. 
* guix/build/perl-build-system.scm (configure): Add "NO_PERLLOCAL=1"
to Makefile.PL arguments.
 2016-11-28 23:11:39 +01:00
Efraim Flashner bd128e2e8f
gnu: mpfr: Update to 3.1.5. 
* gnu/packages/multiprecision.scm (mpfr): Update to 3.1.5.
 2016-11-27 10:47:06 +02:00
Efraim Flashner 51c8e2996c
gnu: sed: Use 'modify-phases' syntax. 
* gnu/packages/base.scm (sed)[arguments]: Use 'modify-phases' syntax.
 2016-11-27 10:25:45 +02:00
Efraim Flashner b7a5a4821f
gnu: grep: Update to 2.26. 
* gnu/packages/base.scm (grep): Update to 2.26.
 2016-11-27 10:23:59 +02:00
Efraim Flashner 31bd09e5a8
gnu: nettle: Update to 3.3. 
* gnu/packages/nettle.scm (nettle): Update to 3.3.
[home-page]: Use https.
 2016-11-27 09:44:48 +02:00
Efraim Flashner feefbb0946
gnu: bash: Update to patch level 5. 
* gnu/packages/bash.scm (%patch-url-seqno): Update for bash-4.4.
(%patch-series-4.4): Add patches 1 to 5.
 2016-11-27 09:24:40 +02:00
Efraim Flashner c296d5d119
gnu: icu4c: Use 'modify-phases' syntax. 
* gnu/packages/icu4c.scm (icu4c)[arguments]: Use 'modify-phases' syntax.
 2016-11-27 09:24:40 +02:00
Efraim Flashner 5499de02ca
gnu: icu4c: Update to 58.1. 
* gnu/packages/icu4c.scm (icu4c): Update to 58.1.
[source]: Download from their website.
[arguments]: Remove extra bash replacement.
 2016-11-27 09:24:40 +02:00
Leo Famulari e30abbbb02
gnu: cyrus-sasl: Incorporate grafted patch. 
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[source]: Use
'cyrus-sasl-CVE-2013-4122.patch'.
[replacement]: Remove field.
(cyrus-sasl/fixed): Remove variable.
 2016-11-26 16:23:42 -05:00
Leo Famulari a282cdae10
Merge branch 'master' into core-updates 2016-11-26 16:21:47 -05:00
Leo Famulari cd65d600ac
gnu: cyrus-sasl: Fix CVE-2013-4122. 
* gnu/packages/patches/cyrus-sasl-CVE-2013-4122.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[replacement]: New field.
(cyrus-sasl/fixed): New variable.
[source]: Use patch.
 2016-11-26 16:21:02 -05:00
Efraim Flashner 439a2f62ce
gnu: ffmpeg: Update to 3.2.1. 
* gnu/packages/video.scm (ffmpeg): Update to 3.2.1.
 2016-11-26 22:53:13 +02:00
Leo Famulari 9e46245b89
gnu: gst-plugins-good: Fix CVE-2016-{9634,9635,9636} and other security issues. 
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gstreamer.scm (gst-plugins-good): Use them.
 2016-11-26 14:27:24 -05:00
Julien Lepiller 5305ed2002
services: Factorize configuration abstraction. 
* gnu/services/mail.scm and gnu/services/cups.scm (&configuration-error)
(configuration-error, configuration-field-error)
(configuration-missing-field, configuration-field, serialize-configuration)
(validate-configuration, define-configuration, uglify-field-name)
(serialize-field, serialize-package, serialize-string)
(serialize-space-separated-string-list, space-separated-string-list?)
(serialize-file-name, file-name?, serialize-field-name)
(generate-documentation): Move duplicate code...
* gnu/services/configuration.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add configuration.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-26 19:46:01 +01:00
Leo Famulari cf3678df6e
gnu: psyclpc: Update comment. 
This is a followup to commit eaa45301f4.

* gnu/packages/messaging.scm (psyclpc): Update comment.
 2016-11-26 13:36:51 -05:00
ng0 ebfc2ecc3c
gnu: Move content of (gnu packages psyc) into (gnu packages messaging). 
* gnu/packages/psyc.scm (perl-net-psyc, libpsyc, psyclpc): Move this ...
* gnu/packages/messaging.scm (perl-net-psyc, libpsyc, psyclpc): ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove psyc.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-26 13:23:46 -05:00
ng0 eaa45301f4
gnu: psyclpc: Upgrade to 20160821-2.61cf9aa. 
This makes the package reproducible.

* gnu/packages/psyc.scm (psyclpc): Upgrade to 20160821-2.61cf9aa.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-26 13:23:46 -05:00
Danny Milosavljevic c6c80104ab
gnu: python-flask: Update to 0.11.1. 
* gnu/packages/python.scm (python-flask): Update to 0.11.1.
[native-inputs]: Add python-click.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
Danny Milosavljevic 61684de287
gnu: python-pyopenssl: Update to 16.2.0. 
* gnu/packages/python.scm (python-pyopenssl): Update to 16.2.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
Danny Milosavljevic b2e6e150aa
gnu: python-simplejson: Update to 3.10.0. 
* gnu/packages/python.scm (python-simplejson): Update to 3.10.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 16:35:07 +01:00
宋文武 5aed7f10f3
pull: Add guile-ssh to the dependencies. 
Fix regression introduced in 9e76eed.

* build-aux/build-self.scm (guile-ssh): New variable.
(build)[builder]: Add 'guile-ssh' to %load-path and %load-compiled-path.
 2016-11-26 22:03:23 +08:00
ng0 faa29e4bdb
gnu: Add mumble. 
* gnu/packages/telephony.scm (mumble): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 12:32:22 +01:00
Marius Bakke 4f55441fe3
gnu: transmission: Update to 2.92. 
* gnu/packages/bittorrent.scm (transmission): Update to 2.92.
[inputs]: Add cyrus-sasl.
 2016-11-26 12:32:01 +01:00
Ben Woodcroft 5e0a0f4226
gnu: roary: Update to 3.7.0. 
* gnu/packages/bioinformatics.scm (roary): Update to 3.7.0.
 2016-11-26 20:15:39 +10:00
Ben Woodcroft 31a9d653ad
gnu: Add proteinortho. 
* gnu/packages/bioinformatics.scm (proteinortho): New variable.
 2016-11-26 20:15:37 +10:00
Julien Lepiller d3eff97afd
gnu: Add python-polib. 
* gnu/packages/python.scm (python-polib, python2-polib): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-26 10:29:29 +01:00
Marius Bakke 3ad8cb4163
gnu: sqlite: Update to 3.15.1. 
* gnu/packages/databases.scm (sqlite): Update to 3.15.1.
[source]: Download from sqlite.org.
[home-page]: Use HTTPS.
(sqlite-3.15.1): Remove.
* gnu/packages/php.scm (php)[inputs]: Change 'sqlite-3.15.1' to 'sqlite'.
 2016-11-26 09:09:17 +01:00
Marius Bakke c254ac3200
build-system/gnu: Make libraries writable before stripping. 
* guix/build/gnu-build-system.scm (strip)[strip-dir]: Change mode of
files before running strip-command.
 2016-11-26 09:07:07 +01:00
John Darrington fc5dc4e81c
gnu: Whitespace changes 
* gnu/services/kerberos.scm: Fold lines to 80 character limit.
 2016-11-26 07:37:33 +01:00
ng0 75675e4556
mailmap: Associate all commits by ng0 with ng0. 
Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-26 01:00:58 -05:00
Leo Famulari 53d892dd92
gnu: imagemagick: Update to 6.9.6-6 [fixes CVE-2016-9556]. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-6.
 2016-11-26 00:38:45 -05:00
宋文武 c940b8e682
doc: mysql-configuration: Fix typo. 
* doc/guix.texi (Database Services): Fix typo of 'mysql-configuration'.
 2016-11-26 12:50:11 +08:00
宋文武 f88371e866
services: Add opensmtpd service. 
* gnu/services/mail.scm (<opensmtpd-configuration>): New record type.
(%default-opensmtpd-config-file, %opensmtpd-accounts): New variables.
(opensmtpd-shepherd-service, opensmtpd-activation): New procedures.
(opensmtpd-service-type): New variable.
* doc/guix.texi (Mail Services): Document it.
 2016-11-26 12:50:11 +08:00
Leo Famulari 0959478c72
gnu: Add missing module import to (gnu packages ldc). 
This is a followup to commit e44b511298.

* gnu/packages/ldc.scm: Import (gnu packages python).
 2016-11-25 23:18:29 -05:00
Danny Milosavljevic e44b511298
gnu: ldc: Update to 0.17.2. 
* gnu/packages/ldc.scm (ldc): Update to 0.17.2.
* gnu/packages/patches/ldc-disable-tests.patch: Fix timezone file name.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-25 23:54:51 +01:00
Ludovic Courtès bc1ad4e334
offload: Drop 'remote-pipe'. 
* guix/scripts/offload.scm (remote-pipe): Remove.
(machine-load): Use 'open-remote-pipe*' instead of 'remote-pipe'.
 2016-11-25 23:44:21 +01:00
Ludovic Courtès cf283dd92e
offload: Rewrite to make direct RPCs to the remote daemon. 
* guix/scripts/offload.scm (<build-machine>)[daemon-socket]: New field.
(connect-to-remote-daemon): New procedure.
(%gc-root-file, register-gc-root, remove-gc-roots, offload): Remove.
(transfer-and-offload): Rewrite using 'connect-to-remote-daemon' and
RPCs over SSH.
(store-import-channel, store-export-channel): New procedures.
(send-files, retrieve-files): Rewrite using these.
 2016-11-25 23:44:20 +01:00
Ludovic Courtès e8a5db80d5
offload: Remove 'with-nar-error-handling' macro. 
* guix/scripts/offload.scm (with-nar-error-handling): Remove.
(guix-offload): Use 'with-error-handling' instead.
 2016-11-25 23:44:20 +01:00
Ludovic Courtès 6230d6f04f
store: 'open-connection' can taken an open port. 
* guix/store.scm (open-unix-domain-socket): New procedure.
(open-connection): Add #:port parameter and honor it.
 2016-11-25 23:44:20 +01:00
Ludovic Courtès 9e76eed37f
offload: Reuse SSH session during 'transfer-and-offload'. 
* guix/scripts/offload.scm (remote-pipe): Replace 'machine' parameter
with 'session'.  Remove 'open-ssh-session' call.
(register-gc-root): Replace 'machine' with 'session'.  Use '
session-get' instead of 'build-machine-name'.
(remove-gc-roots, offload, send-files, retrieve-files): Likewise.
(transfer-and-offload): Add 'open-ssh-session' call.  Handle 'offload'
errors here.
(machine-load): Add call to 'open-ssh-session'.
 2016-11-25 23:44:20 +01:00
Ludovic Courtès 21531add32
offload: Use Guile-SSH instead of GNU lsh. 
* guix/scripts/offload.scm (<build-machine>)[ssh-options]: Remove.
[host-key, host-key-type]: New fields.
(%lsh-command, %lshg-command, user-lsh-private-key): Remove.
(user-openssh-private-key, private-key-from-file*): New procedures.
(host-key->type+key, open-ssh-session): New procedures.
(remote-pipe): Remove 'mode' parameter.  Rewrite in terms of
'open-ssh-session' etc.  Update users.
(send-files)[missing-files]: Rewrite using the bidirectional channel
port.
Remove call to 'call-with-compressed-output-port'.
(retrieve-files): Remove call to 'call-with-decompressed-port'.
(machine-load): Remove exit status logic.
* doc/guix.texi (Requirements): Mention Guile-SSH.
(Daemon Offload Setup): Document 'host-key' and 'private-key'.  Show the
default value on each @item line.
* m4/guix.m4 (GUIX_CHECK_GUILE_SSH): New macro.
* config-daemon.ac: Use 'GUIX_CHECK_GUILE_SSH'.  Set
'HAVE_DAEMON_OFFLOAD_HOOK' as a function of that.
 2016-11-25 23:44:20 +01:00
Ludovic Courtès 6634180f9e
gnu: guile-ssh: Update to 0.10.2. 
* gnu/packages/ssh.scm (guile-ssh): Update to 0.10.2.
[home-page]: Update.
[source]: Use the 'url-fetch' method and a GitHub generated
tarball.
[arguments] <autoreconf>: Remove now unneeded 'chmod' call.
 2016-11-25 23:44:20 +01:00
Ricardo Wurmus 7276b5604d
gnu: hydrogen: Update to 0.9.7. 
* gnu/packages/music.scm (hydrogen): Update to 0.9.7.
 2016-11-25 21:44:16 +01:00
Tobias Geerinckx-Rice d66cbd1adc
gnu: btrfs-progs: Update to 4.8.4. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.4.
 2016-11-25 17:00:51 +01:00
Tobias Geerinckx-Rice fc89cb691d
gnu: lz4: Update to 1.7.4.2. 
* gnu/packages/compression.scm (lz4): Update to 1.7.4.2.
 2016-11-25 16:31:20 +01:00