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Author SHA1 Message Date
Ricardo Wurmus 9e482c2069
gnu: r-iranges: Update to 2.12.0. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.12.0.
 2017-11-07 08:15:33 +01:00
Ricardo Wurmus 41f0f94976
gnu: r-s4vectors: Update to 0.16.0. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.16.0.
 2017-11-07 08:15:33 +01:00
Ricardo Wurmus 2167eafc1d
gnu: r-biocstyle: Update to 2.6.0. 
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.6.0.
 2017-11-07 08:15:32 +01:00
Ricardo Wurmus 3241461670
gnu: r-biocinstaller: Update to 1.28.0. 
* gnu/packages/bioinformatics.scm (r-biocinstaller): Update to 1.28.0.
 2017-11-07 08:15:32 +01:00
Ricardo Wurmus d61fc4e104
gnu: r-biocgenerics: Update to 0.24.0. 
* gnu/packages/bioinformatics.scm (r-biocgenerics): Update to 0.24.0.
 2017-11-07 08:15:32 +01:00
Ricardo Wurmus 704fe4d115
gnu: r-grohmm: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.12.0.
 2017-11-07 08:15:32 +01:00
Ricardo Wurmus 843826e262
gnu: r-shortread: Update to 1.36.0. 
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.36.0.
 2017-11-07 08:15:31 +01:00
Ricardo Wurmus b53755258a
gnu: r-systempiper: Update to 1.12.0. 
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.12.0.
 2017-11-07 08:15:31 +01:00
Ricardo Wurmus 9f52e53d5d
gnu: r-gseabase: Update to 1.40.0. 
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.40.0.
 2017-11-07 08:15:31 +01:00
Ricardo Wurmus fad7c0c7bd
gnu: r-sva: Update to 3.26.0. 
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.26.0.
 2017-11-07 08:15:31 +01:00
Ricardo Wurmus 91e1867972
gnu: r-methylkit: Update to 1.4.0. 
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.4.0.
 2017-11-07 08:15:31 +01:00
Ricardo Wurmus c126ba69db
gnu: r-copywriter: Update to 2.10.0. 
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.10.0.
 2017-11-07 08:15:30 +01:00
Ricardo Wurmus 598dacf657
gnu: r-annotationfilter: Update to 1.2.0. 
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.2.0.
 2017-11-07 08:15:30 +01:00
Ricardo Wurmus e6b332d43b
gnu: r-rhdf5: Update to 2.22.0. 
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.22.0.
 2017-11-07 08:15:30 +01:00
Ricardo Wurmus 19e8929cbd
gnu: r-tximport: Update to 1.6.0. 
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.6.0.
 2017-11-07 08:15:30 +01:00
Ricardo Wurmus da153b7f94
gnu: r-bamsignals: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (r-bamsignals): Update to 1.10.0.
 2017-11-07 08:15:30 +01:00
Ricardo Wurmus 5c18470008
gnu: r-zlibbioc: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-zlibbioc): Update to 1.24.0.
 2017-11-07 08:15:29 +01:00
Ricardo Wurmus 1d0263b44e
gnu: r-rhtslib: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.10.0.
 2017-11-07 08:15:29 +01:00
Ricardo Wurmus c25154e5cb
gnu: r-rbgl: Update to 1.54.0. 
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.54.0.
 2017-11-07 08:15:29 +01:00
Ricardo Wurmus 727706ad38
gnu: r-annotationforge: Update to 1.20.0. 
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.20.0.
 2017-11-07 08:15:29 +01:00
Ricardo Wurmus 3fd010ff30
gnu: r-dexseq: Update to 1.24.0. 
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.0.
 2017-11-07 08:15:28 +01:00
Ricardo Wurmus 0166dc07ef
gnu: r-deseq2: Update to 1.18.0. 
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.18.0.
 2017-11-07 08:15:28 +01:00
Ricardo Wurmus 554fac74aa
gnu: r-genefilter: Update to 1.60.0. 
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.60.0.
 2017-11-07 08:15:28 +01:00
Ricardo Wurmus cb4d3ff2c4
gnu: r-geneplotter: Update to 1.56.0. 
* gnu/packages/bioinformatics.scm (r-geneplotter): Update to 1.56.0.
 2017-11-07 08:15:28 +01:00
Ricardo Wurmus 2d4e887dc0
gnu: r-annotate: Update to 1.56.0. 
* gnu/packages/bioinformatics.scm (r-annotate): Update to 1.56.0.
 2017-11-07 08:15:28 +01:00
Ricardo Wurmus 94fd86e5e1
gnu: r-dnacopy: Update to 1.52.0. 
* gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.52.0.
 2017-11-07 08:15:27 +01:00
Ricardo Wurmus c7782c3f1f
gnu: r-biocviews: Update to 1.46.0. 
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.46.0.
[propagated-inputs]: Remove r-knitr.
 2017-11-07 08:15:27 +01:00
Ricardo Wurmus 7373b4167a
gnu: r-bioccheck: Update to 1.14.0. 
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.14.0.
[native-inputs]: Remove which.
[propagated-inputs]: Add r-stringdist.
 2017-11-07 08:15:27 +01:00
Ricardo Wurmus a40a04fdbb
gnu: Add r-stringdist. 
* gnu/packages/cran.scm (r-stringdist): New variable.
 2017-11-07 08:15:27 +01:00
Ricardo Wurmus 8ca2b2b06e
gnu: r-rgraphviz: Update to 2.22.0. 
* gnu/packages/graph.scm (r-rgraphviz): Update to 2.22.0.
 2017-11-07 08:15:27 +01:00
Ludovic Courtès a0e4b41b40
gnu: guile-git: Update snapshot. 
* gnu/packages/guile.scm (guile-git): Update to commit 951a32c.
 2017-11-07 00:12:11 +01:00
Brendan Tildesley fedde43b6d
gnu: moka-icon-theme: Fix license. 
* gnu/packages/gnome.scm (moka-icon-theme): Add cc-by-sa4.0 to license field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:11 +01:00
Brendan Tildesley 550281fb5f
gnu: moka-icon-theme: Add faba-icon-theme as propagated input. 
* gnu/packages/gnome.scm (moka-icon-theme)[propagated-inputs]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:11 +01:00
Brendan Tildesley 8b0e4177ee
gnu: moka-icon-theme: Simplify package definition. 
* gnu/packages/gnome.scm (moka-icon-theme): Inherit faba-icon-theme to avoid
  duplicating similar package definition.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:11 +01:00
Brendan Tildesley d935e6a12c
gnu: Add faba-icon-theme. 
* gnu/packages/gnome.scm (faba-icon-theme): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:11 +01:00
Carlo Zancanaro 47bd32d98e
gnu: electrum: Update to 3.0. 
gnu/packages/finance.scm (electrum): Update to 3.0.
[inputs]: Change to python3 inputs.
[arguments]: Remove python-2. Disable tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:10 +01:00
Carlo Zancanaro ea0421bbf6
gnu: Add python-jsonrpclib-pelix. 
* gnu/packages/python.scm (python-jsonrpclib-pelix, python2-jsonrpclib-pelix):
New variables.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-07 00:12:10 +01:00
Ludovic Courtès 96dc8f3527
packages: 'fold-packages' takes #:select? parameter. 
* gnu/packages.scm (fold-packages): Add #:select? parameter and honor it.
 2017-11-07 00:12:10 +01:00
Ludovic Courtès 0ad5f80982
Fix ambiguous imports. 
* gnu/packages/ocaml.scm: Hide 'zip' from (srfi srfi-1).
* guix/git.scm: Select 'mkdir-p' from (guix build utils).
 2017-11-07 00:12:10 +01:00
Efraim Flashner 913027f383
gnu: nnn: Update to 1.5. 
* gnu/packages/admin.scm (nnn): Update to 1.5.
 2017-11-06 23:07:19 +02:00
Efraim Flashner 6a534909fa
gnu: libuninameslist: Update to 20170807. 
* gnu/packages/fontutils.scm (libuninameslist): Update to 20170807.
 2017-11-06 23:07:13 +02:00
Efraim Flashner 10b159a303
gnu: u-boot: Only install 'MLO' output if it exists. 
* gnu/packages/bootloaders.scm (u-boot)[arguments]: Add 'MLO' to
uboot-files only if it has been built.
 2017-11-06 22:54:28 +02:00
Mathieu Othacehe b1a3079347
system: vm: Use 2^32 - 1 as hash size. 
* gnu/system/vm.scm (operating-system-uuid): Use 2^32 - 1 instead of
  2^32 as hash size.

On some 32 bit system (ARM for example), 2^32 exceeds hash max
size (ULONG_MAX = 2^32 - 1).
 2017-11-06 20:02:25 +01:00
Mathieu Othacehe dd208b936c
bootloaders: uboot: Add .img and MLO files to binary outputs. 
* gnu/packages/bootloaders.scm (make-u-boot-package): Add .img and MLO files
  as binary output.
 2017-11-06 19:58:21 +01:00
Mathieu Othacehe f6948189a9
linux: Add omap2plus generic kernel. 
* gnu/packages/linux.scm (linux-libre-arm-omap2plus): New exported variable.
 2017-11-06 19:55:10 +01:00
Mathieu Othacehe 2ac42fe51f
gnu: uboot: Fix same-arch? check. 
* gnu/packages/bootloaders.scm (make-u-boot-package): Compare %current-system
  to system associated to given triplet. Comparing a system and a triplet
  didn't make sense.
 2017-11-06 19:53:13 +01:00
Efraim Flashner d298e7652a
gnu: perl-test-www-mechanize-psgi: Update source uri. 
* gnu/packages/web.scm (perl-test-www-mechanize-psgi)[source]: Update to
new source uri.
 2017-11-06 20:39:45 +02:00
Efraim Flashner 12c613b548
gnu: dtc: Build python bindings. 
* gnu/packages/bootloaders.scm (dtc)[native-inputs]: Add swig.
[inputs]: Add python-2.
[arguments]: Remove 'NO_PYTHON' from make-flags, add 'SETUP_PREFIX' to
set python bindings prefix.
 2017-11-06 20:39:45 +02:00
Efraim Flashner ab8757c5b1
gnu: dtc: Update to 1.4.5. 
* gnu/packages/bootloaders.scm (dtc): Update to 1.4.5.
[arguments]: Add NO_PYTHON flag to make-flags.
 2017-11-06 20:39:45 +02:00
Efraim Flashner 9371600ec8
gnu: libxres: Update to 1.2.0. 
* gnu/packages/xorg.scm (libxres): Update to 1.2.0.
 2017-11-06 20:02:45 +02:00
Tobias Geerinckx-Rice fd592a12e2
gnu: youtube-dl: Update to 2017.11.06. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.11.06.
 2017-11-06 18:18:41 +01:00
Efraim Flashner 8f4e3b95df
gnu: aria2: Update to 1.33.0. 
* gnu/packages/bittorrent.scm (aria2): Update to 1.33.0.
 2017-11-06 06:18:31 +02:00
Efraim Flashner 08e1f38ddd
gnu: emacs-undo-tree: Parameterize source uri. 
* gnu/packages/emacs.scm (emacs-undo-tree)[source]: Replace hard-coded
version with version parameter.
 2017-11-06 06:18:26 +02:00
Leo Famulari 73cd4022d6
gnu: borg: Update to 1.1.2. 
* gnu/packages/backup.scm (borg): Update to 1.1.2.
[arguments]: Disable another test in the 'check' phase.
 2017-11-05 20:36:05 -05:00
Eric Bavier d8799bd0df
gnu: netsurf: Update to 3.7. 
For compatibility, dependents must be updated at the same time.

* gnu/packages/web.scm (libcss): Update to 0.7.0
(nsgenbind): Update to 0.5.
(netsurf): Update to 3.7.
[arguments]: Fix binary name in .desktop.  Adjust "docs" directory name.
* gnu/packages/patches/netsurf-system-utf8proc.patch: Adjust to new source.
 2017-11-05 07:46:08 -06:00
Eric Bavier 772588bd22
gnu: libnspsl: Update to 0.1.2. 
* gnu/packages/web.scm (libnspsl): Update to 0.1.2.
 2017-11-05 07:46:08 -06:00
Eric Bavier f379c52f27
gnu: libnsgif: Update to 0.2.0. 
* gnu/packages/web.scm (libnsgif): Update to 0.2.0.
 2017-11-05 07:46:08 -06:00
Eric Bavier b20d97f848
gnu: libsvgtiny: Update to 0.1.6. 
* gnu/packages/web.scm (libsvgtiny): Update to 0.1.6.
 2017-11-05 07:46:08 -06:00
Eric Bavier 036f47a37e
gnu: libdom: Update to 0.3.2. 
* gnu/packages/web.scm (libdom): Update to 0.3.2.
 2017-11-05 07:46:08 -06:00
Eric Bavier e33f6efd60
gnu: libwapcaplet: Update to 0.4.0. 
* gnu/packages/web.scm (libwapcaplet): Update to 0.4.0.
 2017-11-05 07:46:08 -06:00
Eric Bavier 84dec7a0c0
gnu: hubbub: Update to 0.3.4. 
* gnu/packages/web.scm (hubbub): Update to 0.3.4.
 2017-11-05 07:46:07 -06:00
Eric Bavier bf56082605
gnu: netsurf-buildsystem: Update to 1.6. 
* gnu/packages/web.scm (netsurf-buildsystem): Update to 1.6.
 2017-11-05 07:46:00 -06:00
ng0 511d8a02e8
gnu: emacs-evil: Update to 1.2.13. 
* gnu/packages/emacs.scm (emacs-evil): Update to 1.2.13.
(source): Adjust URL to new upstream location on github.
(home-page): likewise.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 19:23:47 +01:00
ng0 db574f7183
gnu: emacs-slime: Use correct Texinfo commands in the description. 
Previously the description had "@{something}" in it which is never
valid Texinfo. This commit changes it to use "@command{something}"
to render the full description.

* gnu/packages/emacs.scm (emacs-slime)[description]: Correct Texinfo usage.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 19:23:33 +01:00
ng0 77a7891b87
gnu: emacs-undo-tree: Update to 0.6.6. 
* gnu/packages/emacs (emacs-undo-tree): Update to 0.6.6.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 19:23:20 +01:00
ng0 5fa1b4174a
gnu: emacs-which-key: Update to 3.0.2. 
* gnu/packages/emacs.scm (emacs-which-key): Update to 3.0.2.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 19:22:31 +01:00
ng0 9505877205
gnu: emacs-neotree: Update to 0.5.2. 
* gnu/packages/emacs.scm (emacs-neotree): Update to 0.5.2.
[source](uri): Adjust URL to tag change.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 19:22:14 +01:00
Marius Bakke aa70cf8c36
gnu: redis: Update to 4.0.2. 
* gnu/packages/databases.scm (redis): Update to 4.0.2.
 2017-11-05 19:03:32 +01:00
Rutger Helling 39f2433c39
gnu: sdl2: Update to 2.0.7 and enable Wayland backend. 
* gnu/packages/sdl.scm (sdl2): Update to 2.0.7.
[inputs]: Add wayland, wayland-protocols, libxkbcommon.
[arguments]: Add '--disable-wayland-shared' to #:configure-flags.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 18:14:19 +01:00
Gábor Boskovits 7c5cc40097
gnu: add disorderfs. 
* gnu/packages/file-systems.scm (disorderfs): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:50:48 +01:00
Gábor Boskovits e55c46b850
gnu: python-decorator: Update to 4.1.2. 
* gnu/packages/python.scm (python-decorator): Update to 4.1.2.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:27:42 +01:00
Brendan Tildesley 743d3f6502
gnu: calibre: Install mimetypes. 
* gnu/packages/ebook.scm (calibre)[arguments]: Install mimetypes xml file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:01 +01:00
Brendan Tildesley 9132212fb8
gnu: calibre: Add optipng as an input. 
* gnu/packages/ebook.scm (calibre)[inputs]: Add optipng.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:01 +01:00
Brendan Tildesley bf4a40db3c
gnu: calibre: Add python2-dukpy as an input. 
* gnu/packages/ebook.scm (calibre)[inputs]: Add python2-dukpy. dukpy was
  unbundled from Calibre, so we need to to use the Guix version.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:01 +01:00
Brendan Tildesley 2e15906c1c
gnu: Add python-dukpy, python2-dukpy. 
gnu/packages/python.scm (python-dukpy, python2-dukpy): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:01 +01:00
Brendan Tildesley 7ed93a6c9e
gnu: calibre: Update to 3.11.1. 
* gnu/packages/ebook.scm (calibre): Update to 3.11.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:01 +01:00
Rutger Helling 540dd1c8cc
gnu: retroarch: Enable Wayland support. 
* gnu/packages/games.scm (retroarch)[inputs]: Add wayland.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:00 +01:00
Rutger Helling ca1ddce8a3
gnu: weston: Update to 3.0.0. 
* gnu/packages/freedesktop.scm (weston): Update to 3.0.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:00 +01:00
rennes 8d2bde86ec
gnu: lollypop: Update to 0.9.304. 
* gnu/packages/gnome.scm (lollypop): Update to 0.9.304.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-11-05 17:24:00 +01:00
Tobias Geerinckx-Rice 08d61397cd
gnu: gnome-terminal: Update to 3.26.2. 
* gnu/packages/gnome.scm (gnome-terminal): Update to 3.26.2.
 2017-11-05 16:44:51 +01:00
Tobias Geerinckx-Rice 68488f275d
gnu: vte: Update to 0.50.2. 
* gnu/packages/gnome.scm (vte): Update to 0.50.2.
 2017-11-05 16:44:50 +01:00
Marius Bakke 7561be8699
gnu: fio: Update to 3.2. 
* gnu/packages/benchmark.scm (fio): Update to 3.2.
 2017-11-05 16:16:51 +01:00
Marius Bakke 3c41b9929b
gnu: feh: Update to 2.22. 
* gnu/packages/image-viewers.scm (feh): Update to 2.22.
[native-search-paths]: New field.
 2017-11-05 16:08:02 +01:00
Ludovic Courtès 21b71b01e9
services: Add 'description' fields. 
* gnu/services/admin.scm (rottlog-service-type)
(tailon-service-type): Add 'description' field.
* gnu/services/audio.scm (mpd-service-type): Likewise.
* gnu/services/avahi.scm (avahi-service-type): Likewise.
* gnu/services/ssh.scm (lsh-service-type)
(openssh-service-type, dropbear-service-type): Likewise.
 2017-11-05 15:29:52 +01:00
nee b6d2930d1f
services: Add murmur. 
* gnu/services/telephony.scm: New file.
* gnu/local.mk: Add it.
* doc/guix.texi (Telephony Services): New node.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-11-05 15:21:53 +01:00
Manolis Ragkousis 50c229caf9
gnu: fio: Update to 3.1. 
* gnu/packages/benchmark.scm (fio): Update to 3.1.
 2017-11-05 12:29:46 +02:00
Hartmut Goebel 1289001a5d
gnu: prison: Move to be in alphabetical order. 
I was trapped be the definitions not being in alphabetical order.

* gnu/packages/kde-frameworks.scm (prison): Move in front of
  solid.
 2017-11-05 10:56:40 +01:00
Hartmut Goebel a7dc855725
gnu: kdewebkit: Move to be in alphabetical order. 
I was trapped by the definitions not being in alphabetical order.

* gnu/packages/kde-frameworks.scm (kdewebkit): Move in front of
  kemoticons.
 2017-11-05 10:56:40 +01:00
Hartmut Goebel 39d1a429fe
gnu: kactivities: Move to tier 2. 
KDE now lists this package as tier 2, I was trapped by the
definitions being at the wrong place.

* gnu/packages/kde-frameworks.scm (kactivities): Move into the
  "section" of tier 2 packages. (kactivities-stats) Remove now
  obsolete comment.
 2017-11-05 10:56:39 +01:00
Hartmut Goebel 571f1fa3b2
gnu: libksysguard: Update to 5.11.2. 
* gnu/packages/kde.scm (libksysguard): Update to 5.11.2.
 2017-11-05 10:56:39 +01:00
Hartmut Goebel e8737735a2
gnu: solid: Enable building interface for qml. 
* gnu/package/kde-frameworks.scm(solid)[inputs]: Add qtdeclarative.
 2017-11-05 10:56:38 +01:00
Hartmut Goebel b1beb1670b
gnu: krunner: Make some tests pass. 
* gnu/packages/kde-frameworks.scm[arguments]
  <#:tests?>: Remove.
  <#:phases>[fix-paths-for-test'] New phase.
  <#:phases>[check-setup]: Set $HOME. Blacklist a failing new-in-5.39.0 test.
 2017-11-05 10:56:37 +01:00
Hartmut Goebel 5bc1efd77d
gnu: kdelibs4support: Make test kstandarddirstest pass. 
* gnu/package/kde-frameworks.scm(kdelibs4support)[#:phases]
  <check-post-install>: Add workaround for bug in test-case.
  Update comment.
 2017-11-05 10:56:36 +01:00
Hartmut Goebel fa274ab2c0
gnu: kimageformats: Update comment. 
* gnu/packages/kde-frameworks.scm(kimageformats): Update comment.
 2017-11-05 10:56:36 +01:00
Hartmut Goebel 6211aadf4b
gnu: kde-frameworks: Update to 5.39.0. 
Beside simple updating:
- ktexteditor: Add input.
- kdelibs4support: Enable test kmimetypetest, disable test kuniqueapptest.
- kimageformats: Make the plugins available for tests.
- krunner: Make old tests pass again. Blacklist a failing new test.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, breeze-icons,
  extra-cmake-modules, kactivities, kactivities-stats, kapidox, karchive,
  kauth, kbookmarks, kcmutils, kcodecs, kcompletion, kconfig, kconfigwidgets,
  kcoreaddons, kcrash, kdbusaddons, kdeclarative, kded,
  kde-frameworkintegration, kdelibs4support, kdesignerplugin, kdesu,
  kdewebkit, kdnssd, kdoctools, kemoticons, kfilemetadata, kglobalaccel,
  kguiaddons, khtml, ki18n, kiconthemes, kidletime, kimageformats, kinit, kio,
  kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwidgetsaddons,
  kwindowsystem, kxmlgui, kxmlrpcclient, modemmanager-qt, networkmanager-qt,
  oxygen-icons, plasma-framework, prison, solid, sonnet, threadweaver): Update
  to 5.39.0
  (ktexteditor) Update to 5.39.0. [source]: Add patch. [inputs]: Add
  qtdeclarative.
  (kdelibs4support): Update to 5.39.0. [#:phase check-post-install]: Remove
  kmimetypetest from and add kuniqueapptest to list of test to be excluded
  when running ctest.
  (kimageformats): Update to 5.39.0. [#:phase check-setup] Make the plugins
  available for tests.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-11-05 10:56:35 +01:00
Hartmut Goebel 9f5bd38f94
gnu: extra-cmake-modules: Install pri-files into lib/qt5/. 
This in accordance with the documentation in
ECMGeneratePriFile.cmake: "Packagers … want to set
`ECM_MKSPECS_INSTALL_DIR` to something like
`share/qt5/mkspecs/modules`." Our Qt5 is putting pri-files into
`lib/qt5/mkspecs/modules`.

* gnu/packages/kde-frameworks.scm(extra-cmake-modules)[#:phase fix-lib-path]:
  New substitute for file 'modules/ECMGeneratePriFile.cmake'.
 2017-11-05 10:56:34 +01:00
Marius Bakke 46dea1241c
gnu: icedtea: Update to 3.6.0 [security fixes]. 
Fixes CVE-2017-{10274,10821,10825,10295,10388,10346,10350,10347,10349,10345,
10348,10357,10355,10356,10165} and CVE-2016-{10165,9840,9841,9842,9843}.

* gnu/packages/java.scm (icedtea-8): Update to 3.6.0.
[native-inputs]: Update dependency hashes.
 2017-11-04 15:33:59 +01:00
Ben Woodcroft 171ba2480f
gnu: diamond: Update to 0.9.12. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.12.
 2017-11-04 10:51:44 +10:00
Marius Bakke d3f140218b
gnu: sssd: Disable failing test. 
* gnu/packages/sssd.scm (sssd)[arguments]<#:phases>: Add substitution to
'disable-failing-test' phase.
 2017-11-04 00:07:40 +01:00
Marius Bakke f1ae27b608
gnu: samba: Update to 4.7.1. 
* gnu/packages/samba.scm (samba): Update to 4.7.1.
 2017-11-04 00:07:40 +01:00
Marius Bakke ad25310dd5
gnu: ldb: Update to 1.3.0. 
* gnu/packages/samba.scm (ldb): Update to 1.3.0.
 2017-11-04 00:07:40 +01:00
Marius Bakke d94c679254
gnu: re2: Update to 2017-11-01. 
* gnu/packages/regex.scm (re2): Update to 2017-11-01.
 2017-11-04 00:07:39 +01:00
Marius Bakke 1695bd788d
gnu: libxfont@1: Update to 1.5.3. 
* gnu/packages/xorg.scm (libxfont): Update to 1.5.3.
[source](patches): Remove.
 2017-11-04 00:07:39 +01:00
Ricardo Wurmus 66865ab8ac
gnu: multiqc: Update to 1.3. 
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.3.
[propagated-inputs]: Add python-enum34.
[license]: The license was changed to "GPLv3 or later" with this release.
 2017-11-03 17:18:52 +01:00
Kei Kebreau 416ad6feaa
gnu: iso-codes: Update to 3.76. 
* gnu/packages/iso-codes.scm (iso-codes): Update to 3.76.
 2017-11-03 09:34:13 -04:00
Ricardo Wurmus b12c6a664d
gnu: r-ape: Update to 5.0. 
* gnu/packages/bioinformatics.scm (r-ape): Update to 5.0.
[propagated-inputs]: Add r-rcpp.
 2017-11-03 14:14:38 +01:00
Ricardo Wurmus 840782204f
gnu: r-bbmle: Update to 1.0.20. 
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.20.
 2017-11-03 14:14:38 +01:00
Ricardo Wurmus 1a1b4f0571
gnu: r-proxy: Update to 0.4-19. 
* gnu/packages/cran.scm (r-proxy): Update to 0.4-19.
 2017-11-03 14:14:38 +01:00
Ricardo Wurmus a8a2871f71
gnu: r-glue: Update to 1.2.0. 
* gnu/packages/cran.scm (r-glue): Update to 1.2.0.
 2017-11-03 14:14:38 +01:00
Ricardo Wurmus a6ec5b7043
gnu: r-withr: Update to 2.1.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.1.0.
[propagated-inputs]: Add r-lattice.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus fd9afcf4ea
gnu: r-quantreg: Update to 5.34. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.34.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 1fe75660c0
gnu: r-robustbase: Update to 0.92-8. 
* gnu/packages/statistics.scm (r-robustbase): Update to 0.92-8.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 1fb415cb50
gnu: r-purrr: Update to 0.2.4. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.4.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus c8818f5577
gnu: r-irlba: Update to 2.3.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.1.
 2017-11-03 14:14:37 +01:00
Ricardo Wurmus 116e9837b5
gnu: r-checkmate: Update to 1.8.5. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.5.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus fde66e3018
gnu: r-multitaper: Update to 1.0-14. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-14.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus 0a123e0609
gnu: r-data-table: Update to 1.10.4-3. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4-3.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus b5a2f37157
gnu: r-pryr: Update to 0.1.3 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.3.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus bc409c8d3b
gnu: r-lazyeval: Update to 0.2.1. 
* gnu/packages/statistics.scm (r-lazyeval): Update to 0.2.1.
 2017-11-03 14:14:36 +01:00
Ricardo Wurmus 6b968c4cd3
gnu: Add r-corrplot. 
* gnu/packages/cran.scm (r-corrplot): New variable.
 2017-11-03 10:34:24 +01:00
Ricardo Wurmus 81e0b62502
gnu: Add r-ggrepel. 
* gnu/packages/cran.scm (r-ggrepel): New variable.
 2017-11-03 10:34:23 +01:00
Mark H Weaver 0f3142e7c3
gnu: linux-libre: Update to 4.13.11. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.11.
(%linux-libre-hash): Update hash.
 2017-11-03 01:31:06 -04:00
Mark H Weaver 336b8d422d
gnu: linux-libre@4.9: Update to 4.9.60. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.60.
 2017-11-03 01:30:25 -04:00
Mark H Weaver 15d44dfe22
gnu: linux-libre@4.4: Update to 4.4.96. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.96.
 2017-11-03 01:29:33 -04:00
Oleg Pykhalov 72df48dbad
gnu: Add kodi-cli. 
* gnu/packages/kodi.scm (kodi-cli): New variable.
 2017-11-03 06:46:03 +03:00
Ricardo Wurmus 1d84500a72
gnu: conda: Fix environment scripts. 
* gnu/packages/package-management.scm (conda)[arguments]: Add phase
"undo-wrap".
 2017-11-03 00:12:46 +01:00
Marius Bakke ada53b1d50
Revert "gnu: itstool: Update to 2.0.4." 
This reverts commit 13fbd174b5.
 2017-11-02 23:00:23 +01:00
Marius Bakke 77576be41f
gnu: openssl@1.1: Update to 1.1.0g [fixes CVE-2017-3735, CVE-2017-2736]. 
* gnu/packages/tls.scm (openssl-next): Update to 1.1.0g.
[source]: Add HTTPS mirror.
 2017-11-02 22:21:59 +01:00
Marius Bakke 1df4f5c919
gnu: openssl@1.0: Replace with 1.0.2m [fixes CVE-2017-3735, CVE-2017-2736]. 
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl-1.0.2m): New public variable.
 2017-11-02 22:21:59 +01:00
Efraim Flashner 22bf67d1f4
gnu: enlightenment: Update to 0.22.0. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.0.
 2017-11-02 23:05:11 +02:00
Efraim Flashner 41b5408235
gnu: efl: Update to 1.20.5. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.5.
 2017-11-02 23:05:09 +02:00
Marius Bakke bc183968f5
gnu: vte-ng: Update to 0.50.2.a. 
* gnu/packages/gnome.scm (vte-ng): Update to 0.50.2.a.
 2017-11-02 21:17:41 +01:00
Tobias Geerinckx-Rice 52995941bc
gnu: gnome-todo: Update to 3.26.2. 
* gnu/packages/gnome.scm (gnome-todo): Update to 3.26.2.
 2017-11-02 21:10:21 +01:00
Tobias Geerinckx-Rice 92c9392767
gnu: dconf-editor: Update to 3.26.2. 
* gnu/packages/gnome.scm (dconf-editor): Update to 3.26.2.
 2017-11-02 21:10:21 +01:00
Tobias Geerinckx-Rice b39e612115
gnu: gnome-clocks: Update to 3.26.1. 
* gnu/packages/gnome.scm (gnome-clocks): Update to 3.26.1.
 2017-11-02 21:10:20 +01:00
Tobias Geerinckx-Rice 1b59d45ee4
gnu: file-roller: Update to 3.26.2. 
gnu/packages/gnome.scm (file-roller): Update to 3.26.2.
 2017-11-02 21:10:20 +01:00
Tobias Geerinckx-Rice 46994d0d4c
gnu: aisleriot: Update to 3.22.4. 
* gnu/packages/gnome.scm (aisleriot): Update to 3.22.4.
 2017-11-02 21:10:19 +01:00
Tobias Geerinckx-Rice 03e775d4e8
gnu: knot: Update to 2.6.1. 
* gnu/packages/dns.scm (knot): Update to 2.6.1.
 2017-11-02 21:10:18 +01:00
Tobias Geerinckx-Rice 73b80ff924
gnu: miniupnpc: Update to 2.0.20171102. 
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20171102.
 2017-11-02 21:10:18 +01:00
Rutger Helling 3440f12a7e
gnu: mpv: enable Wayland support. 
* gnu/packages/video.scm (mpv)[inputs]: Add wayland and libxkbcommon.
 2017-11-02 16:03:25 -04:00
Kei Kebreau 13fbd174b5
gnu: itstool: Update to 2.0.4. 
* gnu/packages/glib.scm (itstool): Update to 2.0.4.
[inputs]: Replace python and python-libxml2 with python-2 and python2-libxml2.
 2017-11-02 15:37:22 -04:00
Kei Kebreau 67bd376b1a
gnu: gnome-maps: Update to 3.26.2. 
* gnu/packages/geo.scm (gnome-maps): Update to 3.26.2.
[arguments]: In 'install' phase, add webkitgtk to LD_LIBRARY_PATH.
 2017-11-02 14:42:58 -04:00
Kei Kebreau 4dd137d508
gnu: libgweather: Update to 3.26.0. 
* gnu/packages/gnome.scm (libgweather): Update to 3.26.0.
 2017-11-02 12:05:03 -04:00
Julien Lepiller bb27eb0dbf
gnu: Add java-plexus-classworlds. 
* gnu/packages/java.scm (java-plexus-classworlds): New variable.
 2017-11-02 13:07:38 +01:00
Julien Lepiller 4d50897515
gnu: Add java-powermock-api-easymock. 
* gnu/packages/java.scm (java-powermock-api-easymock): New variable.
 2017-11-02 13:07:30 +01:00
Julien Lepiller 33db168181
gnu: Add java-powermock-modules-junit4. 
* gnu/packages/java.scm (java-powermock-modules-junit4): New variable.
 2017-11-02 13:07:27 +01:00
Julien Lepiller 6c21d46c70
gnu: Add java-powermock-modules-junit4-common. 
* gnu/packages/java.scm (java-powermock-modules-junit4-common): New
variable.
 2017-11-02 13:07:24 +01:00
Julien Lepiller 2d5d65d7dd
gnu: Add java-powermock-api-support. 
* gnu/packages/java.scm (java-powermock-api-support): New variable.
 2017-11-02 13:07:22 +01:00
Julien Lepiller d4a4d5da60
gnu: Add java-powermock-core. 
* gnu/packages/java.scm (java-powermock-core): New variable.
 2017-11-02 13:07:19 +01:00
Julien Lepiller 8d6a48150a
gnu: Add java-powermock-reflect. 
* gnu/packages/java.scm (java-powermock-reflect): New variable.
* gnu/packages/patches/java-powermock-fix-java-files.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-11-02 13:07:17 +01:00
Julien Lepiller 5619556b24
gnu: Add java-xerial-core. 
* gnu/packages/java.scm (java-xerial-core): New variable.
 2017-11-02 13:07:15 +01:00
Julien Lepiller a53d9ac0f2
gnu: Add java-lmax-disruptor. 
* gnu/packages/java.scm (java-lmax-disruptor): New variable.
 2017-11-02 13:07:12 +01:00
Julien Lepiller 3120836732
gnu: Add java-bouncycastle-bcpkix. 
* gnu/packages/java.scm (java-bouncycastle-bcpkix): New variable.
 2017-11-02 13:07:09 +01:00
Julien Lepiller 62315865df
gnu: Add java-bouncycastle-bcprov. 
* gnu/packages/java.scm (java-bouncycastle-bcprov): New variable.
 2017-11-02 13:07:07 +01:00
Julien Lepiller d54d7d31ac
gnu: Add java-lz4. 
* gnu/packages/java.scm (java-lz4): New variable.
 2017-11-02 13:07:04 +01:00
Julien Lepiller eaf3cb7a41
gnu: Add java-mvel2. 
* gnu/packages/java.scm (java-mvel2): New variable.
 2017-11-02 13:07:01 +01:00
Julien Lepiller 1717a7de7b
gnu: Add java-jnacl. 
* gnu/packages/java.scm (java-jnacl): New variable.
 2017-11-02 13:06:59 +01:00
Julien Lepiller 0442d897e9
gnu: Add java-testng. 
* gnu/packages/java.scm (java-testng): New variable.
 2017-11-02 13:06:56 +01:00
Julien Lepiller ca98e4481f
gnu: Add java-fest-assert. 
* gnu/packages/java.scm (java-fest-assert): New variable.
 2017-11-02 13:06:54 +01:00
Julien Lepiller 3c6c835806
gnu: Add java-fest-test. 
* gnu/packages/java.scm (java-fest-test): New variable.
 2017-11-02 13:06:51 +01:00
Julien Lepiller 7a343e971a
gnu: Add java-fest-util. 
* gnu/packages/java.scm (java-fest-util): New variable.
 2017-11-02 13:06:48 +01:00
Julien Lepiller e84b899d50
gnu: Add java-jmock-legacy. 
* gnu/packages/java.scm (java-jmock-legacy): New variable.
 2017-11-02 13:06:46 +01:00
Julien Lepiller 25436c6d03
gnu: Add java-jmock-junit4. 
* gnu/packages/java.scm (java-jmock-junit4): New variable.
 2017-11-02 13:06:43 +01:00
Julien Lepiller 045124ae2f
gnu: Add java-jmock. 
* gnu/packages/java.scm (java-jmock): New variable.
 2017-11-02 13:06:41 +01:00
Julien Lepiller 11bc385b7b
gnu: Add java-bsh. 
* gnu/packages/java.scm (java-bsh): New variable.
 2017-11-02 13:06:38 +01:00
Julien Lepiller a6dd06d0e2
gnu: Add java-jcommander. 
* gnu/packages/java.scm (java-jcommander): New variable.
 2017-11-02 13:06:19 +01:00
Kei Kebreau 2524a2a17a
gnu: five-or-more: Update to 3.26.0. 
* gnu/packages/gnome.scm (five-or-more): Update to 3.26.0.
 2017-11-02 07:36:58 -04:00
Efraim Flashner 30ee6bf5d2
gnu: dejagnu: Update to 1.6.1. 
* gnu/packages/dejagnu.scm (dejagnu): Update to 1.6.1.
 2017-11-02 13:12:15 +02:00
Oleg Pykhalov 50e3f2a5a4
gnu: emacs-helm-make: Update to 0.1.0-1.21c1bfa. 
* gnu/packages/emacs.scm (emacs-helm-make): Update to 0.1.0-1.21c1bfa.
 2017-11-02 11:05:46 +03:00
Eric Bavier a254971350
gnu: units: Add readline input. 
* gnu/packages/maths.scm (units)[inputs]: Add readline.
 2017-11-01 17:17:01 -05:00
Eric Bavier 0498d24866
gnu: units: Add python input. 
* gnu/packages/maths.scm (units)[inputs]: New field.
[arguments]: New field.  Add 'wrap-units_cur phase.
 2017-11-01 17:15:10 -05:00
Eric Bavier f11d2849a1
gnu: units: Update to 2.16. 
* gnu/packages/maths.scm (units): Update to 2.16.
 2017-11-01 17:11:15 -05:00
Kei Kebreau 55ed15baba
gnu: gnome-mines: Update to 3.26.0. 
* gnu/packages/gnome.scm (gnome-mines): Update to 3.26.0.
 2017-11-01 19:49:46 -04:00
Marius Bakke 88b35013b7
gnu: git: Update to 2.15.0. 
* gnu/packages/version-control.scm (git): Update to 2.15.0.
 2017-11-01 21:26:58 +01:00
Marius Bakke 61e1d6a791
gnu: imagemagick: Update to 6.9.9-21. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-21.
[home-page]: Use HTTPS.
 2017-11-01 21:26:50 +01:00
Marius Bakke 449ad88bb5
gnu: libass: Update to 0.14.0. 
* gnu/packages/video.scm (libass): Update to 0.14.0.
[native-inputs]: Change from YASM to NASM.
 2017-11-01 20:29:32 +01:00
Marius Bakke 5d7141cd28
tests: ssh: Make sure we can run executables from PATH. 
* gnu/tests/ssh.scm (run-ssh-test): Add tests for running commands in system
and user profile.
 2017-11-01 20:29:32 +01:00
Marius Bakke 2c16be569c
system: Return early in skeleton '.bashrc' when the shell is non-interactive. 
* gnu/system/shadow.scm (default-skeletons)[bashrc]: Add return statement.
 2017-11-01 20:29:32 +01:00
Marius Bakke 0ab59dd8b8
system: Test for interactive shell instead of `cat` in skeleton '.bashrc'. 
* gnu/system/shadow.scm (default-skeletons)[bashrc]: Wrap $SSH_CLIENT test in
a conditional testing for interactive shell.
 2017-11-01 20:29:32 +01:00
Marius Bakke 83a7a88f93
gnu: feh: Enable tests. 
* gnu/packages/image-viewers.scm (feh)[arguments]: Remove #:tests?.  Add
 #:test-target.
[native-inputs]: Add PERL and PERL-TEST-COMMAND.  New field.
 2017-11-01 20:29:32 +01:00
Marius Bakke 6b520156c2
gnu: Add perl-test-command. 
* gnu/packages/perl.scm (perl-test-command): New public variable.
 2017-11-01 20:29:32 +01:00
Efraim Flashner 5010d0e364
gnu: wine64: Add aarch64-linux to supported-systems. 
* gnu/packages/wine.scm (wine64)[supported-systems]: Add aarch64-linux.
 2017-11-01 10:17:18 +02:00
Ben Woodcroft 03d6e9dd08
gnu: vsearch: Update to 2.5.2. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.2.
 2017-11-01 10:57:05 +10:00
Ben Woodcroft e126b79736
gnu: diamond: Update to 0.9.11. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.11.
 2017-11-01 10:57:03 +10:00
Tobias Geerinckx-Rice e6ee13599d
gnu: libfilezilla: Update to 0.11.1. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.11.1.
 2017-11-01 01:02:04 +01:00
Tobias Geerinckx-Rice 9b5db24e7a
gnu: gnome-mpv: Update to 0.13. 
* gnu/packages/video.scm (gnome-mpv): Update to 0.13.
 2017-11-01 01:02:04 +01:00
Tobias Geerinckx-Rice 78ab71ce1d
gnu: you-get: Update to 0.4.939. 
* gnu/packages/video.scm (you-get): Update to 0.4.939.
 2017-11-01 01:02:03 +01:00
Leo Famulari bc8bd40e6a
gnu: ncmpcpp: Update to 0.8.1. 
* gnu/packages/mpd.scm (ncmpcpp): Update to 0.8.1.
 2017-10-31 18:13:53 -04:00
Oleg Pykhalov cd5c3979d1
gnu: Add emacs-ggtags. 
* gnu/packages/emacs.scm (emacs-ggtags): New variable.
 2017-10-31 20:08:00 +03:00
Kei Kebreau 90bf26088e
gnu: Add sakura. 
* gnu/packages/terminals.scm (sakura): New variable.
 2017-10-31 09:41:52 -04:00
Oleg Pykhalov 016590a951
gnu: Add emacs-company-quickhelp. 
* gnu/packages/emacs.scm (emacs-company-quickhelp): New variable.
 2017-10-31 14:55:18 +03:00
宋文武 56295c5160
gnu: lxc: Update to 2.1.1. 
* gnu/packages/virtualization.scm (lxc): Update to 2.1.1.
 2017-10-31 19:28:09 +08:00
Oleg Pykhalov 2e4bb8c817
gnu: Add emacs-helm-make. 
* gnu/packages/emacs.scm (emacs-helm-make): New variable.
 2017-10-31 14:10:37 +03:00
Ricardo Wurmus 7bf59f7021
gnu: Remove cufflinks. 
Cufflinks includes essential non-free code.
Fixes <https://bugs.gnu.org/28946>.

* gnu/packages/bioinformatics.scm (cufflinks): Remove variable.
 2017-10-31 08:17:06 +01:00
Leo Famulari b275cd22d4
gnu: apr-util: Update to 1.6.1 [fixes CVE-2017-12618]. 
* gnu/packages/apr.scm (apr): Update to 1.6.1.
 2017-10-30 21:46:18 -04:00
Leo Famulari b614c48017
gnu: apr: Update to 1.6.3 [fixes CVE-2017-12613]. 
* gnu/packages/apr.scm (apr): Update to 1.6.3.
 2017-10-30 21:46:18 -04:00
Leo Famulari 3022680aba
gnu: mpd: Update to 0.20.11. 
* gnu/packages/mpd.scm (mpd): Update to 0.20.11.
 2017-10-30 21:46:14 -04:00
Leo Famulari 44b8823fc7
gnu: quagga: Update to 1.2.2 [fix CVE-2017-16227]. 
* gnu/packages/networking.scm (quagga): Update to 1.2.2.
 2017-10-30 20:42:13 -04:00
Mark H Weaver 8b17ee4846
gnu: webkitgtk: Update to 2.18.2. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.2.
 2017-10-30 20:07:00 -04:00
Ludovic Courtès c2eb8cd98c
gnu: xorg-server: Build reproducibly. 
Fixes <https://bugs.gnu.org/24112>.

* gnu/packages/xorg.scm (xorg-server)[arguments]: Pass "--with-os-name"
and "--with-os-vendor" as #:configure-flags.
Augment 'pre-configure' phase to set 'BUILD_DATE' and 'BUILD_TIME' in
'configure'.
 2017-10-31 00:51:37 +01:00
Efraim Flashner 8ff5b8aaa3
gnu: perl-http-cookies: Fix source uri. 
This is a follow-up to d284f01826.

* gnu/packages/web.scm (perl-http-cookies)[source]: Update to new source uri.
 2017-10-30 19:49:37 +02:00
Tobias Geerinckx-Rice 484a1c05d0
gnu: ola: Update to 0.10.5. 
* gnu/packages/lighting.scm (ola): Update to 0.10.5.
 2017-10-30 17:20:43 +01:00
Tobias Geerinckx-Rice 59261ebeea
gnu: ethtool: Update to 4.13. 
* gnu/packages/networking.scm (ethtool): Update to 4.13.
 2017-10-30 17:20:42 +01:00
Tobias Geerinckx-Rice 2fb83ca6c5
gnu: perl-class-tiny: Update to 1.006. 
* gnu/packages/perl.scm (perl-class-tiny): Update to 1.006.
 2017-10-30 17:20:42 +01:00
Tobias Geerinckx-Rice 7e5132a297
gnu: perl-extutils-pkgconfig: Update to 1.16. 
* gnu/packages/perl.scm (perl-extutils-pkgconfig): Update to 1.16.
 2017-10-30 17:20:41 +01:00
Tobias Geerinckx-Rice 72ef03b92b
gnu: perl-json-any: Update to 1.39. 
* gnu/packages/perl.scm (perl-json-any): Update to 1.39.
 2017-10-30 17:20:41 +01:00
Tobias Geerinckx-Rice caa7adacce
gnu: perl-sub-exporter-progressive: Update to 0.001013. 
* gnu/packages/perl.scm (perl-sub-exporter-progressive): Update to 0.001013.
 2017-10-30 17:20:41 +01:00
Tobias Geerinckx-Rice 922814ae65
gnu: perl-html-lint: Update to 2.26. 
* gnu/packages/perl.scm (perl-html-lint): Update to 2.26.
 2017-10-30 17:20:40 +01:00
Tobias Geerinckx-Rice d284f01826
gnu: perl-http-cookies: Update to 6.04. 
* gnu/packages/perl.scm (perl-http-cookies): Update to 6.04.
 2017-10-30 17:20:40 +01:00
Tobias Geerinckx-Rice 58ade30228
gnu: perl-xml-libxml: Update to 2.0132. 
* gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0132.
 2017-10-30 17:20:07 +01:00
Rutger Helling faffd821f3
gnu: wine: Update to 2.0.3. 
* gnu/packages/wine.scm (wine): Update to 2.0.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-30 10:42:20 -04:00
ng0 8fd4320033
gnu: ffmpeg: Configure with frei0r. 
* gnu/packages/video.scm (ffmepg)[inputs]: Add 'frei0r-plugins'.
(arguments)[configure-flags]: Add '--enable-frei0r' and remove
'TODO' comment about frei0r.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-10-30 15:43:21 +02:00
ng0 49e1d76dd9
gnu: Add frei0r-plugins. 
* gnu/packages/video.scm (frei0r-plugins): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-10-30 15:43:21 +02:00
Ricardo Wurmus 1f6f4c40c1
gnu: Add r-tgconfig. 
* gnu/packages/statistics.scm (r-tgconfig): New variable.
 2017-10-30 12:07:53 +01:00
Ricardo Wurmus 7941d1ed5d
gnu: Add r-tgstat. 
* gnu/packages/statistics.scm (r-tgstat): New variable.
 2017-10-30 12:07:51 +01:00
Roel Janssen 491dc2fb16
gnu: java: Fix libjvm.so linkage problem in icedtea-7. 
* gnu/packages/java.scm (icedtea-7): Add phase to create a symbolic link to
  libjvm.so.
 2017-10-30 11:19:51 +01:00
Hartmut Goebel 91496dfc9a
tests: install: Estimate the installation system disk size. 
1500 MiB are too small for a current system, thus let
system-disk-image estimate the required size.

* gnu/tests/install.scm: (run-install): Pass "#:disk-image-size
  'guess" to system-disk-image.
 2017-10-30 09:12:56 +01:00
Efraim Flashner 73f71bc9b7
gnu: tig: Update to 2.3.0. 
* gnu/packages/version-control.scm (tig): Update to 2.3.0.
[source]: Download from Github.
[home-page]: Update to new home-page.
 2017-10-29 22:35:56 +02:00
Efraim Flashner 0c6f4bec2e
gnu: Add newsboat. 
* gnu/packages/syndication.scm (newsboat): New variable.
 2017-10-29 22:02:44 +02:00
Mark H Weaver f7ddf99696
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
 2017-10-29 15:29:18 -04:00
Ricardo Wurmus c9dc457711
gnu: mu: Add build phase to fix library reference. 
* gnu/packages/mail.scm (mu)[arguments]: Add build phase "fix-ffi" to fix
reference to libguile-mu library.
 2017-10-29 18:30:58 +01:00
Ricardo Wurmus d59ec12975
gnu: mu: Use Guile 2.2. 
* gnu/packages/mail.scm (mu)[inputs]: Replace guile-2.0 with guile-2.2.
[arguments]: Replace references to version 2.0.
 2017-10-29 18:30:58 +01:00
Tobias Geerinckx-Rice 8de54944f7
gnu: offlineimap: Update to 7.1.4. 
* gnu/packages/mail.scm (offlineimap): Update to 7.1.4.
 2017-10-29 17:32:39 +01:00
Tobias Geerinckx-Rice 8281f8263d
gnu: youtube-dl: Update to 2017.10.29. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.29.
 2017-10-29 17:32:39 +01:00
Tobias Geerinckx-Rice be03120d78
gnu: perl-test-www-mechanize-psgi: Update to 0.37. 
gnu/packages/web.scm (perl-test-www-mechanize-psgi): Update to 0.37.
 2017-10-29 17:32:38 +01:00
Tobias Geerinckx-Rice 303c68588a
gnu: perl-test-www-mechanize: Update to 1.48. 
gnu/packages/web.scm (perl-test-www-mechanize): Update to 1.48.
 2017-10-29 17:32:38 +01:00
Tobias Geerinckx-Rice c2d1b935e0
gnu: perl-uri-find: Update to 20160806. 
* gnu/packages/web.scm (perl-uri-find): Update to 20160806.
 2017-10-29 17:32:38 +01:00
Tobias Geerinckx-Rice 4f50fd752b
gnu: perl-email-mime: Update to 1.946. 
* gnu/packages/mail.scm (perl-email-mime): Update to 1.946.
[propagated-inputs]: Add perl-module-runtime.
 2017-10-29 17:32:37 +01:00
Tobias Geerinckx-Rice 9b5fc20c4e
gnu: perl-email-mime-contenttype: Update to 1.022. 
* gnu/packages/mail.scm (perl-email-mime-contenttype): Update to 1.022.
 2017-10-29 17:32:37 +01:00
Tobias Geerinckx-Rice 25adc0066a
gnu: perl-email-simple: Update to 2.214. 
* gnu/packages/mail.scm (perl-email-simple): Update to 2.214.
 2017-10-29 17:32:36 +01:00
Tobias Geerinckx-Rice 801eb74620
gnu: perl-email-sender: Update to 1.300031. 
* gnu/packages/mail.scm (perl-email-sender): Update to 1.300031.
 2017-10-29 17:32:36 +01:00
Tobias Geerinckx-Rice adce670797
gnu: perl-tie-cycle: Update to 1.225. 
* gnu/packages/perl.scm (perl-tie-cycle): Update to 1.225.
 2017-10-29 15:22:24 +01:00
Tobias Geerinckx-Rice ec4e2b24a7
gnu: perl-text-table: Update to 1.133. 
* gnu/packages/perl.scm (perl-text-table): Update to 1.133.
 2017-10-29 15:22:23 +01:00
Tobias Geerinckx-Rice c97dadcc97
gnu: perl-safe-isa: Update to 1.000008. 
* gnu/packages/perl.scm (perl-safe-isa): Update to 1.000008.
 2017-10-29 15:22:21 +01:00
Tobias Geerinckx-Rice 384dec0889
gnu: perl-log-log4perl: Update to 1.49. 
* gnu/packages/perl.scm (perl-log-log4perl): Update to 1.49.
 2017-10-29 15:22:20 +01:00
Tobias Geerinckx-Rice dbbc8f5a86
gnu: perl-file-sharedir-dist: Update to 0.05. 
* gnu/packages/perl.scm (perl-file-sharedir-dist): Update to 0.05.
 2017-10-29 15:22:19 +01:00
Tobias Geerinckx-Rice 37fcabf0ef
gnu: perl-business-ismn: Update to 1.131. 
* gnu/packages/perl.scm (perl-business-ismn): Update to 1.131.
 2017-10-29 15:22:17 +01:00
Tobias Geerinckx-Rice 6a2c510dc5
gnu: perl-net-dns: Update to 1.13. 
* gnu/packages/networking.scm (perl-net-dns): Update to 1.13.
 2017-10-29 15:22:16 +01:00
Jan Nieuwenhuizen 11e5e932ad
gnu: conkeror: Update to 1.1.0. 
* gnu/packages/conkeror.scm (conkeror): Update to 1.1.0.
 2017-10-29 11:21:12 +01:00
Nicolas Goaziou 53a3f5d792
gnu: giac-xcas: Update to 1.4.9-17. 
* gnu/packages/algebra.scm (giac-xcas): Update to 1.4.9-17.  Remove
  unnecessary workaround about failing test.
 2017-10-29 10:06:44 +01:00
Nicolas Goaziou 4a8bd5500d
gnu: scribus: Update to 1.5.3. Add inputs. 
* gnu/packages/scribus.scm (scribus): Update to 1.5.3.
[input]: Add fontconfig, harfbuzz, hunspell, icu4c, libcdr, libfreehand,
libmspub, librevenge, libvisio, openssl, podofo, poppler, and boost.  Move
qttools to ...
[native-input]: ... here.
[home-page]: Fix URL.

Co-authored-by: Eric Bavier <bavier@member.fsf.org>
 2017-10-29 09:09:56 +01:00
Eric Bavier 9de52b5643
gnu: perl-sys-cpu: Skip cpu_clock and cpu_type tests. 
* gnu/packages/perl.scm (perl-sys-cpu)[source]: Replace test in snippet.
 2017-10-28 18:20:58 -05:00
Mark H Weaver 0f27666b91
gnu: linux-libre: Update to 4.13.10. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.10.
(%linux-libre-hash): Update hash.
 2017-10-28 22:29:01 -04:00
Mark H Weaver 88deca15b5
gnu: linux-libre@4.9: Update to 4.9.59. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.59.
 2017-10-28 22:28:23 -04:00
Mark H Weaver 813b4454a8
gnu: linux-libre@4.4: Update to 4.4.95. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.95.
 2017-10-28 22:27:37 -04:00
Efraim Flashner c178aa344f
gnu: gavl: Fix building on armhf and aarch64. 
* gnu/packages/video.scm (gavl)[arguments]: Add '-lm' to configure flags.
 2017-10-28 23:11:12 +03:00
ng0 4b86f04a51
gnu: neomutt: Remove obsolete configure switches. 
* gnu/packages/mail.scm (neomutt)[arguments]: Remove '--with-regex'
and '--with-external-dotlock' from configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:54:42 +02:00
ng0 32fc1ec3d5
gnu: neomutt: Do not inherit mutt. 
* gnu/packages/mail.scm (neomutt): Remove (inherit mutt),
add 'build-system' and 'license'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:54:36 +02:00
ng0 7de23b02a1
gnu: neomutt: Update to 20171027. 
* gnu/packages/mail.scm (neomutt): Update to 20171027.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:54:25 +02:00
Kyle Meyer bf1264ab70
gnu: emacs-yasnippet: Update to 0.12.2. 
* gnu/packages/emacs.scm (emacs-yasnippet): Update to 0.12.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:52:31 +02:00
Kyle Meyer 8a0d454eed
gnu: emacs-elfeed: Update to 2.2.0. 
* gnu/packages/emacs.scm (emacs-elfeed): Update to 2.2.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:52:29 +02:00
Kyle Meyer 9932dabfb6
gnu: emacs-hydra: Update to 0.14.0. 
* gnu/packages/emacs.scm (emacs-hydra): Update to 0.14.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:52:25 +02:00
Kyle Meyer 2b0ddaaac7
gnu: emacs-f: Update to 0.19.0. 
* gnu/packages/emacs.scm (emacs-f): Update to 0.19.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:52:22 +02:00
Kyle Meyer 4e4255849d
gnu: emacs-s: Update to 1.12.0. 
* gnu/packages/emacs.scm (emacs-s): Update to 1.12.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 21:52:18 +02:00
Julien Lepiller c54a8fdf90
gnu: Update php to 7.1.11. 
* gnu/packages/php.scm (php): Update to 7.1.11.
 2017-10-28 14:19:15 +02:00
Peter Kreye 90ab26fa26
gnu: Add ocaml-utop. 
* gnu/packages/ocaml.scm (ocaml-utop): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 10:33:59 +02:00
Peter Kreye 50856b7342
gnu: Add ocaml-findlib-1.7.3. 
* gnu/packages/ocaml.scm (ocaml-findlib-1.7.3): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 10:33:46 +02:00
Peter Kreye e88ff71c10
gnu: Add ocaml-lambda-term. 
* gnu/packages/ocaml.scm (ocaml-zed): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 10:12:20 +02:00
Peter Kreye cd4abd293d
gnu: Add ocaml-zed. 
* gnu/packages/ocaml.scm (ocaml-zed): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 10:09:02 +02:00
Peter Kreye c00233ac16
gnu: Add ocaml-jbuilder. 
* gnu/packages/ocaml.scm (ocaml-jbuilder): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-28 10:00:09 +02:00
Tobias Geerinckx-Rice ed1f071e98
gnu: perl-net-dns: Update to 1.13. 
* gnu/packages/networking.scm (perl-net-dns): Update to 1.13.
 2017-10-28 01:55:26 +02:00
Tobias Geerinckx-Rice e13a63d933
gnu: perl-xml-libxml: Update to 2.0131. 
* gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0131.
 2017-10-28 01:55:26 +02:00
Theodoros Foradis 50942a690e
gnu: kicad: Build with ngspice support. 
* gnu/packages/engineering.scm (kicad):
[arguments] <configure-flags>: Add KICAD_SPICE flag.
[inputs]: Add libngspice.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-27 13:03:39 -07:00
Theodoros Foradis c48799c0a5
gnu: kicad: Update to commit 5f4599f. 
* gnu/packages/engineering.scm (kicad): Update to commit 5f4599f.
[arguments]: Add "install-lib-3d" phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-27 13:03:18 -07:00
Theodoros Foradis c16fabfa9e
gnu: kicad-library: Update to 4.0.6. 
* gnu/packages/engineering.scm (kicad-library): Update to 4.0.6.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-27 13:00:39 -07:00
Theodoros Foradis c31b61ef53
gnu: Add qucs. 
* gnu/packages/engineering.scm (qucs): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-27 12:42:49 -07:00
Ludovic Courtès 40a99ca014
gnu: freehdl: Depend on the current 'gcc-toolchain'. 
* gnu/packages/engineering.scm (freehdl)[inputs]: Change
'gcc-toolchain-5' to 'gcc-toolchain'.
 2017-10-27 12:37:38 -07:00
Ludovic Courtès b887ede17d
gnu: gcc: Add unversioned 'gcc-toolchain' variable. 
Reported by Theodoros Foradis <theodoros@foradis.org>.

* gnu/packages/commencement.scm (gcc-toolchain): Rename to...
(make-gcc-toolchain): ... this.
(gcc-toolchain): New variable.
(gcc-toolchain-5): Turn into an alias for 'gcc-toolchain'.
 2017-10-27 12:35:49 -07:00
Ludovic Courtès 99b9857be7
gnu: Add Catalan dictionary for Aspell. 
Hola!

* gnu/packages/aspell.scm (aspell-dict-ca): New variable.
 2017-10-27 11:57:47 -07:00
Ludovic Courtès 085bcca313
gnu: Add hunspell-dict-en*. 
* gnu/packages/aspell.scm (aspell-word-list): New procedure.
(define-word-list-dictionary): New macro.
(hunspell-dict-en, hunspell-dict-en-au, hunspell-dict-en-ca)
(hunspell-dict-en-gb, hunspell-dict-en-gb-ize, hunspell-dict-en-us): New
variables.
 2017-10-27 09:33:15 -07:00
Theodoros Foradis d3f9589842
gnu: freehdl: Fix gvhdl and freehdl-gennodes scripts. 
* gnu/packages/engineering.scm (freehdl):
[arguments] <phases>: Add patch-gvhdl and patch-freehdl-gennodes phases.
Wrap-program "/bin/gvhdl" in make-wrapper phase.
[inputs]: Add guile-2.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-27 09:33:15 -07:00
ng0 e37bdc0f28
gnu: Add gavl. 
* gnu/packages/video.scm (gavl): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-10-27 08:25:55 -04:00
ng0 c50fe6c291
gnu: Add python-pycanberra. 
* gnu/packages/libcanberra.scm (python-pycanberra): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-10-27 08:25:55 -04:00
ng0 635f981b9a
gnu: Add gst-transcoder. 
* gnu/packages/video.scm (gst-transcoder): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-10-27 08:25:54 -04:00
Roel Janssen 58a308e0b4
gnu: Add gwl. 
* gnu/packages/package-management.scm (gwl): New variable.
 2017-10-27 11:17:43 +02:00
Marius Bakke 4119376d66
gnu: exiv2: Add upstream security fixes. 
Fixes CVE-2017-14859, CVE-2017-14860, CVE-2017-14862 and CVE-2017-14864.

* gnu/packages/patches/exiv2-CVE-2017-14859-14862-14864.patch,
gnu/packages/patches/exiv2-CVE-2017-14860.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/image.scm (exiv2)[source]: Use them.
 2017-10-27 00:50:09 +02:00
Maxim Cournoyer ba2cd6c2d8
gnu: synergy: Update repository URI and hash. 
* gnu/packages/synergy.scm (synergy)[uri]: Replace synergy by synergy-core.
[sha256]: Update to reflect the name change of the archive root directory.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-26 15:45:14 -07:00
Kyle Meyer 3414ce9876
gnu: snakemake: Update to 4.2.0. 
* gnu/packages/python.scm (snakemake): Update to 4.2.0.
[propagated-inputs]: Add python-appdirs, python-configargparse, python-pyyaml,
and python-ratelimiter, which are dependencies as of Snakemake 4.1.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-10-27 00:42:06 +02:00
Kyle Meyer 9d0866ce1b
gnu: Add python-ratelimiter. 
* gnu/packages/python.scm (python-ratelimiter, python2-ratelimiter): New
variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-10-27 00:42:06 +02:00
Kyle Meyer b89e3c77c6
gnu: python-configargparse: Update to 0.12.0. 
* gnu/packages/python.scm (python-configargparse, python2-configargparse):
Update to 0.12.0.
[arguments]: Enable tests.
[native-inputs]: Add python-pyyaml, which is an optional dependency but
required to run the tests.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-10-27 00:42:06 +02:00
Rutger Helling 750e9f15a3
gnu: xpra: Update to 2.1.3. 
* gnu/packages/xorg.scm (xpra): Update to 2.1.3.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-10-27 00:42:06 +02:00
Jelle Licht 256ecba1a1
gnu: ansible: Update to 2.4.1.0. 
* gnu/packages/admin.scm (ansible): Update to 2.4.1.0.
 2017-10-27 00:30:49 +02:00
Marius Bakke 1c2adcd6b9
gnu: ffmpeg@3.3: Update to 3.3.5. 
* gnu/packages/video.scm (ffmpeg-3.3): Update to 3.3.5.
 2017-10-27 00:03:17 +02:00
Rutger Helling b1c01503df
gnu: Add ffmpeg@3.3 and use it on packages that fail with 3.4. 
* gnu/packages/gstreamer.scm (gst-libav)[inputs]: Change ffmpeg to ffmpeg-3.3.
* gnu/packages/messaging.scm (qtox)[inputs]: Change ffmpeg to ffmpeg-3.3.
* gnu/packages/video.scm (ffmpeg-3.3): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-10-27 00:01:53 +02:00
Marius Bakke 6b88912eb6
gnu: wget: Update to 1.19.2 [fixes CVE-2017-13089 and CVE-2017-13090]. 
* gnu/packages/wget.scm (wget): Update to 1.19.2.
[source](uri): Change to '.lz' tarball.
[source](patches): Remove.
[native-inputs]: Add LZIP.
* gnu/packages/patches/wget-CVE-2017-6508.patch,
gnu/packages/patches/wget-fix-504-test-timeout.patch,
gnu/packages/patches/wget-perl-5.26.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-10-26 23:45:17 +02:00
Rutger Helling 2e205c6193
gnu: openrct2: Fix a few paths. 
* gnu/packages/games.scm (openrct2): Fix a few paths.
 2017-10-26 20:07:50 +02:00
Leo Famulari 0cbcab7254
gnu: go: Update to 1.9.2. 
* gnu/packages/golang.scm (go-1.9): Update to 1.9.2.
 2017-10-26 12:14:33 -04:00
Rutger Helling 436594ca47
gnu: ffmpeg: Update to 3.4. 
* gnu/packages/video.scm (ffmpeg): Update to 3.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-26 12:14:30 -04:00
Jelle Licht bc709e0377
gnu: node: Update to 8.7.0. 
* gnu/packages/node.scm (node): Update to 8.7.0.
(node)[arguments]: Removed dgram mutlicast test. Removed dns test. Removed
broken linter test workaround.
 2017-10-26 12:57:43 +02:00
Ben Woodcroft ed5e9a33f8
gnu: vsearch: Update to 2.5.1. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.1.
 2017-10-26 19:55:29 +10:00
Efraim Flashner 8ba3f751b6
gnu: r-nloptr: Update package hash. 
The source was repacked and reuploaded without incrementing the version
number. The difference was windows line endings on the windows files.

* gnu/packages/statistics.scm (r-nloptr)[source]: Update package hash.
 2017-10-26 10:46:02 +03:00
Efraim Flashner e5af1f4af3
gnu: sorcer: Fix building on non-Intel hardware. 
* gnu/packages/music.scm (sorcer)[arguments]: Add phase to remove
architecture specific build flags.
 2017-10-26 08:37:40 +03:00
Andy Patterson b1e9837a3c
gnu: virt-manager: Enable persistent configuration support. 
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add dconf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
Andy Patterson f023685dca
gnu: virt-manager: Wrap with GSettings schema and GIO modules search paths. 
Fixes a crash when opening the file chooser dialog.

* gnu/packages/virtualization.scm (virt-manager)[arguments]
<#:imported-modules>: Add (guix build glib-or-gtk-build-system).
<#:modules>: Import (guix build glib-or-gtk-build-system) as glib-or-gtk:.
<#:arguments>: Add 'glib-or-gtk-compile-schemas and 'glib-or-gtk-wrap.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
ng0 60e9529729
gnu: Add python2-roca-detect. 
* gnu/packages/crypto.scm (python2-roca-detect): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:26:15 -07:00
ng0 7756eab078
gnu: Add python2-pgpdump. 
* gnu/packages/gnupg.scm (python2-pgpdump): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:57 -07:00
ng0 0046309398
gnu: Add python-coloredlogs. 
* gnu/packages/python.scm (python-coloredlogs, python2-coloredlogs): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:20 -07:00
ng0 7d4147634b
gnu: Add python-verboselogs. 
* gnu/packages/python.scm (python-verboselogs, python2-verboselogs): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:20 -07:00
ng0 2a81537f2f
gnu: Add python-capturer. 
* gnu/packages/python.scm (python-capturer, python2-capturer): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:19 -07:00
ng0 92eb9a3535
gnu: Add python-humanfriendly. 
* gnu/packages/python.scm (python-humanfriendly, python2-humanfriendly):
New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-25 22:25:19 -07:00
Leo Famulari 17650569d4
gnu: Fix Leo Famulari's copyright statement in (gnu packages calcurse). 
* gnu/packages/calcurse.scm: Fix copyright statement.
 2017-10-25 14:45:43 -04:00
Leo Famulari a23dbbff14
gnu: calcurse: Used the "fixed" test-only tzdata for tests. 
* gnu/packages/calcurse.scm (calcurse)[inputs]: Remove tzdata and add ...
[native-inputs]: tzdata-2017a.
[arguments]: Add tzdata-2017a to #:disallowed-references.
 2017-10-25 14:44:38 -04:00
Efraim Flashner c4b542ffd4
gnu: parallel: Update to 20171022. 
* gnu/packages/parallel.scm (parallel): Update to 20171022.
 2017-10-25 21:37:53 +03:00
Tobias Geerinckx-Rice 63bbf38fb1
gnu: expat: Update replacement to 2.2.4 [security fixes]. 
See 'Changes' in the source distribution for more information about the
fixed security issues.

* gnu/packages/xml.scm (expat)[replacement]: Update to 2.2.4.
(expat-2.2.2): Replace with...
(expat-2.2.4): ...new variable.
 2017-10-25 19:06:37 +02:00
Tobias Geerinckx-Rice c61cac6902
gnu: tor: Update to 0.3.1.8. 
* gnu/packages/tor.scm (tor): Update to 0.3.1.8.
 2017-10-25 18:13:09 +02:00
Tobias Geerinckx-Rice 65808ba4ec
gnu: sssd: Add missing word to description. 
* gnu/packages/sssd.scm (sssd)[description]: Fix typo.
 2017-10-25 18:13:08 +02:00
Tobias Geerinckx-Rice 06c1304652
gnu: sssd: Update to 1.16.0. 
* gnu/packages/sssd.scm (sssd): Update to 1.16.0.
 2017-10-25 18:13:08 +02:00
Tobias Geerinckx-Rice 3d96f2320a
gnu: ding-libs: Update to 0.6.1. 
* gnu/packages/sssd.scm (ding-libs): Update to 0.6.1.
 2017-10-25 18:13:08 +02:00
Efraim Flashner a6e67d867c
gnu: r-ff: Remove aarch64-linux from supported-systems. 
* gnu/packages/cran.scm (r-ff)[supported-systems]: New field.
 2017-10-25 19:07:11 +03:00
Efraim Flashner dda785f660
gnu: go@1.4: Limit supported systems. 
* gnu/packages/golang.scm (go@1.4)[supported-systems]: New field,
Limit supported systems to x86_64-linux, i686-linux and armhf-linux.
(go@1.9)[supported-systems]: New field.
 2017-10-25 19:07:10 +03:00
Ricardo Wurmus c633b911ce
gnu: perl-moox-file-configdir: Fix source URL. 
* gnu/packages/perl.scm (perl-moox-file-configdir)[source]: Fix typo in source
URL.
 2017-10-25 16:40:09 +02:00
Kyle Meyer 4c77abc4da
gnu: Add r-forcats. 
* gnu/packages/statistics.scm (r-forcats): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 16:24:03 +02:00
Ricardo Wurmus 6a23c8b183
gnu: Add sqlite-with-fts3. 
* gnu/packages/databases.scm (sqlite-with-fts3): New variable.

Co-authored-by: Pierre Langlois <pierre.langlois@gmx.com>
 2017-10-25 15:13:38 +02:00
Pierre Langlois de98f4ed55
gnu: Add crypto++. 
* gnu/packages/crypto.scm (crypto++): New variable.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:13 +02:00
Pierre Langlois 60b7ed9cb8
gnu: Add libechonest. 
* gnu/packages/music.scm (libechonest): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:13 +02:00
Pierre Langlois 412d00728e
gnu: Add qjson. 
* gnu/packages/web.scm (qjson): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 14:54:09 +02:00
Petter 15b0844257
gnu: Add parcimonie. 
* gnu/packages/gnupg.scm (parcimonie): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter 985c41458d
gnu: Add perl-browser-open. 
* gnu/packages/perl.scm (perl-browser-open): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter 65f7f60693
gnu: Add perl-b-keywords. 
* gnu/packages/perl.scm (perl-b-keywords): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter 2a013d0f09
gnu: Add perl-carp-always. 
* gnu/packages/perl.scm (perl-carp-always): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter fc4083c54f
gnu: Add perl-net-dbus-glib. 
* gnu/packages/glib.scm (perl-net-dbus-glib): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:38 +02:00
Petter a372c4da2f
gnu: Add perl-net-dbus. 
* gnu/packages/glib.scm (perl-net-dbus): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-25 10:49:37 +02:00
Eric Bavier 24404eaf93
gnu: dealii: Update to 8.5.1. 
Fixes compilation with boost@1.64.0.

* gnu/packages/maths.scm (dealii): Update to 8.5.1.
 2017-10-24 20:16:50 -05:00
Eric Bavier 4150da630f
gnu: p4est: Update to 2.0. 
* gnu/packages/maths.scm (p4est): Update to 2.0.
 2017-10-24 20:16:50 -05:00
Eric Bavier 9ce587f231
gnu: libhilbert: Remove package. 
This package's source and webpage has disappeared for some time, and upstream
projects (e.g. libmesh) seem to be bundling it, so we remove it for now.

* gnu/packages/maths.scm (libhilbert): Remove variable.
 2017-10-24 20:16:49 -05:00
Eric Bavier 958b5a1caa
gnu: slepc: Update to 3.8.0. 
* gnu/packages/maths.scm (slepc): Update to 3.8.0.
 2017-10-24 20:16:49 -05:00
Eric Bavier 6fec298d3e
gnu: petsc: Update to 3.8.0. 
* gnu/packages/maths.scm (petsc): Update to 3.8.0
[native-inputs]: Remove perl, which is no longer needed.
 2017-10-24 20:16:42 -05:00
Ben Woodcroft 6f141eff47
gnu: bwa: Update to 0.7.17. 
* gnu/packages/bioinformatics.scm (bwa): Update to 0.7.17.
 2017-10-25 09:29:22 +10:00
Ben Woodcroft ae6e00f6f9
gnu: bwa: Change source URL to GitHub. 
* gnu/packages/bioinformatics.scm (bwa)[source]: Change source URL to
GitHub.
 2017-10-25 09:29:22 +10:00
Petter 85c991b029
gnu: Add perl-moox-options. 
* gnu/packages/perl.scm (perl-moox-options): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:25 +02:00
Ricardo Wurmus 68998abd4f
gnu: perl-getopt-long-descriptive: Update to 0.100. 
* gnu/packages/perl.scm (perl-getopt-long-descriptive): Update to 0.100.
[native-inputs]: Add perl-cpan-meta-check.
 2017-10-24 23:30:24 +02:00
Petter b936ddf312
gnu: Add perl-moox-configfromfile. 
* gnu/packages/perl.scm (perl-moox-configfromfile): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter 8df39f572c
gnu: Add perl-moox-file-configdir. 
* gnu/packages/perl.scm (perl-moox-file-configdir): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Petter 658a4976fa
gnu: Add perl-moox-cmd. 
* gnu/packages/perl.scm (perl-moox-cmd): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus b547ef1d09
gnu: perl-list-moreutils: Update to 0.426. 
* gnu/packages/perl.scm (perl-list-moreutils): Update to 0.426.
[arguments]: Work around dotless @INC problem.
[native-inputs]: Add perl-test-leaktrace; remove perl-inc-latest and
perl-test-writevariants.
[propagated-inputs]: Add perl-list-moreutils-xs.
 2017-10-24 23:30:24 +02:00
Ricardo Wurmus 189bfb1112
gnu: Add perl-list-moreutils-xs. 
* gnu/packages/perl.scm (perl-list-moreutils-xs): New variable.
 2017-10-24 23:30:24 +02:00
Petter 544dc8d46b
gnu: Add perl-libintl-perl. 
* gnu/packages/perl.scm (perl-libintl-perl): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter 180411e3f4
gnu: Add perl-file-configdir. 
* gnu/packages/perl.scm (perl-file-configdir): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter 987232e67d
gnu: Add perl-data-record. 
* gnu/packages/perl.scm (perl-data-record): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter 8dca3bde0e
gnu: Add perl-data-printer. 
* gnu/packages/perl.scm (perl-data-printer): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter 857d75388b
gnu: Add perl-clone-pp. 
* gnu/packages/perl.scm (perl-clone-pp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
Petter 0de1e5e557
gnu: Add perl-data. 
* gnu/packages/perl.scm (perl-data): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 23:30:23 +02:00
ng0 6bf249211d
gnu: gnurl: Update to 7.56.1. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.56.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-24 17:19:15 -04:00
Efraim Flashner 648c896ad3
gnu: screen: Update to 4.6.2. 
* gnu/packages/screen.scm (screen): Update to 4.6.2.
 2017-10-24 21:26:19 +03:00
Leo Famulari ae7e24c421
gnu: mupdf: Fix CVE-2017-{14685,14686,14687}. 
* gnu/packages/patches/mupdf-CVE-2017-14685.patch,
gnu/packages/patches/mupdf-CVE-2017-14686.patch,
gnu/packages/patches/mupdf-CVE-2017-14687.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
 2017-10-24 13:44:34 -04:00
Leo Famulari 6dcc8239be
gnu: icu4c: Fix CVE-2017-14952. 
* gnu/packages/patches/icu4c-CVE-2017-14952.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/icu4c.scm (icu4c)[replacement]: New field.
(icu4c-fixed): New variable.
 2017-10-24 13:10:35 -04:00
Leo Famulari c330c27f7f
gnu: syncthing: Split into two outputs. 
* gnu/packages/syncthing.scm (syncthing)[outputs]: New field.
[arguments]: Change the 'install' and 'install-docs' phases to install to the
two outputs.
 2017-10-24 13:10:35 -04:00
Leo Famulari 1899ef0b83
gnu: syncthing: Use install-source? to disable installing the source code. 
* gnu/packages/syncthing.scm (syncthing): Set #:install-source? #f
instead of deleting the install-source phase.
 2017-10-24 13:10:35 -04:00
Petter 22473f6964
gnu: Add perl-types-path-tiny. 
* gnu/packages/perl.scm (perl-types-path-tiny): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter 35aaf4b1bd
gnu: Add perl-type-tiny-xs. 
* gnu/packages/perl.scm (perl-type-tiny-xs): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter 237edb6d1f
gnu: Add perl-test-taint. 
* gnu/packages/perl.scm (perl-test-taint): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter cb2f48e7f2
gnu: Add perl-term-size-any. 
* gnu/packages/perl.scm (perl-term-size-any): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter fcbc997e03
gnu: Add perl-term-size-perl. 
* gnu/packages/perl.scm (perl-term-size-perl): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:32 +02:00
Petter a1798ee3c7
gnu: Add perl-devel-hide. 
* gnu/packages/perl.scm (perl-devel-hide): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter 8ae0558aad
gnu: Add perl-sort-naturally. 
* gnu/packages/perl.scm (perl-sort-naturally): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter b6cd89084d
gnu: Add perl-proc-invokeeditor. 
* gnu/packages/perl.scm (perl-proc-invokeeditor): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Petter b44ecca691
gnu: Add perl-archive-extract. 
* gnu/packages/compression.scm (perl-archive-extract): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 18:38:31 +02:00
Ricardo Wurmus 5aeb661134
gnu: Add perl-gnupg-interface. 
* gnu/packages/gnupg.scm (perl-gnupg-interface): New variable.

Co-authored-by: Petter <petter@mykolab.ch>
 2017-10-24 18:38:31 +02:00
Leo Famulari 6ee4fd2ae1
gnu: borg: Split up the monolithic man page. 
* gnu/packages/backup.scm (borg)[arguments]: Rewrite 'install-docs'
phase to install one man page per Borg sub-command.
 2017-10-24 10:21:51 -04:00
Leo Famulari db4411b42b
gnu: python-docutils: Update to 0.14. 
* gnu/packages/python.scm (python-docutils, python2-docutils): Update to 0.14.
 2017-10-24 10:21:51 -04:00
Petter 85f225fbf7
gnu: Add perl-xml-twig. 
* gnu/packages/xml.scm (perl-xml-twig): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 10:40:49 +02:00
Marius Bakke 91f2daa58d
gnu: curl: Update replacement to 7.56.1 [fixes CVE-2017-1000257]. 
* gnu/packages/curl.scm (curl-7.56.0): Rename to ...
(curl-7.56.1): ... this.  Update to 7.56.1.
(curl)[replacement]: Adjust accordingly.
 2017-10-24 08:09:47 +02:00
Danny Milosavljevic fc9a93cbf9
gnu: claws-mail: Re-enable vcalendar. 
* gnu/packages/mail.scm (claws-mail): Use module (gnu packages calendar).
[inputs]: Add libical.
 2017-10-24 08:07:24 +02:00
Marius Bakke 62d48234e2
gnu: git: Update to 2.14.3. 
* gnu/packages/version-control.scm (git): Update to 2.14.3.
 2017-10-24 07:55:34 +02:00
Ricardo Wurmus 306556528e
gnu: Add sorcer. 
* gnu/packages/music.scm (sorcer): New variable.
 2017-10-24 07:54:43 +02:00
Ricardo Wurmus 2809a355b6
gnu: Add papagayo. 
* gnu/packages/animation.scm (papagayo): New variable.
 2017-10-24 07:54:43 +02:00
Petter 7a04dddd26
gnu: Add perl-html-tidy. 
* gnu/packages/web.scm (perl-html-tidy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:06:21 +02:00
Petter 0a9bdd9583
gnu: Add tidyp. 
* gnu/packages/web.scm (tidyp): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:06:20 +02:00
Petter efc8f7d03d
gnu: Add perl-lwp-online. 
* gnu/packages/web.scm (perl-lwp-online): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:05:28 +02:00
Petter 9e88b210f6
gnu: Add perl-xml-handler-yawriter. 
* gnu/packages/xml.scm (perl-xml-handler-yawriter): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:15 +02:00
Petter 33b592eed3
gnu: Add perl-xml-sax-writer. 
* gnu/packages/xml.scm (perl-xml-sax-writer): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:15 +02:00
Petter b7c5919514
gnu: Add perl-xml-filter-buffertext. 
* gnu/packages/xml.scm (perl-xml-filter-buffertext): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:14 +02:00
Petter 9e1c358139
gnu: Add perl-tree-xpathengine. 
* gnu/packages/xml.scm (perl-tree-xpathengine): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:14 +02:00
Petter 3b6958021d
gnu: Add perl-xml-xpathengine. 
* gnu/packages/xml.scm (perl-xml-xpathengine): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-24 00:04:14 +02:00
Julien Lepiller 6768e0a7a5
gnu: Add java-jboss-javassist. 
* gnu/packages/java.scm (java-jboss-javassist): New variable.
 2017-10-23 22:55:29 +02:00
Julien Lepiller b12fe1e517
gnu: Add java-assertj. 
* gnu/packages/java.scm (java-assertj): New variable.
 2017-10-23 22:55:25 +02:00
Julien Lepiller ec4e8ad724
gnu: Add java-guice-servlet. 
* gnu/packages/java.scm (java-guice-servlet): New variable.
 2017-10-23 22:55:21 +02:00
Julien Lepiller 5766984b06
gnu: Add java-guice. 
* gnu/packages/java.scm (java-guice): New variable.
 2017-10-23 22:55:18 +02:00
Julien Lepiller 454536e0ce
gnu: Add java-javax-inject. 
* gnu/packages/java.scm (java-javax-inject): New variable.
 2017-10-23 22:55:14 +02:00
Julien Lepiller 5d104a2756
gnu: Add java-aopalliance. 
* gnu/packages/java.scm (java-aopalliance): New variable.
 2017-10-23 22:55:12 +02:00
Julien Lepiller 213bb98180
gnu: Add java-eclipse-jetty-servlet-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-servlet-9.2): New variable.
 2017-10-23 22:55:09 +02:00
Julien Lepiller fb680f88e9
gnu: Add java-eclipse-jetty-servlet. 
* gnu/packages/web.scm (java-eclipse-jetty-servlet): New variable.
 2017-10-23 22:55:07 +02:00
Julien Lepiller fa2a23a146
gnu: Add java-eclipse-jetty-security-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-security-9.2): New variable.
 2017-10-23 22:55:04 +02:00
Julien Lepiller 8528e20dff
gnu: Add java-eclipse-jetty-security. 
* gnu/packages/web.scm (java-eclipse-jetty-security): New variable.
 2017-10-23 22:55:02 +02:00
Julien Lepiller e36e2bee46
gnu: Add java-eclipse-jetty-server-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-server-9.2): New variable.
 2017-10-23 22:54:58 +02:00
Julien Lepiller 5d38f7e4e8
gnu: Add java-eclipse-jetty-server. 
* gnu/packages/web.scm (java-eclipse-jetty-server): New variable.
 2017-10-23 22:54:56 +02:00
Julien Lepiller 812c712f7a
gnu: Add java-eclipse-jetty-jmx-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-jmx-9.2): New variable.
 2017-10-23 22:54:52 +02:00
Julien Lepiller 4b172061e5
gnu: Add java-eclipse-jetty-jmx. 
* gnu/packages/web.scm (java-eclipse-jetty-jmx): New variable.
 2017-10-23 22:54:49 +02:00
Julien Lepiller 821869fcf4
gnu: Add java-eclipse-jetty-http-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-http-9.2): New variable.
 2017-10-23 22:54:47 +02:00
Julien Lepiller 4a1376d3fd
gnu: Add java-eclipse-jetty-http. 
* gnu/packages/web.scm (java-eclipse-jetty-http): New variable.
 2017-10-23 22:54:45 +02:00
Julien Lepiller b90012fddf
gnu: Add java-eclipse-jetty-io-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-io-9.2): New variable.
 2017-10-23 22:54:42 +02:00
Julien Lepiller b510b7f58f
gnu: Add java-eclipse-jetty-io. 
* gnu/packages/web.scm (java-eclipse-jetty-io): New variable.
 2017-10-23 22:54:40 +02:00
Julien Lepiller 5010671d4d
gnu: Add java-eclipse-jetty-util-9.2. 
* gnu/packages/web.scm (java-eclipse-jetty-util-9.2): New variable.
 2017-10-23 22:54:38 +02:00
Julien Lepiller 1657d62ae5
gnu: Add java-eclipse-jetty-util. 
* gnu/packages/web.scm (java-eclipse-jetty-util): New variable.
 2017-10-23 22:54:35 +02:00
Julien Lepiller 1f985e4497
gnu: Add java-eclipse-jetty-perf-helper. 
* gnu/packages/web.scm (java-eclipse-jetty-perf-helper): New variable.
 2017-10-23 22:54:33 +02:00
Julien Lepiller 339bef37cd
gnu: Add java-eclipse-jetty-test-helper. 
* gnu/packages/web.scm (java-eclipse-jetty-test-helper): New variable.
 2017-10-23 22:54:30 +02:00
Julien Lepiller 91072287a6
gnu: Add java-tomcat. 
* gnu/packages/web.scm (java-tomcat): New variable.
 2017-10-23 22:54:27 +02:00
Julien Lepiller 90a127c7ed
gnu: Add java-hdrhistogram. 
* gnu/packages/web.scm (java-hdrhistogram): New variable.
 2017-10-23 22:54:12 +02:00
Danny Milosavljevic 1a6497dee4
gnu: Add python2-libmpsse. 
* gnu/packages/embedded.scm: Add imports.
(python2-libmpsse): New variable.
 2017-10-23 19:11:19 +02:00
Tobias Geerinckx-Rice cc14a90fd3
gnu: borg: Update to 1.1.1. 
* gnu/packages/backup.scm (borg): Update to 1.1.1.
 2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice 57af0d13b2
gnu: python-lmdb: Update to 0.93. 
* gnu/packages/databases.scm (python-lmdb): Update to 0.93.
 2017-10-23 14:49:32 +02:00
Tobias Geerinckx-Rice afd845368a
gnu: python-peewee: Update to 2.10.2. 
* gnu/packages/databases.scm (python-peewee): Update to 2.10.2.
 2017-10-23 14:49:31 +02:00
Tobias Geerinckx-Rice 6a4ad78dd6
gnu: python-graphviz: Update to 0.8.1. 
* gnu/packages/graphviz.scm (python-graphviz): Update to 0.8.1.
 2017-10-23 14:49:31 +02:00
Tobias Geerinckx-Rice 2b1b27990b
gnu: python-graphene: Disable tests. 
* gnu/packages/python.scm (python-graphene)[native-inputs]: Remove.
[arguments]: Disable #:tests.
 2017-10-23 14:49:30 +02:00
Tobias Geerinckx-Rice f737d9f2fb
gnu: python-pytest-django: Use python-pytest@3. 
* gnu/packages/django.scm (python-pytest-django)[propagated-inputs]: Replace
python-pytest with python-pytest-3.0.
 2017-10-23 14:49:30 +02:00
Tobias Geerinckx-Rice ce4dfde0d8
gnu: miso: Update to 0.5.4. 
* gnu/packages/bioinformatics.scm (miso): Update to 0.5.4.
 2017-10-23 14:49:29 +02:00
Efraim Flashner 1ee3079d78
gnu: cowsay: Run tests after install. 
* gnu/packages/games.scm (cowsay)[arguments]: Delete 'check phase, add
custom 'check phase after install.
 2017-10-23 11:44:17 +03:00
Efraim Flashner 3bf94bc8bc
gnu: criu: Add missing perl input. 
* gnu/packages/virtualization.scm (criu)[native-inputs]: Add perl.
 2017-10-23 09:50:33 +03:00
Ricardo Wurmus fe420383e1
gnu: Add criu. 
* gnu/packages/virtualization.scm (criu): New variable.
 2017-10-23 08:09:05 +02:00
Ricardo Wurmus de5308f526
gnu: Add libnet. 
* gnu/packages/networking.scm (libnet): New variable.
 2017-10-23 08:09:05 +02:00
Ludovic Courtès d298c815e6
gexp: Add 'directory-union'. 
* gnu/services.scm (directory-union): Move to...
* guix/gexp.scm (directory-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
 2017-10-22 22:09:00 -07:00
Ludovic Courtès dedb512f8f
gexp: Add 'file-union'. 
* gnu/services.scm (file-union): Move to...
* guix/gexp.scm (file-union): ... here.  New procedure.
* doc/guix.texi (G-Expressions): Document it.
 2017-10-22 22:09:00 -07:00
Maxim Cournoyer 6e644cfdb3
services: base: Add file->udev-rule function. 
This function allows passing a file-like object to the udev service.

* gnu/services/base.scm (file->udev-rule): New function.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 22:09:00 -07:00
Mark H Weaver 2f05dd6b4c
gnu: linux-libre: Update to 4.13.9. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.9.
(%linux-libre-hash): Update hash.
 2017-10-23 00:53:38 -04:00
Mark H Weaver 1b635cafac
gnu: linux-libre@4.9: Update to 4.9.58. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.58.
 2017-10-23 00:53:03 -04:00
Mark H Weaver 8e4a976c68
gnu: linux-libre@4.4: Update to 4.4.94. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.94.
 2017-10-23 00:52:28 -04:00
Mark H Weaver bb234ed825
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
 2017-10-23 00:51:34 -04:00
Ludovic Courtès fc938a2775
gnu: lxqt-common: Remove. 
This package is marked as deprecated upstream.
Fixes <https://bugs.gnu.org/28823>.

* gnu/packages/lxqt.scm (lxqt-common): Remove.
 2017-10-22 16:05:26 -07:00
Ludovic Courtès ed9b09e4f0
gnu: impressive: Fix Python 2/3 dependency mismatch. 
* gnu/packages/pdf.scm (impressive)[inputs]: Depend on PYTHON2-PYGAME.
 2017-10-22 15:32:19 -07:00
rsiddharth 3a784700cd
gnu: Add ghc-aws. 
* gnu/packages/haskell.scm (ghc-aws): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:19 -07:00
rsiddharth 95fb25bf59
gnu: Add ghc-conduit-combinators. 
* gnu/packages/haskell.scm (ghc-condui-combinators): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth 463c39c339
gnu: ghc-conduit: Fix lint error. 
* gnu/packages/haskell.scm (ghc-conduit)[description]: Fix lint error.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth 7bc18f412b
gnu: ghc-conduit: Update to 1.2.12.1. 
* gnu/packages/haskell.scm (ghc-conduit): Update to 1.2.12.1.
[native-inputs]: Add "ghc-split".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth ed4cc0c5e9
gnu: Add ghc-mono-traversable. 
* gnu/packages/haskell.scm (ghc-mono-traversable): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth f6094850d0
gnu: Add ghc-foldl. 
* gnu/packages/haskell.scm (ghc-foldl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth 1896a2526d
gnu: Add ghc-vector-builder. 
* gnu/packages/haskell.scm (ghc-vector-builder): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth 33109c822a
gnu: Add ghc-rebase. 
* gnu/packages/haskell.scm (ghc-rebase): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:18 -07:00
rsiddharth 24535a3d00
gnu: Add ghc-uuid. 
* gnu/packages/haskell.scm (ghc-uuid): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth b999b0092e
gnu: Add ghc-uuid-types. 
* gnu/packages/haskell.scm (ghc-uuid-types): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth 6eda263586
gnu: Add ghc-network-info. 
* gnu/packages/haskell.scm (ghc-network-info): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth 0119f17f5d
gnu: Add ghc-cryptohash-sha1. 
* gnu/packages/haskell.scm (ghc-cryptohash-sha1): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth caac21006d
gnu: Add ghc-cryptohash-md5. 
* gnu/packages/haskell.scm (ghc-cryptohash-md5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth 8155778f52
gnu: Add ghc-puremd5 
* gnu/packages/haskell.scm (ghc-puremd5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth f78ed5d56f
gnu: Add ghc-pretty-hex. 
* gnu/packages/haskell.scm (ghc-pretty-hex): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:17 -07:00
rsiddharth 83c79ea0f8
gnu: Add ghc-crypto-api-tests. 
* gnu/packages/haskell.scm (ghc-crypto-api-tests): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth e2f6116e78
gnu: Add ghc-crypto-api. 
* gnu/packages/haskell.scm (ghc-crypto-api): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth 933e78045d
gnu: Add ghc-entropy. 
* gnu/packages/haskell.scm (ghc-entropy): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth 16d4125e90
gnu: Add ghc-either. 
* gnu/packages/haskell.scm (ghc-either): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth 87129984ca
gnu: Add ghc-monadrandom. 
* gnu/packages/haskell.scm (ghc-monadrandom): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth 4562c8c894
gnu: Add ghc-contravariant-extras. 
* gnu/packages/haskell.scm (ghc-contravariant-extras): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth e329bacb85
gnu: Add ghc-tuple-th. 
* gnu/packages/haskell.scm (ghc-tuple-th): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth ac4cb8fd7a
gnu: Add ghc-base-prelude. 
* gnu/packages/haskell.scm (ghc-base-prelude): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:16 -07:00
rsiddharth 371ad40c84
gnu: Add ghc-chunked-data. 
* gnu/packages/haskell.scm (ghc-chunked-data): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth 0c7172848e
gnu: Add ghc-statistics. 
* gnu/packages/haskell.scm (ghc-statistics): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth 8184b0f98c
gnu: ghc-base-orphans: Update to 0.6. 
* gnu/packages/haskell.scm (ghc-base-orphans): Update to 0.6.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth 608bf276d7
gnu: Add ghc-monad-par. 
* gnu/packages/haskell.scm (ghc-monad-par): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth f978e2ac20
gnu: Add ghc-abstract-deque. 
* gnu/packages/haskell.scm (ghc-abstract-deque): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth 59551881b1
gnu: Add ghc-monad-par-extras. 
* gnu/packages/haskell.scm (ghc-monad-par-extras): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth 97b26920a8
gnu: Add ghc-abstract-par. 
* gnu/packages/haskell.scm (ghc-abstract-par): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:15 -07:00
rsiddharth e0195ea875
gnu: Add ghc-test-framework-th. 
* gnu/packages/haskell.scm (ghc-test-framework-th): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth 897d4f2820
gnu: Add ghc-language-haskell-extract. 
* gnu/packages/haskell.scm
(ghc-language-haskell-extract): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth 30aede1b6f
gnu: Add ghc-vector-algorithms. 
* gnu/packages/haskell.scm (ghc-vector-algorithms): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth 1a2a247bce
gnu: Add ghc-mwc-random. 
* gnu/packages/haskell.scm (ghc-mwc-random): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth a51ba89774
gnu: Add ghc-math-functions. 
* gnu/packages/haskell.scm (ghc-math-functions): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth bdd7e3950f
gnu: Add ghc-erf. 
* gnu/packages/haskell.scm (ghc-erf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth c1274a0b79
gnu: Add ghc-vector-th-unbox. 
* gnu/packages/haskell.scm (ghc-vector-th-unbox): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:14 -07:00
rsiddharth 78d8b8f36a
gnu: Add ghc-errors. 
* gnu/packages/haskell.scm (ghc-errors): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-22 15:32:13 -07:00
Marius Bakke ef7dd2e259
gnu: python-chardet: Fix PyPi download location. 
This is a followup to a54cb3ce1f.

* gnu/packages/python.scm (python-chardet)[source](uri): Use PYPI-URI.
 2017-10-22 23:32:17 +02:00
Marius Bakke 60e29339d8
gnu: glibc: Fix CVE-2017-15670, CVE-2017-15671. 
* gnu/packages/patches/glibc-CVE-2017-15670-15671.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc/fixed): New variable.
(glibc-2.24, glibc-2.23, glibc-2.22)[source](patches): Add
'glibc-CVE-2017-15670-15671.patch'.
 2017-10-22 23:13:09 +02:00
Ricardo Wurmus 65fc5bf07d
gnu: faust-2: Update to 2.1.0. 
* gnu/packages/audio.scm (faust-2): Update to 2.1.0.
[source]: Fetch sources via git.
[arguments]: Add phase "fix-permissions".
 2017-10-22 21:25:28 +02:00
Marius Bakke 25669275a1
gnu: irssi: Update to 1.0.5 [security fixes]. 
Fixes CVE-2017-15228, CVE-2017-15227, CVE-2017-15721, CVE-2017-15723 and
CVE-2017-15722.  See <https://irssi.org/security/irssi_sa_2017_10.txt>.

* gnu/packages/irc.scm (irssi): Update to 1.0.5.
 2017-10-22 17:24:33 +02:00
Cyril Roelandt a54cb3ce1f
gnu: python-chardet: Update to 3.0.4. 
* gnu/packages/python.scm (python-chardet, python2-chardet): Update to 3.0.4.
 2017-10-22 17:13:19 +02:00
Cyril Roelandt 69f7f04544
gnu: python2-hypothesis: fix propagated inputs. 
* gnu/packages/python.scm (python2-hypothesis)[propagated-inputs]: Add
  python2-enum34, which was incorrectly listed among the native inputs.
 2017-10-22 17:13:15 +02:00
Nicolas Goaziou 7f7fadb592
gnu: keepassxc: Update to 2.2.1. 
* gnu/packages/password-utils.scm (keepassxc): Update to 2.2.1.
 2017-10-22 16:55:36 +02:00
宋文武 b000294ef7
gnu: qt: Set 'EffectiveSourcePaths' to 'qtbase' for submodules. 
Fixes a regression introduced in 8075b62378.
This allows 'linguist.pro' of 'qttools' to find 'ConfigVersion.cmake.in',
which is needed for 'Qt5LinguistToolsConfigVersion.cmake'.

Reported by Thomas Danckaert <post@thomasdanckaert.be>.

* gnu/packages/qt.scm (qtsvg)[arguments]: Set 'EffectiveSourcePaths' in
the 'configure-qmake' phase.
 2017-10-22 19:37:35 +08:00
Marius Bakke 3e8daecfd8
gnu: vim: Update to 8.0.1207. 
* gnu/packages/vim.scm (vim): Update to 8.0.1207.
 2017-10-22 13:22:59 +02:00
Marius Bakke d436c6b566
gnu: rottlog: Remove hard-coded '/usr/sbin/sendmail' reference. 
* gnu/packages/admin.scm (rottlog)[arguments]: Add 'patch-paths' phase.
 2017-10-22 13:22:59 +02:00
Marius Bakke 58f0a19c58
gnu: sddm: Fix FTBFS after Qt paths change. 
* gnu/packages/display-managers.scm (sddm)[arguments]: Add 'fix-qml-include'
phase.
 2017-10-22 13:22:59 +02:00
Ricardo Wurmus 03639d0354
gnu: Add python-editdistance. 
* gnu/packages/textutils.scm (python-editdistance): New variable.
 2017-10-22 13:19:58 +02:00
Hartmut Goebel 12a9f7be54
gnu: kservice: Fix comment (number of failing tests). 
* gnu/packages/kde-frameweorks.scm(kservice): Fix comment.
 2017-10-22 12:58:42 +02:00
Ricardo Wurmus a00403c61c
gnu: suil: Update to 0.10.0. 
* gnu/packages/audio.scm (suil): Update to 0.10.0.
[inputs]: Add gtk+.
[description]: Remove version numbers from supported toolkits.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus 197484147a
gnu: ingen: Update to 0.0.0-2.cc4a4db33. 
* gnu/packages/music.scm (ingen): Update to 0.0.0-2.cc4a4db33.
[inputs]: Replace lv2 with lv2-devel.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus 5e30032ffb
gnu: Add lv2-devel. 
* gnu/packages/audio.scm (lv2-devel): New variable.
 2017-10-22 12:13:37 +02:00
Ricardo Wurmus ab8f4a7067
gnu: ganv-devel: Update to 1.5.4-12f7d6b04. 
* gnu/packages/gtk.scm (ganv-devel): Update to 1.5.4-12f7d6b04.
 2017-10-22 12:13:36 +02:00
Ricardo Wurmus a8bf6b9b9b
gnu: raul-devel: Update to 0.8.9-4db870b2b. 
* gnu/packages/audio.scm (raul-devel): Update to 0.8.9-4db870b2b.
 2017-10-22 12:13:36 +02:00
Ricardo Wurmus e206de67b6
gnu: Add r-rgraphviz. 
* gnu/packages/graph.scm (r-rgraphviz): New variable.
 2017-10-22 12:12:42 +02:00
Ricardo Wurmus 1ab867bebb
gnu: Add r-pdist. 
* gnu/packages/cran.scm (r-pdist): New variable.
 2017-10-22 12:10:33 +02:00
Julien Lepiller 6efc999678
gnu: Update coq-interval to 3.3.0. 
* gnu/packages/ocaml.scm (coq-interval): Update to 3.3.0.
[inputs]: Add coq-bignums.
 2017-10-22 10:21:25 +02:00
Julien Lepiller dbfb1a596a
gnu: Add coq-bignums. 
* gnu/packages/ocaml.scm (coq-bignums): New variable.
 2017-10-22 10:21:22 +02:00
Julien Lepiller 3ffd180cc5
gnu: Update coq-coquelicot to 3.0.1. 
* gnu/packages/ocaml.scm (coq-coquelicot): Update to 3.0.1.
 2017-10-22 10:21:19 +02:00
Julien Lepiller 2e331c9c43
gnu: Update coq-mathcomp to 1.6.2. 
* gnu/packages/ocaml.scm (coq-mathcomp): Update to 1..6.2.
 2017-10-22 10:21:16 +02:00
Julien Lepiller b44f13e04c
gnu: Update coq-flocq to 2.6.0. 
* gnu/packages/ocaml.scm (coq-flocq): Update to 2.6.0.
 2017-10-22 10:21:14 +02:00
Julien Lepiller 6e4da73710
gnu: Update coq to 8.7.0. 
* gnu/packages/ocaml.scm (coq): Update to 8.7.0.
[build-system]: Use ocaml-build-system.
[inputs]: Add python-2.
[arguments]: Disable two failing tests.
 2017-10-22 10:21:11 +02:00
Julien Lepiller 07b4cd3a48
gnu: camlp5: install META file. 
* gnu/packages/ocaml.scm (camlp5) [phases]: New install-meta phase.
 2017-10-22 10:20:50 +02:00
Marius Bakke 3d679ab1e5
gnu: lame: Update to 3.100. 
* gnu/packages/mp3.scm (lame): Update to 3.100.
[source]: Don't hard-code version.
 2017-10-22 00:39:26 +02:00
Marius Bakke 28d0b52164
gnu: python-pyqt: Update to 5.9. 
* gnu/packages/qt.scm (python-pyqt): Update to 5.9.
 2017-10-21 22:38:55 +02:00
Marius Bakke 079e679219
gnu: python-sip: Update to 4.19.3. 
* gnu/packages/qt.scm (python-sip): Update to 4.19.3.
 2017-10-21 22:38:55 +02:00
Tobias Geerinckx-Rice a4194d1684
gnu: rest: Update to 0.8.1. 
* gnu/packages/gnome.scm (rest): Update to 0.8.1.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice 4b9a65bf6e
gnu: gnome-disk-utility: Update to 3.26.1. 
* gnu/packages/gnome.scm (gnome-disk-utility): Update to 3.26.1.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice b27991179e
gnu: perl-geo-ip: Update to 1.51. 
* gnu/packages/networking.scm (perl-geo-ip): Update to 1.51.
 2017-10-21 17:43:46 +02:00
Tobias Geerinckx-Rice 5713bbf157
Use HTTPS for bioconductor.org. 
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
 2017-10-21 17:43:40 +02:00
Kei Kebreau 82bdcfe821
gnu: schismtracker: Update to 20170910. 
* gnu/packages/music.scm (schismtracker): Update to 20170910.
 2017-10-21 09:44:28 -04:00
Maxim Cournoyer fd75eb6cd4
gnu: Fix the hashes of mutated GitHub archives. 
Fixes <https://bugs.gnu.org/28745>.

* gnu/packages/audio.scm (csound): Fix hash.
* gnu/packages/engineering.scm (fritzing): Likewise.
* gnu/packages/erlang.scm (erlang): Likewise.
* gnu/packages/fonts.scm (font-google-material-design-icons): Likewise.
* gnu/packages/graphics.scm (ogre): Likewise.
* gnu/packages/java.scm (java-plexus-interpolation, antlr3): Likewise.
* gnu/packages/serialization.scm (yaml-cpp): Likewise.
* gnu/packages/version-control.scm (libgit2): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-20 22:55:51 +02:00
Leo Famulari 7827032a7c
gnu: libvirt: Fix CVE-2017-1000256. 
* gnu/packages/patches/libvirt-CVE-2017-1000256.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (libvirt)[source]: Use it.
 2017-10-20 15:36:43 -04:00
Leo Famulari 48f8b07082
gnu: mysql: Update to 5.7.20. 
* gnu/packages/databases.scm (mysql): Update to 5.7.20.
 2017-10-20 15:36:42 -04:00
Leo Famulari 3890df5800
gnu: webkitgtk: Update to 2.18.1. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.1.
 2017-10-20 15:36:39 -04:00
Tobias Geerinckx-Rice a6e70e1169
gnu: youtube-dl: Update to 2017.10.20. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.20.
 2017-10-20 19:48:34 +02:00
Tobias Geerinckx-Rice 5a740d06b6
gnu: dovecot: Update to 2.2.33.2. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.2.
 2017-10-20 19:48:34 +02:00
Tobias Geerinckx-Rice fa9ac83ec4
gnu: ola: Build with protobuf@2. 
This follows up commit dd12d4aad0.

* gnu/packages/protobuf.scm (protobuf-2): New variable.
* gnu/packages/lighting.scm (ola)[propagated-inputs]: Use it.
 2017-10-20 19:48:33 +02:00
Tobias Geerinckx-Rice 77aa706ab6
gnu: font-hack: Update to 3.000. 
* gnu/packages/fonts.scm (font-hack): Update to 3.000.
[source]: Download from new account.
[license]: Explicitly list all licences.
 2017-10-20 19:48:33 +02:00
Julien Lepiller c812f46058
gnu: Add aegisub. 
* gnu/packages/video.scm (aegisub): New variable.
 2017-10-20 19:41:57 +02:00
Julien Lepiller 6779ae27e6
gnu: Add ffms2. 
* gnu/packages/video.scm (aegisub): New variable.
 2017-10-20 19:41:34 +02:00
Efraim Flashner f71ce2824d
gnu: speexdsp: Fix building on aarch64-linux. 
* gnu/packages/xiph.scm (speexdsp)[arguments]: On aarch64-linux, disable
neon optimisations.
 2017-10-20 16:23:48 +03:00
Oleg Pykhalov 6df274073a
gnu: Add emacs-json-snatcher. 
* gnu/packages/emacs.scm (emacs-json-snatcher): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-20 14:41:41 +02:00
ng0 49d3d1d937
gnu: shellcheck: Update to 0.4.6. 
* gnu/packages/haskell.scm (shellcheck): Update to 0.4.6.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-20 14:41:41 +02:00
Tobias Geerinckx-Rice 3b2fa47879
gnu: dos2unix: Update to 7.4.0. 
* gnu/packages/textutils.scm (dos2unix): Update to 7.4.0.
 2017-10-20 02:16:56 +02:00
Tobias Geerinckx-Rice 6c0c175271
gnu: cowsay: Swap ‘build’ and ‘install’ phases. 
* gnu/packages/games.scm (cowsay)[arguments]: Invoke ‘install.sh’ during the
‘install’ phase.  Delete the ‘build’ phase, as there's nothing to be built.
 2017-10-20 02:16:55 +02:00
Tobias Geerinckx-Rice 46ba5337c0
gnu: cowsay: Update to 3.04. 
* gnu/packages/games.scm (cowsay): Update to 3.04.
[source]: Download from new location.
[home-page]: Point directly to the relevant page.
[description]: Correct mark-up and expand slightly.
 2017-10-20 02:16:54 +02:00
Tobias Geerinckx-Rice 8cccd09d3e
gnu: colordiff: Use HTTPS home page. 
* gnu/packages/patchutils.scm (colordiff)[home-page]: Use HTTPS.
 2017-10-20 02:16:54 +02:00
Tobias Geerinckx-Rice fc622383a7
gnu: unbound: Update to 1.6.7. 
* gnu/packages/dns.scm (unbound): Update to 1.6.7.
 2017-10-20 02:16:53 +02:00
Tobias Geerinckx-Rice 378140e591
gnu: neofetch: Update to 3.3.0. 
* gnu/packages/admin.scm (neofetch): Update to 3.3.0.
[arguments]: Add ‘install’ phase replacement that manually invokes make.
 2017-10-20 02:16:52 +02:00
Tobias Geerinckx-Rice 1e9433cf4d
gnu: qtox: Update to 1.12.1. 
* gnu/packages/messaging.scm (qtox): Update to 1.12.1.
 2017-10-20 02:16:52 +02:00
Tobias Geerinckx-Rice 57473bfc51
gnu: speedtest-cli: Update to 1.0.7. 
* gnu/packages/networking.scm (speedtest-cli): Update to 1.0.7.
 2017-10-20 02:16:51 +02:00
Tobias Geerinckx-Rice 47b85a69c0
gnu: cppcheck: Update to 1.81. 
* gnu/packages/check.scm (cppcheck): Update to 1.81.
 2017-10-20 02:16:51 +02:00
Kei Kebreau 7f65202990
gnu: python-sge-pygame: Update source URL. 
* gnu/packages/game-development.scm (python-sge-pygame)[source]: Update URL.
 2017-10-19 18:01:37 -04:00
Leo Famulari 9ccce79910
gnu: musl: Update to 1.1.17. 
* gnu/packages/musl.scm (musl): Update to 1.1.17.
[source]: Remove patch.
* gnu/packages/patches/musl-CVE-2016-8859.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-10-19 17:37:25 -04:00
Ludovic Courtès 9b396c0cab
vm: Always use GRUB/i386. 
Fixes <https://bugs.gnu.org/28768>.
Reported by Oleg Pykhalov <go.wigust@gmail.com>.

* gnu/system/vm.scm (virtualized-operating-system): Override the
'bootloader' field.
 2017-10-19 23:21:49 +02:00
Mark H Weaver b11962067b
gnu: linux-libre: Update to 4.13.8. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.8.
(%linux-libre-hash): Update hash.
 2017-10-19 15:31:47 -04:00
Mark H Weaver 7a402621ec
gnu: linux-libre@4.9: Update to 4.9.57. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.57.
 2017-10-19 15:31:02 -04:00
Mark H Weaver a7c3dfeb6c
gnu: linux-libre@4.4: Update to 4.4.93. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.93.
 2017-10-19 15:30:30 -04:00
Mark H Weaver a8401c4ef1
gnu: linux-libre@4.1: Update to 4.1.45. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.45.
Remove patch that is now included upstream.
 2017-10-19 15:29:09 -04:00
Marius Bakke 8c1db4fc58
gnu: yadifa: Update to 2.2.6. 
* gnu/packages/dns.scm (yadifa): Update to 2.2.6.
 2017-10-19 21:21:01 +02:00
Marius Bakke 43dc47fa24
gnu: Add zathura-pdf-mupdf. 
* gnu/packages/pdf.scm (zathura-pdf-mupdf): New variable.
 2017-10-19 21:21:01 +02:00
Marius Bakke 513885b54e
gnu: qemu: Build with libjpeg-turbo. 
This gets rid of a compile warning since SPICE uses libjpeg-turbo, and reduces
the closure size by 0.8MiB.

* gnu/packages/virtualization.scm (qemu)[inputs]: Replace LIBJPEG-8 with
LIBJPEG-TURBO.
 2017-10-19 21:20:56 +02:00
Oleg Pykhalov d1c11418e7
gnu: emacs: Fix Man default C header file search path. 
* gnu/packages/emacs.scm (emacs): Make sure Man looks for C header files in
  the right places.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:47 +02:00
宋文武 b79813a19a
gnu: speex: Build and install 'speexdec' and 'speexenc'. 
* gnu/packages/xiph.scm (speex)[native-inputs]: Add 'pkg-config'.
[inputs]: Add 'speexdsp'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:44 +02:00
Andy Patterson 4ad8fbd185
gnu: virt-manager: Fix default URI check. 
Allows virt-manager to connect to qemu://system by default.

* gnu/packages/virtualization.scm (virt-manager)[arguments]<#:phases>: Add
'fix-default-uri.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:44 +02:00
Andy Patterson b764a9f5e0
gnu: virt-manager: Enable statistics graphing support. 
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add
python2-pycairo.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:44 +02:00
Andy Patterson 9a187b39b7
gnu: qemu: Add OpenGL support. 
Enables virgl support with spice 0.13+.

* gnu/packages/virtualization.scm (qemu)[arguments]<#:configure-flags>: Add
--enable-opengl.
[inputs]: Add libdrm and libepoxy.
(qemu-minimal)[inputs]: Remove libdrm and libepoxy.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:44 +02:00
Andy Patterson 8da7f79281
gnu: virt-manager: Enable spice-gtk support. 
* gnu/packages/virtualization.scm (virt-manager)[inputs]: Add spice-gtk.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:43 +02:00
Andy Patterson c44dd0d676
gnu: spice-gtk: Enable GObject introspection support. 
Allows virt-manager to use the spice-gtk widget.

* gnu/packages/spice.scm (spice-gtk)[inputs]: Add gobject-introspection.
[arguments]<#:configure-flags>: Add --enable-introspection.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:43 +02:00
Andy Patterson b376ec57f9
gnu: qemu: Enable spice usb redirection support. 
* gnu/packages/virtualization.scm (qemu)[arguments]<#:configure-flags>: New
argument.
[inputs]: Add usbredir.
(qemu-minimal)[arguments]<#:configure-flags>: Restrict them even when they are
set by qemu.
[inputs]: Remove usbredir.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-19 12:17:43 +02:00
Ricardo Wurmus ad3c61fcd3
gnu: python-hy: Update to 0.13.0. 
* gnu/packages/python.scm (python-hy): Update to 0.13.0.
 2017-10-19 01:37:52 +02:00
ng0 909f02dd70
gnu: Order module imports in (gnu packages mate) alphabetically. 
* gnu/packages/mate.scm: Order module imports alphabetically.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-19 01:22:18 +02:00
Christopher Allan Webber 0ff4425cea
gnu: Add dirvish. 
* gnu/packages/backup.scm (dirvish): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-19 01:14:28 +02:00
Christopher Allan Webber a1777c77f0
gnu: Add perl-libtime-period. 
* gnu/packages/perl.scm (perl-libtime-period): New variable.
 2017-10-19 01:13:40 +02:00
Christopher Allan Webber 7f926760ed
gnu: Add perl-libtime-parsedate. 
* gnu/packages/perl.scm (perl-libtime-parsedate): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-19 01:06:53 +02:00
Tobias Geerinckx-Rice 9d8796a516
Revert "gnu: python-pyatspi: Update to 2.26.0." 
This reverts commit 629f33e233, which breaks
orca@3.26.0.
 2017-10-18 23:58:08 +02:00
Ricardo Wurmus c0770feedd
gnu: f-seq: Fix location of commons-cli.jar. 
* gnu/packages/bioinformatics.scm (f-seq)[arguments]: Fix location of
commons-cli.jar in the wrapper script.
 2017-10-18 23:54:16 +02:00
Tobias Geerinckx-Rice 39427f9042
gnu: eog-plugins: Update to 3.26.1. 
* gnu/packages/gnome.scm (eog-plugins): Update to 3.26.1.
 2017-10-18 23:25:05 +02:00
Tobias Geerinckx-Rice 0a1a93b4aa
gnu: eog: Update to 3.26.1. 
* gnu/packages/gnome.scm (eog): Update to 3.26.1.
 2017-10-18 23:25:05 +02:00
Tobias Geerinckx-Rice 629f33e233
gnu: python-pyatspi: Update to 2.26.0. 
* gnu/packages/gnome.scm (python-pyatspi): Update to 2.26.0.
 2017-10-18 23:25:04 +02:00
Tobias Geerinckx-Rice 2a86fece22
gnu: btrfs-progs: Update to 4.13.3. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.13.3.
 2017-10-18 23:25:04 +02:00
Tobias Geerinckx-Rice 3031b138f5
gnu: hplip: Update to 3.17.10. 
* gnu/packages/cups.scm (hplip): Update to 3.17.10.
 2017-10-18 23:25:04 +02:00
Ludovic Courtès baa6790b4c
gnu: mailutils: Update to 3.3. 
* gnu/packages/mail.scm (mailutils): Update to 3.3.
[arguments]: Rename 'pre-build' phase to 'prepare-test-suite', and move
after 'check'.  Set 'HOME', and create ~/.mh_profile.
 2017-10-18 23:22:19 +02:00
Ludovic Courtès 8cb537acbc
gnu: perl-crypt-random-source: Use 'perl-license'. 
* gnu/packages/crypto.scm (perl-crypt-random-source)[license]: Change to
LICENSE:PERL-LICENSE.
 2017-10-18 23:22:19 +02:00
Stefan Reichör ef5c40aa2d
gnu: Add atool. 
* gnu/packages/compression.scm (atool): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-18 23:08:39 +02:00
Marius Bakke 07dfc89859
gnu: mupdf: Fix CVE-2017-15587. 
* gnu/packages/patches/mupdf-CVE-2017-15587.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf)[source](patches): Use it.
 2017-10-18 22:15:09 +02:00
Ricardo Wurmus dc1d06ba9e
gnu: python-protobuf: Update to 3.4.0. 
* gnu/packages/protobuf.scm (python-protobuf): Update to 3.4.0.
 2017-10-18 01:49:14 +02:00
Ricardo Wurmus bfd073319c
gnu: Add protobuf-c. 
* gnu/packages/protobuf.scm (protobuf-c): New variable.
 2017-10-18 01:49:14 +02:00
Ricardo Wurmus dd12d4aad0
gnu: protobuf: Update to 3.4.1. 
* gnu/packages/protobuf.scm (protobuf): Update to 3.4.1.
 2017-10-18 01:49:14 +02:00
Marius Bakke b2850fd170
gnu: nginx: Update to 1.12.2. 
* gnu/packages/web.scm (nginx): Update to 1.12.2.
 2017-10-17 21:05:54 +02:00
Marius Bakke 790d33c3bb
gnu: rofi: Update to 1.4.2. 
* gnu/packages/xdisorg.scm (rofi): Update to 1.4.2.
 2017-10-17 21:05:54 +02:00
Ricardo Wurmus e059bdc9a7
gnu: r-tidyr: Update to 0.7.2. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.2.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus d8455fe146
gnu: r-tidyselect: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-tidyselect): Update to 0.2.2.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus c43db8da3a
gnu: r-rcpparmadillo: Update to 0.8.100.1.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.8.100.1.0.
[native-inputs]: Add r-knitr.
 2017-10-17 20:58:24 +02:00
Ricardo Wurmus 711e6cc5f4
gnu: r-data-table: Update to 1.10.4-2. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4-2.
 2017-10-17 20:58:23 +02:00
Ricardo Wurmus 767ad2f7ad
gnu: r-chron: Update to 2.3-51. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-51.
 2017-10-17 20:58:23 +02:00
Ricardo Wurmus dc6cb56dec
gnu: r-dplyr: Update to 0.7.4. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.4.
 2017-10-17 20:58:23 +02:00
Ricardo Wurmus 7340fc5014
gnu: r-curl: Update to 3.0. 
* gnu/packages/web.scm (r-curl): Update to 3.0.
 2017-10-17 20:58:19 +02:00
Ricardo Wurmus 94b55ace14
gnu: axoloti-runtime: Update home page. 
* gnu/packages/axoloti.scm (axoloti-runtime)[home-page]: Use redirection
target URL.
 2017-10-17 17:32:20 +02:00
Ricardo Wurmus d991b05664
gnu: Add Axoloti. 
* gnu/packages/axoloti.scm: New file.
* gnu/packages/patches/libusb-for-axoloti.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
(GNU_SYSTEM_MODULES): Add module.
 2017-10-17 16:49:20 +02:00
Ricardo Wurmus 8843373322
gnu: java-jgit: Include properties files. 
* gnu/packages/version-control.scm (java-jgit)[arguments]: Add phase
"add-properties".
(java-jgit-4.2)[arguments]: Move modification of phases into
substitute-keyword-arguments clause.
 2017-10-17 16:49:20 +02:00
Ludovic Courtès c56c5e78ea
gnu: guix: Fix content hash. 
Fixes a mistake in bb4b9f7bf3, which was
due to the present of a hard link in my source tree, which confused
'git-predicate'...

* gnu/packages/package-management.scm (guix)[source]: Fix content hash.
 2017-10-17 13:24:02 +02:00
Ludovic Courtès 65dabe4e18
gnu: perf: Find 'tips.txt'. 
* gnu/packages/linux.scm (perf)[arguments]: Use "prefix", not
"DESTDIR".  This allows 'perf report' to find 'tips.txt'.
 2017-10-17 13:24:02 +02:00
Ludovic Courtès 1d484507dc
gnu: perf: Add dependency on libunwind and libnuma. 
* gnu/packages/linux.scm (perf)[inputs]: Add NUMACTL and LIBUNWIND.
 2017-10-17 13:24:01 +02:00
Ludovic Courtès bb4b9f7bf3
gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix): Update to 357ab93.
 2017-10-17 11:24:54 +02:00
Roel Janssen 357ab93aac
gnu: Add python2-py2neo. 
* gnu/packages/python.scm (python2-py2neo): New variable.
 2017-10-17 09:59:35 +02:00
Roel Janssen 4640a11bee
gnu: Add python2-neo4j-driver. 
* gnu/packages/python.scm (python2-neo4j-driver): New variable.
 2017-10-17 09:59:06 +02:00
Leo Famulari 09748a3527
gnu: wpa-supplicant: Fix "KRACK" key reinstallation attacks [security fixes]. 
Fixes CVE-2017-{13078,13079,13080,13081,13082,13087,13088}.

See these announcements for more information:
https://w1.fi/security/2017-1/wpa-packet-number-reuse-with-replayed-messages.txt
https://www.krackattacks.com/

* gnu/packages/patches/wpa-supplicant-CVE-2017-13082.patch,
gnu/packages/patches/wpa-supplicant-fix-key-reuse.patch,
gnu/packages/patches/wpa-supplicant-fix-nonce-reuse.patch
gnu/packages/patches/wpa-supplicant-fix-zeroed-keys.patch,
gnu/packages/patches/wpa-supplicant-krack-followups.patch: New files.
* gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Use them.
* gnu/local.mk (dist_patch_DATA): Add them.
 2017-10-16 14:17:27 -04:00
Ludovic Courtès 484a72a036
gnu: emacs-org, emacs-org-contrib: Update to 20171016. 
* gnu/packages/emacs.scm (emacs-org, emacs-org-contrib): Update to
20171016.
 2017-10-16 15:49:19 +02:00
Ludovic Courtès d8ec1b719b
gnu: emacs-tiny: Update to 0.2.1. 
* gnu/packages/emacs.scm (emacs-tiny): Update to 0.2.1.
 2017-10-16 15:49:04 +02:00
Ludovic Courtès 13869ff593
gnu: emacs-adaptive-wrap: Update to 0.5.1. 
* gnu/packages/emacs.scm (emacs-adaptive-wrap): Update to 0.5.1.
 2017-10-16 15:48:42 +02:00
Ludovic Courtès 5f51f39e83
gnu: emacs-queue: Update to 0.2. 
* gnu/packages/emacs.scm (emacs-queue): Update to 0.2.
 2017-10-16 15:48:14 +02:00
Ludovic Courtès ceba99ef95
gnu: emacs-ahungry-theme: Update to 1.6.0. 
* gnu/packages/emacs.scm (emacs-ahungry-theme): Update to 1.6.0.
 2017-10-16 15:47:55 +02:00
Ludovic Courtès f41bb8d107
gnu: libextractor: Update to 1.6. 
* gnu/packages/gnunet.scm (libextractor): Update to 1.6.
 2017-10-16 15:47:39 +02:00
Adam Van Ymeren a97bfa46cd
gnu: totem: Disable parallel build due to http://debbugs.gnu.org/28813 
Fixes <http://bugs.gnu.org/28813>.

* gnu/packages/gnome.scm (totem)[arguments]: Add #:parallel-build?.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-16 14:57:54 +02:00
Christopher Baines 8e2ae7ee29
gnu: Add emacs-org-contrib. 
* gnu/packages/emacs.scm (emacs-org-contrib): New variable.
 2017-10-16 08:39:50 +01:00
Leo Famulari 8de5ca0288
gnu: tmux: Update to 2.6. 
* gnu/packages/tmux.scm (tmux): Update to 2.6.
 2017-10-15 21:37:51 -04:00
Tobias Geerinckx-Rice 7732cca18d
gnu: youtube-dl: Update to 2017.10.15.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.15.1.
 2017-10-15 22:51:09 +02:00
Tobias Geerinckx-Rice 0367c89dd4
gnu: baobab: Update to 3.26.1. 
* gnu/packages/gnome.scm (baobab): Update to 3.26.1.
 2017-10-15 22:51:09 +02:00
ng0 96acbc2be8
gnu: Add cinnamon-desktop. 
* gnu/packages/cinnamon.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-10-15 20:29:31 +01:00
Ricardo Wurmus 791cfa672d
gnu: propeller-development-suite: Use stable release. 
* gnu/packages/embedded.scm (propeller-binutils): Take sources from
release_1_0 branch.
[arguments]: Remove "patch-/bin/sh-in-tests" phase; add "chdir" phase; disable
Werror flag.
(propeller-gcc-4): Use sources from release_1_0 branch.
[arguments]: Add "chdir" phase.
[home-page]: Change to official home page.
(proplib): Use sources from release_1_0 branch.
[arguments]: Add "chdir" phase; remove outdated patch from "fix-Makefile"
phase; do not build and install tiny library.
[home-page]: Change to official home page.
(propeller-load): Use sources from release_1_0 branch.
[arguments]: Add "chdir" phase.
[home-page]: Change to official home page.
 2017-10-15 17:36:11 +02:00
Kei Kebreau b3b2efc82d
gnu: maxima: Update to 5.41.0. 
* gnu/packages/maths.scm (maxima): Update to 5.41.0.
 2017-10-15 10:50:45 -04:00
Efraim Flashner 838b232e97
gnu: ruby-ffi: Move to libffi.scm. 
* gnu/packages/ruby.scm (ruby-ffi): Move from here ...
* gnu/packages/libffi.scm: ... to here.
 2017-10-15 11:57:15 +03:00
Efraim Flashner 0751fddd91
gnu: python-cffi: Move to libffi.scm 
* gnu/packages/python.scm (python-cffi): Move from here ...
* gnu/packages/libffi.scm: ... to here.
* gnu/packages/crypto.scm, gnu/packages/password-utils.scm: Adjust
module imports.
 2017-10-15 11:57:15 +03:00
Efraim Flashner cca55d571c
gnu: python-cffi: Update to 1.11.2. 
* gnu/packages/python.scm (python-cffi): Update to 1.11.2.
[home-page]: Use 'https'.
 2017-10-15 11:57:15 +03:00
Efraim Flashner a1add5b7fb
gnu: python-cffi: Disable test that fails on aarch64. 
* gnu/packages/python.cm (python-cffi)[arguments]: Disable test that
is known to fail on aarch64.
 2017-10-15 11:57:15 +03:00
Ricardo Wurmus dd46c16b12
gnu: fluidsynth: Update to 1.1.8. 
* gnu/packages/audio.scm (fluidsynth): Update to 1.1.8.
[build-system]: Use cmake-build-system.
[arguments]: Disable tests; add phase "fix-libdir"; remove build phase
"remove-broken-symlinks".
[license]: Change to lpgl2.1+.
 2017-10-15 10:45:20 +02:00
Mark H Weaver 58381958cc
gnu: linux-libre: Update to 4.13.7. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.7.
(%linux-libre-hash): Update hash.
 2017-10-14 22:37:37 -04:00
Tobias Geerinckx-Rice 9ced103324
gnu: cups-minimal: Mark up description. 
* gnu/packages/cups.scm (cups-minimal)[description]: Use @dfn.
 2017-10-14 17:32:46 +02:00
Tobias Geerinckx-Rice 96b44a9456
gnu: cups-filters: Download over HTTPS. 
* gnu/packages/cups.scm (cups-filters)[source]: Use HTTPS.
 2017-10-14 17:32:46 +02:00
ng0 b35936880d
gnu: Add python-pyqrcode. 
* gnu/packages/python.scm (python-pyqrcode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:37 +02:00
ng0 f0f6f9f6cf
gnu: Add python-pynacl. 
* gnu/packages/crypto.scm (python-pynacl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:37 +02:00
ng0 3aa440caef
gnu: Add python-py-ubjson. 
* gnu/packages/web.scm (python-py-ubjson): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
ng0 7ae282fbea
gnu: Add python-cbor. 
* gnu/packages/serialization.scm (python-cbor): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
ng0 d43210f332
gnu: neomutt: Update to 20171013. 
* gnu/packages/mail.scm (neomutt): Update to 20171013.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
Kyle Meyer a209907ed6
gnu: emacs-ess: Update to 16.10. 
* gnu/packages/emacs.scm (emacs-ess): Update to 16.10.
[arguments]: Enable tests.
[source]: Add snippet to prevent build process from trying to download
external julia-mode.el.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
Kyle Meyer db29e59865
gnu: Add emacs-julia-mode. 
* gnu/packages/emacs.scm (emacs-julia-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
Kyle Meyer d02c287390
gnu: Add emacs-easy-kill. 
* gnu/packages/emacs.scm (emacs-easy-kill): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
Rutger Helling 7aafb3b324
gnu: games: Add openrct2. 
* gnu/packages/games.scm (openrct2): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-14 17:07:36 +02:00
Ludovic Courtès 8380a18176
gnu: guile-sdl, guile-sly: Switch to Guile 2.2. 
* gnu/packages/sdl.scm (guile-sdl)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
[arguments]: Add 'skip-cursor-test' phase.
* gnu/packages/guile.scm (guile-sly)[propagated-inputs]: Switch to
GUILE-2.2.
 2017-10-14 17:07:36 +02:00
Ludovic Courtès 44394ef917
gnu: guile-sly: Remove 2.0-specific bits. 
* gnu/packages/guile.scm (guile-sly)[source](modules, snippet): New
fields.
 2017-10-14 17:07:35 +02:00
Ludovic Courtès 4fa3f7967f
gnu: guile-sdl: Remove 2.0-specific bits. 
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Add #:modules.
In 'fix-env-and-patch' phase, use 'open-pipe*' to determine the
effective version; use it in makefiles.
 2017-10-14 17:07:35 +02:00
Marius Bakke 31c70cce50
gnu: mesa: Disable svga driver for armhf. 
* gnu/packages/gl.scm (mesa)<#:configure-flags>: Drop svga gallium driver.
 2017-10-14 10:22:41 +02:00
ng0 a4593cc95b
gnu: python-fonttools: Update to 3.15.1. 
* gnu/packages/python.scm (python-fonttools): Update to 3.15.1.
  (source)[uri]: Use 'pypi-uri'.
  (native-inputs): Add unzip.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-10-14 07:18:19 +01:00
Cyril Roelandt af6ce61088
gnu: python-biopython: Update to 1.70. 
* gnu/packages/python.scm (python-biopython, python2-biopython): Update to 1.70.
 2017-10-14 03:17:50 +02:00
Ricardo Wurmus a47ed09624
gnu: meson: Update to 0.43.0. 
* gnu/packages/build-tools.scm (meson): Update to 0.43.0.
 2017-10-13 22:47:33 +02:00
Tobias Geerinckx-Rice d24c69d866
gnu: file-roller: Update to 3.26.1. 
* gnu/packages/gnome.scm (file-roller): Update to 3.26.1.
 2017-10-13 21:52:28 +02:00
Tobias Geerinckx-Rice a3070d1b4f
gnu: gnome-backgrounds: Update to 3.26.2. 
* gnu/packages/gnome.scm (gnome-backgrounds): Update to 3.26.2.
 2017-10-13 21:52:28 +02:00
Tobias Geerinckx-Rice ff21b07e0b
gnu: dconf-editor: Update to 3.26.1. 
* gnu/packages/gnome.scm (dconf-editor): Update to 3.26.1.
 2017-10-13 21:52:27 +02:00
Tobias Geerinckx-Rice 3495e9412e
gnu: adwaita-icon-theme: Update to 3.26.0. 
* gnu/packages/gnome.scm (adwaita-icon-theme): Update to 3.26.0.
 2017-10-13 21:52:27 +02:00
Tobias Geerinckx-Rice 6baabe9246
gnu: gnome-terminal: Update to 3.26.1. 
* gnu/packages/gnome.scm (gnome-terminal): Update to 3.26.1.
 2017-10-13 21:52:27 +02:00
Tobias Geerinckx-Rice 7b487df995
gnu: vte: Update to 0.50.1. 
* gnu/packages/gnome.scm (vte): Update to 0.50.1.
 2017-10-13 21:52:26 +02:00
Tobias Geerinckx-Rice ad9e03e918
gnu: youtube-dl: Update to 2017.10.12. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.12.
 2017-10-13 21:52:26 +02:00
Tobias Geerinckx-Rice 71d60b966d
gnu: mcelog: Use HTTPS home page. 
* gnu/packages/linux.scm (mcelog)[home-page]: Use HTTPS.
 2017-10-13 21:52:26 +02:00
Tobias Geerinckx-Rice e03e9c86da
gnu: mcelog: Update to 154. 
* gnu/packages/linux.scm (mcelog): Update to 154.
 2017-10-13 21:52:26 +02:00
Christopher Baines 1f37465a66
gnu: Add emacs-graphviz-dot-mode. 
* gnu/packages/emacs.scm (graphviz-dot-mode): New variable.
 2017-10-13 20:41:46 +01:00
Alex Kost 0821e0672c
gnu: git-modes: Update to 1.2.6. 
* gnu/packages/emacs.scm (git-modes): Update to 1.2.6.
 2017-10-13 19:53:04 +03:00
Alex Kost dca0718c29
gnu: emacs-with-editor: Update to 2.7.0. 
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.7.0.
 2017-10-13 19:53:04 +03:00
Alex Kost d5e33910a9
gnu: magit: Update to 2.11.0. 
* gnu/packages/emacs.scm (magit, emacs-magit-popup): Update to 2.11.0.
 2017-10-13 19:53:04 +03:00
Ricardo Wurmus d95f1041de
gnu: eolie: Update to 0.9.4. 
* gnu/packages/gnome.scm (eolie): Update to 0.9.4.
[arguments]: Update build phases to use the meson build system.
[native-inputs]: Add meson-for-build, ninja, python, and gtk+:bin.
 2017-10-13 17:03:51 +02:00
Hartmut Goebel 109461f919
gnu: kdelibs4support: Remove redundant inputs. 
These are listed as propagated inputs already, no need
to list them as normal inputs again.

* gnu/packages/kde-frameworks.scm (kdelibs4support)[inputs]: Remove
  kconfigwidgets, kdesignerplugin, kdoctools, kguiaddons.
 2017-10-13 13:53:51 +02:00
Hartmut Goebel f96302abe7
gnu: kdoctools: Symlink some files referred to by different names. 
* gnu/package/kde-frameworks.scm (kdoctools)[arguments]
  <#:phases>'add-symlinks': New phase.
 2017-10-13 13:53:51 +02:00
Hartmut Goebel b87633fc0f
gnu: ktexteditor: Symlink some files referred to by different names. 
* gnu/package/kde-frameworks.scm (ktexteditor)[arguments]
  <#:phases>'add-symlinks': New phase.
 2017-10-13 13:53:51 +02:00
Hartmut Goebel d3726f0587
gnu: kdeclarative: Reduce the number of warnings when configuring. 
* gnu/packages/kde-frameworks.scm (kdeclarative)[inputs]: Add libepoxy.
  [native-inputs]: Add pkg-config.
 2017-10-13 13:53:50 +02:00
Hartmut Goebel 7a8287da25
gnu: kglobalaccel: Reduce the number of warnings when configuring. 
* gnu/packages/kde-frameworks.scm (kglobalaccel)[native-inputs]: Add
  pkg-config.
 2017-10-13 13:53:50 +02:00
Hartmut Goebel 91499e4524
gnu: sonnet: Reduce the number of warnings when configuring. 
* gnu/packages/kde-frameworks.scm (sonnet)[native-inputs]: Add pkg-config.
 2017-10-13 13:53:49 +02:00
Hartmut Goebel 455a0bf50c
gnu: kidletime: Enable fallback mode to X-Screensaver based poller. 
This does no harm and reduced the number of warnings. Also
pkg-config was added to reduce the number of warnings further.

* gnu/packages/kde-frameworks.scm (kidletime)[inputs]: Add
  libxscrnsaver. [native-inputs]: Add pkg-config.
 2017-10-13 13:53:49 +02:00
Hartmut Goebel cf7cf45a5f
gnu: kio: Symlink some files referred to by different names. 
* gnu/package/kde-frameworks.scm (kio)[arguments]
  <#:phases>'add-symlinks': New phase.
 2017-10-13 13:53:48 +02:00
Hartmut Goebel bb4fcf7ba6
gnu: kio: Adopt a patch from Nix. 
* gnu/package/kde-frameworks.scm (kio)[arguments]
  <#:phases>'patch': New phase.
 2017-10-13 13:53:48 +02:00
Hartmut Goebel 3d7bb7b304
gnu: kio: Remove unused input. 
This "acl" is not the "libacl" kio wants, but that libacl is not yet
available. Added a commend instead.

* gnu/packages/kde-frameworks.scm (kio)[inputs]: Remove acl.
 2017-10-13 13:53:47 +02:00
Hartmut Goebel 1ee4fb14f2
gnu: kparts: Make tests pass again. 
* gnu/packages/kde-frameworks.scm (kparts)[native-inputs]: Add
  shared-mime-info.
 2017-10-13 13:53:47 +02:00
Hartmut Goebel a9314dc307
gnu: bluez-qt: Add comment about status of tests. 
* gnu/packages/kde-frameworks.scm (bluez-qt)[arguments]: Add comment.
 2017-10-13 13:53:46 +02:00
Hartmut Goebel b67f7f667f
gnu: bluez-qt: Install udev-rules. 
This requires setting UDEV_RULES_INSTALL_DIR since the CMakeLists.txt does not
base this any prefix.

* gnu/packages/kde-frameworks.scm (bluez-qt)[arguments]<#:configure-flags>:
  Remove INSTALL_UDEV_RULE=OFF, add UDEV_RULES_INSTALL_DIR.
 2017-10-13 13:53:46 +02:00
Hartmut Goebel fa10ae4fbb
gnu: kfilemetadata: Enable support for PDF files and audio files. 
- Qt5 Multimedia module is needed to bild an extractor for audio files.
- poppler, which was defined as input, is not including the requested Qt
  support, thus poppler-qt is needed.

* gnu/packages/kde-frameworks.scm (kfilemetadata)[inuts]: Add qtmultimedia,
  replace poppler by poppler-qt5. [native-inputs]: Add pkg-config.
 2017-10-13 13:53:45 +02:00
Hartmut Goebel 66e7e43450
gnu: kdnssd: Enable service discovery on local network via avahi. 
* gnu/packages/kde-frameworks.scm (kdnssd)[inputs]: Add avahi.
 2017-10-13 13:53:45 +02:00
Hartmut Goebel ba81085b25
gnu: phonon: Enable building the Qt Designer plugin. 
Add native-inputs pkg-config, qttools and update comments.

This enables building the Qt Designer plugin.

* gnu/packages/kde-frameworks.scm (phonon): [native-inputs]: Add pkg-config,
  qttools.  [arguments]<#configure-flags>: Remove
  PHONON_INSTALL_QT_EXTENSIONS_INTO_SYSTEM_QT, to avoid installing the
  Phonon-Qt-extension into /gnu/store/…-qtbase-…/.
 2017-10-13 13:53:44 +02:00
Hartmut Goebel 11f6570011
gnu: kdesignerplugin: Add optional inputs. 
Still missing: kwebkit (KF5WebKitConfig.cmake).

* gnu/packages/kde-frameworks.scm (kdesignerplugin)[inputs]: Add kcompletion,
  kconfigwidgets, kiconthemes, kitemviews, kkio, kplotting, ktextwidgets,
  kwidgetsaddons, kxmlgui, sonnet.
 2017-10-13 13:53:44 +02:00
Hartmut Goebel d49766b293
gnu: Add kdewebkit. 
* gnu/package/kde-frameworks.scm (kdewebkit): New variable.
 2017-10-13 13:53:43 +02:00
Hartmut Goebel 79677b2f4f
gnu: kwallet: Add optional input qgpgme. 
Gpgme was already there, QGpgme was missing.

* gnu/packages/kde-frameworks.scm (kwallet)[inputs]: Add qgpgme.
 2017-10-13 13:53:42 +02:00
Hartmut Goebel cc527338ee
gnu: kconfigwidgets: Add optional native-input kdoctools. 
* gnu/packages/kde-frameworks.scm (kconfigwidgets)[native-inputs]:
  Add kdoctools.
 2017-10-13 13:53:42 +02:00
Hartmut Goebel 3263e94c55
gnu: kcoreaddons: Add native-input shared-mime-info and a comment. 
* gnu/packages/kde-frameworks.scm (kcoreaddons)[native-inputs]:
  Add shared-mime-info.
 2017-10-13 13:53:41 +02:00
Hartmut Goebel 274365ca1c
gnu: Update prison to 5.37.0. 
Align with the version of other kde-frameworks packages.

* gnu/package/kde-frameworks.scm (prision): Update to 5.37.0
 2017-10-13 13:53:41 +02:00
Hartmut Goebel f8127d2644
gnu: qtkeychain: Reduce the number of warnings when configuring. 
* gnu/packages/qt.scm (qtkeychain)[native-inputs]: Add pkg-config.
 2017-10-13 13:53:41 +02:00
Hartmut Goebel 868b1a025a
gnu: grantlee: Enable all tests. 
* gnu/packages/qt.scm (grantlee)[arguments]
  <#:phases>'check-setup': New phase, set QT_QPA_PLATFORM=offscreen.
  <#:phases>'check': Remove phase.
 2017-10-13 13:53:40 +02:00
Hartmut Goebel 61cc757d5f
gnu: kde-framworks: Fix installation directories. 
After the qtbase installation directories have been changed, kf5's plugins
etc. need to be install into lib/qt5/…, too. We change the global definitions
in "KDEInstallDirs.cmake", so this changes will apply to all packages without
these to need to define the paths. THis is okay, since "KDEInstallDirs.cmake"
defines the directory-layout guix is using.

* gnu/packages/kde-frameworks.scm (extra-cmake-modules)[#:phase fix-lib-path]:
  In modules/KDEInstallDirs.cmake also patch QTPLUGINDIR, QTQUICKIMPORTSDIR,
  QMLDIR.
  (kwindowsystem)[#:phase check]: Adjust QT_PLUGIN_PATH.
  (kfilemetadata)[#:phase check-setup]: dito.
 2017-10-13 13:53:40 +02:00
Hartmut Goebel 5430732b22
gnu: qscintilla: Adjust installation directory layout. 
* gnu/packages/qt.scm (qscintilla)[#:phase configure]: Set QT_INSTALL_DATA and
  QT_HOST_DATA to $OUT/lib/qt5.
 2017-10-13 13:53:39 +02:00
Hartmut Goebel 4eb972b95c
gnu: qtwebkit: Fix rpath for the qmlwebkit plugins. 
After the qtbase installation directories have been changed,
the relative RPATH in the libs no longer matched the sructure.

* gnu/packages/qt.scm(qtwebkit)[arguments]: New phase
  fix-qmlwebkit-plugins-rpath.
 2017-10-13 13:53:39 +02:00
宋文武 163651cbdc
gnu: qwt: Adjust installation directory layout. 
* gnu/packages/qt.scm (qwt)[arguments]<#:phases>: Modify 'qwtconfig.pri' to
use a directory layout that matching qtbase.  Modify 'doc/doc.pro' to remove
the misplaced installation of man pages.  Rename phase 'install-documentation'
to 'install-man-pages'.
 2017-10-13 13:53:39 +02:00
宋文武 8075b62378
gnu: qt: Fix install paths in submodules. 
Before this, the paths in pkg-config (.pc) and libtool (.la) files of
submodules are all pointing to qtbase.

* gnu/packages/qt.scm (qtbase)[native-inputs]: Move 'which' to
'propagated-inputs'.
[arguments]: Rename 'patch-qt_config.prf' phase to 'patch-mkspecs' and
patch more qmake spec files there.
(qtsvg)[arguments]: Add 'configure-qmake' phase.
 2017-10-13 13:53:38 +02:00
宋文武 6fc0e157ee
gnu: qtbase: Use a more standard directory layout. 
* gnu/packages/qt.scm (qtbase)[arguments]: Pass docdir, headerdir,
archdatadir, datadir and examplesdir to 'configure'.  Ajdust the
patch-qt_config.prf phase accordingly.
[native-search-paths]: Adjust accordingly.
(qtwayland)[arguments]: New field.

Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com>
 2017-10-13 13:53:37 +02:00
Ricardo Wurmus dad66da493
gnu: Add plink-ng. 
* gnu/packages/bioinformatics.scm (plink-ng): New variable.
 2017-10-13 11:14:00 +02:00
Ricardo Wurmus dc8ddbfb07
gnu: Add paml. 
* gnu/packages/bioinformatics.scm (paml): New variable.
 2017-10-13 11:14:00 +02:00
Chris Marusich f3eeca5621
gnu: Add GnuCash documentation. 
* gnu/packages/gnucash.scm (gnucash-docs): Add it.
  (gnucash): Use the glib-or-gtk-build-system, create a "doc" output, and
  install the output of "gnucash-docs" into there.
 2017-10-13 01:05:54 -07:00
Mark H Weaver 2eac8e6b0d
gnu: linux-libre: Update to 4.13.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.6.
(%linux-libre-hash): Update hash.
 2017-10-13 03:41:30 -04:00
Mark H Weaver e7804c3da1
gnu: linux-libre@4.9: Update to 4.9.56. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.56.
 2017-10-13 03:41:28 -04:00
Mark H Weaver ef036c7d52
gnu: linux-libre@4.4: Update to 4.4.92. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.92.
 2017-10-13 03:41:26 -04:00
Mark H Weaver 2890b07cd3
gnu: linux-libre@4.1: Update URL for CVE-2017-1000251 fix. 
* gnu/packages/linux.scm (linux-libre-4.1)[source]: Update the URL
and hash of the patch for CVE-2017-1000251.
 2017-10-13 03:37:30 -04:00
Ricardo Wurmus b38e417903
gnu: emacs-helm: Update to 2.8.5. 
* gnu/packages/emacs.scm (emacs-helm): Update to 2.8.5.
 2017-10-13 08:39:02 +02:00
Leo Famulari 947453a88d
gnu: Add Syncthing. 
* gnu/packages/syncthing.scm (syncthing): New variable.
 2017-10-12 21:22:55 -04:00
Leo Famulari ae8c7774c0
gnu: Add go-golang-org-x-text-union. 
* gnu/packages/syncthing.scm (go-golang-org-x-text-union): New variable.
 2017-10-12 21:22:55 -04:00
Leo Famulari 4c3cc9496c
gnu: Add go-golang-org-x-net-union. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-union): New variable.
 2017-10-12 21:22:55 -04:00
Leo Famulari 3c466da1d5
gnu: Add go-github-com-vitrun-qart-union. 
* gnu/packages/syncthing.scm (go-github-com-vitrun-qart-union): New variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari 503802ab91
gnu: Add go-github-com-gogo-protobuf-union. 
* gnu/packages/syncthing.scm (go-github-com-gogo-protobuf-union): New variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari cca22eb31a
gnu: Add go-golang-org-x-crypto-union. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-union): New variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari 3d86b557c6
gnu: Add go-github-com-audriusbutkevicius-kcp-go. 
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-kcp-go): New
variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari 478ebb31a9
gnu: Add go-github-com-templexxx-reedsolomon. 
* gnu/packages/syncthing.scm (go-github-com-templexxx-reedsolomon): New
variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari a3d98dd8d9
gnu: Add go-github-com-templexxx-cpufeat. 
* gnu/packages/syncthing.scm (go-github-com-templexxx-cpufeat): New variable.
 2017-10-12 21:22:54 -04:00
Leo Famulari 89d91ee2a0
gnu: Add go-github-com-kballard-go-shellquote. 
* gnu/packages/syncthing.scm (go-github-com-kballard-go-shellquote): New
variable.
 2017-10-12 21:22:53 -04:00
Leo Famulari 71415e23f9
gnu: Add go-github-com-audriusbutkevicius-cli. 
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-cli): New
variable.
 2017-10-12 21:22:53 -04:00
Leo Famulari cb42a2a89d
gnu: Add go-golang-org-x-time-rate. 
* gnu/packages/syncthing.scm (go-golang-org-x-time-rate): New variable.
 2017-10-12 21:22:53 -04:00
Leo Famulari 3ce463908a
gnu: Add go-github-com-xtaci-smux. 
* gnu/packages/syncthing.scm (go-github-com-xtaci-smux): New variable.
 2017-10-12 21:22:53 -04:00
Leo Famulari 936e02b480
gnu: Add go-github-com-pkg-errors. 
* gnu/packages/syncthing.scm (go-github-com-pkg-errors): New variable.
 2017-10-12 21:22:53 -04:00
Leo Famulari 66500b27e5
gnu: Add go-github-com-templexxx-xor. 
* gnu/packages/syncthing.scm (go-github-com-templexxx-xor): New variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari 2785690a23
gnu: Add go-github-com-chmduquesne-rollinghash-adler32. 
* gnu/packages/syncthing.scm (go-github-com-chmduquesne-rollinghash-adler32):
New variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari db64cb4010
gnu: Add go-github-com-ccding-go-stun. 
* gnu/packages/syncthing.scm (go-github-com-ccding-go-stun): New variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari 6deb73c493
gnu: Add go-github-com-audriusbutkevicius-pfilter. 
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-pfilter): New
variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari ea969c6b04
gnu: Add go-golang-org-x-text-unicode-norm. 
* gnu/packages/syncthing.scm (go-golang-org-x-text-unicode-norm): New variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari e4ef477212
gnu: Add go-golang-org-x-text-transform. 
* gnu/packages/syncthing.scm (go-golang-org-x-text-transform): New variable.
 2017-10-12 21:22:52 -04:00
Leo Famulari 04e2d470ab
gnu: Add go-golang-org-x-net-proxy. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-proxy): New variable.
 2017-10-12 21:22:51 -04:00
Leo Famulari 8c73bb2c72
gnu: Add go-golang-org-x-net-ipv6. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-ipv6): New variable.
 2017-10-12 21:22:51 -04:00
Leo Famulari f20d1300b3
gnu: Add go-golang-org-x-net-internal-iana. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-internal-iana): New variable.
 2017-10-12 21:22:51 -04:00
Leo Famulari 303dfd5c56
gnu: Add go-golang-org-x-net-context. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-context): New variable.
 2017-10-12 21:22:51 -04:00
Leo Famulari 3544d5259c
gnu: Add go-golang-org-x-net-bpf. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-bpf): New variable.
 2017-10-12 21:22:51 -04:00
Leo Famulari b5ad117bb2
gnu: Add go-golang-org-x-net-ipv4. 
* gnu/packages/syncthing.scm (go-golang-org-x-net-ipv4): New variable.
 2017-10-12 21:22:50 -04:00
Leo Famulari edcc061cec
gnu: Add go-golang-org-x-crypto-xtea. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-xtea): New variable.
 2017-10-12 21:22:50 -04:00
Leo Famulari 932fb47755
gnu: Add go-golang-org-x-crypto-twofish. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-twofish): New variable.
 2017-10-12 21:22:50 -04:00
Leo Famulari 95b493f2a8
gnu: Add go-golang-org-x-crypto-cast5. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-cast5): New variable.
 2017-10-12 21:22:50 -04:00
Leo Famulari 7e7df095d7
gnu: Add go-golang-org-x-crypto-salsa20. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-salsa20): New variable.
 2017-10-12 21:22:50 -04:00
Leo Famulari 63950f9b39
gnu: Add go-golang-org-x-crypto-tea. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-tea): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari b65620b6d2
gnu: Add go-golang-org-x-crypto-pbkdf2. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-pbkdf2): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari 3cf3cdc9b9
gnu: Add go-golang-org-x-crypto-blowfish. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-blowfish): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari 8da09afc1f
gnu: Add go-golang-org-x-crypto-bcrypt. 
* gnu/packages/syncthing.scm (go-golang-org-x-crypto-bcrypt): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari 892ced6d0f
gnu: Add go-github-com-vitrun-qart-qr. 
* gnu/packages/syncthing.scm (go-github-com-vitrun-qart-qr): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari 6934827a3e
gnu: Add go-github-com-vitrun-qart-gf256. 
* gnu/packages/syncthing.scm (go-github-com-vitrun-qart-gf256): New variable.
 2017-10-12 21:22:49 -04:00
Leo Famulari 292a6b0d16
gnu: Add go-github-com-vitrun-qart-coding. 
* gnu/packages/syncthing.scm (go-github-com-vitrun-qart-coding): New variable.
 2017-10-12 21:22:48 -04:00
Leo Famulari f7612f0fcf
gnu: Add go-github-com-thejerf-suture. 
* gnu/packages/syncthing.scm (go-github-com-thejerf-suture): New
variable.
 2017-10-12 21:22:48 -04:00
Leo Famulari c864a4a700
gnu: Add go-github-com-syndtr-goleveldb. 
* gnu/packages/syncthing.scm (go-github-com-syndtr-goleveldb): New
variable
 2017-10-12 21:22:48 -04:00
Leo Famulari 8d7e99243a
gnu: Add go-github-com-sasha-s-go-deadlock. 
* gnu/packages/syncthing.scm (go-github-com-sasha-s-go-deadlock): New variable.
 2017-10-12 21:22:48 -04:00
Leo Famulari 73a2f8418d
gnu: Add go-github-com-petermattis-goid. 
* gnu/packages/syncthing.scm (go-github-com-petermattis-goid): New variable.
 2017-10-12 21:22:48 -04:00
Leo Famulari 1a4795f9d0
gnu: Add go-github-com-rcrowley-go-metrics. 
* gnu/packages/syncthing.scm (go-github-com-rcrowley-go-metrics): New variable.
 2017-10-12 21:22:48 -04:00
Leo Famulari 6bc1eb1159
gnu: Add go-github-com-stathat-go. 
* gnu/packages/syncthing.scm (go-github-com-stathat-go): New variable.
 2017-10-12 21:22:47 -04:00
Leo Famulari 0921b23014
gnu: Add go-github-com-oschwald-geoip2-golang. 
* gnu/packages/syncthing.scm (go-github-com-oschwald-geoip2-golang): New
variable.
 2017-10-12 21:22:47 -04:00
Leo Famulari a57778f585
gnu: Add go-github-com-oschwald-maxminddb-golang. 
* gnu/packages/syncthing.scm (go-github-com-oschwald-maxminddb-golang): New
variable.
 2017-10-12 21:22:47 -04:00
Leo Famulari bde48edc0f
gnu: Add go-golang-org-x-sys-unix. 
* gnu/packages/syncthing.scm (go-golang-org-x-sys-unix): New variable.
 2017-10-12 21:22:47 -04:00
Leo Famulari 4a9c4dbe3b
gnu: Add go-github-com-minio-sha256-simd. 
* gnu/packages/syncthing.scm (go-github-com-minio-sha256-simd): New variable.
 2017-10-12 21:22:47 -04:00
Leo Famulari 340e1a9a24
gnu: Add go-github-com-lib-pq. 
* gnu/packages/syncthing.scm (go-github-com-lib-pq): New variable.
 2017-10-12 21:22:46 -04:00
Leo Famulari 7577a1d520
gnu: Add go-github-com-kardianos-osext. 
* gnu/packages/syncthing.scm (go-github-com-kardianos-osext): New variable.
 2017-10-12 21:22:46 -04:00
Leo Famulari 7b92093d18
gnu: Add go-github-com-jackpal-gateway. 
* gnu/packages/syncthing.scm (go-github-com-jackpal-gateway): New variable.
 2017-10-12 21:22:46 -04:00
Leo Famulari b32eab0b4c
gnu: Add go-github-com-golang-snappy. 
* gnu/packages/syncthing.scm (go-github-com-golang-snappy): New variable.
 2017-10-12 21:22:46 -04:00
Leo Famulari ede4f50c6b
gnu: Add go-github-com-golang-groupcache-lru. 
* gnu/packages/syncthing.scm (go-github-com-golang-groupcache-lru): New
variable.
 2017-10-12 21:22:46 -04:00
Leo Famulari 3a4d3838d6
gnu: Add go-github-com-gogo-protobuf. 
* gnu/packages/syncthing.scm (go-github-com-gogo-protobuf): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari 07e88fc63b
gnu: Add go-github-com-gogo-protobuf-protoc-gen-gogo. 
* gnu/packages/syncthing.scm (go-github-com-gogo-protobuf-protoc-gen-gogo):
New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari 4d93ebb313
gnu: Add go-github-com-gobwas-glob. 
* gnu/packages/syncthing.scm (go-github-com-gobwas-glob): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari a3a5b01240
gnu: Add go-github-com-edsrzf-mmap-go. 
* gnu/packages/syncthing.scm (go-github-com-edsrzf-mmap-go): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari ab3e15899c
gnu: Add go-github-com-d4l3k-messagediff. 
* gnu/packages/syncthing.scm (go-github-com-d4l3k-messagediff): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari 1e28085e76
gnu: Add go-github-com-calmh-xdr. 
* gnu/packages/syncthing.scm (go-github-com-calmh-xdr): New variable.
 2017-10-12 21:22:45 -04:00
Leo Famulari add56f3469
gnu: Add go-github-com-calmh-du. 
* gnu/packages/syncthing.scm (go-github-com-calmh-du): New variable.
 2017-10-12 21:22:44 -04:00
Leo Famulari 67b468182a
gnu: Add go-github-com-bkaradzic-go-lz4. 
* gnu/packages/syncthing.scm (go-github-com-bkaradzic-go-lz4): New variable.
 2017-10-12 21:22:44 -04:00
Leo Famulari 56a37713c3
gnu: Add go-github-com-audriusbutkevicius-go-nat-pmp. 
* gnu/packages/syncthing.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-10-12 21:22:44 -04:00
Ricardo Wurmus b3936f35ae
gnu: clustal-omega: Update to 1.2.4. 
* gnu/packages/bioinformatics.scm (clustal-omega): Update to 1.2.4.
 2017-10-12 23:54:54 +02:00
Ludovic Courtès e2491f2bd4
gnu: Add trailing slash to 'search.cpan.org' home pages. 
* gnu/packages/perl.scm: Add trailing slash to 'search.cpan.org' home
pages.
 2017-10-12 23:47:48 +02:00
Ludovic Courtès 9f9c36f5c4
gnu: Update home page URLs for Xorg packages. 
* gnu/packages/xorg.scm (imake, lndir, libxshmfence)
(xorg-rgb, xinit, xterm): Update 'home-page' following redirects.
 2017-10-12 23:47:48 +02:00
Efraim Flashner e37415917c
gnu: python-psycopg2: Update to 2.7.3.1. 
* gnu/packages/python.scm (python-psycopg2): Update to 2.7.3.1.
[inputs]: Replace postgresql@9.6 with postgresql.
 2017-10-13 00:00:42 +03:00
Efraim Flashner 4e169fc67a
gnu: python-psycopg2: Use postgresql@9.6. 
* gnu/packages/python.scm (python-psycopg2)[inputs]: Replace postgresql
with postgresql@9.6.
 2017-10-12 23:39:36 +03:00
Efraim Flashner 7658d89bb7
gnu: Add postgresql@9.6. 
* gnu/packages/databases.scm (postgresql@9.6): New variable.
 2017-10-12 23:39:35 +03:00
Christopher Baines ee8aab1f8d
gnu: Add python-jupyter-console as input to python-ipython. 
This fixes running ipython console and ipython3 console, as the
jupyter_console package is missing.

As python-ipython is an input to python-jupyter-console, use a modified
version of the package which doesn't have this input.

* gnu/packages/python.scm (python-jupyter-console-minimal): New variable.
  (python-ipython)[propagated-inputs]: Replace python-jupyter-console with
  python-jupyter-console-minimal.
 2017-10-12 20:23:25 +01:00
Marius Bakke db314bf44e
gnu: wireshark: Minor package improvements. 
* gnu/packages/networking.scm (wireshark)[inputs]: Move QTTOOLS ...
[native-inputs]: ... here.
[home-page]: Remove duplicate.
 2017-10-12 20:32:09 +02:00
Marius Bakke 453361b374
gnu: wireshark: Update to 2.4.2. 
* gnu/packages/networking.scm (wireshark): Update to 2.4.2.
 2017-10-12 20:25:38 +02:00
Marius Bakke 24384c39ad
gnu: xorg-server: Update to 1.19.5. [security fixes] 
Fixes CVE-2017-{12176..12187}.  See
<https://lists.x.org/archives/xorg-announce/2017-October/002814.html>

* gnu/packages/xorg.scm (xorg-server): Update to 1.19.5.
 2017-10-12 20:02:39 +02:00
Marius Bakke fc0ed8c9c9
Revert "gnu: xorg-server: Make the test-variant visible." 
Hiding/unhiding changes the derivation and thus this caused too many rebuilds
for 'master'.

This reverts commit 8cf892e6cd.
 2017-10-12 19:35:53 +02:00
Marius Bakke 0bf6212338
gnu: libextractor: Update to 1.5. 
* gnu/packages/gnunet.scm (libextractor): Update to 1.5.
 2017-10-12 19:24:59 +02:00
Marius Bakke d636fd99c3
gnu: ccid: Update to 1.4.28. 
* gnu/packages/security-token.scm (ccid): Update to 1.4.28.
 2017-10-12 19:24:59 +02:00
Marius Bakke 2a087882b1
gnu: mesa: Disable imx driver for armhf-linux. 
* gnu/packages/gl.scm (mesa)<#:configure-flags>: Don't build imx driver.
 2017-10-12 19:24:58 +02:00
Efraim Flashner 5acd59ee12
gnu: qt: Update to 5.9.2. 
* gnu/packages/qt.scm (qt): Update to 5.9.2.
[outputs]: Add 'examples'.
[source]: Update 3rd party code to unbundle.
[inputs]: Add bluez, double-conversion, gstreamer, gst-plugins-base,
jasper, libinput-minimal, libtiff, libwebp, libxext, wayland. Replace
pcre with pcre2.
[arguments]: Re-enable parallel building. Update build flags.
 2017-10-12 20:00:19 +03:00
Ludovic Courtès aad8a14300
services: cleanup: Remove Shadow lock files from /etc. 
Partly fixes <https://bugs.gnu.org/28772>.
Reported by Oleg Pykhalov <go.wigust@gmail.com>.

* gnu/services.scm (cleanup-gexp): Remove /etc/{passwd,group}.lock and
/etc/.pwd.lock.
 2017-10-12 17:51:41 +02:00
Ricardo Wurmus c6643f2d52
gnu: f-seq: Truncate version string. 
* gnu/packages/bioinformatics.scm (f-seq)[version]: Truncate commit part of
the version string.
 2017-10-12 08:43:54 +02:00
Ludovic Courtès 7ad81b8b67
gnu: totem: Update to 3.26.0. 
* gnu/packages/gnome.scm (totem): Update to 3.26.0.
[source]: Add 'patches' field.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[native-inputs]: Add GTK+:bin and GLIB:bin.
[arguments]: Pass #:glib-or-gtk?.  Adjust #:configure-flags to new
syntax.
* gnu/packages/patches/totem-meson-easy-codec.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-10-11 23:00:46 +02:00
Ludovic Courtès b27ce4164a
services: gnome: Register more polkit actions. 
This should allow more operations such as changing the system date and
time via the Control Center (reported at
<https://lists.gnu.org/archive/html/help-guix/2016-09/msg00059.html>),
performing "file operations" via gvfs, and interacting with processes
using the System Monitor.

* gnu/services/desktop.scm (gnome-polkit-settings): New procedure.
(gnome-desktop-service-type): Use it in POLKIT-SERVICE-TYPE extension.
 2017-10-11 23:00:46 +02:00
Tobias Geerinckx-Rice 22345a8ed7
gnu: mobile-broadband-provider-info: Update to 20170310. 
* gnu/packages/gnome.scm (mobile-broadband-provider-info): Update to 20170310.
 2017-10-11 21:53:37 +02:00
Tobias Geerinckx-Rice be84a1231e
gnu: dovecot: Update to 2.2.33.1. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.1.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice 3bf42e22b3
gnu: gparted: Update to 0.30.0. 
* gnu/packages/disk.scm (gparted): Update to 0.30.0.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice f9bd6b3aef
gnu: evince: Update to 3.26.0. 
* gnu/packages/gnome.scm (evince): Update to 3.26.0.
 2017-10-11 21:53:36 +02:00
Tobias Geerinckx-Rice f51ea1cd61
gnu: orca: Update to 3.26.0. 
gnu/packages/gnome.scm (orca): Update to 3.26.0.
 2017-10-11 21:53:35 +02:00
Thomas Danckaert de47cfed13
gnu: bluez: Disable unpredictable test on armhf. 
* gnu/packages/linux.scm (bluez): [arguments] Add phase to skip a test instead
of marking it as XFAIL.
 2017-10-11 21:44:06 +02:00
Ricardo Wurmus 01d87d3c18
gnu: rcas-web: Update to 0.0.4. 
* gnu/packages/bioinformatics.scm (rcas-web): Update to 0.0.4.
 2017-10-11 21:37:37 +02:00
Leo Famulari 5781c7dd27
gnu: mpg123: Update to 1.25.7. 
* gnu/packages/mp3.scm (mpg123): Update to 1.25.7.
 2017-10-11 08:24:13 -04:00
Ludovic Courtès 50fcf37c13
doc: Give an example with a FAT UUID. 
* gnu/system/examples/lightweight-desktop.tmpl <file-systems>: Add a
UUID for the /boot/efi partition.
* doc/guix.texi (Using the Configuration System): Mention it.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès 03f66aea63
uuid: Change "fat32" to "fat". 
* gnu/system/uuid.scm (%fat32-endianness): Rename to...
(%fat-endianness): ... this.
(fat32-uuid->string): Rename to...
(fat-uuid->string): ... this.
(%fat32-uuid-rx): Rename to..
(%fat-uuid-rx): ... this.
(string->fat32-uuid): Rename to...
(string->fat-uuid): ... this.
(%uuid-parsers, %uuid-printers): Add 'fat16.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès 88235675fc
file-systems: Add support for FAT16. 
* gnu/build/file-systems.scm (check-fat32-file-system): Rename to...
(check-fat-file-system): ... this.
(check-file-system): Adjust accordingly.
(fat16-superblock?, read-fat16-superblock)
(fat16-superblock-uuid, fat16-superblock-volume-name): New procedures.
(%partition-label-readers, %partition-uuid-readers): Add FAT16.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès 9976c76aab
file-systems: Preserve UUID types when serializing. 
Reported by Roel Janssen <roel@gnu.org>
at <https://lists.gnu.org/archive/html/help-guix/2017-09/msg00094.html>.

* gnu/system/file-systems.scm (file-system->spec): When DEVICE is a
UUID, serialize it in a way that preserves its type.
(spec->file-system): Adjust accordingly.
* gnu/build/file-systems.scm (canonicalize-device-spec): Add case for
when SPEC is 'uuid?'.
 2017-10-11 11:12:33 +02:00
Ludovic Courtès 1c65cca574
file-systems: 'mount-file-system' now takes a <file-system> object. 
* gnu/build/file-systems.scm (mount-file-system): Rename 'spec' to 'fs'
and assume it's a <file-system>.
* gnu/build/linux-boot.scm (boot-system): Assume MOUNTS is a list of
<file-system> and adjust accordingly.
* gnu/build/linux-container.scm (mount-file-systems): Remove
'file-system->spec' call.
* gnu/services/base.scm (file-system-shepherd-service): Add
'spec->file-system' call.  Add (gnu system file-systems) to 'modules'.
* gnu/system/linux-initrd.scm (raw-initrd): Use (gnu system
file-systems).  Add 'spec->file-system' call for #:mounts.
 2017-10-11 11:12:33 +02:00
Theodoros Foradis f26af33aec
gnu: Add freehdl. 
* gnu/packages/engineering.scm (freehdl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis 91cabd3e58
gnu: Add xyce-parallel. 
* gnu/packages/engineering.scm (trilinos-parallel-xyce)
(xyce-parallel): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis 1da02b6a49
gnu: Add xyce-serial. 
* gnu/packages/engineering.scm (trilinos-serial-xyce)
(xyce-serial): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Theodoros Foradis b509efb385
gnu: Add lapack-3.5. 
* gnu/packages/maths.scm (lapack-3.5): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-11 11:12:33 +02:00
Ricardo Wurmus 22d1060eff
gnu: python-rpy2: Ignore test results. 
* gnu/packages/python.scm (python-rpy2)[arguments]: Ignore test failures.
 2017-10-11 11:06:05 +02:00
Roel Janssen 6de897ac5a
gnu: Add r-ggdendro. 
* gnu/packages/statistics.scm (r-ggdendro): New variable.
 2017-10-11 10:02:08 +02:00
Mark H Weaver 2f44e7b036
gnu: linux-libre@4.9: Update to 4.9.54. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.54.
 2017-10-11 00:39:27 -04:00
Mark H Weaver dac1d8efd4
gnu: linux-libre@4.4: Update to 4.4.91. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.91.
 2017-10-11 00:38:46 -04:00
Tobias Geerinckx-Rice c3bece41b7
gnu: dovecot: Update to 2.2.33. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.33.
 2017-10-10 23:42:35 +02:00
Ludovic Courtès db9c49f499
gnu: games: Remove unneeded import. 
Fixes a regression introduced in
42abb842f6.

* gnu/packages/games.scm: Remove unneeded (guix build utils) import,
which led to a name clash on 'which'.
 2017-10-10 23:12:04 +02:00
Troy Sankey 3f81ca324b
gnu: alot: Update to 0.5.1. 
* gnu/packages/mail.scm (alot): Update to 0.5.1.
[arguments]: Enable tests.
[native-inputs]: Add python2-mock.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey c1578ad063
gnu: python-twisted: Update to 17.1.0. 
* gnu/packages/python.scm (python-twisted): Update to 17.1.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey 0cd83b4e00
gnu: Add python-incremental. 
* gnu/packages/python.scm (python-incremental, python2-incremental): New
variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Troy Sankey 96cb5ca1f2
gnu: Add python-automat. 
* gnu/packages/python.scm (python-automat, python2-automat): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:41 +02:00
Ricardo Wurmus 6414410d7a
gnu: Add python-graphviz. 
* gnu/packages/graphviz.scm (python-graphviz, python2-graphviz): New
variables.
 2017-10-10 23:09:40 +02:00
Troy Sankey fd8ff99aa7
gnu: Add python-m2r. 
* gnu/packages/python.scm (python-m2r, python2-m2r): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Troy Sankey 9074bac139
gnu: Add python-constantly. 
* gnu/packages/python.scm (python-constantly, python2-constantly): New
variables.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Troy Sankey bb3b4b4ee9
gnu: Add python-attrs. 
* gnu/packages/python.scm (python-attrs, python2-attrs): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-10-10 23:09:40 +02:00
Julien Lepiller 4b8b4418e6
services: vpn: Fix default tls-auth configuration. 
* gnu/services/vpn.scm (serialize-tls-auth): Fix serialization error when
tls-auth is disabled.
 2017-10-10 22:06:08 +02:00
Julien Lepiller 262a4d335a
gnu: Add java-fasterxml-jackson-dataformat-xml. 
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-xml): New
variable.
 2017-10-10 22:05:59 +02:00
Julien Lepiller 40f193f316
gnu: Add java-woodstox-core. 
* gnu/packages/java.scm (java-woodstox-core): New variable.
 2017-10-10 22:05:57 +02:00
Julien Lepiller 6fd07b98b1
gnu: Add java-stax2-api. 
* gnu/packages/java.scm (java-stax2-api): New variable.
 2017-10-10 22:05:55 +02:00
Julien Lepiller 087c8fd2c0
gnu: Add java-fasterxml-jackson-dataformat-yaml. 
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-yaml): New
variable.
 2017-10-10 22:05:52 +02:00
Julien Lepiller 0f296d3747
gnu: Add java-snakeyaml. 
* gnu/packages/java.scm (java-snakeyaml): New variable.
 2017-10-10 22:05:50 +02:00
Julien Lepiller d57d8b89bb
gnu: Add java-fasterxml-jackson-modules-base-jaxb. 
* gnu/packages/java.scm (java-fasterxml-jackson-modules-base-jaxb): New
variable.
 2017-10-10 22:05:45 +02:00
Julien Lepiller f234c7a065
gnu: Add java-fasterxml-jackson-databind. 
* gnu/packages/java.scm (java-fasterxml-jackson-databind): New variable.
 2017-10-10 22:05:43 +02:00
Julien Lepiller 0b5481dfd3
gnu: Add java-fasterxml-jackson-core. 
* gnu/packages/java.scm (java-fasterxml-jackson-core): New variable.
 2017-10-10 22:05:40 +02:00
Julien Lepiller cb05f60d4a
gnu: Add java-fasterxml-jackson-annotations. 
* gnu/packages/java.scm (java-fasterxml-jackson-annotations): New
variable.
 2017-10-10 22:05:34 +02:00
Julien Lepiller 4496d77fb4
gnu: Add java-ops4j-pax-exam-core-junit. 
* gnu/packages/java.scm (java-ops4j-pax-exam-core-junit): New variable.
 2017-10-10 22:05:31 +02:00
Julien Lepiller 7a7c2b7556
gnu: Add java-ops4j-pax-exam-core-spi. 
* gnu/packages/java.scm (java-ops4j-pax-exam-core-spi): New variable.
 2017-10-10 22:05:29 +02:00
Julien Lepiller e179add07b
gnu: Add java-ops4j-pax-exam-core. 
* gnu/packages/java.scm (java-ops4j-pax-exam-core): New variable.
 2017-10-10 22:05:26 +02:00
Julien Lepiller 25aef81d26
gnu: Add java-ops4j-pax-tinybundles. 
* gnu/packages/java.scm (java-ops4j-pax-tinybundles): New variable.
 2017-10-10 22:05:23 +02:00
Julien Lepiller 5f26a13125
gnu: Add java-aqute-bndlib. 
* gnu/packages/java.scm (java-aqute-bndlib): New variable.
 2017-10-10 22:05:21 +02:00
Julien Lepiller 60ba297861
gnu: Add java-aqute-libg. 
* gnu/packages/java.scm (java-aqute-libg): New variable.
 2017-10-10 22:05:18 +02:00
Julien Lepiller e1edf42e82
gnu: Add java-aqute-bnd-annotation. 
* gnu/packages/java.scm (java-aqute-bnd-annotation): New variable.
 2017-10-10 22:05:16 +02:00
Julien Lepiller 214fcd8a91
gnu: Add java-ops4j-base-spi. 
* gnu/packages/java.scm (java-ops4j-base-spi): New variable.
 2017-10-10 22:05:13 +02:00
Julien Lepiller 0edf8cf086
gnu: Add java-ops4j-base-store. 
* gnu/packages/java.scm (java-ops4j-base-store): New variable.
 2017-10-10 22:05:10 +02:00
Julien Lepiller 60dcec7abb
gnu: Add java-ops4j-base-util-property. 
* gnu/packages/java.scm (java-ops4j-base-util-property): New variable.
 2017-10-10 22:05:08 +02:00
Julien Lepiller 559919c1d8
gnu: Add java-ops4j-base-util. 
* gnu/packages/java.scm (java-ops4j-base-util): New variable.
 2017-10-10 22:05:04 +02:00
Julien Lepiller 322d349a11
gnu: Add java-ops4j-base-io. 
* gnu/packages/java.scm (java-ops4j-base-io): New variable.
 2017-10-10 22:05:01 +02:00
Julien Lepiller b2353495cb
gnu: Add java-ops4j-base-monitors. 
* gnu/packages/java.scm (java-ops4j-base-monitors): New variable.
 2017-10-10 22:04:58 +02:00
Julien Lepiller 77a4f1ae31
gnu: Add java-ops4j-base-lang. 
* gnu/packages/java.scm (java-ops4j-base-lang): New variable.
 2017-10-10 22:04:41 +02:00
Marius Bakke 1c055d7258
Merge branch 'staging' 2017-10-10 21:44:32 +02:00
Marius Bakke 565e24c4e4
gnu: libxfont2: Graft fixes for CVE-2017-13720, CVE-2017-13722. 
This is a followup to 97ecd75e28.

* gnu/packages/xorg.scm (libxfont2)[source](patches): Remove.
[replacement]: New field.
(libxfont2/fixed): New variable.
 2017-10-10 20:09:20 +02:00
Marius Bakke 8cf892e6cd
gnu: xorg-server: Make the test-variant visible. 
* gnu/packages/xorg.scm (xorg-server-1.19.3): Remove 'hidden-package'.
 2017-10-10 20:04:51 +02:00
Marius Bakke 97ecd75e28
gnu: libxfont: Fix CVE-2017-13720, CVE-2017-13722. 
* gnu/packages/patches/libxfont-CVE-2017-13720.patch,
  gnu/packages/patches/libxfont-CVE-2017-13722.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/xorg.scm (libxfont, libxfont2)[source]: Use them.
 2017-10-10 19:34:02 +02:00
Marius Bakke 1066696dcc
gnu: lftp: Update to 4.8.3. 
* gnu/packages/ftp.scm (lftp): Update to 4.8.3.
 2017-10-10 18:38:02 +02:00
Marius Bakke b84a80793a
gnu: libnl: Update to 3.4.0. 
* gnu/packages/linux.scm (libnl): Update to 3.4.0.
 2017-10-10 18:38:02 +02:00
Marius Bakke bd6d0eba67
gnu: sddm: Update to 0.16.0. 
* gnu/packages/display-managers.scm (sddm): Update to 0.16.0.
[source]: Switch to '.xz' tarball.
 2017-10-10 18:38:01 +02:00
Marius Bakke f51befedbb
gnu: libreoffice: Don't replace "/bin/sh" reference with bash. 
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Use (which "sh")
instead of (which "bash") in /bin/sh substitution.
 2017-10-10 18:38:01 +02:00
Marius Bakke 832735965d
gnu: vigra: Update to 1.11.1. 
* gnu/packages/image.scm (vigra): Update 1.11.1.
[source]<uri>: Don't hard-code version.
[home-page]: Change to <https://ukoethe.github.io/vigra/>.
 2017-10-10 18:38:01 +02:00
Marius Bakke 7cb3e9d3fc
gnu: libzmf: Update to 0.0.2. 
* gnu/packages/libreoffice.scm (libzmf): Update to 0.0.2.
 2017-10-10 18:38:01 +02:00
Marius Bakke 37a68784a6
gnu: libwps: Update to 0.4.7. 
* gnu/packages/libreoffice.scm (libwps): Update to 0.4.7.
[arguments]: Remove.
 2017-10-10 18:38:01 +02:00
Marius Bakke c334058f6e
gnu: libmwaw: Update to 0.3.12. 
* gnu/packages/libreoffice.scm (libmwaw): Update to 0.3.12.
[source](patches): Remove.
[arguments]: Remove.
* gnu/packages/patches/libmwaw-CVE-2017-9433.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-10-10 18:38:01 +02:00
Marius Bakke cab4188f8b
gnu: libodfgen: Update to 0.1.6. 
* gnu/packages/libreoffice.scm (libodfgen): Update to 0.1.6.
 2017-10-10 18:38:00 +02:00
Marius Bakke 5124e63775
gnu: libvisio: Update to 0.1.5. 
* gnu/packages/patches/libvisio-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libreoffice.scm (libvisio): Update to 0.1.5.
[source]: Add 'libvisio-fix-tests.patch'.
[arguments]: Remove.
 2017-10-10 18:38:00 +02:00
Marius Bakke 2036709b7f
gnu: libpagemaker: Update to 0.0.3. 
* gnu/packages/libreoffice.scm (libpagemaker): Update to 0.0.3.
[arguments]: Remove.
 2017-10-10 18:38:00 +02:00
Marius Bakke e9d8b8872b
gnu: libfreehand: Update to 0.1.2. 
* gnu/packages/libreoffice.scm (libfreehand): Update to 0.1.2.
[native-inputs]: Add CPPUNIT.
[inputs]: Add ICU4C and LCMS.  New field.
 2017-10-10 18:38:00 +02:00
Marius Bakke ae443ec1fa
gnu: libexttextcat: Update to 3.4.5. 
* gnu/packages/libreoffice.scm (libexttextcat): Update to 3.4.5.
 2017-10-10 18:38:00 +02:00
Marius Bakke c6234e8ac8
gnu: libetonyek: Fix FTBFS with later liblangtag. 
* gnu/packages/libreoffice.scm (libetonyek)[source]: Add upstream patch.
 2017-10-10 18:38:00 +02:00
Marius Bakke 603231c1c3
gnu: liblangtag: Update to 0.6.2. 
* gnu/packages/libreoffice.scm (liblangtag): Update to 0.6.2.
 2017-10-10 18:37:59 +02:00
Marius Bakke d35db297e7
gnu: libcdr: Update to 0.1.4. 
* gnu/packages/libreoffice.scm (libcdr): Update to 0.1.4.
[native-inputs]: Add CPPUNIT.
 2017-10-10 18:37:59 +02:00
Marius Bakke feef3b2a08
gnu: libwpg: Update to 0.3.2. 
* gnu/packages/libreoffice.scm (libwpg): Update to 0.3.2.
 2017-10-10 18:37:59 +02:00
Marius Bakke 3f6c5b831a
gnu: libwpd: Update to 0.10.2. 
* gnu/packages/libreoffice.scm (libwpd): Update to 0.10.2.
 2017-10-10 18:37:59 +02:00
Marius Bakke 1c7c2506a8
gnu: librevenge: Update to 0.0.4. 
* gnu/packages/libreoffice.scm (librevenge): Update to 0.0.4.
 2017-10-10 18:37:59 +02:00
Marius Bakke 23e12d9d4f
gnu: rofi: Update to 1.4.1. 
* gnu/packages/check.scm (check-0.11.0): New variable.
* gnu/packages/xdisorg.scm (rofi): Update to 1.4.1.
[inputs]: Add LIBRSVG.
[native-inputs]: Add BISON, CHECK-0.11.0 and FLEX.
 2017-10-10 18:37:59 +02:00
Marius Bakke 2e957aae25
gnu: feh: Update to 2.21. 
* gnu/packages/image-viewers.scm (feh): Update to 2.21.
 2017-10-10 18:37:59 +02:00
Leo Famulari 550d88cf24
gnu: ghostscript: Replace with 9.22 [security fixes]. 
Fixes CVE-2017-{7948,7975,8908,9216,9610,9611,9612,9618,9619,9620,9726,9727,
9739,9740,9835}.

* gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field.
(ghostscript-9.22): New variables.
 2017-10-10 10:55:01 -04:00
Rutger Helling 231123ee16
gnu: postgresql: Update to 10.0. 
* gnu/packages/databases.scm (postgresql): Update to 10.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-10 10:33:26 -04:00
Efraim Flashner ffb4da7ad5
gnu: mesa: Disable svga driver on aarch64. 
* gnu/packages/gl.scm (mesa)[arguments]: Remove svga from aarch64's
gallium drivers.
 2017-10-10 16:20:55 +03:00
Adonay Felipe Nogueira 42abb842f6
gnu: red-eclipse: Add store "data" package path as default. 
* gnu/packages/games.scm (red-eclipse): Remove extra spaces. Make version
respect documentation.
[arguments]: Add "prefix" to make-flags. Add
"add-store-data-package-path-as-default" phase. Improve "copy-data" phase.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-10-10 08:25:45 -04:00
Ricardo Wurmus d30f920c04
gnu: ardour: Update to 5.12. 
* gnu/packages/audio.scm (ardour): Update to 5.12.
 2017-10-10 14:14:13 +02:00
Ricardo Wurmus 1aadd5d9c1
gnu: guitarix: Update to 0.36.0. 
* gnu/packages/audio.scm (guitarix): Update to 0.36.0.
 2017-10-10 14:14:12 +02:00
Tobias Geerinckx-Rice 16123d1dee
gnu: zstd: Update to 1.3.2. 
* gnu/packages/compression.scm (zstd): Update to 1.3.2.
[source]: Remove snippet.
[license]: Add gpl2, gpl3+, and expat to the list.
 2017-10-10 13:33:18 +02:00
Efraim Flashner f18c94705b
gnu: modular-qt: Update to 5.9.2. 
* gnu/packages/qt.scm (qtbase. qtsvg, qtimageformats, qtx11extras,
qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors,
qtmultimedia, qtwayland, qtserialport, qtserialbus, qtwebchannel,
qtlocation, qttools, qtscript, qtquickcontrols, qtquickcontrols2,
qtgraphicaleffects, qtgamepad, qtscxml, qtpurchasing, qtcanvas3d,
qtcharts, qtdatavis3d, qtremoteobjects, qtspeech): Update to 5.9.2.
(qtnetworkauth): Same.
[arguments]: Add phase to help test suite pass.
 2017-10-10 11:41:51 +03:00
Efraim Flashner 9c2c524daf
gnu: qtcharts, qtdatavis3d: Update license information. 
* gnu/packages/qt.scm (qtcharts, qtdatavis3d)[license]: New field.
 2017-10-10 11:41:49 +03:00
Efraim Flashner 96412f3418
gnu: modular-qt: Add synopsis and descriptions for packages. 
* gnu/packages/qt.scm (qtsvg, qtimageformats, qtx11extras,
qtxmlpatterns, qtdeclarative, qtdeclarative-render2d, qtconnectivity,
qtwebsockets, qtsensors, qtmultimedia, qtwayland, qtserialport,
qtserialbus, qtwebchannel, qtlocation, qttools, qtscript,
qtquickcontrols, qtquickcontrols2, qtgraphicaleffects, qtgamepad,
qtscxml, qtpurchasing, qtcanvas3d, qtdatavis3d, qtnetworkauth,
qtremoteobjects, qtspeech)[synopsis, description]: New fields.
 2017-10-10 11:41:47 +03:00
Efraim Flashner 9ed9b44eca
gnu: qtbase: Use libinput-minimal. 
This works around qtbase depending on gtk+.

* gnu/packages/qt.scm (qtbase)[inputs]: Replace libinput with
libinput-minimal.
 2017-10-10 11:41:46 +03:00
Efraim Flashner b84cc89a02
gnu: Add qtspeech. 
* gnu/packages/qt.scm (qtspeech): New variable.
 2017-10-10 11:41:44 +03:00
Efraim Flashner 213238d943
gnu: Add qtremoteobjects. 
* gnu/packages/qt.scm (qtremoteobjects): New variable.
 2017-10-10 11:41:43 +03:00
Efraim Flashner f47d279366
gnu: Add qtnetworkauth. 
* gnu/packages/qt.scm (qtnetworkauth): New variable.
 2017-10-10 11:41:41 +03:00
Thomas Danckaert e84eb77a3a
gnu: Add eid-mw. 
* gnu/packages/security-token.scm (eid-mw): New variable.
 2017-10-10 10:23:23 +02:00
Thomas Danckaert 167a541fd8
gnu: Add libproxy. 
* gnu/packages/networking.scm (libproxy): New variable.
 2017-10-10 10:22:08 +02:00
Thomas Danckaert 2fd26d055a
gnu: Add hdf-java. 
* gnu/packages/maths.scm (hdf-java): New variable.
 2017-10-10 10:22:08 +02:00
Thomas Danckaert 88f256a192
gnu: Add java-slf4-simple. 
* gnu/packages/java.scm (java-slf4j-simple): New variable.
 2017-10-10 10:22:08 +02:00
Thomas Danckaert ce38015066
system: operating-system-etc-service: Set XCURSOR_PATH. 
* gnu/system.scm (operating-system-etc-service): Set XCURSOR_PATH environment
variable so that libxcursor finds cursors in user and system profiles.
* gnu/packages/xorg.scm (libxcursor): Add a TODO for better handling of
XCURSOR_PATH in other profiles.
 2017-10-10 10:22:08 +02:00
Cyril Roelandt 4792a0321a
gnu: python2-unittest2: Update to 1.1.0. 
* gnu/packages/python.scm (python2-unittest2): Update to 1.1.0.
* gnu/packages/patches/python2-unittest2-remove-argparse.patch: New file.
* gnu/local.mk: Add it.
 2017-10-10 02:36:35 +02:00
Cyril Roelandt 1898eaa335
gnu: Add python-traceback2. 
* gnu/packages/python.scm (python-traceback2, python2-traceback2): New
  variables.
 2017-10-10 02:36:35 +02:00
Cyril Roelandt ab28aa229b
gnu: Add python-linecache2. 
* gnu/packages/python.scm (python-linecache2, python2-linecache2): New
  variables.
 2017-10-10 02:36:34 +02:00
Cyril Roelandt 576c0e29cd
gnu: python-netaddr: Fix the source URL. 
* gnu/packages/python.scm (python-netaddr, python2-netaddr): Fix the source URL.
 2017-10-10 02:36:34 +02:00
Cyril Roelandt cb95e5e50e
gnu: Add python2-aniso8601. 
* gnu/packages/python.scm (python2-aniso8601): New variable.
 2017-10-10 02:35:44 +02:00
Cyril Roelandt 64791fae63
gnu: python-aniso8601: Update to 1.3.0. 
* gnu/packages/python.scm (python-aniso8601, python2-aniso8601): Update to 1.3.0.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt 96d63eead2
gnu: python-alembic: Update to 0.9.5. 
* gnu/packages/python.scm (python-alembic, python2-alembic): Update to 0.9.5.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt 79cb661fc7
gnu: python-arrow: Update to 0.10.0. 
* gnu/packages/python.scm (python-arrow, python2-arrow): Update to 0.10.0.
 2017-10-10 02:35:43 +02:00
Cyril Roelandt a9769a290f
gnu: python-apispec: Update to 0.25.3. 
* gnu/packages/python.scm (python-apispec, python2-apispec): Update to 0.25.3.
 2017-10-10 02:35:41 +02:00
Ludovic Courtès 3d9637a93d
gnu: network-manager-openvpn: Update to 1.8.10. 
* gnu/packages/gnome.scm (network-manager-openvpn): Update to 1.8.10.
 2017-10-09 23:15:23 +02:00
Ludovic Courtès 40a17c3ba9
gnu: network-manager: Update to 1.8.4. 
* gnu/packages/gnome.scm (network-manager): Update to 1.8.4.
(network-manager-applet): Likewise.
 2017-10-09 23:15:23 +02:00
Oleg Pykhalov aaba120415
gnu: qemu: Add sysconfdir to configure-flags. 
* gnu/packages/virtualization.scm (qemu): Add sysconfdir to configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-09 23:15:23 +02:00
Feng Shu f03e15ec58
gnu: Add emacs-org2web. 
* gnu/packages/emacs.scm (emacs-org2web): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-09 15:37:55 -04:00
Feng Shu 2f1524d083
gnu: Add emacs-el2org. 
* gnu/packages/emacs.scm (emacs-el2org): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-09 15:37:55 -04:00
Feng Shu 5b38c3e6d8
gnu: Add emacs-mustache. 
* gnu/packages/emacs.scm (emacs-mustache): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-10-09 15:37:55 -04:00
Tobias Geerinckx-Rice 4c4f1871ae
gnu: no-more-secrets: Update to 0.3.3. 
* gnu/packages/games.scm (no-more-secrets): Update to 0.3.3.
 2017-10-09 20:47:54 +02:00
Tobias Geerinckx-Rice 137adfa3f8
gnu: meson: Update to 0.42.1. 
* gnu/packages/build-tools.scm (meson, meson-for-build): Update to 0.42.1.
 2017-10-09 20:40:15 +02:00
Tobias Geerinckx-Rice 51b6a1dd13
gnu: smartmontools: Use HTTPS home page. 
* gnu/packages/admin.scm (smartmontools)[home-page]: Use HTTPS.
 2017-10-09 20:40:15 +02:00
Leo Famulari 719f353405
gnu: mit-krb5: Replace with 1.15.2 [fixes CVE-2017-{11368,11462}]. 
* gnu/packages/kerberos.scm (mit-krb5)[replacement]: New field.
(mit-krb5-1.15.2): New variable.
 2017-10-09 13:30:01 -04:00
ng0 c723271f30
gnu: gnurl: Let the testsuite run test1026. 
* gnu/packages/gnunet.scm (gnurl)[argument]: Remove
'(delete-file "tests/data/test1026")' and the comments related to it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-09 09:32:35 +02:00
ng0 5130e54cab
gnu: gnurl: Update to 7.56.0. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.56.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-08 22:02:00 +02:00
ng0 e076d56a6f
gnu: Add guile-colorized. 
* gnu/packages/guile.scm (guile-colorized): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-08 22:01:55 +02:00
Marius Bakke fa12a41030
gnu: mesa: Disable etnaviv driver. 
* gnu/packages/gl.scm (mesa)<#:configure-flags>: On armhf-linux, disable
etnaviv driver.
 2017-10-08 21:54:24 +02:00
Ludovic Courtès 5e66574a12
activation: Do not create setuid binaries in the store [security fix]. 
Fixes <https://bugs.gnu.org/28751>.

* gnu/build/activation.scm (activate-setuid-programs)[link-or-copy]: Remove.
Use 'copy-file' instead.
 2017-10-08 21:27:48 +02:00
Leo Famulari d265169b36
gnu: borg: Update to 1.1.0. 
* gnu/packages/backup.scm (borg): Update to 1.1.0.
[native-inputs]: Replace python-sphinx-rtd-theme with
python-guzzle-sphinx-theme.
 2017-10-08 13:36:21 -04:00
Leo Famulari d7eb680d85
gnu: Add python-guzzle-sphinx-theme. 
* gnu/packages/python.scm (python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme): New variables.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-10-08 13:36:20 -04:00
Thomas Danckaert 3ceb70e1e6
gnu: kdevelop: Do not hardcode user profile locations in wrapper. 
* gnu/packages/kde.scm (kdevelop): [arguments]: Do not add
  ${HOME}/.guix-profile/{share,lib/plugins} to XDG_DATA_DIRS and
  QT_PLUGIN_PATH when wrapping the executable.
 2017-10-08 19:07:46 +02:00
Christopher Baines 02bc41c4ce
tests: databases: Add a simple test for MySQL. 
Previously, the activation phase for this service caused some systems using it
to not boot. This test checks that it's possible to boot a system using it,
and at least start the service.

* gnu/tests/databases.scm (%mysql-os, %test-mysql): New variables.
  (run-mysql-test): New procedure.
 2017-10-08 17:31:49 +01:00
Christopher Baines b36e06c2b0
linux-initrd: Ensure that the guile used in the initrd is referenced. 
By referencing guile from the initrd output explicitly, it will be present in
the store when this initrd is used. If the exact guile used within the initrd
isn't present in the store, then after root is switched during the boot
process, loading modules (such as (ice-9 popen)) won't work.

This fixes guix-patches bug #28399, "Fix mysql activation, and add a basic
test".

* gnu/system/linux-initrd.scm (expression->initrd)[builder]: Write out a file
  called references in to the initrd output, which includes the store path for
  guile.
 2017-10-08 17:31:49 +01:00
Tobias Geerinckx-Rice fe90a6e08b
gnu: youtube-dl: Update to 2017.10.07. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.10.07.
 2017-10-08 17:49:47 +02:00
Tobias Geerinckx-Rice 71b7950e24
gnu: offlineimap: Update to 7.1.3. 
* gnu/packages/mail.scm (offlineimap): Update to 7.1.3.
 2017-10-08 17:49:47 +02:00
Ludovic Courtès 60273031e8
services: Remove unneeded imported. 
This caused a circular dependency.
Reported by Oleg Pykhalov <go.wigust@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2017-10/msg00021.html>.

* gnu/services/networking.scm: Remove unneeded import of (gnu system
base).
 2017-10-08 17:43:51 +02:00
Tobias Geerinckx-Rice be6a1c2d39
gnu: gnome-calendar: Update to 3.26.2. 
* gnu/packages/gnome.scm (gnome-calendar): Update to 3.26.2.
 2017-10-08 17:06:16 +02:00
Tobias Geerinckx-Rice de1a32a41a
gnu: par2cmdline: Update to 0.7.4. 
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.4.
 2017-10-08 17:06:15 +02:00
Tobias Geerinckx-Rice 5578a9c64b
gnu: munge: Update to 0.5.13. 
* gnu/packages/admin.scm (munge): Update to 0.5.13.
 2017-10-08 17:06:14 +02:00
Kei Kebreau 226e57d674
gnu: aisleriot: Update to 3.22.3. 
* gnu/packages/gnome.scm (aisleriot): Update to 3.22.3.
[inputs]: Use guile-2.2 instead of guile-2.0.
 2017-10-08 11:02:40 -04:00
Christopher Baines 6626c54ddf
gnu: Add missing mongodb patch to local.mk. 
* gnu/local.mk (dist_patch_DATA): Add the
  mongodb-support-unknown-linux-distributions.patch.
 2017-10-08 15:11:04 +01:00
Christopher Baines 834dc83069
web: Add nginx-documentation. 
* gnu/packages/web.scm (nginx): Add comment about updating the documentation.
  (nginx-xslscript): New variable.
  (nginx-documentation): New variable.
 2017-10-08 14:30:30 +01:00
Christopher Baines 024d37d119
perl: Add perl-parse-recdescent. 
* gnu/packages/perl.scm (perl-parse-recdescent): New variable.
 2017-10-08 14:30:25 +01:00
Tomáš Čech 3eabcc7878
gnu: Add missing input to python-py3status and fix call path. 
file is used to determine configuration file encoding and py3status fails to
start when this tool is missing.

* gnu/packages/python.scm (python-py3status)[inputs]: Add file.
  [arguments]: Modify phases to patch py3status to call file with an absolute
  path.
 2017-10-08 13:03:07 +02:00
Oleg Pykhalov 3803331803
gnu: sdl: Add debug output. 
* gnu/packages/sdl.scm (sdl, sdl-gfx, sdl-image, sdl-mixer, sdl-net, sdl-ttf):
  Add debug output.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-10-07 23:01:52 +02:00
ng0 06ebba151b
gnu: getmail: Update to 5.4. 
* gnu/packages/mail.scm (getmail): Update to 5.4.
 2017-10-07 21:56:22 +02:00
Leo Famulari 3202d601a8
gnu: khal: Update to 0.9.8. 
* gnu/packages/calendar.scm (khal): Update to 0.9.8.
[arguments]: Make sure to stop building if the documentation fails to
build.  Skip some failing tests.
 2017-10-07 13:14:50 -04:00
Ludovic Courtès 9070ca4479
gnu: zile: Update to 2.4.14. 
* gnu/packages/zile.scm (zile): Update to 2.4.14.
 2017-10-07 17:08:32 +02:00
Marius Bakke ad3a937dae
Merge branch 'master' into staging 2017-10-07 12:54:40 +02:00
Ben Woodcroft 3ae76f7f57
gnu: vsearch: Update to 2.5.0. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.5.0.
 2017-10-07 09:42:55 +10:00
Mark H Weaver ecfcb2e048
gnu: linux-libre: Update to 4.13.5. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.5.
(%linux-libre-hash): Update hash.
 2017-10-06 18:29:05 -04:00
Mark H Weaver 4556703783
gnu: linux-libre@4.9: Update to 4.9.53. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.53.
 2017-10-06 18:28:26 -04:00
Mark H Weaver 428951b84f
gnu: linux-libre@4.4: Update to 4.4.90. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.90.
 2017-10-06 18:27:45 -04:00
Ludovic Courtès 90d23ed9df
system: Really filter out Linux device names for the store. 
This is a followup to db4e8fd5d4.
Fixes <https://bugs.gnu.org/28445>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/system.scm (ensure-not-/dev): New procedure.
(read-boot-parameters)[ensure-not-/dev]: Remove.
(operating-system-boot-parameters): Use it.
 2017-10-07 00:05:18 +02:00
Christopher Baines 5266ff719e
services: Add MongoDB. 
* gnu/services/databases.scm (%default-mongodb-configuration-file,
  %mongodb-accounts, mongodb-service-type): New variables.
  (<mongodb-configuration>): New record type.
  (mongodb-activation, mongodb-shepherd-service): New procedures.
* gnu/tests/databases.scm (%test-mongodb): New variable.
* doc/guix.texi (Database Services): Add MongoDB documentation.
 2017-10-06 21:24:30 +01:00
Christopher Baines 6bbbca9073
gnu: Add mongodb. 
* gnu/packages/databases.scm (mongodb): New variable.
 2017-10-06 21:24:23 +01:00
Tobias Geerinckx-Rice 4bbc27aca0
gnu: btrfs-progs: Update to 4.13.2. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.13.2.
 2017-10-06 17:33:52 +02:00
Efraim Flashner 2320d4f058
gnu: glibc-locales: Use 'modify-phases' syntax. 
* gnu/packages/base.scm (glibc-locales)[arguments]: Use 'modify-phases'
syntax.
 2017-10-06 16:00:11 +03:00
Ludovic Courtès 1738e24455
gnu: guix: Update development snapshot. 
* gnu/packages/package-management.scm (guix): Update to 8b920d7.
 2017-10-06 14:43:31 +02:00
Marius Bakke 6a317919cf
Merge branch 'master' into staging 2017-10-06 11:03:27 +02:00
Marius Bakke 68932812b8
gnu: libdrm: Disable etnaviv driver. 
* gnu/packages/xdisorg.scm (libdrm)<#:configure-flags>: On armhf-linux, don't
build etnaviv driver.
 2017-10-06 11:00:52 +02:00
Tobias Geerinckx-Rice 8bde6a524e
gnu: dconf: Update to 0.26.1. 
* gnu/packages/gnome.scm (dconf): Update to 0.26.1.
 2017-10-06 01:00:59 +02:00
Tobias Geerinckx-Rice 4a79befe2c
gnu: glade: Update to 3.20.1. 
* gnu/packages/gnome.scm (glade): Update to 3.20.1.
 2017-10-06 01:00:58 +02:00
Tobias Geerinckx-Rice 6c97f17fa1
gnu: tor: Enable directory protocol compression. 
* gnu/packages/tor.scm (tor)[native-inputs]: Add pkg-config.
[inputs]: Add xz and zstd.
 2017-10-06 01:00:49 +02:00
Tobias Geerinckx-Rice b519d46269
gnu: tor: Fix typo. 
* gnu/packages/tor.scm (tor)[inputs]: Move unquote to its operand.
 2017-10-06 01:00:11 +02:00