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Author SHA1 Message Date
Christopher Allan Webber a4ba286baf gnu: python-sqlalchemy: Update to 1.0.12. 
* gnu/packages/python.scm (python-sqlalchemy): Update to 1.0.12.
 2016-02-15 14:02:06 -08:00
Pjotr Prins 552f5c009e gnu: Add slurm. 
* gnu/packages/parallel.scm (slurm): New variable.
* gnu/packages/patches/slurm-configure-remove-nonfree-contribs.patch:
  New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/parallel.scm: Introduce license name space.

Co-authored-by: Andreas Enge <andreas@enge.fr>
 2016-02-15 22:47:47 +01:00
Ben Woodcroft e70f7a2306 gnu: prodigal: Update to 2.6.3. 
* gnu/packages/bioinformatics.scm (prodigal): Update to 2.6.3.
 2016-02-16 07:18:59 +10:00
Efraim Flashner 7fe8ad7616 gnu: polkit-qt: Build with qt-5. 
*gnu/packages/polkit.scm (polkit-qt)[propagated-inputs]: Use qt.
 2016-02-15 20:22:28 +02:00
Efraim Flashner d1cba090a8 gnu: bazaar: Update to 2.7.0. 
* gnu/packages/version-control.scm (bazaar): Update to 2.7.0.
 2016-02-15 19:53:27 +02:00
Ricardo Wurmus 258c0a365e gnu: r-annotationdbi: Update to 1.32.3. 
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.32.3.
 2016-02-15 16:11:22 +01:00
Ricardo Wurmus 3d7a157c62 gnu: Add audit. 
* gnu/packages/admin.scm (audit): New variable.
 2016-02-15 16:06:09 +01:00
Efraim Flashner fdc1b2fd65 gnu: vera: Update to 1.23. 
* gnu/packages/dictionaries.scm (vera): Update to 1.23.
 2016-02-15 15:49:13 +02:00
Efraim Flashner e0ef3708f7 gnu: nano: Update to 2.5.2. 
* gnu/packages/nano.scm (nano): Update to 2.5.2.
 2016-02-15 15:49:13 +02:00
Efraim Flashner 4bc0c634b3 gnu: bitcoin-core: Update to 0.11.2. 
* gnu/packages/finance.scm (bitcoin-core): Update to 0.11.2.
[native-inputs]: Use python-2 instead of python-wrapper.
 2016-02-15 15:46:00 +02:00
Efraim Flashner 87062f75e4 gnu: owncloud-client: Update to 2.1.1. 
* gnu/packages/owncloud.scm (owncloud-client): Update to 2.1.1.
 2016-02-15 15:46:00 +02:00
Ben Woodcroft cf6edaba74 gnu: vsearch: Update to 1.10.0. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 1.10.0.
[origin]: Adapt to changes in bundling of cityhash.
 2016-02-15 22:54:25 +10:00
Ben Woodcroft a64a8c465d gnu: cityhash: Install citycrc.h. 
* gnu/packages/textutils.scm (cityhash)[arguments]: Install citycrc.h.
[version]: Use standardised format, increment to 1.1-2.
 2016-02-15 22:54:12 +10:00
Mark H Weaver e86409c566 gnu: graphite2: Update to 1.3.5. Update home-page and source URI. 
* gnu/packages/fontutils.scm (graphite2): Update to 1.3.5.
  [source, home-page]: Update to reflect upstream move to github.
 2016-02-15 02:51:35 -05:00
Mark H Weaver 4373278ea5 gnu: libsndfile: Update to 1.0.26 [with follow-up fix CVE-2015-7805]. 
Note: The previous fix for CVE-2015-7805 was incomplete.

* gnu/packages/patches/libsndfile-CVE-2014-9496.patch,
  gnu/packages/patches/libsndfile-CVE-2015-7805.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/pulseaudio.scm (libsndfile): Update to 1.0.26.
  [source]: Remove patches.
 2016-02-15 02:51:35 -05:00
Christopher Allan Webber ea79dbb240 gnu: libgcrypt: Update to 1.6.5 [fixes CVE-2015-7511]. 
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.5.
 2016-02-15 02:51:35 -05:00
Leo Famulari 68bcac6b62 gnu: btrfs-progs: Fix license. 
Reported by Tobias Geerinckx-Rice <tobias.geerinckx.rice@gmail.com>

* gnu/packages/linux.scm (btrfs-progs)[license]: Add GPL2 to list of licenses.
 2016-02-14 21:04:05 -05:00
Nils Gillmann acb381566c gnu: font-terminus: Update to 4.40 
* gnu/packages/fonts.scm (font-terminus): Update to 4.40.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-14 20:46:49 -05:00
Andreas Enge b6b07d9de3 gnu: python-ly: Update to 0.9.3. 
* gnu/packages/python.scm (python-ly): Update to 0.9.3.
 2016-02-14 21:49:56 +01:00
Mark H Weaver b042bdc8fd gnu: lxqt: Update source URLs to use HTTPS. 
* gnu/packages/lxqt.scm (libqtxdg, liblxqt, lxqt-common)
  (lxqt-session)[source]: Use HTTPS URLs.
 2016-02-14 08:48:13 -05:00
Efraim Flashner 38b209110e gnu: openbox: Update to 3.6.1. 
* gnu/packages/openbox.scm (openbox): Update to 3.6.1.
 2016-02-14 09:51:47 +02:00
Efraim Flashner 8826fb241e gnu: postgresql: Update to 9.3.11. [fixes CVE-2015-{5288,5289},CVE-2016-{0766,0773}] 
* gnu/packages/databases.scm (postgresql): Update to 9.3.11.
 2016-02-14 09:34:27 +02:00
Jochem Raat 3c697ffda3 gnu: Add baobab. 
* gnu/packages/gnome.scm (baobab): New variable.
 2016-02-13 21:09:42 -05:00
Al McElrath aa0edd3f5b gnu: Add pianobar. 
* gnu/packages/music.scm (pianobar): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-13 18:40:04 -05:00
Christopher Allan Webber cb34dc6c3e gnu: Add python-wtforms 
* gnu/packages/python.scm (python-wtforms, python2-wtforms): New variables.
 2016-02-13 15:03:10 -08:00
Alex Kost 75cd4b053e gnu: iproute: Update to 4.4.0. 
* gnu/packages/linux.scm (iproute): Update to 4.4.0.
 2016-02-13 20:39:34 +03:00
Alex Kost b53e44fb4e gnu: iproute: Use 'modify-phases'. 
* gnu/packages/linux.scm (iproute)[arguments]: Use 'modify-phases'.
 2016-02-13 20:39:34 +03:00
Andreas Enge a42d99f284 gnu: calibre: Update to 2.51.0. 
* gnu/packages/ebook.scm (calibre): Update to 2.51.0.
 2016-02-13 14:34:50 +01:00
Andreas Enge ec4130b7e7 gnu: gnuplot: Update to 5.0.2. 
* gnu/packages/maths.scm (gnuplot): Update to 5.0.2.
 2016-02-13 13:37:49 +01:00
Jan Nieuwenhuizen 8c1088bb0f gnu: lablgtk: Build cmxa libraries. 
* gnu/packages/ocaml.scm (lablgtk)[arguments]: Add the make target "opt"
  to also build *.cmxa files.
 2016-02-13 09:23:20 +01:00
Jan Nieuwenhuizen 6372e336a2 gnu: ocaml: Set search path. 
* gnu/packages/ocaml.scm (ocaml): Register OCAMLPATH as a search path.
 2016-02-13 09:21:58 +01:00
Jan Nieuwenhuizen a747baba00 gnu: Add ocaml-findlib. 
* gnu/packages/ocaml.scm (ocaml-findlib): New variable.
* gnu/packages/patches/ocaml-findlib-make-install.patch: New file.
* gnu-system.am (dist_patch_DATA): Register it.
 2016-02-13 09:15:55 +01:00
Mark H Weaver 3a7261bf96 gnu: gnupg: Add upstream fix for test failures on x86_64. 
Fixes <https://debbugs.gnu.org/22558>.

* gnu/packages/patches/gnupg-simple-query-ignore-status-messages.patch: New
  file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (gnupg)[source]: Add patch.
 2016-02-12 21:02:24 -05:00
Jan Nieuwenhuizen 511539ae81 gnu: Add tclxml. 
* gnu/packages/patches/tclxml-3.2-install.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/tcl.scm (tclxml): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-12 19:13:05 -05:00
Leo Famulari 6cefd53d3e gnu: Split acme into python-acme and python2-acme. 
* gnu/packages/tls.scm (acme): Split variable into...
(python-acme, python2-acme): ...both Python variants.
(letsencrypt)[propagated-inputs]: Update user of renamed variable.
 2016-02-12 18:50:32 -05:00
Leo Famulari 8ad4ae204f gnu: python-wheel: Define 'python2-variant'. 
* gnu/packages/python.scm (python-wheel)[properties]: New field.
(python2-wheel): Use 'strip-python2-variant'.
(python2-requests): Take the result of 'package-with-python2' directly.
* gnu/packages/openstack.scm (python2-requests-mock): Likewise.
(python2-oslosphinx): Likewise.
 2016-02-12 18:50:32 -05:00
Leo Famulari a14600ecfa gnu: python-jsonschema: Define 'python2-variant'. 
* gnu/packages/python.scm (python-jsonschema)[properties]: New field.
(python2-jsonschema): Use 'strip-python2-variant'.
* gnu/packages/openstack.scm (python2-tempest-lib): Take the result of
'package-with-python2' directly.
 2016-02-12 18:50:32 -05:00
Leo Famulari 519e2f4fde gnu: python-cryptography: Define 'python2-variant'. 
* gnu/packages/python.scm (python-cryptography)[properties]: New field.
(python2-cryptography): Use 'strip-python2-variant'.
(python2-pyopenssl): Take the result of 'package-with-python2' directly.
 2016-02-12 18:50:32 -05:00
Jan Nieuwenhuizen 50fe318c3c gnu: Add tcllib. 
* gnu/packages/tcl.scm (tcllib): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-12 18:01:05 -05:00
Jan Nieuwenhuizen e4c38581f3 gnu: tcl: Use tcl/tk license. 
* gnu/packages/tcl.scm (tcl)[license]: Use the tcl/tk license variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-12 18:01:05 -05:00
Ricardo Wurmus 0d0bcaa08e gnu: macs: Update to 2.1.0.20151222. 
* gnu/packages/bioinformatics.scm (macs): Update to 2.1.0.20151222.
 2016-02-12 18:16:16 +01:00
Ricardo Wurmus 43ec07f17c gnu: macs: Use "pypi-uri". 
* gnu/packages/bioinformatics.scm (macs)[source]: Use "pypi-uri" to
  build source URI.
 2016-02-12 18:16:16 +01:00
Ricardo Wurmus b074e7d486 gnu: python2-fastlmm: Update to 0.2.21. 
* gnu/packages/python.scm (python2-fastlmm): Update to 0.2.21.
 2016-02-12 10:58:46 +01:00
Ricardo Wurmus 3f2e9675fb gnu: python2-pysnptools: Update to 0.3.5. 
* gnu/packages/python.scm (python2-pysnptools): Update to 0.3.5.
 2016-02-12 10:58:46 +01:00
Ricardo Wurmus ef9b4c04a4 gnu: python-numpy-bootstrap: Update to 1.10.4. 
* gnu/packages/python.scm (python-numpy-bootstrap): Update to 1.10.4.
 2016-02-12 10:58:46 +01:00
Ricardo Wurmus 1b96f069e6 gnu: python-pandas: Update to 0.16.2. 
* gnu/packages/python.scm (python-pandas): Update to 0.16.2.
 2016-02-12 10:58:46 +01:00
Ni* Gillmann 3ccdd4305e gnu: Add gnunet-gtk. 
* gnu/packages/gnunet.scm (gnunet-gtk): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2016-02-12 10:17:05 +01:00
Ricardo Wurmus 1eb6bbd8c0 gnu: gnunet: Add gstreamer and plugins to inputs. 
* gnu/packages/gnunet.scm (gnunet)[inputs]: Add "gstreamer" and
  "gst-plugins-base".
 2016-02-12 08:09:19 +01:00
Tobias Geerinckx-Rice 3a9cfba879 install: Add btrfs-progs to the image. 
* gnu/system/install.scm (installation-os)[packages]: Add BTRFS-PROGS.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-11 21:39:30 -05:00
Tobias Geerinckx-Rice fc686f9a19 gnu: Add btrfs-progs. 
* gnu/packages/linux.scm (btrfs-progs): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-11 21:02:06 -05:00
Mark H Weaver e57127fbe1 Revert "gnu: nginx: Update to 1.9.11. [fixes CVE-2016-{0742, 0746, 0747}]" 
This reverts commit 759246ad48.
 2016-02-11 16:31:19 -05:00
Mark H Weaver 59d4cf1c58 gnu: icecat: Update bundled graphite2 to 1.3.5 for security fixes. 
* gnu/packages/patches/icecat-update-graphite2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.  Add TODO
  comment about using the system graphite2 in the future.
 2016-02-11 14:59:16 -05:00
Efraim Flashner 759246ad48 gnu: nginx: Update to 1.9.11. [fixes CVE-2016-{0742, 0746, 0747}] 
* gnu/packages/web.scm (nginx): Update to 1.9.11.
 2016-02-11 21:36:43 +02:00
Efraim Flashner d2ca99ccbd gnu: feh: Update to 2.14.1. 
* gnu/packages/feh.scm (feh): Update to 2.14.1.
 2016-02-11 12:46:55 +02:00
Efraim Flashner 9b719875be gnu: obs: Update to 0.13.1. 
* gnu/packages/video.scm (obs): Update to 0.13.1.
 2016-02-11 11:11:44 +02:00
Efraim Flashner 50beb63b7a gnu: fribidi: Update to 0.19.7. 
* gnu/packages/fribidi.scm (fribidi): Update to 0.19.7.
 2016-02-11 11:00:36 +02:00
Efraim Flashner 992b527d52 gnu: alsa-utils: Update to 1.1.0. 
* gnu/packages/linux.scm (alsa-utils): Update to 1.1.0.
 2016-02-11 09:26:55 +02:00
Ricardo Wurmus 138e76972a gnu: zynaddsubfx: Update to 2.5.3. 
* gnu/packages/music.scm (zynaddsubfx): Update to 2.5.3.
 2016-02-11 08:25:03 +01:00
Leo Famulari a2a06c51ab gnu: htop: Update to 2.0.0. 
* gnu/packages/admin.scm (htop): Update to 2.0.0.
 2016-02-11 00:31:10 -05:00
Al McElrath 8a75c589aa gnu: Add notmuch-addrlookup-c. 
* gnu/packages/mail.scm (notmuch-addrlookup-c): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-10 17:08:24 -05:00
Ludovic Courtès c96ba2cf5e install: Do not cache lookup failures. 
Possibly fixes <http://bugs.gnu.org/22209>.

* gnu/system/install.scm (%nscd-minimal-caches)[negative-time-to-live]:
Set to zero.
 2016-02-10 21:47:31 +01:00
Leo Famulari 8823ed4e12 gnu: Fix syntax error in postgresql-service. 
Fixes <http://bugs.gnu.org/22618>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/services/databases.scm (%default-postgres-config): Add missing
quote in default configuration.
 2016-02-10 15:34:11 -05:00
Mark H Weaver 16114c3494 gnu: mit-krb5: Update to 1.13.3; add fixes for CVE-2015-{8629,8630,8631}. 
* gnu/packages/patches/mit-krb5-CVE-2015-2695-pt1.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-2695-pt2.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-2696.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-2697.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-2698-pt1.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-2698-pt2.patch: Delete files.
* gnu/packages/patches/mit-krb5-CVE-2015-8629.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-8630.patch,
  gnu/packages/patches/mit-krb5-CVE-2015-8631.patch,
  gnu/packages/patches/mit-krb5-init-context-null-spnego.patch: New files.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/mit-krb5.scm (mit-krb5): Update to 1.13.3.
  [source]: Update URI to download conventional .tar.gz file.  Add patches.
  [native-inputs]: Remove old patches-as-inputs.
  [arguments]: Remove hacks needed to cope with the older unconventional
  tarball that contained an inner source tarball and signature: Remove
  #:modules argument, and the custom 'unpack' and 'apply-patches' phases.
 2016-02-10 10:41:11 -05:00
Mark H Weaver 42395bf514 gnu: nettle: Update to 3.2 [fixes CVE-2015-{8803,8804,8805}]. 
* gnu/packages/nettle.scm (nettle): Update to 3.2.
 2016-02-10 10:41:11 -05:00
Ludovic Courtès 4ecbf6d282 gnu: haunt: Wrap 'haunt' command so that it finds its modules. 
* gnu/packages/guile.scm (haunt)[arguments]: New field.
 2016-02-10 15:15:17 +01:00
Ludovic Courtès f5582b2c1d system: Selected locale is automatically built. 
Fixes <http://bugs.gnu.org/22572>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/system/locale.scm (%not-dot): New variable.
(denormalize-codeset, locale-name->definition): New procedures.
* gnu/system.scm (locale-name->definition*): New procedure.
(operating-system-locale-directory): Instead of raising an error, add
the missing locale.
* doc/guix.texi (Locales): Adjust accordingly.
 2016-02-10 15:15:17 +01:00
Alex Kost 32e1611206 gnu: emacs-debbugs: Update to 0.9. 
* gnu/packages/emacs.scm (emacs-debbugs): Update to 0.9.
[propagated-inputs]: Add 'emacs-async'.
 2016-02-10 01:34:17 +03:00
Alex Kost b654de6da1 gnu: Add emacs-async. 
* gnu/packages/emacs.scm (emacs-async): New variable.
 2016-02-10 01:34:17 +03:00
Alex Kost 3db5ed11da gnu: magit: Update to 2.5.0. 
* gnu/packages/emacs.scm (magit): Update to 2.5.0.
[propagated-inputs]: Add 'emacs-with-editor'.
[arguments]: Make with WITH_EDITOR_DIR.
 2016-02-10 01:34:17 +03:00
Alex Kost 2b0e43003c gnu: Add emacs-with-editor. 
* gnu/packages/emacs.scm (emacs-with-editor): New variable.
 2016-02-10 01:34:17 +03:00
Pjotr Prins f1957fc145 gnu: Add munge. 
* gnu/packages/admin.scm (munge): New variable.
 2016-02-09 20:43:32 +01:00
Leo Famulari 9bee9d87dc gnu: acme: Disable egg compression. 
* gnu/packages/python.scm (acme)[arguments]: Add
'disable-egg-compression' phase.
 2016-02-08 23:45:06 -05:00
Leo Famulari 0c7320dc89 gnu: letsencrypt and acme: Update to 0.3.0. 
These packages should be updated together.

* gnu/packages/tls.scm (letsencrypt): Update to 0.3.0.
(acme): Update to 0.3.0.
 2016-02-08 23:04:07 -05:00
David Thompson fe65ef54c5 youtube-dl: Update to 2016.02.05.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.02.05.1.
 2016-02-08 21:47:51 -05:00
Ludovic Courtès 939c5c31d6 system: Add Texinfo to '%base-packages'. 
Fixes <http://bugs.gnu.org/22598>.
Reported by myglc2 <myglc2@gmail.com>.

* gnu/system.scm (%base-packages): Add TEXINFO.
 2016-02-08 23:46:46 +01:00
Ludovic Courtès 1f1ff6a0e7 linux-container: Accept file systems with a UUID 'source'. 
* gnu/system/linux-container.scm (containerized-operating-system)[user-file-systems]:
Check whether SOURCE is a string before calling 'string-prefix?'.
 2016-02-08 23:46:46 +01:00
Ludovic Courtès 6eb439070a file-systems: Spawn a Bournish REPL upon fsck failure. 
Fixes <http://bugs.gnu.org/22588>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/build/file-systems.scm (check-file-system): Pass
%BOURNISH-LANGUAGE as the argument to 'start-repl'.
* gnu/services.scm (activation-script): Add (guix build bournish).
* gnu/services/base.scm (file-system-shepherd-service)[imported-modules]:
Likewise.
* gnu/system/linux-container.scm (container-script): Likewise.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Likewise.
 2016-02-08 23:46:46 +01:00
Ludovic Courtès f2e4805b7e Add (guix build bournish) and use it in the initrd. 
* guix/build/bournish.scm: New file.
* Makefile.am (MODULES): Add it.
* gnu/system/linux-initrd.scm (base-initrd): Add (guix build bournish)
and use it.
 2016-02-08 23:46:46 +01:00
Nils Gillmann 423eef362b gnu: add lispf4 
* gnu/packages/lisp.scm (lispf4): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-02-08 15:09:34 -05:00
Mark H Weaver 7fb51d9742 gnu: dbus: Use https source URL. 
* gnu/packages/glib.scm (dbus)[source]: Use https URL.
 2016-02-08 08:59:00 -05:00
Rene Saavedra 8b8775454b gnu: Add nautilus. 
* gnu/packages/gnome.scm (nautilus): New variable.

Co-authored-by: 宋文武 <iyzsong@gmail.com>
 2016-02-08 13:48:16 +08:00
Leo Famulari 16095d2729 gnu: python-pillow: Update to 3.1.1 [fixes CVE-2016-{0740, 0775}]. 
* gnu/packages/python.scm (python-pillow, python2-pillow): Update to 3.1.1.
 2016-02-08 00:25:40 -05:00
Christopher Allan Webber 3d4f9d5cde gnu: Add assword. 
* gnu/packages/password-utils.scm (assword): New variable.
 2016-02-07 14:57:52 -08:00
Christopher Allan Webber 0bdc1671e4 gnu: Add python2-xdo. 
* gnu/packages/python.scm (python2-xdo): New variable.
 2016-02-07 14:57:52 -08:00
Ludovic Courtès 57b7b8cd60 gnu: python-matplotlib: Define 'python2-variant'. 
* gnu/packages/python.scm (python2-numpy): Take the result of
'package-with-python2' directly.
(python2-scipy): Likewise.
(python-matplotlib)[properties]: New field.
(python2-matplotlib): Call 'strip-python2-variant'.
 2016-02-07 23:46:01 +01:00
Ludovic Courtès 48b311b1b3 gnu: python-cython: Define 'python2-variant'. 
* gnu/packages/python.scm (python-cython)[properties]: New field.
(python2-cython): Use 'strip-python2-variant'.
 2016-02-07 23:46:01 +01:00
Ludovic Courtès 7ec42f1d8a gnu: python-pycairo: Define 'python2-variant'. 
* gnu/packages/gtk.scm (python-pycairo)[properties]: New field.
(python2-pycairo): Use 'strip-python2-variant'.
 2016-02-07 23:46:01 +01:00
Ludovic Courtès 00f2bf3433 gnu: python-pygobject: Define 'python2-variant'. 
* gnu/packages/glib.scm (python-pygobject)[properties]: New field.
(python2-pygobject): Use 'strip-python2-variant'.
 2016-02-07 23:46:01 +01:00
Ludovic Courtès 5540929500 gnu: upower: Install man pages. 
* gnu/packages/gnome.scm (upower)[native-inputs]: Add LIBXML2, LIBXSLT,
and DOCBOOK-XSL.
 2016-02-07 23:46:01 +01:00
Efraim Flashner 17d2e86d49 gnu: keepassx: Update to 2.0.2. 
* gnu/packages/password-utils.scm (keepassx): Update to 2.0.2.
 2016-02-07 21:37:00 +02:00
Fabian Harfert 6366cef38d gnu: Add libcanberra-gtk2. 
* gnu/packages/libcanberra.scm (libcanberra/gtk+-2): New variable.
 2016-02-07 16:49:51 +01:00
Efraim Flashner fe476868df gnu: python2-pysqlite: Update to 2.8.1. 
* gnu/packages/python.scm (python2-pysqlite): Update to 2.8.1.
[source]: Change to `pypi uri` syntax.
[home-page]: Update to new homepage.
 2016-02-07 15:59:54 +02:00
Efraim Flashner f2d06d4697 gnu: python2-backport-ssl-match-hostname: Update to 3.5.0.1. 
* gnu/packages/python.scm (python2-backport-ssl-match-hostname):
Update to 3.5.0.1.
[arguments]: Skip tests.
[synopsis]: Update for python version 3.5.x.
 2016-02-07 15:24:43 +02:00
Efraim Flashner ce6c13ee8c gnu: python-cryptography: Update to 1.2.2. 
* gnu/packages/python.scm (python-cryptography): Update to 1.2.2.
[source]: Change to `pypi uri` syntax.
[native-inputs]: Add python-pyasn1, python-pyasn1-modules,
python-hypothesis.
(python2-cryptography)[propagated-inputs]: Add
python2-backport-ssl-match-hostname
 2016-02-07 14:26:57 +02:00
Efraim Flashner b39b33e8c8 gnu: python-cryptography-vectors: Update to 1.2.2. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 1.2.2.
 2016-02-07 13:57:44 +02:00
Efraim Flashner 6fb54e3bd4 gnu: python-pip: Update to 8.0.2. 
* gnu/packages/python.scm (python-pip): Update to 8.0.2.
[source]: Change to `pypi uri` syntax.
 2016-02-07 13:38:16 +02:00
Efraim Flashner 5b669ba1e3 gnu: python-gnupg: Update to 0.3.8. 
* gnu/packages/gnupg.scm (python-gnupg): Update to 0.3.8.
[source]: Change to 'pypi uri` syntax.
 2016-02-07 12:58:54 +02:00
Alex Kost b3fee145df system: Fix EMACSLOADPATH. 
After commit 13fe4891fa, Emacs package
includes "site-start.el", and it has a priority over
"/etc/emacs/site-start.el" on GuixSD because "/etc/emacs" is added to
the end of 'load-path'.

* gnu/system.scm (operating-system-environment-variables): Change
  EMACSLOADPATH to prepend "/etc/emacs" to 'load-path' instead of
  appending.
 2016-02-07 11:24:35 +03:00
宋文武 6588c2834a gnu: curl: Use 'https' URL. 
Reported by marusich on #guix.

* gnu/packages/curl.scm (curl)[source]: Use 'https' URL.
 2016-02-07 10:41:40 +08:00
Christopher Allan Webber 6f74aecdb3 gnu: xdotools: Update to 3.20150503.1 
* gnu/packages/xdisorg.scm (xdotools): Upgrade to 3.20150503.1.
* gnu/packages/patches/xdotool-fix-makefile.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-02-06 15:39:51 -08:00
Ludovic Courtès d9f0788ad2 gnu: guile-next: Update to 2.1.2. 
* gnu/packages/guile.scm (guile-next): Update to 2.1.2.  Add 'snippet'.
 2016-02-06 21:46:25 +01:00
Ludovic Courtès 8c4c2a983e gnu: Add Texinfo 6.1. 
* gnu/packages/texinfo.scm (texinfo-6.1): New variable.
* gnu/packages/emacs.scm (emacs): Add comment about 'info.info'.
 2016-02-06 21:46:25 +01:00
Christopher Allan Webber a05d1d82c0 gnu: Add python-pygpgme 
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme): New variables.
* gnu/packages/patches/pygpgme-disable-problematic-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2016-02-06 11:30:35 -08:00
Mark H Weaver 08cb746f08 gnu: icecat: Re-enable the Ephemeral Diffie-Hellman cipher suites. 
* gnu/packages/patches/icecat-re-enable-DHE-cipher-suites.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
 2016-02-06 08:48:20 -05:00
Ludovic Courtès e7ad0d5862 services: elogind: Extend PAM to use 'pam_elogind.so'. 
Thanks to Andy Wingo <wingo@igalia.com> for explaining this at
<https://lists.gnu.org/archive/html/guix-devel/2015-08/msg00439.html>.

* gnu/services/desktop.scm (pam-extension-procedure): New procedure.
(elogind-service-type): Extend PAM-ROOT-SERVICE-TYPE.
 2016-02-06 12:01:42 +01:00
Ludovic Courtès 12c00bca92 system: pam: 'pam-root-service-type' can be extended with transformations. 
* gnu/system/pam.scm (<pam-configuration>): New record type.
(/etc-entry): Change 'services' parameter' to 'config'.  Honor the
'transform' field of CONFIG.
(extend-configuration): New procedure.
(pam-root-service-type): Use EXTEND-CONFIGURATION as the 'extend'
field.
(pam-root-service): Add #:transform parameter.  Service value is a
<pam-configuration>.
 2016-02-06 12:01:42 +01:00
Ludovic Courtès d7bce31c36 system: pam: Export accessors. 
* gnu/system/pam.scm: Export <pam-service> and <pam-entry> accessors.
 2016-02-06 12:01:42 +01:00
Fabian Harfert b7807bb2fa gnu: Add murrine. 
* gnu/packages/gtk.scm (murrine): New variable.
 2016-02-06 13:35:29 +08:00
Fabian Harfert 9ba5198c4c gnu: Add gtk-engines. 
* gnu/packages/gtk.scm (gtk-engines): New variable.
 2016-02-06 13:32:59 +08:00
Andreas Enge eb2afd000c gnu: r: Drop input lapack. 
* gnu/packages/statistics.scm (r)[inputs]: Drop lapack, which is
  recommended by the manual.
  [arguments]: Adapt configure flags.
 2016-02-05 23:20:43 +01:00
Ludovic Courtès 05c5b16585 services: elogind: Add elogind to the global profile. 
* gnu/services/desktop.scm (elogind-service-type): Extend
PROFILE-SERVICE-TYPE.
 2016-02-05 22:10:42 +01:00
Ludovic Courtès edc891fa76 services: upower: Add upower to the global profile. 
* gnu/services/desktop.scm (upower-service-type): Extend
PROFILE-SERVICE-TYPE.
 2016-02-05 22:10:42 +01:00
Ludovic Courtès 42c97811c9 gnu: vpnc: Make sure 'vpnc-script' finds the commands it needs. 
* gnu/packages/vpn.scm (vpnc)[inputs]: Add NET-TOOLS and IPROUTE.
[arguments]: Use 'modify-phases'.  Wrap 'vpnc-script'.
 2016-02-05 22:10:42 +01:00
Mark H Weaver a7d8c466db gnu: icecat: Update to 38.6.0-gnu1. 
* gnu/packages/patches/icecat-bug-1146335-pt1.patch,
  gnu/packages/patches/icecat-bug-1146335-pt2.patch,
  gnu/packages/patches/icecat-limit-max-buffers-size-for-ANGLE.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt01.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt02.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt03.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt04.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt05.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt06.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt07.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt08.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt09.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt10.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt11.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt12.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt13.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt14.patch,
  gnu/packages/patches/icecat-CVE-2016-1930-pt15.patch,
  gnu/packages/patches/icecat-CVE-2016-1935.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/gnuzilla.scm (icecat): Update to 38.6.0-gnu1.
  [source]: Remove patches.
 2016-02-05 16:00:25 -05:00
Andreas Enge 95b754a17a gnu: r: Drop input openblas. 
* gnu/packages/statistics.scm (r)[inputs]: Drop openblas.
  [arguments]: Adapt configure flags. This makes the build succeed
  on armhf-linux.
 2016-02-05 20:51:39 +01:00
Efraim Flashner 22b0caa3ed gnu: glibmm: Update to 2.46.3. 
* gnu/packages/glib.scm (glibmm): Update to 2.46.3.
 2016-02-05 16:02:26 +02:00
Efraim Flashner 93e3be9abd gnu: gedit: Update to 3.18.3. 
* gnu/packages/gnome.scm (gedit): Update to 3.18.3.
 2016-02-05 16:02:26 +02:00
Efraim Flashner 7965a94a67 gnu: gtksourceview: Update to 3.18.2. 
* gnu/packages/gtk.scm (gtksourceview): Update to 3.18.2.
 2016-02-05 16:02:26 +02:00
Efraim Flashner 5b00397279 gnu: atkmm: Update to 2.24.2. 
* gnu/packages/gtk.scm (atkmm): Update to 2.24.2.
 2016-02-05 16:02:26 +02:00
Efraim Flashner f58219569c gnu: libxml++: Update to 3.0.0. 
* gnu/packages/gnome.scm (libxml++): Update to 3.0.0.
 2016-02-05 16:02:26 +02:00
Efraim Flashner 73836c7de8 gnu: ffmpeg: Update to 2.8.6. 
* gnu/packages/video.scm (ffmpeg): Update to 2.8.6.
 2016-02-05 16:02:26 +02:00
Efraim Flashner e267435787 gnu: vte: Update to 0.42.3. 
* gnu/packages/gnome.scm (vte): Update to 0.42.3.
 2016-02-05 16:02:26 +02:00
Andreas Enge 71ee51a057 gnu: libbluray: Drop unused inputs. 
* gnu/packages/video.scm (libbluray)[inputs]: Remove doxygen, perl and
  texlive. The first one is checked during the configure phase, but no
  documentation is actually built anyway.
 2016-02-05 14:42:13 +01:00
Ludovic Courtès 234ea8a71c service: shepherd: All of the config file is in 'call-with-error-handling'. 
* gnu/services/shepherd.scm (shepherd-configuration-file)[config]: Wrap
all the body in 'call-with-error-handling'.
 2016-02-05 14:01:46 +01:00
Ludovic Courtès 081bd3bd29 service: shepherd: Guard against exceptions raised by 'start'. 
Fixes <http://bugs.gnu.org/22548>.
Reported by Albin <albin@fripost.org>, Mark H Weaver, and Alex Kost.

* gnu/services/shepherd.scm (shepherd-configuration-file)[config]: Guard
against 'service-error?'.
 2016-02-05 14:01:46 +01:00
Ludovic Courtès 1d6b7d5847 guix system: Simply warn if we cannot talk to the shepherd. 
Before that 'open-connection' would return #f, and thus
'current-services' would return a single #f value when its continuation
expects two.

Reported by calher on #guix.

* gnu/services/herd.scm (open-connection): Rethrow system-error
exceptions.
(with-shepherd): Expect CONNECTION to always be true; remove useless
'dynamic-wind'.
* guix/scripts/system.scm (warn-on-system-error): New macro.
(upgrade-shepherd-services): Wrap body in 'warn-on-system-error'.
 2016-02-05 14:01:46 +01:00
Ludovic Courtès 6b55ee8889 gnu: net-tools: Update URLs. 
Reported by Jookia <166291@gmail.com> and Leo Famulari <leo@famulari.name>.

* gnu/packages/linux.scm (net-tools)[home-page]: Switch to SourceForge.
[source]: Add SourceForge and ibiblio.org URLs.
 2016-02-05 14:01:46 +01:00
Tobias Geerinckx-Rice 0f860464bd gnu: Add sdparm. 
* gnu/packages/disk.scm (sdparm): New variable.
 2016-02-05 09:30:29 +01:00
Mark H Weaver b9da375999 gnu: mplayer: Update to 1.2.1. 
* gnu/packages/video.scm (mplayer): Update to 1.2.1.
 2016-02-04 22:06:01 -05:00
Leo Famulari 90bcecc568 gnu: jasper: Add fixes for several security flaws. 
* gnu/packages/patches/jasper-CVE-2007-2721.patch,
gnu/packages/patches/jasper-CVE-2008-3520.patch,
gnu/packages/patches/jasper-CVE-2011-4516-and-CVE-2011-4517.patch,
gnu/packages/patches/jasper-CVE-2014-8137.patch,
gnu/packages/patches/jasper-CVE-2014-8138.patch,
gnu/packages/patches/jasper-CVE-2014-8157.patch,
gnu/packages/patches/jasper-CVE-2014-8158.patch,
gnu/packages/patches/jasper-CVE-2014-9029.patch,
gnu/packages/patches/jasper-CVE-2016-1867.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (jasper)[source]: Add patches.
 2016-02-04 15:09:41 -05:00
Ludovic Courtès a6312f1dd0 install: Add glibc to the global profile. 
Suggested by petter on #guix.

* gnu/system/install.scm (installation-os)[packages]: Add glibc.
 2016-02-04 12:21:34 +01:00
Leo Famulari 202e2e412a gnu: harfbuzz: Update to 1.0.6 [fixes CVE-2016-2052]. 
* gnu/packages/gtk.scm (harfbuzz): Update to 1.0.6.
 2016-02-04 00:15:21 -05:00
Mark H Weaver 5fb205c638 gnu: perl-io-socket-ssl: Add workaround for OpenSSL-1.0.2f. 
* gnu/packages/patches/perl-io-socket-ssl-openssl-1.0.2f-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/web.scm (perl-io-socket-ssl)[source]: Add patch.
 2016-02-04 00:15:21 -05:00
Mark H Weaver 19f339526f gnu: openssl: Update to 1.0.2f [fixes CVE-2015-3197 and CVE-2016-0701]. 
* gnu/packages/tls.scm (openssl): Update to 1.0.2f.
  [arguments]: Remove the 'fix-broken-symlinks' phase.
 2016-02-04 00:15:21 -05:00
Leo Famulari bdbb7c1852 gnu: curl: Update to 7.47.0 [fixes CVE-2016-0755]. 
* gnu/packages/curl.scm (curl): Update to 7.47.0.
 2016-02-04 00:15:21 -05:00
Mark H Weaver dfb9001ad8 linux-initrd: Add serpent_generic and wp512 to the default set of modules. 
Adds modules needed for encrypted root partitions using the Serpent cipher or
Whirlpool digest algorithms.

* gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Add
  "serpent_generic" and "wp512".
 2016-02-03 16:48:06 -05:00
Mark H Weaver cc023e320e linux-initrd: Add hid-generic and hid-apple to the default set of modules. 
Fixes keyboard of MacBook2,1 during early boot, e.g. for typing a password to
mount an encrypted root partition.

* gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Add "hid-generic"
  and "hid-apple".
 2016-02-03 16:43:42 -05:00
Ludovic Courtès 37dd1e6a34 services: 'file-union' makes sure each source file exists. 
Before that, specifying an invalid timezone in 'operating-system' would
lead to a dangling symlink in the 'etc' directory, which in turn would
lead to a kernel panic at boot time.

Reported by pizzaiolo on #guix.

* gnu/services.scm (file-union): Add 'stat' call for SOURCE.
 2016-02-03 22:28:28 +01:00
Ludovic Courtès 240b57f0ca guix system: 'reconfigure' loads and starts new services. 
Partly fixes <http://bugs.gnu.org/22039>.

* gnu/services/herd.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu/services/shepherd.scm (shepherd-service-canonical-name): New
procedure.
(shepherd-service-file): Export.
* guix/scripts/system.scm (upgrade-shepherd-services): New procedure.
(switch-to-system): Use it.
* guix/ui.scm (info): New procedure.
* doc/guix.texi (Invoking guix system): Mention system services.
 2016-02-03 22:28:28 +01:00
Efraim Flashner 98416109d5 gnu: libdvdcss: Update to 1.4.0. 
* gnu/packages/video.scm (libdvdcss): Update to 1.4.0.
[source]: Change source url.
 2016-02-03 22:20:56 +02:00
Efraim Flashner 321a0299a7 gnu: youtube-dl: Update to 2016.02.01. 
* gnu/packages/video.scm (youtube-dl): Update to 2016.02.01.
 2016-02-03 22:20:56 +02:00
Efraim Flashner dabd7c9b68 gnu: enlightenment: Update to 0.20.5. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.5.
 2016-02-03 22:20:56 +02:00
Efraim Flashner e11e76b68e gnu: emotion-generic-players: Update to 1.17.0. 
* gnu/packages/enlightenment.scm (emotion-generic-players): Update to 1.17.0.
 2016-02-03 22:20:56 +02:00
Efraim Flashner da5e7616a0 gnu: evas-generic-loaders: Update to 1.17.0. 
* gnu/packages/enlightenment.scm (evas-generic-loaders): Update to 1.17.0.
 2016-02-03 22:20:56 +02:00
Efraim Flashner 58fc31670a gnu: elementary: Update to 1.17.0. 
* gnu/packages/enlightenment.scm (elementary): Update to 1.17.0.
 2016-02-03 22:20:56 +02:00
Efraim Flashner 7b2f2fbf08 gnu: efl: Update to 1.17.0. 
* gnu/package/enlightenment.scm (efl): Update to 1.17.0.
 2016-02-03 22:20:56 +02:00
Andreas Enge 37d6b0978c gnu: hwloc: Build without numactl support on armhf. 
* gnu/packages/mpi.scm (hwloc)[inputs]: Drop numactl on armhf, where the
  package is not available.
 2016-02-03 21:05:51 +01:00
Andreas Enge 35dfcdd753 gnu: numactl: Remove unsupported system armhf-linux. 
* gnu/packages/linux.scm (numactl)[supported-systems]: Remove armhf.
 2016-02-03 21:03:46 +01:00
Mark H Weaver d120b1d433 gnu: Remove linux-libre-4.2.5. 
This series is no longer supported upstream.

* gnu/packages/linux.scm (linux-libre-4.2.5): Remove variable.
 2016-02-03 14:26:57 -05:00
Andreas Enge 11b953a1b1 gnu: pius: Update to 2.2.2. 
* gnu/packages/gnupg.scm (pius): Update to 2.2.2.
 2016-02-03 15:49:07 +01:00