Commit Graph

23196 Commits (a099570249444af8369c1d06580a5cf687625984)

Author SHA1 Message Date
Dave Love a099570249
gnu: openmpi: Add RDMA and libfabric support.
* gnu/packages/mpi.scm (openmpi)[inputs]: Add rdma-core, libfabric.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:28 +02:00
Dave Love ae5947b0ef
gnu: Add libfabric.
* gnu/packages/linux.scm (libfabric): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:28 +02:00
Dave Love 3eb7c00038
gnu: libnl: Add "python2" and "python3" outputs.
* gnu/packages/linux.scm (libnl)[native-inputs]: Add SWIG and PKG-CONFIG.
[inputs]: Add PYTHON-2 and PYTHON-3.
[outputs]: Add python2, python3.
[arguments]: Add 'install-python' phase.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:27 +02:00
Dave Love d80a47f2f5
gnu: libnl: Add "doc" output.
* gnu/packages/linux.scm (libnl)[native-inputs]: Add doc origin.
[outputs]: New field.
[arguments]: Add 'install-doc' phase. New field.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:27 +02:00
Nicolas Goaziou d016b60fa3
gnu: wireshark: Update to 2.4.0.
* gnu/packages/networking.scm (wireshark): Update to 2.4.0.  Add "libssh",
  "libxml2", "qtbase" and "qttools" as inputs.  Remove unused "bison", "flex"
  and "gtk+" inputs.
2017-08-18 00:17:24 +02:00
Marius Bakke 9fa0c0e6fa
gnu: libmspack: Update to 0.6 [fixes CVE-2017-{6419,11423}].
* gnu/packages/compression.scm (libmspack): Update to 0.6.
2017-08-17 22:32:51 +02:00
Mark H Weaver 2d72ddf529
gnu: linux-libre: Update to 4.12.8.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.8.
(%linux-libre-hash): Update hash.
2017-08-17 14:41:18 -04:00
Mark H Weaver 1e070766c0
gnu: linux-libre@4.9: Update to 4.9.44.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.44.
2017-08-17 14:40:29 -04:00
Mark H Weaver 821f18719d
gnu: linux-libre@4.4: Update to 4.4.83.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.83.
2017-08-17 14:39:31 -04:00
Christopher Baines f2d7a492df
web: Check for the existance of SSL related files.
This adds back the previous behaviour of the nginx-service-type, where the
service would check at the time when the configuration is generated if the SSL
certificate and certificate key file exists.

* gnu/services/web.scm (emit-nginx-server-config): Add back check for SSL
  related files.
2017-08-17 18:32:27 +01:00
Andy Wingo c9aa261be4
gnu: services: Nginx configs can reference store
* gnu/services/web.scm (config-domain-strings, config-index-strings): Emit
lists instead of strings.
(emit-nginx-location-config, emit-nginx-server-config)
(emit-nginx-upstream-config): Rename from nginx-location-config,
default-nginx-server-config, and nginx-upstream-config.  Emit lists instead of
strings.
(flatten): New helper.
(default-nginx-config): Use flatten helper to write nginx conf.  This allows
location configs to reference store values.

Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-08-17 18:32:23 +01:00
Manolis Ragkousis e9a599cdce
gnu: Add OpenMW.
* gnu/packages/game-development.scm (openmw): New variable.
2017-08-17 19:40:33 +03:00
Manolis Ragkousis 42d0d13de8
gnu: Add mygui.
* gnu/packages/game-development.scm (mygui): New variable.
2017-08-17 19:35:28 +03:00
Manolis Ragkousis dd75a9a22c
gnu: Add ogre.
* gnu/packages/graphics.scm (ogre): New variable.
2017-08-17 19:11:35 +03:00
Ricardo Wurmus bf3fa99654
gnu: Add r-methylkit.
* gnu/packages/bioinformatics.scm (r-methylkit): New variable.
2017-08-17 18:00:17 +02:00
Ricardo Wurmus 8a39e4a553
gnu: sassc: Update to 3.4.5.
* gnu/packages/web.scm (sassc): Update to 3.4.5.
[arguments]: Add PREFIX to make-flags, disable tests, remove custom install
phase.
2017-08-17 18:00:17 +02:00
Alex Vong f30ff28b96
gnu: mariadb: Update to 10.1.26 [fixes CVE-2017-{3636,3641,3653}].
* gnu/packages/databases.scm (mariadb): Update to 10.1.26.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-08-17 11:40:29 -04:00
Ricardo Wurmus 05e8a3ef0f
gnu: Add r-ksamples.
* gnu/packages/cran.scm (r-ksamples): New variable.
2017-08-17 17:26:13 +02:00
Ricardo Wurmus abcb849405
gnu: Add r-suppdists.
* gnu/packages/cran.scm (r-suppdists): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus 8d22007380
gnu: Add r-energy.
* gnu/packages/cran.scm (r-energy): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus 6b4a9aec23
gnu: Add r-fitdistrplus.
* gnu/packages/cran.scm (r-fitdistrplus): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus 521e0703d8
gnu: Add r-limsolve.
* gnu/packages/cran.scm (r-limsolve): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus a3e36d3772
gnu: Add r-lpsolve.
* gnu/packages/cran.scm (r-lpsolve): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus 212f612040
gnu: Add r-qvalue.
* gnu/packages/bioinformatics.scm (r-qvalue): New variable.
2017-08-17 17:26:12 +02:00
Ricardo Wurmus d4a1e918cb
gnu: Add r-fastseg.
* gnu/packages/bioinformatics.scm (r-fastseg): New variable.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus b31e4a9693
gnu: Add r-emdbook.
* gnu/packages/cran.scm (r-emdbook): New variable.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus 97cb349dc1
gnu: r-trimcluster: Update license.
* gnu/packages/statistics.scm (r-trimcluster)[license]: Also specify GPLv3+.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus 8c72b83096
gnu: Add r-bbmle.
* gnu/packages/cran.scm (r-bbmle): New variable.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus d6b156dc04
gnu: Add r-inline.
* gnu/packages/cran.scm (r-inline): New variable.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus 062b6dbd25
gnu: Add r-lmtest.
* gnu/packages/cran.scm (r-lmtest): New variable.
2017-08-17 17:26:11 +02:00
Ricardo Wurmus 58db98c9f2
gnu: Add r-extremes.
* gnu/packages/cran.scm (r-extremes): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus 28476b4bc0
gnu: Add r-distillery.
* gnu/packages/cran.scm (r-distillery): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus 6427e62005
gnu: Add r-lmoments.
* gnu/packages/cran.scm (r-lmoments): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus e389d10f55
gnu: Add r-rmtstat.
* gnu/packages/cran.scm (r-rmtstat): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus b723dedf81
gnu: Add r-rook.
* gnu/packages/web.scm (r-rook): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus bc0081e76f
gnu: Add r-sp.
* gnu/packages/cran.scm (r-sp): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus 3349faecf5
gnu: Add r-proxy.
* gnu/packages/cran.scm (r-proxy): New variable.
2017-08-17 17:26:10 +02:00
Ricardo Wurmus ac8402072b
gnu: Add r-ggally.
* gnu/packages/cran.scm (r-ggally): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus c9c6f4b543
gnu: Add r-progress.
* gnu/packages/cran.scm (r-progress): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus 71be51d531
gnu: Add r-reshape.
* gnu/packages/cran.scm (r-reshape): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus 18a16ceb7c
gnu: Add r-prettyunits.
* gnu/packages/cran.scm (r-prettyunits): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus 49c9c29790
gnu: Add r-ffbase.
* gnu/packages/cran.scm (r-ffbase): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus a7f0faa204
gnu: Add r-ff.
* gnu/packages/cran.scm (r-ff): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus f2e974e1a2
gnu: Add r-fastmatch.
* gnu/packages/cran.scm (r-fastmatch): New variable.
2017-08-17 17:26:09 +02:00
Ricardo Wurmus e0268ff2e4
gnu: Add r-getoptlong.
* gnu/packages/cran.scm (r-getoptlong): New variable.
2017-08-17 17:26:08 +02:00
Ricardo Wurmus d3c67e1b45
gnu: Add r-dendextend.
* gnu/packages/cran.scm (r-dendextend): New variable.
2017-08-17 17:26:08 +02:00
Ricardo Wurmus 0548660420
gnu: Add r-compare.
* gnu/packages/cran.scm (r-compare): New variable.
2017-08-17 17:26:08 +02:00
Ricardo Wurmus eb60149eee
gnu: Add r-png.
* gnu/packages/image.scm (r-png): New variable.
2017-08-17 17:26:08 +02:00
Ricardo Wurmus 5cc79c9c50
gnu: Add r-powerlaw.
* gnu/packages/cran.scm (r-powerlaw): New variable.
2017-08-17 17:25:47 +02:00
Ricardo Wurmus 2856369fad
gnu: Add r-circlize.
* gnu/packages/cran.scm (r-circlize): New variable.
2017-08-17 17:25:47 +02:00