71f80f5487
gnu: Add python-libsvm.
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* gnu/packages/machine-learning.scm (python-libsvm): New variable.
2015-06-12 12:57:30 +02:00
741115b649
gnu: Add libsvm.
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* gnu/packages/machine-learning.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
2015-06-12 12:57:30 +02:00
e0a02cb21f
gnu: ngs-sdk: Update to version 1.1.1.
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* gnu/packages/bioinformatics.scm (ngs-sdk): Update to version 1.1.1.
2015-06-12 12:57:29 +02:00
48d21d6cd6
gnu: ghc: Patch runtime references to /bin/sh.
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* gnu/packages/haskell.scm (ghc)[arguments]: Rename
'unpack-and-fix-testsuite' phase to 'unpack-testsuite-and-fix-bins'.
Patch source files that reference /bin/sh.
2015-06-11 18:55:49 -05:00
6508ce55e9
build-system/haskell: install config for any package that creates it.
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A Cabal package is allowed to declare an "empty" library, in an
otherwise executable-only package, for the purpose of allowing Cabal
to use it as a dependency for other packages. See e.g. hspec-discover.
* guix/build/haskell-build-system.scm (register): Unconditionally call
setup script with "register", and install any config file generated.
2015-06-11 18:55:49 -05:00
b4b1fe9d2f
profiles: Process ghc conf files only once.
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A package may be listed in the manifest inputs multiple times. Avoid
copying ghc *.conf files twice by deleting duplicates.
* guix/profiles.scm (ghc-package-cache-file)[conf-files]: Delete
duplicate manifest inputs before copying conf files.
2015-06-11 18:55:48 -05:00
84de458ba8
profiles: Search for ghc conf files only if package db exists.
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This avoids having 'find-files' report warnings about searching in
non-existent directories.
* guix/profiles.scm (ghc-package-cache-file)[conf-files]: Only search
for *.conf files if the search directory exists.
2015-06-11 18:55:48 -05:00
dc7b1817f6
Revert "gnu: openssl: Update to 1.0.2b."
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This reverts commit 4f467e33de
2015-06-12 01:46:03 -04:00
4f467e33de
gnu: openssl: Update to 1.0.2b.
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* gnu/packages/openssl.scm (openssl): Update to 1.0.2b.
2015-06-12 01:25:23 -04:00
6c35641453
tests: Avoid sequence of zero expressions.
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* tests/records.scm ("define-record-type* with let* behavior"): Add missing
body for clause.
2015-06-11 23:33:32 +02:00
ad7c1a2cde
records: Remove unnecessary 'begin'.
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* guix/records.scm (define-record-type*): Remove unnecessary 'begin'.
2015-06-11 23:33:32 +02:00
79477def6b
tests: Write the random seed to the error port.
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* guix/tests.scm (random-seed): New procedure.
(%seed): Use it, and write the random seed to the error port.
2015-06-11 23:33:32 +02:00
e21adc768e
gnu: guix: Update snapshot.
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* gnu/packages/package-management.scm (guix-devel): Update to a43b55f
2015-06-11 23:33:32 +02:00
0004c5904c
packages: Make 'location' field innate.
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* guix/packages.scm (<package>)[location]: Add 'innate' property.
* guix/build-system/gnu.scm (static-package): Remove 'loc' parameter and
'location' field.
* gnu/packages/autotools.scm (autoconf-wrapper): Remove 'location' field.
* gnu/packages/commencement.scm (gnu-make-boot0, diffutils-boot0, gcc-final):
Likewise.
* gnu/packages/cross-base.scm (cross): Likewise.
* gnu/packages/emacs.scm (emacs-no-x, emacs-no-x-toolkit): Likewise.
* gnu/packages/make-bootstrap.scm (tarball-package): Likewise.
* gnu/packages/maths.scm (petsc-complex): Likewise.
2015-06-11 23:33:32 +02:00
8a16d064fa
records: Add support for 'innate' fields.
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* guix/records.scm (make-syntactic-constructor): Add #:innate parameter.
[record-inheritance]: Honor it.
[innate-field?]: New procedure.
(define-record-type*)[innate-field?]: New procedure.
Pass #:innate to 'make-syntactic-constructor'.
* tests/records.scm ("define-record-type* & inherit & innate",
"define-record-type* & thunked & innate"): New tests.
2015-06-11 23:33:32 +02:00
792798f486
records: "options" → "properties".
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* guix/records.scm (define-record-type*): Change "options" to "properties".
2015-06-11 23:33:32 +02:00
faef3b6a96
records: Factorize field property predicates.
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* guix/records.scm (define-field-property-predicate): New macro.
(define-record-type*)[thunked-field?, delayed-field?]: Use it.
2015-06-11 23:33:32 +02:00
b9c8647337
records: Separate default-value handling.
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* guix/records.scm (make-syntactic-constructor)[default-values]: New
variable.
[field-default-value]: New procedure.
Use them.
2015-06-11 23:33:32 +02:00
39fc041a7d
records: Replace 'eval-when' with a proper 'define-syntax'.
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* guix/records.scm (make-syntactic-constructor): Remove enclosing
'eval-when'. Turn into a 'syntax-rules' macro.
2015-06-11 23:33:32 +02:00
b45ce07a8a
gnu: gnupg: Update to 2.1.5.
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* gnu/packages/gnupg.scm (gnupg): Update to 2.1.5.
2015-06-11 14:39:22 -04:00
4510b2da3e
gnu: Add librest.
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* gnu/packages/gnome.scm (librest): New variable.
2015-06-11 23:30:54 +08:00
8b1c8e4e27
gnu: inetutils: Update to 1.9.4.
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* gnu/packages/admin.scm (inetutils): Update to 1.9.4.
2015-06-11 10:08:01 -04:00
a43b55f1a6
guix build: Allow directories to be passed to --with-source.
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* guix/scripts/build.scm (package-with-source)[tarball-base-name]: Gracefully
handle file names that lack an extension.
Pass #:recursive? #t to 'download-to-store'.
* guix/download.scm (download-to-store): Add #:recursive? parameter and pass
it to 'add-to-store'.
* doc/guix.texi (Invoking guix build): Add an example of --with-source with a
directory.
2015-06-11 11:19:12 +02:00
c2590362ad
environment: Connect to the store after the command line has been parsed.
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* guix/scripts/environment.scm (guix-environment): Call 'parse-command-line'
outside of 'with-store'. This allows things like --help to run even if the
daemon is not running.
2015-06-11 11:09:12 +02:00
1492801655
Merge branch 'master' into core-updates
2015-06-10 17:50:27 -04:00
1511e02355
gnu: nettle: Update to 3.1.1.
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* gnu/packages/nettle.scm (nettle): Update to 3.1.1.
2015-06-10 17:49:11 -04:00
70ca2e94d1
gnu: which: Update to 2.21.
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* gnu/packages/base.scm (which): Update to 2.21.
2015-06-10 17:39:08 -04:00
2a1552c608
gnu: cross-base: Do not strip cross-gcc.
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Fixes a regression introduced in 9063ef0http://hydra.gnu.org/build/492479/nixlog/1/tail-reload >.)
* gnu/packages/cross-base.scm (cross-gcc-arguments): Add #:strip-binaries? #f
unconditionally. Replace 'install' phase to use "make install-strip".
2015-06-10 23:19:30 +02:00
57cd353d87
build: Build man pages after the corresponding code.
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* doc.am (doc/guix.1): Remove extraneous $(top_builddir)/.
(doc/guix-daemon.1): Fix dependency.
(doc/guix-$(1).1): Remove extraneous $(top_builddir)/. Depend on the .go
files instead of the .scm file. Add dependency on scripts/guix.
2015-06-10 21:58:16 +02:00
7887bcbf56
daemon: Internationalize guix-daemon.
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* nix/nix-daemon/guix-daemon.cc (n_, _): New macros.
(guix_textdomain): New variable.
(doc): Use 'n_'.
(options): Likewise, and lowercase messages.
(argp): Add initializer for 'argp_domain' field.
(parse_opt): Use '_' for messages.
(main): Likewise, and add calls to 'setlocale', 'bindtextdomain', and
'textdomain'.
* daemon.am (guix_daemon_CPPFLAGS): Add -DLOCALEDIR.
* po/guix/Makevars (XGETTEXT_OPTIONS): Remove '--language' option. Add
'--keyword=n_'.
* po/guix/POTFILES.in: Add guix-daemon.cc.
2015-06-10 21:58:16 +02:00
3dbb0e5f8b
gnu: qemu: Add fix for CVE-2015-3209.
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* gnu/packages/patches/qemu-CVE-2015-3209.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu): Add patch.
2015-06-10 15:42:16 -04:00
e51943f886
gnu: cups: Update to 2.0.3.
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* gnu/packages/cups.scm (cups): Update to 2.0.3.
2015-06-10 14:50:28 -04:00
63398a25ba
gnu: linux-libre: Update to 4.0.5.
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* gnu/packages/linux.scm (linux-libre): Update to 4.0.5.
2015-06-10 11:37:37 -04:00
8ac0368e5b
guix-register: Use C++11 range 'for' loop instead of 'foreach' macro.
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* nix/guix-register/guix-register.cc (register_validity): Use C++11 range
'for' loop instead of 'foreach'.
2015-06-10 13:55:23 +02:00
369755847b
guix-register: Perform deduplication even when --prefix is passed.
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Fixes <http://bugs.gnu.org/19044 >.
* nix/guix-register/guix-register.cc (register_validity): Change the (optimize
&& prefix.empty ()) condition to just (optimize). Change settings.nixStore
around the loop. Prepend PREFIX to the argument passed to 'optimisePath'.
* tests/guix-register.sh: Use 'guix-register -p' with duplicate files, and
make sure they are deduplicated on the target. Adjust existing tests.
2015-06-10 13:47:58 +02:00
4ae1fe14b9
tests: Make the daemon socket explicit in guix-register test.
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* tests/guix-register.sh: Define GUIX_DAEMON_SOCKET. Pass it explicitly to
'open-connection'.
2015-06-10 11:11:52 +02:00
78acff7c11
guix system: init: Overwrite the items in the target store.
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Fixes <http://bugs.gnu.org/20722 >.
Reported by Eric Bavier <ericbavier@openmailbox.org>.
* guix/scripts/system.scm (copy-item): Check whether DEST exists and remove it
if it does.
2015-06-10 10:31:47 +02:00
aea9b23213
install: Really overwrite TARGET/var/guix/profiles/system-1-link.
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* gnu/build/install.scm (populate-root-file-system): Delete system-1-link
under TARGET, not under /. Use 'catch' and check for EEXIST instead of
(false-if-exception (delete-file ...)).
2015-06-10 10:31:25 +02:00
7522a0160b
ui: Replace the global 'symlink' binding.
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* guix/ui.scm (symlink): Set! the global symlink.
2015-06-10 10:25:16 +02:00
80cd1d8992
doc: Add 'help2man' to HACKING.
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* HACKING: Mention 'help2man'.
2015-06-10 10:03:19 +02:00
ab999c2516
gnu: commencement: Remove "debug" output of GCC-FINAL.
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Fixes a regression introduced in 9063ef0
2015-06-10 09:37:36 +02:00
d0b62698c9
gnu: gcc: Build libbacktrace without -Werror.
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* gnu/packages/gcc.scm (gcc-4.7)[arguments] <pre-configure>: Remove -Werror
from libbacktrace/configure.
2015-06-09 22:32:15 +02:00
9063ef0f79
gnu: gcc: Add "debug" output, debugging symbols of libraries.
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* gnu/packages/gcc.scm (gcc-4.7)[install-target]: Remove.
[outputs]: Add "debug".
[arguments]: Remove #:strip-binaries?. Remove 'install' phase.
2015-06-09 22:32:15 +02:00
811974925d
gnu: gcc: Do not add -rpath=LIBDIR/lib64 to the "lib" spec.
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* gnu/packages/gcc.scm (gcc-4.7): Remove unneeded LIBDIR/lib64 from
GNU_USER_TARGET_LIB_SPEC.
2015-06-09 22:32:15 +02:00
e58652502b
gnu: make-bootstrap: Adjust gawk patch to 4.1.3.
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* gnu/packages/patches/gawk-shell.patch: Update for gawk 4.1.3.
2015-06-09 22:32:15 +02:00
30347caae7
gnu: guile-static: Use Linux syscalls only on Linux-based systems.
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* gnu/packages/patches/guile-linux-syscalls.patch: Use Linux
syscalls only on Linux-based systems.
2015-06-09 22:48:10 +03:00
329d13b8ea
gnu: mysql: Update to 5.6.25.
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* gnu/packages/databases.scm (mysql): Update to 5.6.25.
[source]: Use 'version-major+minor'.
[build-system]: Change to cmake-build-system. Adjust arguments
accordingly.
[inputs]: Add libaio. Remove procps. Move perl to 'native-inputs'.
2015-06-09 18:16:14 +08:00
a415474873
import: hackage: Refactor parsing code and add new options.
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* guix/import/cabal.scm: New file.
* guix/import/hackage.scm: Update to use the new Cabal parsing module.
* tests/hackage.scm: Update tests.
* guix/scripts/import/hackage.scm: Add new '--cabal-environment' and '--stdin'
options.
* doc/guix.texi: ... and document them.
* Makefile.am (MODULES): Add 'guix/import/cabal.scm',
'guix/import/hackage.scm' and 'guix/scripts/import/hackage.scm'.
(SCM_TESTS): Add 'tests/hackage.scm'.
2015-06-09 09:48:38 +02:00
0705f79c6f
gnu: Add proof-general.
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* gnu/packages/ocaml.scm (proof-general): New variable.
2015-06-08 20:08:50 -04:00
5dc42964a7
doc: Suggest unpacking the binary tarball in /tmp.
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Suggested by Thomas Schwinge <thomas@codesourcery.com> and others.
* doc/guix.texi (Binary Installation): Suggest unpacking in /tmp rather than /.
2015-06-08 23:31:02 +02:00
Ricardo Wurmus