Hartmut Goebel
1ad15c1669
gnu: Rename Java packages to match new naming specification.
...
* gnu/packages/bioinformatics.scm (htsjdk): Rename to...
(java-htsjdk): ...this.
(ngs-java): Rename to...
(java-ngs): ...this.
(ncbi-vdb)[arguments,inputs]: Use new name.
* gnu/packages/java.scm (swt): Rename to...
(java-swt): ...this.
* gnu/packages/music.scm (tuxguitar)[make-flags,inputs,arguments]: Use
new name of package "swt".
2016-04-19 16:55:03 +02:00
Hartmut Goebel
e1c963bf0d
doc: Add specification for Java packages
...
* doc/guix.texi (Java Packages): New subsection.
2016-04-19 16:55:03 +02:00
Ricardo Wurmus
4d16cc5133
gnu: python2-plastid: Propagate setuptools.
...
* gnu/packages/bioinformatics.scm (python2-plastid)[native-inputs]: Move
python2-setuptools from here...
[propagated-inputs]: ...to here.
2016-04-19 16:12:51 +02:00
Ricardo Wurmus
8694dca8f3
gnu: r: Update to 3.2.5.
...
* gnu/packages/statistics.scm (r): Update to 3.2.5.
2016-04-19 14:44:29 +02:00
Ricardo Wurmus
349a314765
gnu: Add icedtea-8.
...
* gnu/packages/java.scm (icedtea-8): New variable.
2016-04-19 14:44:29 +02:00
宋文武
a4e885f626
glib: Fix tests.
...
* gnu/packages/glib.scm (glib)[arguments]: Disable the "/application/local-actions"
test in 'disable-failing-tests' phase.
2016-04-19 20:02:44 +08:00
Ludovic Courtès
31b6cdf8d1
doc: Mention 'mkswap' during installation.
...
Reported by Thierry Micoud <thierrymicoud@gmail.com>.
* doc/guix.texi (Preparing for Installation): Mention 'mkswap'.
2016-04-19 12:40:11 +02:00
Ricardo Wurmus
f94bf1983b
gnu: Add python-plastid.
...
* gnu/packages/bioinformatics.scm (python-plastid, python2-plastid): New
variables.
2016-04-19 12:16:01 +02:00
Ricardo Wurmus
4db9433aa0
gnu: Add python-twobitreader.
...
* gnu/packages/bioinformatics.scm (python-twobitreader,
python2-twobitreader): New variables.
2016-04-19 12:16:01 +02:00
Danny Milosavljevic
3fd4b90d1d
gnu: Add cabextract.
...
* gnu/packages/compression.scm (cabextract): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 16:02:53 -04:00
Kei Yamashita
c21a256272
gnu: Add dillo.
...
* gnu/packages/dillo.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 15:45:41 -04:00
Kei Yamashita
cf1b55bd32
gnu: fltk: Add Xft support.
...
* gnu/packages/fltk.scm (fltk)[inputs]: Add libxft.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-18 15:39:34 -04:00
Mark H Weaver
4f8cede062
syscalls: If a syscall is not available, defer the error.
...
* guix/build/syscalls.scm (syscall->procedure): New procedure.
(mount, umount, swapon, swapoff, clone, pivot-root): Use it.
(clone): Add case for nonexistent syscall id.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-04-18 19:36:31 +02:00
Ludovic Courtès
dd1d09f7e4
utils: 'cache-directory' gracefully deals with unset 'HOME'.
...
Fixes <http://bugs.gnu.org/23165 >.
* guix/utils.scm (cache-directory): Use 'getpwuid' when 'HOME' is unset.
2016-04-18 19:26:34 +02:00
Ludovic Courtès
cd76fbde6f
gnu: vlc: Make 'plugins.dat' generation reproducible.
...
Fixes <http://bugs.gnu.org/23307 >.
* gnu/packages/video.scm (vlc)[arguments]: Add #:phases.
2016-04-18 15:39:43 +02:00
Ludovic Courtès
4ef2721b52
gnu: vlc: Do not capture the build time.
...
* gnu/packages/video.scm (vlc)[source]: Add 'snippet'.
2016-04-18 12:08:31 +02:00
Ludovic Courtès
b4dff93550
gnu: vlc: Build against ffmpeg 2.8.
...
Fixes <http://bugs.gnu.org/23256 >.
Reported by Christopher Allan Webber <cwebber@dustycloud.org>.
* gnu/packages/video.scm (vlc): Use FFMPEG-2.8 instead of FFMPEG.
2016-04-18 11:58:15 +02:00
Ludovic Courtès
940778c71c
gnu: ffmpeg: Re-add 2.8.6.
...
* gnu/packages/video.scm (ffmpeg-2.8): New variable.
2016-04-18 11:26:30 +02:00
Alex Kost
a7c61781df
emacs: Display license info on button press in Package Info buffer.
...
* emacs/guix-ui-package.el (guix-package-license): Adjust button action
to display license info instead of browsing license URL.
2016-04-18 10:09:02 +03:00
Alex Kost
690c055b08
emacs: Add location "Packages" button to Package Info buffer.
...
* emacs/guix-ui-package.el (guix-package-info-insert-location): New
procedure.
(guix-package-info-format): Use it.
(guix-output-info-format): Likewise.
2016-04-18 10:09:02 +03:00
Alex Kost
b4b9975d4a
emacs: Add interface for package locations.
...
* emacs/guix-main.scm (%package-location-param-alist): New variable.
(package-location->sexp, package-location-entries): New procedures.
* emacs/guix-ui-location.el: New file.
* emacs.am (ELFILES): Add it.
* doc/emacs.texi (Emacs Package Locations): Document 'guix-locations'.
* NEWS: Mention it.
2016-04-18 10:09:02 +03:00
Alex Kost
b5e3cbbb24
doc: emacs: Add "Package Source Locations" section.
...
* doc/emacs.texi (Emacs Commands): Move description of 'guix-edit'
command to...
(Emacs Package Locations): ... here. Document 'guix-find-location'.
New node.
* doc/guix.texi (Top): Add it.
2016-04-18 10:09:02 +03:00
Alex Kost
e81a89d176
emacs: Make 'guix-find-location' interactive.
...
* emacs/guix-location.el (guix-find-location): Make interactive. Adjust
to handle "reduced" locations (without line and column numbers).
2016-04-18 10:09:02 +03:00
Alex Kost
8934c3b60f
emacs: Display message if license not found.
...
* emacs/guix-ui-license.el (guix-license-message): New procedure.
(guix-license-info-message-function): Use it.
(guix-license-list-message-function): Likewise.
2016-04-18 10:09:02 +03:00
Alex Kost
27986d7b19
emacs: Separate package license code.
...
Move list/info interface code from "guix-license.el" to
"guix-ui-license.el".
* emacs/guix-license.el (guix-license-get-entries, guix-license-get-display)
(guix-license-insert-packages-button, guix-license-insert-comment)
(guix-licenses): Move to...
* emacs/guix-ui-license.el: ... here. New file.
* emacs.am (ELFILES): Add it.
2016-04-18 10:09:02 +03:00
Alex Kost
79c7a8f214
emacs: Separate package location code.
...
* emacs/guix-base.el (guix-directory, guix-read-directory)
(guix-set-directory): Move to "guix-backend.el".
(guix-find-location, guix-package-location, guix-edit): Move to...
* emacs/guix-location.el: ... here. New file.
* emacs/guix-ui-package.el: Use it.
* emacs.am (ELFILES): Add it.
2016-04-18 10:09:02 +03:00
Alex Kost
b4ea535a9f
emacs: Add 'guix-packages-by-location' command.
...
* emacs/guix-main.scm (packages-by-location-file, package-location-files):
New procedures.
(%patterns-makers): Add 'location' search type.
* emacs/guix-messages.el (guix-message-packages-by-location): New procedure.
(guix-messages): Use it.
* emacs/guix-read.el (guix-package-locations)
(guix-read-package-location): New procedures.
* emacs/guix-ui-package.el (guix-packages-by-location): New command.
* doc/emacs.texi (Emacs Commands): Document it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-04-18 10:09:01 +03:00
Ben Woodcroft
9bb46c155b
gnu: ruby-bio-commandeer: Update to 0.1.3.
...
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.1.3.
2016-04-18 14:58:43 +10:00
Ludovic Courtès
ffba7d498d
mapped-devices: LUKS partitions can be designated by their UUID.
...
* gnu/system/mapped-devices.scm (device-mapping-service-type): Add
'modules' and 'imported-modules' fields to 'shepherd-service'.
(open-luks-device): Use 'find-partition-by-luks-uuid' to lookup the
partition when SOURCE is a bytevector.
* gnu/system/linux-initrd.scm (base-initrd): Augment 'use-modules'
form.
* doc/guix.texi (Mapped Devices): Give example with a UUID.
2016-04-18 01:24:06 +02:00
Ludovic Courtès
4da8c19e83
mapped-devices: 'mapped-device-service' takes a <mapped-device>.
...
* gnu/system/mapped-devices.scm (device-mapping-service): Take a
<mapped-device> instead of 3 parameters.
(device-mapping-service-type): Adjust accordingly.
* gnu/system.scm (device-mapping-services): Adjust accordingly.
2016-04-18 01:24:06 +02:00
Ludovic Courtès
1ea507bce2
services: Move 'device-mapping-service' to (gnu system mapped-devices).
...
* gnu/services/base.scm (device-mapping-service-type)
(device-mapping-service): Move to...
* gnu/system/mapped-devices.scm (device-mapping-service-type):
(device-mapping-service): ... here. New variables.
2016-04-18 01:24:06 +02:00
Ludovic Courtès
374f14c265
system: Move 'luks-device-mapping' to (gnu system mapped-devices).
...
* gnu/system.scm (open-luks-device, close-luks-device)
(luks-device-mapping): Move to...
* gnu/system/mapped-devices.scm: ... here. New file.
2016-04-18 01:24:06 +02:00
Ludovic Courtès
060d62a740
system: Add (gnu system mapped-devices).
...
* gnu/system/file-systems.scm (<mapped-device>, <mapped-device-type>):
Move to...
* gnu/system/mapped-devices.scm: ... here. New file.
* gnu/system.scm, gnu/services/base.scm,
gnu/system/linux-initrd.scm: Use it.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu.scm (%public-modules): Add it.
2016-04-18 01:24:06 +02:00
Ricardo Wurmus
fac34dfe2a
gnu: Add python-pyusb.
...
* gnu/packages/libusb.scm (python-pyusb, python2-pyusb): New variables.
2016-04-17 21:48:51 +02:00
Leo Famulari
d99f6ffb4c
gnu: khard: Update to 0.9.0.
...
* gnu/packages/mail.scm (khard): Update to 0.9.0.
2016-04-17 14:35:11 -04:00
Leo Famulari
9bed9b150d
gnu: python-vobject: Update to 0.9.2.
...
* gnu/packages/python.scm (python-vobject, python2-vobject): Update to 0.9.2.
2016-04-17 14:35:11 -04:00
Leo Famulari
67157996e2
gnu: openssh: Fix CVE-2015-8325.
...
* gnu/packages/patches/openssh-CVE-2015-8325.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh): Use it.
2016-04-17 13:48:31 -04:00
Ludovic Courtès
a7d94b54c7
gnu: Add recordmydesktop.
...
* gnu/packages/video.scm (recordmydesktop): New variable.
2016-04-17 17:37:20 +02:00
Ludovic Courtès
c82c060d91
install: Use 'beta' instead of 'alpha'.
...
Suggested by Jelle Licht <jlicht@fsfe.org>.
* gnu/system/install.scm (installation-services): Say 'beta' instead of
'alpha' and make the warning less scary.
2016-04-17 17:37:20 +02:00
Ricardo Wurmus
534db46306
gnu: python-pandas: Fix test failures.
...
* gnu/packages/patches/python-pandas-fix-tslib-test-failure.patch: New
file.
* gnu-system.am (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-pandas)[source]: Add patch.
2016-04-17 11:36:25 +02:00
Ricardo Wurmus
b711df02fd
gnu: icedtea-7: Update to 2.6.5.
...
* gnu/packages/java.scm (icedtea-7): Update to 2.6.5.
[inputs]: Add libxcomposite.
2016-04-17 11:15:53 +02:00
Alex Kost
b3d05f4870
services: 'console-keymap-service' takes multiple files.
...
* gnu/services/base.scm (console-keymap-service-type): Type procedure
takes a list of files instead of a single file.
(console-keymap-service): Take 'files' as rest arguments.
* doc/guix.texi (Base Services): Improve documentation of
'console-keymap-service'.
2016-04-17 10:33:08 +03:00
Alex Kost
a78daf5e2b
gnu: kbd: Update to 2.0.3.
...
* gnu/packages/linux.scm (kbd): Update to 2.0.3.
2016-04-17 10:33:08 +03:00
Alex Kost
5953d2b7c0
gnu: kbd: Use 'modify-phases'.
...
* gnu/packages/linux.scm (kbd)[arguments]: Use 'modify-phases'.
2016-04-17 10:33:08 +03:00
Ludovic Courtès
a1ccefaa12
file-systems: Add 'find-partition-by-luks-uuid'.
...
* gnu/build/file-systems.scm (%luks-endianness, %luks-header-size): New
macros.
(%luks-magic): New variable.
(sub-bytevector, read-luks-header, luks-header-uuid): New procedures.
(partition-predicate): Add 'read' parameter; wrap it with 'ENOENT-safe'.
Use it instead of 'read-ext2-superblock*'.
(read-ext2-superblock*): Remove.
(partition-label-predicate, partition-uuid-predicate): Pass
'read-ext2-superblock' as the first argument.
(partition-luks-uuid-predicate): New variable.
(find-partition-by-luks-uuid): New procedure.
2016-04-17 01:23:52 +02:00
Ludovic Courtès
2447335625
file-systems: Separate ENOENT catching from ext2 superblock reads.
...
* gnu/build/file-systems.scm (ENOENT-safe): New procedure.
(read-ext2-superblock*): Rewrite in terms of it.
2016-04-17 01:23:52 +02:00
Ludovic Courtès
e9dffec126
doc: Update 'skeletons' field documentation.
...
* doc/guix.texi (operating-system Reference): Update documentation of
'skeletons' as a followup to e79467f63a
.
2016-04-17 01:23:52 +02:00
Ludovic Courtès
d5e5924835
doc: Use new PACKAGE@VERSION syntax in example.
...
* doc/guix.texi (Using the Configuration System): Use PACKAGE@VERSION
syntax.
2016-04-17 01:23:52 +02:00
John Darrington
f6c8cb996b
gnu: Add marst.
...
* gnu/packages/marst.scm: New file.
* gnu-system.am: Add it.
2016-04-16 18:46:17 +02:00
Manolis Ragkousis
503275e94a
gnu: linux: Add case for arm64.
...
* gnu/packages/linux.scm (system->linux-architecture): Add
"aarch64".
2016-04-16 18:10:36 +03:00