nixo
/
guix-devel
1
0
Fork 0
Code Issues Pull Requests Releases Wiki Activity
10,384 Commits 1 Branch 0 Tags 104 MiB
Commit Graph

423 Commits

Author SHA1 Message Date
Ricardo Wurmus 229ad120d4 gnu: Add python-setuptools-scm. 
* gnu/packages/python.scm (python-setuptools-scm,
  python2-setuptools-scm): New variables.
 2015-10-12 16:08:18 +02:00
Ricardo Wurmus cb6d5c5468 gnu: Add python-pexpect. 
* gnu/packages/python.scm (python-pexpect, python2-pexpect): New
  variables.
 2015-10-12 16:08:18 +02:00
Cyril Roelandt 7787ef76b6 gnu: Update python-fixtures 
* gnu/packages/python.scm (python-fixtures): Update.
* gnu/packages/python.scm (python-fixtures-0.3.16,
  python2-fixtures-0.3.16, python-pbr-0.11,
  python2-pbr-0.11): New variables.
* gnu/packages/python.scm (python-testrepository): Use python-fxitures-0.3.16
  instead of python-fixtures in the inputs.
 2015-10-10 03:20:49 +02:00
Cyril Roelandt 643725a155 gnu: Add python-pip. 
* gnu/packages/python.scm (python-pip, python2-pip): New variables.
 2015-10-10 03:20:44 +02:00
Ludovic Courtès 9765b3aeac Revert "gnu: python: Do not retain references to build tools." 
This reverts commit 14f8dae6b1, which
was unintentionally pushed (it does not work with Python 3.)
 2015-10-08 18:08:16 +02:00
Mark H Weaver b81378251c Merge branch 'master' into core-updates 2015-10-08 10:59:39 -04:00
Ricardo Wurmus 797e1401fe gnu: python-h5py: Fix path to hdf5 library. 
* gnu/packages/python.scm (python-h5py)[arguments]: Add "fix-hdf5-paths"
  phase.
 2015-10-08 14:39:11 +02:00
Ricardo Wurmus 3c4010b1e9 gnu: python-h5py, python2-h5py: Correct inputs. 
* gnu/packages/python.scm (python-h5py)
  [inputs]: Remove python-cython and python-numpy.
  [propagated-inputs]: New field.
  [native-inputs]: Drop python-setuptools and add python-cython.
  (python2-h5py): Replace "inputs" with "propagated-inputs".
 2015-10-08 14:39:11 +02:00
Ricardo Wurmus 1285119bde gnu: Add python-joblib. 
* gnu/packages/python.scm (python-joblib, python2-joblib): New
  variables.
 2015-10-08 14:39:11 +02:00
Mark H Weaver 319fe79dd0 Merge branch 'master' into core-updates 2015-10-07 23:55:17 -04:00
Ludovic Courtès 6a20289d5a gnu: python: Simplify list of configure flags. 
* gnu/packages/patches/python-2.7-search-paths.patch,
  gnu/packages/patches/python-3-search-paths.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/python.scm (python-2)[source]: Use first patch.
  [arguments]: Remove now unneeded CPPFLAGS and LDFLAGS.
  (python)[source]: Use second patch.
  (python-minimal)[arguments]: Remove CPPFLAGS and LDFLAGS.
 2015-10-08 00:05:34 +02:00
Ludovic Courtès afa181fff4 gnu: python: Build the tkinter module. 
Fixes <http://bugs.gnu.org/20889>.
Reported by Federico Beffa <beffa@ieee.org>.

* gnu/packages/python.scm (python-2)[arguments]: Pass
  --with-tcltk-includes and --with-tcltk-libs.
  [inputs]: Add TCL and TK.
 2015-10-07 23:25:25 +02:00
Ludovic Courtès 95288fcc6c gnu: python: Add "minimal" variants. 
* gnu/packages/python.scm (python2-minimal, python-minimal): New
  variables.
  (wrap-python3): New procedure.
  (python-wrapper): Use it.
  (python-minimal-wrapper): New variable.
* gnu/packages/xml.scm (libxslt)[native-inputs]: Use
  PYTHON-MINIMAL-WRAPPER instead of PYTHON-WRAPPER.
* gnu/packages/xorg.scm (xcb-proto, libxcb, xorg-server): Likewise.
 2015-10-07 23:25:22 +02:00
Ludovic Courtès 0d56e3e1bc gnu: python-wrapper: Improve synopsis and description. 
* gnu/packages/python.scm (python-wrapper): Add 'synopsis' field; provide
  literal 'description' value.
 2015-10-07 11:53:01 +02:00
Ludovic Courtès 14f8dae6b1 gnu: python: Do not retain references to build tools. 
* gnu/packages/python.scm (python-2)[arguments]: Add
  'do-not-record-configure-flags' and
  'do-not-record-configure-flags-in-makefile' phases.
 2015-10-07 11:30:41 +02:00
Ludovic Courtès afd3d9316c Use "normalized codesets" everywhere. 
In other words, change "xx_YY.UTF-8" to "xx_YY.utf8".

* guix/profiles.scm (ca-certificate-bundle): Use "en_US.utf8" instead of
  "en_US.UTF-8".
* guix/packages.scm (patch-and-repack): Likewise.
* guix/build/gnu-build-system.scm (install-locale): Likewise.
* guix/build-system/gnu.scm (gnu-build, gnu-cross-build): Likewise.
* gnu/packages/python.scm (python-ipython): Likewise.
* gnu/packages/gawk.scm (gawk): Likewise.
* build-aux/hydra/demo-os.scm: Likewise.
* gnu/packages/guile.scm (guile-ncurses)[arguments]: Remove
  'change-locale' phase.
 2015-10-04 00:10:03 +02:00
Ben Woodcroft 02a8a1876a gnu: Add python-xlrd. 
* gnu/packages/python.scm (python-xlrd, python2-xlrd): New variables.

Signed-off-by: Mathieu Lirzin <mthl@openmailbox.org>
 2015-10-01 23:45:32 +02:00
Ludovic Courtès e1556533d3 Merge branch 'core-updates' 2015-09-26 15:14:53 +02:00
Ricardo Wurmus 5af999b898 gnu: Add pyOpenSSL. 
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): New
  variables.
 2015-09-25 21:44:30 +02:00
Ricardo Wurmus 88b47cb0e0 gnu: Add python-cryptography. 
* gnu/packages/python.scm (python-cryptography, python2-cryptography):
  New variables.
 2015-09-25 21:44:29 +02:00
Ricardo Wurmus aa759a5139 gnu: Add python-cryptography-vectors. 
* gnu/packages/python.scm (python-cryptography-vectors,
  python2-cryptography-vectors): New variables.
 2015-09-25 21:44:29 +02:00
Ricardo Wurmus 36ebf97283 gnu: Add python-pretend. 
* gnu/packages/python.scm (python-pretend, python2-pretend): New
  variables.
 2015-09-25 21:44:29 +02:00
Ricardo Wurmus 3f00e07866 gnu: Add python-idna. 
* gnu/packages/python.scm (python-idna, python2-idna): New variables.
 2015-09-25 21:44:29 +02:00
Ricardo Wurmus 9a49a5351c gnu: Add python-ipaddress. 
* gnu/packages/python.scm (python2-ipaddress): New variable.
 2015-09-25 21:44:29 +02:00
Ludovic Courtès 1007b6bf0b Merge branch 'master' into core-updates 2015-09-24 22:18:07 +02:00
Ricardo Wurmus 7a8ac75a94 gnu: Add python-pyasn1. 
* gnu/packages/python.scm (python-pyasn1, python2-pyasn1): New
  variables.
 2015-09-24 20:08:25 +02:00
Ricardo Wurmus 4179f952bf gnu: python-cffi: Update to 1.2.1. 
* gnu/packages/python.scm (python-cffi): Update to 1.2.1.
  [native-inputs]: Add python-pytest.
  [arguments]: Enable tests.
 2015-09-24 20:07:41 +02:00
Mark H Weaver bd90127ad4 Merge branch 'master' into core-updates 2015-09-22 16:38:48 -04:00
Ricardo Wurmus 667d90dfee gnu: python2-ipython: Override terminado in propagated inputs. 
* gnu/packages/python.scm (python2-ipython)[inputs, propagated-inputs]:
  Override inherited "python-terminado" in propagated inputs instead of
  regular inputs.
 2015-09-21 16:27:23 +02:00
Cyril Roelandt d7af106987 gnu: Add python2-keyring. 
* gnu/packages/python.scm (python2-keyring): New variable.
 2015-09-20 04:42:15 +02:00
Cyril Roelandt 7261d9eb16 gnu: Add python2-pyflakes and fix python2-pyflakes-0.8.1. 
* gnu/packages/python.scm (python2-pyflakes): New variable.
* gnu/packages/python.scm (python2-pyflakes-0.8.1): Fix the definition.
 2015-09-20 04:41:51 +02:00
Cyril Roelandt 350ba0a32b gnu: Add python-prettytable 
* gnu/packages/python.scm (python-prettytable,
  python2-prettytable): New variables.
 2015-09-20 04:29:10 +02:00
Cyril Roelandt de34aface7 gnu: Add python-webob. 
* gnu/packages/python.scm (python-webob, python2-webob): New variables.
 2015-09-16 22:53:36 +02:00
Cyril Roelandt 5e412b6383 gnu: Add python-monotonic. 
* gnu/packages/python.scm (python-monotonic, python2-monotonic): New variables.
 2015-09-14 00:14:56 +02:00
Cyril Roelandt b85c85becd gnu: Add python-iso8601. 
* gnu/packages/python.scm (python-iso8601, python2-iso8601): New variables.
 2015-09-14 00:14:55 +02:00
Cyril Roelandt 8c692a5258 gnu: Add python-wrapt 
* gnu/packages/python.scm (python-wrapt, python2-wrapt): New variables.
 2015-09-14 00:14:53 +02:00
Cyril Roelandt 6e5e39f406 gnu: Add python-netaddr. 
* gnu/packages/python.scm (python-netaddr, python2-netaddr): New variables.
 2015-09-13 23:21:54 +02:00
Ludovic Courtès 75710da667 Merge branch 'master' into core-updates 2015-09-13 21:28:01 +02:00
宋文武 62a9a23bf9 gnu: python-setuptools: Update to 18.3.1. 
* gnu/packages/python.scm (python-setuptools): Update to 18.3.1.
 2015-09-13 18:39:39 +08:00
Mathieu Lirzin 1cd4027cfd ui: Add package-description-string. 
Provide support for Texinfo's markup in package description.

* guix/ui.scm (%text-width): New parameter.
  (texi->plain-text): New variable.
  (package->recutils): Use them.
  (package-description-string): New variable.
* emacs/guix-main.scm (%package-param-alist): Use it.
* gnu/packages/perl.scm (perl-devel-globaldestruction)
  (perl-devel-lexalias, perl-exporter-lite): Adapt to Texinfo's markup.
* gnu/packages/python.scm (python2-empy): Likewise.
 2015-09-08 07:44:53 +02:00
Cyril Roelandt 05de40c5d3 gnu: python-testtools: fix propagated inputs. 
* gnu/packages/python.scm (python-testools): turn python-fixtures and
  python-testtools into propagated inputs.
 2015-09-08 00:14:11 +02:00
宋文武 d582eaacec gnu: Add python-fonttools. 
* gnu/packages/python.scm (python-fonttools, python2-fonttools): New
  variables.
 2015-09-06 21:52:21 +08:00
Leo Famulari 641c9871a5 gnu: Add python-msgpack. 
* gnu/packages/python.scm (python-msgpack, python2-msgpack): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-09-02 21:55:31 +03:00
Leo Famulari 89b2e0b0b8 gnu: Add python-llfuse. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-09-02 21:55:31 +03:00
Cyril Roelandt 7e7b27d906 gnu: add python-appdirs. 
* gnu/packages/python.scm (python-appdirs, python2-appdirs): New variables.
 2015-09-01 23:08:37 +02:00
Ricardo Wurmus 5faa5ce4ef gnu: Add python-ly. 
* gnu/packages/python.scm (python-ly): New variable.
 2015-08-31 22:23:09 +02:00
Ludovic Courtès 96c4621056 gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases. 
* gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools,
  plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'.
* gnu/packages/check.scm (catch-framework): Likewise.
* gnu/packages/code.scm (global): Likewise.
* gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools):
  Likewise.
* gnu/packages/engineering.scm (fastcap, fasthenry): Likewise.
* gnu/packages/gnuzilla.scm (nss): Likewise.
* gnu/packages/guile.scm (guile-minikanren): Likewise.
* gnu/packages/java.scm (swt): Likewise.
* gnu/packages/make-bootstrap.scm (%static-binaries): Likewise.
* gnu/packages/maths.scm (lpsolve): Likewise.
* gnu/packages/mp3.scm (mpc123): Likewise.
* gnu/packages/ninja.scm (ninja): Likewise.
* gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise.
* gnu/packages/screen.scm (dtach): Likewise.
* gnu/packages/synergy.scm (synergy): Likewise.
* gnu/packages/textutils.scm (utf8proc): Likewise.
* gnu/packages/version-control.scm (git-test-sequence): Likewise.
* gnu/packages/wicd.scm (wicd): Likewise.
 2015-08-29 01:25:08 +02:00
Cyril Roelandt 98bdee6725 gnu: Bump python-six to 1.9.0. 
* gnu/packages/python.scm (python-six): Bump to 1.9.0.
 2015-08-09 16:44:39 +02:00
Eric Dvorsak ff6f33cf80 gnu: python-2: Update to 2.7.10. 
* gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch,
  gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2): Update to 2.7.10.  Remove patches.
  Update comment showing test failures.
 2015-08-06 16:33:54 -04:00
Eric Dvorsak 8d801045ff gnu: Move python2-ansible to (gnu packages admin). 
* gnu/packages/python.scm (python2-ansible): Move to ...
    * gnu/packages/admin.scm (ansible): ... here.
 2015-08-01 21:57:26 -04:00
Federico Beffa 3a0b1b9afc gnu: python-ipython: Update to 3.2.1. 
* gnu/packages/python.scm (python-ipython, python2-ipython): Update to 3.2.1.
  Add optional dependencies required for notebooks.
  (python-ipython): Fix and enable tests (1 still failing).
 2015-08-01 12:37:14 +02:00
Federico Beffa 4aadb1dff7 gnu: Add python-terminado. 
* gnu/packages/python.scm (python-terminado, python2-terminado): New
  variables.
 2015-08-01 12:37:13 +02:00
Federico Beffa 6d992d078e gnu: Add python-ptyprocess. 
* gnu/packages/python.scm (python-ptyprocess, python2-ptyprocess): New
  variables.
 2015-08-01 12:37:13 +02:00
Federico Beffa 61b9ac53c3 gnu: Add python-mistune. 
* gnu/packages/python.scm (python-mistune, python2-mistune): New variables.
 2015-08-01 12:37:13 +02:00
Eric Dvorsak 9589c6890a gnu: Add python2-ansible. 
* gnu/packages/python.scm (python2-ansible): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:32 +03:00
Eric Dvorsak f9da1d8afa gnu: Add python-passlib. 
* gnu/packages/python.scm (python-passlib, python2-passlib): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:32 +03:00
Eric Dvorsak feb0d9c340 gnu: Add python-py-bcrypt. 
* gnu/packages/python.scm (python-py-bcrypt, python2-py-bcrypt): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:32 +03:00
Eric Dvorsak 429fdea1ab gnu: Add python-paramiko. 
* gnu/packages/python.scm (python-paramiko, python2-paramiko): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:32 +03:00
Eric Dvorsak de73dbf62d gnu: Add python-httplib2. 
* gnu/packages/python.scm (python-httplib2, python-httplib2): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:31 +03:00
Eric Dvorsak 670398751e gnu: Add python-ecdsa. 
* gnu/packages/python.scm (python-ecdsa, python2-ecdsa): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:31 +03:00
Eric Dvorsak 52323f32fa gnu: Add python-ccm. 
* gnu/packages/python.scm (python-ccm, python2-ccm): New variables.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:31 +03:00
Eric Dvorsak 345f0611af gnu: Add python2-pycrypto. 
* gnu/packages/python.scm (python2-pycrypto): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2015-07-31 10:59:31 +03:00
Christopher Allan Webber b8050e7183 gnu: Add pelican. 
* gnu/packages/python.scm (pelican): New variable.
 2015-07-26 14:29:08 -04:00
Christopher Allan Webber 59ad30e3a8 gnu: Add python-blinker. 
* gnu/packages/python.scm (python-blinker, python2-blinker): New variables.
 2015-07-26 13:13:36 -04:00
Ludovic Courtès e5358a6bac gnu: python-pillow: Disable egg compression. 
Partly fixes <http://bugs.gnu.org/20765>.

* gnu/packages/python.scm (python-pillow)[arguments]: Rewrite using
  'modify-phases'.  Add 'disable-egg-compression' phase.
 2015-07-20 23:15:24 +02:00
Ricardo Wurmus d05c6da05d gnu: Add python-gridmap. 
* gnu/packages/python.scm (python-gridmap, python2-gridmap): New variables.
 2015-07-20 11:50:43 +02:00
Ricardo Wurmus aaf625b8dc gnu: Add python-psutil. 
* gnu/packages/python.scm (python-psutil, python2-psutil): New variables.
 2015-07-20 11:50:43 +02:00
Ricardo Wurmus c9b1b4f9c6 gnu: Add python-rpy2. 
* gnu/packages/python.scm (python-rpy2, python2-rpy2): New variables.
 2015-07-20 11:50:43 +02:00
Mark H Weaver e170571887 Merge branch 'core-updates' 2015-07-19 20:28:56 -04:00
Mark H Weaver 1b4e48d498 Merge branch 'master' into core-updates 2015-07-19 18:12:34 -04:00
Christopher Allan Webber f4de5b3bf1 gnu: Add python-feedgenerator. 
* gnu/packages/python.scm (python-feedgenerator, python2-feedgenerator): New
  variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-07-19 23:17:52 +02:00
Alex Kost e881752c39 gnu packages: Clean up synopses and descriptions. 
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
  gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm,
  gnu/packages/code.scm, gnu/packages/compression.scm,
  gnu/packages/databases.scm, gnu/packages/enchant.scm,
  gnu/packages/firmware.scm, gnu/packages/fonts.scm,
  gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm,
  gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm,
  gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm,
  gnu/packages/haskell.scm, gnu/packages/language.scm,
  gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm,
  gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm,
  gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm,
  gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm,
  gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm,
  gnu/packages/perl.scm, gnu/packages/pretty-print.scm,
  gnu/packages/pulseaudio.scm, gnu/packages/python.scm,
  gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm,
  gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm,
  gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm,
  gnu/packages/unrtf.scm, gnu/packages/version-control.scm,
  gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm,
  gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm:
  Fix typos.  Trim long lines.  Add missing periods in the end of sentences.
  Use double spaces between sentences.  Remove trailing whitespaces.
 2015-07-18 13:05:01 +03:00
Mark H Weaver 46472ecd00 gnu: python: Set source file times to 1980 to fix test. 
* gnu/packages/python.scm (python-2)[arguments]: Use 'modify-phases'.  Return
  true from phases where needed.  Add 'set-source-file-times-to-1980' phase.
  Add (ice-9 ftw) to #:modules.
 2015-07-15 13:31:51 -04:00
Cyril Roelandt 0e88cbf8c1 gnu: python-testtools: make python-mimeparse a propagated input 
* gnu/packages/python.scm (python-testtools): move python-mimeparse from inputs
  to propagated-inputs.
 2015-07-08 02:28:51 +02:00
Andreas Enge cc2b77dfc7 gnu: Move content of openssl module into tls module. 
* gnu/packages/openssl.scm (openssl, perl-net-ssleay): Move to...
* gnu/packages/tls.scm: ...here.
* gnu/packages/openssl.scm: Delete file.
* gnu-system.am (GNU_SYSTEM_MODULES): Unregister deleted file.
* gnu/packages/{admin.scm, bittorrent.scm, certs.scm, ci.scm,
  cyrus-sasl.scm, databases.scm, dns.scm, ebook.scm, enlightenment.scm,
  gnunet.scm, libreoffice.scm, links.scm, mail.scm, messaging.scm,
  networking.scm, ntp.scm, openldap.scm, package-management.scm, pdf.scm,
  python.scm, qt.scm, rdesktop.scm, rdf.scm, ruby.scm, ssh.scm,
  synergy.scm, tor.scm, version-control.scm, video.scm, vpn.scm,
  w3m.scm, web.scm, weechat.scm, xiph.scm}: Adapt module import.
 2015-07-05 18:27:24 +02:00
Eric Bavier 7362371da5 gnu: python-mccabe: Fix license field. 
* gnu/packages/python.scm (python-mccabe)[license]: 'expat' ->
  'license:expat'.
 2015-06-29 15:34:35 -05:00
Cyril Roelandt e8df8f476e gnu: Add python-flake8. 
* gnu/packages/python.scm (python-flake8, python2-flake8): New variables.
 2015-06-30 00:07:56 +02:00
Cyril Roelandt a59e017cb1 gnu: Add python-mccabe. 
* gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables.
 2015-06-30 00:07:56 +02:00
Cyril Roelandt e31d7f4420 gnu: Add python-pyflakes. 
* gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables.
 2015-06-30 00:07:55 +02:00
Cyril Roelandt d889e6c4d9 gnu: Add python-pep8. 
* gnu/packages/python.scm (python-pep8, python2-pep8): New variables.
 2015-06-30 00:07:55 +02:00
Ricardo Wurmus 3a1bfe186d gnu: Add python2-fastlmm. 
* gnu/packages/python.scm (python2-fastlmm): New variable.
 2015-06-26 15:29:01 +02:00
Ricardo Wurmus 0dde623211 gnu: Add python2-pysnptools. 
* gnu/packages/python.scm (python2-pysnptools): New variable.
 2015-06-26 15:29:01 +02:00
Ricardo Wurmus 19afbea136 gnu: Replace versioned gfortran inputs with just "gfortran". 
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
  "gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
   (superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
   (octave)[native-inputs]: Likewise.
   (gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
  "gfortran".
 2015-06-25 18:28:54 +02:00
Ricardo Wurmus be0a4c261e gnu: python-scikit-learn: Update to 0.16.1. 
* gnu/packages/python.scm (python-scikit-learn): Update to 0.16.1.
 2015-06-15 10:36:42 +02:00
Ricardo Wurmus 2f6b3d2e7e gnu: python-scikit-learn: Use OpenBLAS instead of ATLAS. 
* gnu/packages/python.scm (python-scikit-learn)[inputs]: Replace "atlas" with
  "openblas".
* gnu/packages/python.scm (python-scikit-learn)[arguments]: Remove build phase
  'set-environment-variables, which is only needed when ATLAS is used.
 2015-06-15 10:36:42 +02:00
Ricardo Wurmus 719b01c157 gnu: python-scipy: Build with OpenBLAS and lapack. 
* gnu/packages/python.scm (python-scipy)[inputs]: Remove "atlas", add "lapack"
  and "openblas".
* gnu/packages/python.scm (python-scipy)[arguments]: Replace phase
  "set-environment-variables" with "configure-openblas".
 2015-06-15 10:36:42 +02:00
Ricardo Wurmus cba256f8fa gnu: python-numpy-bootstrap: Add lapack to inputs. 
* gnu/packages/python.scm (python-numpy-bootstrap)[inputs]: Add lapack to
  inputs, because OpenBLAS does not include lapack functions.
 2015-06-15 10:36:41 +02:00
Mark H Weaver 4c50e5ab3a gnu: python: Disable ssl test that fails with openssl-1.0.2b. 
* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
 2015-06-13 23:01:07 -04:00
Ricardo Wurmus dbdfe51598 gnu: python-numpy: Build against OpenBLAS. 
* gnu/packages/python.scm (python-numpy)[inputs]: Use "openblas" instead of
  "atlas".
* gnu/packages/python.scm (python-numpy)[arguments]: Configure build against
  OpenBLAS.

Modified-By: Mark H Weaver <mhw@netris.org>
 2015-06-07 17:30:40 -04:00
宋文武 5ff408d998 python-pillow: Update to 2.8.1, remove duplicated ones. 
* gnu/packages/python.scm (python-pillow): Update to 2.8.1.
  [inputs]: Add freetype and libwebp.
  (python-pillow, python2-pillow): Remove duplicated variables.
 2015-05-29 21:01:42 +08:00
Andreas Enge 2e88d113aa gnu: dbus-glib: Propagate inputs dbus and glib. 
* gnu/packages/glib.scm (dbus-glib): Propagate inputs dbus and glib.
* gnu/packages/audio.scm (patchage),
  gnu/packages/gnuzilla.scm (icecat),
  gnu/packages/python.scm (python-dbus): Drop inputs dbus and glib.
* gnu/packages/gnome.scm (colord, gconf, gnome-vfs, upower),
  gnu/packages/mail.scm (claws-mail),
  gnu/packages/messaging.scm (hexchat),
  gnu/packages/wicd.scm (wicd): Drop input dbus.
 2015-05-23 17:12:00 +02:00
Ricardo Wurmus 748cef5be9 gnu: Add python-rq. 
* gnu/packages/python.scm (python-rq, python2-rq): New variables.
 2015-05-22 15:23:23 +02:00
Ricardo Wurmus 5394a6a653 gnu: Add python-redis. 
* gnu/packages/python.scm (python-redis, python2-redis): New variables.
 2015-05-22 15:23:23 +02:00
Ricardo Wurmus 12c270ddd4 gnu: Add python-click. 
* gnu/packages/python.scm (python-click, python2-click): New variables.
 2015-05-22 15:23:23 +02:00
Ricardo Wurmus 4520354282 gnu: Add python-pyzmq. 
* gnu/packages/python.scm (python-pyzmq, python2-pyzmq): New variables.
 2015-05-22 11:03:00 +02:00
Ricardo Wurmus 35de1fbd90 gnu: Add python-seaborn. 
* gnu/packages/python.scm (python-seaborn, python2-seaborn): New variables.
 2015-05-15 16:33:45 +02:00
Ricardo Wurmus d072efcb6d gnu: Add python-pandas. 
* gnu/packages/python.scm (python-pandas, python2-pandas): New variables.
 2015-05-15 16:33:45 +02:00
Ricardo Wurmus 12f8f9bb3e gnu: Add python-scikit-image. 
* gnu/packages/python.scm (python-scikit-image, python2-scikit-image): New
  variables.
 2015-05-15 16:33:45 +02:00
Mark H Weaver a3f61425a6 gnu: scons: Update to 2.3.4. 
* gnu/packages/python.scm (scons): Update to 2.3.4.
 2015-05-07 05:06:26 -04:00
Ricardo Wurmus 90fc547fa0 gnu: Add python-sympy. 
* gnu/packages/python.scm (python-sympy, python2-sympy): New variables.
 2015-05-04 15:21:47 +02:00
Ricardo Wurmus 310d218f64 gnu: Add python-tornado. 
* gnu/packages/python.scm (python-tornado, python2-tornado): New variables.
 2015-04-28 17:01:01 +02:00
Ricardo Wurmus ed377cc6cf gnu: Add python2-backport-ssl-match-hostname. 
* gnu/packages/python.scm (python2-backport-ssl-match-hostname): New variable.
 2015-04-28 17:01:01 +02:00
宋文武 feaae48499 gnu: Add python-waf. 
* gnu/packages/python.scm (python-waf, python2-waf): New variables.
 2015-04-22 09:53:24 +08:00
宋文武 0e05d01e4f gnu: python: Use 'version-major+minor' to compute PYTHONPATH. 
Fixes a regression introduced in 08c0450.

* gnu/packages/python.scm (python)[native-search-paths]: Use
  'version-major+minor' to compute PYTHONPATH.
 2015-04-14 15:11:51 +08:00
Cyril Roelandt 08c045091e python: Update to 3.4.3 
* gnu/packages/python.scm (python): Update from 3.3.5 to 3.4.3.
* gnu/packages/patches/python-fix-tests.patch: Update the required test fixes.
* gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove it...
* gnu-system.am (dist_patch_DATA): ... and do not reference it here.
 2015-04-10 00:19:46 +02:00
Ricardo Wurmus 2c0499ad87 gnu: Add python-drmaa. 
* gnu/packages/python.scm (python-drmaa, python2-drmaa): New variables.
 2015-04-07 10:51:21 +02:00
David Thompson 0234ca06ce gnu: Add python-singledispatch. 
* gnu/packages/python.scm (python-singledispatch, python2-singledispatch): New
  variables.
 2015-04-05 12:42:36 -04:00
David Thompson ae64112828 gnu: python-requests: Fix Python 2 version and add support for Python 3. 
* gnu/packages/python.scm (python-requests): New variable.
  (python2-requests): Generate based on Python 3 variant.
 2015-04-05 12:38:48 -04:00
Ricardo Wurmus 32f77c0445 gnu: Add python-networkx. 
* gnu/packages/python.scm (python-networkx, python2-networkx): New variables.
 2015-03-31 20:00:21 +02:00
Ricardo Wurmus 3cff95cbee gnu: Add python-decorator. 
* gnu/packages/python.scm (python-decorator, python2-decorator): New
  variables.
 2015-03-31 20:00:00 +02:00
Mark H Weaver 1f43445745 gnu: python: Do not use patchelf. 
* gnu/packages/python.scm (python-2): Add rpath for lib directory of output to
  LDFLAGS.  Remove 'patchelf' from inputs.  Remove #:modules and
  #:imported-modules from arguments.  Remove 'add-lib-to-runpath' phase.
  (python): Do not add #:modules to inherited package arguments.
 2015-03-24 19:30:33 -04:00
Ricardo Wurmus ef5cbf9bae gnu: Add python-h5py and python2-h5py. 
* gnu/packages/python.scm (python-h5py, python2-h5py): New variables.
 2015-03-23 10:56:13 +01:00
Ludovic Courtès db62afa55a gnu: Add python2-xlib. 
* gnu/packages/python.scm (python2-xlib): New variable.
 2015-03-17 13:49:18 +01:00
Ludovic Courtès 166191b377 gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'. 
* gnu/packages/avr.scm, gnu/packages/compression.scm,
  gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm,
  gnu/packages/databases.scm, gnu/packages/firmware.scm,
  gnu/packages/flex.scm, gnu/packages/fontutils.scm,
  gnu/packages/gd.scm, gnu/packages/ghostscript.scm,
  gnu/packages/gnunet.scm, gnu/packages/graphics.scm,
  gnu/packages/hugs.scm, gnu/packages/image.scm,
  gnu/packages/linux.scm, gnu/packages/mail.scm,
  gnu/packages/maths.scm, gnu/packages/mit-krb5.scm,
  gnu/packages/python.scm, gnu/packages/rdf.scm,
  gnu/packages/ssh.scm, gnu/packages/tcl.scm,
  gnu/packages/xdisorg.scm, gnu/packages/xiph.scm,
  gnu/packages/yasm.scm, gnu/packages/zip.scm: Use 'non-copyleft'
  instead of 'bsd-style'.
 2015-03-14 19:27:14 +01:00
Mark H Weaver 1cb9c00614 gnu: python-testlib: Fix license field. 
Fixes a problem introduced in a1920bc9f2.
Debugged by David Thompson.

* gnu/packages/python.scm (python-testlib)[license]: 'expat' ->
  'license:expat'.
 2015-03-07 13:58:50 -05:00
Federico Beffa a1920bc9f2 gnu: Add python-testlib and python2-testlib. 
* gnu/packages/python.scm (python-testlib, python2-testlib): New variables.
 2015-03-07 15:08:36 +01:00
Andreas Enge 516277cb14 gnu: python2-pil: Adapt to newer Freetype. 
* gnu/packages/python.scm (python2-pil): Add snippet.
 2015-03-07 00:56:43 +01:00
Ludovic Courtès ce0614ddb0 gnu: Move 'which' to (gnu packages base). 
* gnu/packages/which.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/base.scm (which): New variable.
* gnu/packages/aspell.scm, gnu/packages/audio.scm,
  gnu/packages/autogen.scm, gnu/packages/cdrom.scm,
  gnu/packages/compression.scm, gnu/packages/datamash.scm,
  gnu/packages/games.scm, gnu/packages/glib.scm,
  gnu/packages/gnu-pw-mgr.scm, gnu/packages/gnutls.scm,
  gnu/packages/gps.scm, gnu/packages/guile.scm,
  gnu/packages/java.scm, gnu/packages/libevent.scm,
  gnu/packages/linux.scm, gnu/packages/lisp.scm,
  gnu/packages/node.scm, gnu/packages/ntp.scm,
  gnu/packages/orpheus.scm, gnu/packages/pciutils.scm,
  gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/sawfish.scm,
  gnu/packages/scheme.scm, gnu/packages/ssh.scm,
  gnu/packages/statistics.scm, gnu/packages/texlive.scm,
  gnu/packages/wdiff.scm: Adjust accordingly.
 2015-03-04 17:23:27 +01:00
Ludovic Courtès 1289062522 Merge branch 'core-updates'. 2015-03-04 14:07:23 +01:00
Ricardo Wurmus 92cb152b37 gnu: Add snakemake. 
* gnu/packages/python.scm (snakemake): New variable.
 2015-03-03 10:22:23 +01:00
Ricardo Wurmus 240ca4aae7 gnu: Add Scikit-learn. 
* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): New
  variables.
 2015-03-02 14:09:10 +01:00
Ricardo Wurmus 8d12be1eb1 gnu: Add pyyaml. 
* gnu/packages/python.scm (python-pyyaml, python2-pyyaml): New variables.
 2015-03-02 11:31:14 +01:00
Mark H Weaver 3820d39739 Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/gnupg.scm
 2015-03-01 19:05:29 -05:00
Mark H Weaver f586c87705 gnu: Add 'file-name' fields for github source tarballs without a name. 
* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb),
  gnu/packages/audio.scm (jack-2, lvtk),
  gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie),
  gnu/packages/game-development.scm (tiled),
  gnu/packages/games.scm (minetest-data, minetest, retroarch),
  gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson),
  gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask),
  gnu/packages/mail.scm (offlineimap, libetpan),
  gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja),
  gnu/packages/nutrition.scm (gourmet),
  gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf),
  gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add
  'file-name' field to origin.
 2015-02-28 09:49:01 -05:00
Andreas Enge 88c268347b gnu: python: Drop special handling of python2-numpydoc as input. 
* gnu/packages/python.scm (python2-numpy, python2-matplotlib,
  python2-ipython): Keep input python2-numpydoc created by
  package-with-python2.
 2015-02-28 01:17:57 +01:00
Andreas Enge 5e4d8f6710 gnu: python-numpydoc: Drop one test. 
* gnu/packages/python.scm (python-numpydoc): Drop one test for all Python
  versions.
  (python2-numpydoc): Define it by package-with-python2 without modifications.
 2015-02-28 01:08:37 +01:00
Andreas Enge 7ca0dbc3f0 gnu: python2-py2cairo: Rename to python2-pycairo. 
* gnu/packages/gtk.scm (python2-py2cairo): Rename to ...
  (python2-pycairo): ... this
  (python2-pygtk): Adapt input.
* gnu/packages/glib.scm (python2-pygobject-2): Adapt input.
* gnu/packages/python.scm (package-with-python2): Adapt input.
 2015-02-27 23:53:57 +01:00
Ludovic Courtès 7184b4b1bd gnu: Remove now unneeded 'localedef' invocations. 
This is a followup to commit b0fd2bd.

* gnu/packages/gawk.scm (gawk)[arguments] <install-locales>: Add comment
  on why we leave this here.
* gnu/packages/guile.scm (guile-ncurses)[arguments]: Remove
  'install-locales' phase.
* gnu/packages/swig.scm (swig)[arguments]: Likewise.
* gnu/packages/python.scm (python-matplotlib): Remove 'LOCPATH' setting
  and 'localedef' invocation.
  (python-scipy): Likewise.
 2015-02-27 15:08:37 +01:00
Ludovic Courtès da6dd842d0 gnu: Remove now unneeded 'unpack' phases for unzip. 
This is a followup to commit cd0385b.

* gnu/packages/bioinformatics.scm (hisat)[arguments]: Remove 'unpack'
  phase.
* gnu/packages/image.scm (freeimage): Likewise.
* gnu/packages/python.scm (python2-cssutils): Likewise.
 2015-02-27 15:08:37 +01:00
Andreas Enge 3dd7547666 gnu: python-html5lib: Add propagated input. 
* gnu/packages/python.scm (python-html5lib): Add propagated input python-six.
  (python2-html5lib): Add propagated input python2-six.
 2015-02-25 00:58:20 +01:00
Andreas Enge 0c20025c05 gnu: Add python2-six. 
* gnu/packages/python.scm (python2-six): New variable.
 2015-02-25 00:58:20 +01:00
Andreas Enge 89b5c60ef9 gnu: python2-oauthlib: Drop inherited fields. 
* gnu/packages/python.scm (python2-oauthlib): Drop inherited fields.
 2015-02-23 18:41:10 +01:00
Ricardo Wurmus f18f8b7383 gnu: python-scipy: install UTF-8 locale. 
* gnu/packages/python.scm (python-scipy): Install en_US.UTF-8 locale in
  install-doc phase to avoid encoding error.
 2015-02-20 14:25:38 +01:00
Ricardo Wurmus 6754032f0c gnu: matplotlib: install UTF-8 locale. 
* gnu/packages/python.scm (python-matplotlib): Install en_US.UTF-8 locale in
  install-doc phase to avoid encoding error.
 2015-02-20 14:25:30 +01:00
Andreas Enge d3d656c5fb gnu: python-setuptools: Update to 12.1. 
*  gnu/packages/python.scm (python-setuptools, python2-setuptools):
     Update to 12.1.
 2015-02-15 23:10:58 +01:00
Andreas Enge 60357f99c4 gnu: Add python-netifaces. 
* gnu/packages/python.scm (python-netifaces, python2-netifaces):
    New variables.
 2015-02-15 10:46:43 +01:00
Andreas Enge 880ff77c17 gnu: Add python-cssselect. 
* gnu/packages/python.scm (python-cssselect, python2-cssselect):
    New variables.
 2015-02-14 19:39:20 +01:00
Andreas Enge 092e86f54f gnu: Add python2-cssutils. 
* gnu/packages/python.scm (python2-cssutils): New variable.
 2015-02-14 19:25:55 +01:00
Andreas Enge bec07a7c08 gnu: Add python2-pil. 
* gnu/packages/python.scm (python2-pil): New variable.
 2015-02-14 18:58:13 +01:00
Ludovic Courtès abde5f375f gnu: python-apsw: Fix license. 
* gnu/packages/python.scm (python-apsw)[license]: Change to
  LICENSE:ZLIB.
 2015-02-14 00:43:41 +01:00
Andreas Enge 4ed206639b gnu: Add python-pillow. 
* gnu/packages/python.scm (python-pillow, python2-pillow): New variables.
 2015-02-13 21:03:48 +01:00
Andreas Enge 26b307e2cc gnu: Add python-lxml. 
* gnu/packages/python.scm (python-lxml, python2-lxml): New variables.
 2015-02-12 21:14:38 +01:00
Andreas Enge bd3fa66676 gnu: python: Prefix expat license by "license:" to avoid conflicts with 
expat from the xml module.

* gnu/packages/python.scm: Prefix expat license imported from
    (guix licenses).
* gnu/packages/python.scm (python-lockfile, python-mock, python-pysam,
    python-extras, python-mimeparse, python-py, python-pytest,
    python-scripttest, python-jsonschema, python-pyjwt, python-virtualenv,
    python-sphinx-rtd-theme, python-pyparsing, python-cffi, python-xcffib,
    python-html5lib, python-dbus): Adapt license field.
 2015-02-12 21:07:14 +01:00
Andreas Enge a6ac8332be gnu: Add python-apsw. 
* gnu/packages/python.scm (python-apsw, python2-apsw): New variables.
 2015-02-12 20:19:31 +01:00
Ricardo Wurmus ad320b20ee gnu: Add Sphinx RTD theme. 
* gnu/packages/python.scm (python-sphinx-rtd-theme, python2-sphinx-rtd-theme):
  New variables.
 2015-02-09 10:29:55 +01:00
Mark H Weaver b52af02b5d gnu: Add python2-dbus. 
* gnu/packages/python.scm (python2-dbus): New variable.
 2015-02-04 01:36:09 -05:00
Pierre-Antoine Rault d95a56c632 gnu: Add python-dbus. 
* gnu/packages/python.scm (python-dbus): Add it. Makes use of dbus,
  dbus-glib and glib itself.
 2015-02-04 01:36:03 -05:00
Mark H Weaver be1f44bbd6 gnu: python-urwid: Remove Fedora mirror from source URI list. 
* gnu/packages/python.scm (python-urwid)[source]: Remove Fedora mirror.
 2015-02-04 00:11:06 -05:00
Mark H Weaver e99f421185 gnu: Add python-urwid and python2-urwid. 
Based on preliminary work by Omar Radwan <toxemicsquire4@gmail.com>.

* gnu/packages/python.scm (python-urwid, python2-urwid): New variables.
 2015-02-03 00:33:08 -05:00
Mark H Weaver 4e7a137a83 Revert "gnu: python-matplotlib: Remove python-pillow input." 
python-pillow is now fixed, so we can add it back.
This reverts commit dfbc33dceb.
 2015-02-02 15:19:12 -05:00
Mark H Weaver 5ade90ba69 Merge branch 'wip-gobject-introspection' 2015-01-25 21:15:13 -05:00
Andreas Enge e066928977 gnu: python-pyparsing: Update to 2.0.3. 
* gnu/packages/python.scm (python-pyparsing, python2-pyparsing): Update to 2.0.3.
 2015-01-23 21:50:56 +01:00
Andreas Enge 673ab897a3 gnu: Add python-html5lib. 
* gnu/packages/python.scm (python-html5lib, python2-html5lib): New variables.
 2015-01-20 22:42:28 +01:00
Andreas Enge 03411993a8 gnu: Add python-isodate. 
* gnu/packages/python.scm (python-isodate, python2-isodate): New variables.
 2015-01-20 22:16:58 +01:00
Federico Beffa da6ce3f1b8 gnu: python-scipy: Update to 0.15.0. 
* gnu/packages/python.scm (python-scipy): Update to 0.15.0.
 2015-01-18 18:05:53 +01:00
Federico Beffa 3e6ccb5355 gnu: python-matplotlib: Update comments. 
* gnu/packages/python.scm (python-matplotlib): Update comments as, with the
  patched 'gobject-introspection', setting LD_LIBRARY_PATH at run time is not
  anymore necessary.  It's still necessary at build time.
 2015-01-18 18:05:53 +01:00
Federico Beffa dfbc33dceb gnu: python-matplotlib: Remove python-pillow input. 
* gnu/packages/python.scm (python-matplotlib): Remove python-pillow input as
  it currently is broken.
 2015-01-18 18:05:53 +01:00
Federico Beffa ae1ab9fe82 gnu: Add IPython. 
* gnu/packages/python.scm (python-ipython, python2-ipython): New variable.
 2015-01-16 17:51:47 +01:00
Mark H Weaver 8cbb67e045 Merge branch 'master' into core-updates 2014-12-30 12:23:32 -05:00
Ludovic Courtès 07af3e5efe gnu: Fix or update a number of 'home-page' fields. 
* gnu/packages/fltk.scm (fltk): Fix 'home-page'.
* gnu/packages/fonts.scm (font-bitstream-vera): Likewise, and fix
  license URL.
* gnu/packages/games.scm (gnubg, cmatrix, chess): Fix 'home-page'.
* gnu/packages/kde.scm (attica): Likewise.
* gnu/packages/mail.scm (fetchmail): Likewise.
* gnu/packages/popt.scm (popt): Likewise.
* gnu/packages/python.scm (python-mock): Likewise.
* gnu/packages/stalonetray.scm (stalonetray): Likewise.
 2014-12-28 17:57:37 +01:00
Ludovic Courtès af07095516 packages: Add 'file-type' field to 'search-path-specification'. 
Fixes <http://bugs.gnu.org/18033>.

* guix/packages.scm (<search-path-specification>): Rename 'directories'
  field to 'files'.  Add 'file-type'.
  (search-path-specification->sexp): Honor 'file-type'.
* gnu/packages/autotools.scm, gnu/packages/bootstrap.scm,
  gnu/packages/cross-base.scm, gnu/packages/games.scm,
  gnu/packages/gcc.scm, gnu/packages/glib.scm,
  gnu/packages/guile.scm, gnu/packages/man.scm,
  gnu/packages/perl.scm, gnu/packages/pkg-config.scm,
  gnu/packages/python.scm, gnu/packages/ruby.scm,
  gnu/packages/xfce.scm: Change 'directories' to 'files'.
* tests/packages.scm ("search paths"): Change 'directories' field to
  'files'.
* guix/scripts/environment.scm (for-each-search-path): Likewise.
 2014-12-27 23:22:49 +01:00
Ricardo Wurmus be7134bf75 gnu: Add pysam. 
* gnu/packages/python.scm (python-pysam, python2-pysam): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-12-26 23:28:13 +01:00
Ludovic Courtès 764c077b30 Revert "gnu: matplotlib: Comment out python2-matplotlib." 
This reverts commit afc720d34c.
 2014-12-23 19:17:17 +01:00
Federico Beffa afc720d34c gnu: matplotlib: Comment out python2-matplotlib. 
* gnu/packages/python.scm (python2-matplotlib, python2-scipy, python2-numpy):
  Comment out python2-matplotlib and the packages making use of it as the
  generation of the derivation of these packages takes very long.
 2014-12-23 17:56:48 +01:00
Federico Beffa 9e0997230c gnu: cairocffi: Move to python module. 
* gnu/packages/gtk.scm, gnu/packages/python.scm (python-cairocffi,
  python2-cairocffi): Move variables from gtk to python module to avoid
  circular dependency.

Reported by Mark H Weaver <mhw@netris.org>
 2014-12-18 22:00:19 +01:00
Federico Beffa 25f9a068f2 gnu: matplotlib: Add gtk3 backends and optional dependency. Adjust inputs. 
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Add gtk3
  backends with the necessary inputs and a 'configure-environment' phase.  Add
  the optional 'python-pillow' dependency.  Move 'python-pyparsing' from
  'inputs' to 'propagated-inputs' as it is required at run time.
 2014-12-18 17:58:10 +01:00
Federico Beffa 6fa144692c gnu: Add xcffib 
* gnu/packages/python.scm (python-xcffib, python2-xcffib): New variables.
 2014-12-18 17:58:10 +01:00
Federico Beffa 6a84316848 Revert "gnu: python-numpy-bootstrap: Reduce matrix size in failing test." 
This reverts commit 31557440c2 as it did not
provide the desired effect.  The test is still failing.
 2014-12-16 18:37:13 +01:00
Federico Beffa 31557440c2 gnu: python-numpy-bootstrap: Reduce matrix size in failing test. 
* gnu/packages/python.scm (python-numpy-bootstrap): Add phase
  'fix-failing-tests.
 2014-12-14 20:01:22 +01:00
Federico Beffa c1125a04bb gnu: python-numpy-bootstrap: Make tests verbose. 
* gnu/packages/python.scm (python-numpy-bootstrap): Make tests verbose to
  allow test failure debugging on hydra.
 2014-12-13 09:44:26 +01:00
Federico Beffa 57c3f71632 gnu: Add cffi. 
* gnu/packages/python.scm (python-cffi, python2-cffi): New variables.
 2014-12-10 14:27:44 +01:00
Federico Beffa a415f036e8 gnu: Add pycparser. 
* gnu/packages/python.scm (python-pycparser, python2-pycparser): New variables.
 2014-12-09 13:23:59 +01:00
Federico Beffa bb986599e6 gnu: Add scipy. 
* gnu/packages/python.scm (python-scipy, python2-scipy): New variables.
 2014-12-04 16:06:40 +01:00
Eric Bavier fbcfa73074 gnu: Add python-pycairo. 
* gnu/packages/gtk.scm (python-pycairo, python2-py2cairo): New variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier ea5456c88c gnu: Add python-elib.intl. 
* gnu/packages/python.scm (python-elib.intl, python2-elib.intl): New
  variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier 1671c07cc7 gnu: Add python-distutils-extra. 
* gnu/packages/python.scm (python-distutils-extra, python2-distutils-extra):
  New variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier c937562e2f gnu: Add python-pillow. 
* gnu/packages/python.scm (python-pillow, python2-pillow): New variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier 94914805c2 gnu: Add python-sqlalchemy. 
* gnu/packages/python.scm (python-sqlalchemy, python2-sqlalchemy): New
  variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier b88e1b0a62 gnu: python: Add sqlite input. 
* gnu/packages/patches/python-sqlite-3.8.4-test-fix.patch,
  gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch: New patches.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/python.scm (python-2)[source]: Add patch.
  [inputs]: Add sqlite.
  (python)[source]: Add patch.
 2014-12-02 08:33:31 -06:00
Federico Beffa 2ee8869a69 gnu: Add numpy. 
* gnu/packages/python.scm (python-numpy, python2-numpy): New variables.
 2014-12-02 11:12:44 +01:00
Federico Beffa 1c65314c60 gnu: Add matplotlib. 
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): New
  variables.
 2014-11-30 16:59:08 +01:00
Federico Beffa ec00de358e gnu: Add numpydoc. 
* gnu/packages/python.scm (python-numpydoc, python2-numpydoc): New variables.
 2014-11-27 09:50:47 +01:00
Federico Beffa 15bfe6d635 gnu: Add pyparsing. 
* gnu/packages/python.scm (python-pyparsing, python2-pyparsing): New
  variables.
 2014-11-25 22:04:38 +01:00
Federico Beffa 0da9853360 gnu: Add numpy-bootstrap. 
* gnu/packages/python.scm (python-numpy-bootstrap, python2-numpy-bootstrap):
  New file-local variables.
 2014-11-24 22:22:20 +01:00
Andreas Enge 3c0f23290d gnu: python-wrapper: Propagate input python. 
* gnu/packages/python.scm (python-wrapper): Propagate input python, so that
    the python libraries are made available as well as the python3 binaries
    without the symbolic links.
 2014-11-04 13:40:32 +01:00
Federico Beffa 6888830b35 gnu: Add Cython. 
* gnu/packages/python.scm (cython, cython2): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-11-03 10:36:50 +01:00
Eric Bavier 35b9e4232c gnu: Some cleanup based on lint checkers. 
* gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm,
  gnu/packages/apr.scm, gnu/packages/avahi.scm, gnu/packages/backup.scm,
  gnu/packages/base.scm, gnu/packages/calcurse.scm, gnu/packages/cdrom.scm,
  gnu/packages/check.scm, gnu/packages/compression.scm, gnu/packages/cook.scm,
  gnu/packages/crypto.scm, gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
  gnu/packages/cyrus-sasl.scm, gnu/packages/databases.scm,
  gnu/packages/doxygen.scm, gnu/packages/dwm.scm, gnu/packages/elf.scm,
  gnu/packages/emacs.scm, gnu/packages/feh.scm, gnu/packages/file.scm,
  gnu/packages/fish.scm, gnu/packages/flex.scm, gnu/packages/fltk.scm,
  gnu/packages/fontutils.scm, gnu/packages/games.scm, gnu/packages/gcal.scm,
  gnu/packages/gcc.scm, gnu/packages/geeqie.scm, gnu/packages/ghostscript.scm,
  gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
  gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
  gnu/packages/gperf.scm, gnu/packages/grub.scm, gnu/packages/gsasl.scm,
  gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile.scm,
  gnu/packages/hurd.scm, gnu/packages/icu4c.scm, gnu/packages/image.scm,
  gnu/packages/imagemagick.scm, gnu/packages/irssi.scm, gnu/packages/kde.scm,
  gnu/packages/libdaemon.scm, gnu/packages/libevent.scm,
  gnu/packages/libidn.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm,
  gnu/packages/lout.scm, gnu/packages/lsh.scm, gnu/packages/lsof.scm,
  gnu/packages/lua.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm,
  gnu/packages/mp3.scm, gnu/packages/netpbm.scm, gnu/packages/noweb.scm,
  gnu/packages/ocaml.scm, gnu/packages/openssl.scm, gnu/packages/pcre.scm,
  gnu/packages/pdf.scm, gnu/packages/pkg-config.scm,
  gnu/packages/pretty-print.scm, gnu/packages/python.scm, gnu/packages/qt.scm,
  gnu/packages/rsync.scm, gnu/packages/scheme.scm, gnu/packages/scrot.scm,
  gnu/packages/sdl.scm, gnu/packages/skribilo.scm, gnu/packages/ssh.scm,
  gnu/packages/stalonetray.scm, gnu/packages/tcl.scm, gnu/packages/tcsh.scm,
  gnu/packages/telephony.scm, gnu/packages/texlive.scm, gnu/packages/tor.scm,
  gnu/packages/valgrind.scm, gnu/packages/version-control.scm,
  gnu/packages/vim.scm, gnu/packages/vpn.scm, gnu/packages/w3m.scm,
  gnu/packages/web.scm, gnu/packages/wordnet.scm, gnu/packages/xiph.scm,
  gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/packages/zile.scm,
  gnu/packages/zip.scm, gnu/packages/zsh.scm [synopsis, description]: Adjust
  according to lint checkers.
* gnu/packages/fltk.scm (fltk)[source]: Wrap long line in uri.
* /gnu/packages/xiph.scm (libogg, libtheora, vorbis-tools)[source]: Same.
 2014-10-26 13:03:53 -05:00
Andreas Enge 569ac04681 gnu: python2-pyicu: Update to 1.8. 
* gnu/packages/python.scm (python2-pyicu): Update to 1.8.
 2014-10-24 21:36:41 +02:00
Mark H Weaver b5b73a8269 Use #:prefix instead of #:renamer with 'symbol-prefix-proc'. 
* gnu/packages/abiword.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm,
  gnu/packages/backup.scm, gnu/packages/bittorrent.scm,
  gnu/packages/boost.scm, gnu/packages/compression.scm,
  gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
  gnu/packages/cyrus-sasl.scm, gnu/packages/dc.scm, gnu/packages/emacs.scm,
  gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/geeqie.scm,
  gnu/packages/ghostscript.scm, gnu/packages/gimp.scm,
  gnu/packages/gkrellm.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
  gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
  gnu/packages/gnutls.scm, gnu/packages/gnuzilla.scm, gnu/packages/gsasl.scm,
  gnu/packages/gtk.scm, gnu/packages/gv.scm, gnu/packages/image.scm,
  gnu/packages/indent.scm, gnu/packages/inkscape.scm,
  gnu/packages/lesstif.scm, gnu/packages/links.scm, gnu/packages/lisp.scm,
  gnu/packages/lsh.scm, gnu/packages/lsof.scm, gnu/packages/maths.scm,
  gnu/packages/mp3.scm, gnu/packages/openssl.scm, gnu/packages/ots.scm,
  gnu/packages/pciutils.scm, gnu/packages/pcre.scm, gnu/packages/pdf.scm,
  gnu/packages/pulseaudio.scm, gnu/packages/python.scm, gnu/packages/slim.scm,
  gnu/packages/ssh.scm, gnu/packages/texlive.scm, gnu/packages/vim.scm,
  gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wv.scm,
  gnu/packages/xiph.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm,
  gnu/packages/yasm.scm, gnu/packages/zip.scm,
  guix/build/cmake-build-system.scm, guix/build/perl-build-system.scm,
  guix/build/python-build-system.scm, guix/download.scm: Replaces uses of
  #:renamer and 'symbol-prefix-proc' with #:prefix.
 2014-09-23 18:52:29 -04:00
Ludovic Courtès 9e771e3bb6 gnu: Adjust synopses as recommended by 'guix lint'. 
Remove leading articles and trailing periods in package synopses.
 2014-09-13 15:50:30 +02:00
Ludovic Courtès 5f96f303eb gnu: Consolidate databases in (gnu packages databases). 
* gnu/packages/databases.scm: New file, with the contents of the
  following deleted files.
* gnu/packages/mysql.scm, gnu/packages/postgresql.scm,
  gnu/packages/recutils.scm, gnu/packages/sqlite.scm,
  gnu/packages/bdb.scm: Remove.
* gnu-system.am (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/apl.scm, gnu/packages/dc.scm, gnu/packages/games.scm,
  gnu/packages/gnunet.scm, gnu/packages/linux.scm, gnu/packages/mail.scm,
  gnu/packages/mpd.scm, gnu/packages/nvi.scm, gnu/packages/openldap.scm,
  gnu/packages/package-management.scm, gnu/packages/python.scm,
  gnu/packages/qt.scm, gnu/packages/rdf.scm,
  gnu/packages/version-control.scm: Adjust to new module name.
 2014-09-08 17:48:57 +02:00
David Thompson 9dd6078d3b gnu: Add python-sphinx. 
* gnu/packages/python.scm (python-sphinx, python2-sphinx): New variables.
 2014-09-05 23:31:20 -04:00
David Thompson fb35b7c088 gnu: Add python-pygments. 
* gnu/packages/python.scm (python-pygments, python2-pygments): New variables.
 2014-09-05 23:31:20 -04:00
David Thompson 3580ab8be2 gnu: Add python-docutils. 
* gnu/packages/python.scm (python-docutils, python2-docutils): New variables.
 2014-09-05 23:31:20 -04:00
David Thompson fe34f0d152 gnu: Add python-jinja2. 
* gnu/packages/python.scm (python-jinja2, python2-jinja2): New variables.
 2014-09-05 23:31:20 -04:00
David Thompson 8176d4d55b gnu: Add python-markupsafe. 
* gnu/packages/python.scm (python-markupsafe, python2-markupsafe): New
  variables.
 2014-09-05 23:31:20 -04:00
David Thompson 5731cae394 gnu: Add python-virtualenv. 
* gnu/packages/python.scm (python-virtualenv, python2-virtualenv): New
  variables.
 2014-09-05 23:31:20 -04:00
David Thompson ec5dbb5c30 gnu: Add python-itsdangerous. 
* gnu/packages/python.scm (python-itsdangerous, python2-itsdangerous): New
  variables.
 2014-09-05 23:31:20 -04:00
David Thompson 2cec1f6f56 gnu: Add python-oauthlib. 
* gnu/packages/python.scm (python-oauthlib, python2-oauthlib): New variables.
 2014-09-05 23:31:20 -04:00
David Thompson 6d45fef43e gnu: Add python-pyjwt. 
* gnu/packages/python.scm (python-pyjwt, python2-pyjwt): New variables.
 2014-09-05 23:31:20 -04:00