b7a46ed227
gnu: openblas: Fix build on i686.
...
* gnu/packages/patches/openblas-fix-tests-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/maths.scm (openblas)[native-inputs]: Add it.
[arguments]: Add phase to apply it on i686 systems only.
2018-06-20 16:02:04 +02:00
6969c4de44
Merge branch 'master' into staging
2018-06-18 15:29:38 +02:00
73d18915b5
gnu: OpenBLAS: Update to 0.3.0.
...
* gnu/packages/maths.scm (openblas): Update to 0.3.0.
2018-06-18 15:27:08 +02:00
f3a34b9de8
gnu: gsl: Update to 2.5.
...
* gnu/packages/maths.scm (gsl): Update to 2.5.
2018-06-17 01:40:14 +02:00
b5edc47912
gnu: flann: Fix builds with CMake >= 3.11.
...
* gnu/packages/patches/flann-cmake-3.11.patch: New file.
* gnu/packages/maths.scm (flann)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-12 15:23:34 +02:00
fc3c88ec9c
gnu: lapack-3.5: Delete package.
...
* gnu/packages/maths.scm (lapack-3.5): Delete package.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-06-07 23:23:40 +02:00
c0d7c1244a
Merge branch 'master' into core-updates
2018-05-29 21:20:47 -04:00
de658cc2f8
gnu: octave: Update to 4.4.0.
...
* gnu/packages/maths.scm (octave): Update to 4.4.0.
2018-05-29 18:20:37 -04:00
1640f16e78
Merge branch 'master' into core-updates
2018-05-27 01:26:09 -04:00
6df2a50ac4
gnu: openmpi: Update to 3.0.1.
...
* gnu/packages/mpi.scm (openmpi): Update to 3.0.1.
[arguments]: In 'remove-absolute' phase, adjust romio file name.
* gnu/packages/maths.scm (scalapack)[arguments]: Add
'set-test-environment' phase.
(slepc-openmpi)[arguments]: Likewise.
(mumps-openmpi)[arguments]: Likewise.
(superlu-dist)[arguments]: In 'check' phase, set
'OMPI_MCA_plm_rsh_agent'.
(scotch)[arguments]: In 'build-esmumps', likewise.
(p4est)[arguments]: Add 'set-test-environment' phase.
(hypre-openmpi)[arguments]: Likewise.
2018-05-25 13:43:03 +02:00
0921eff2a8
gnu: superlu-dist: Update to 5.3.0.
...
* gnu/packages/maths.scm (superlu-dist): Update to 5.3.0.
[source](snippet): Adapt file name and function names to new version.
Remove 'delete-file' call.
2018-05-25 13:43:03 +02:00
539bf8f2c0
Merge branch 'master' into core-updates
2018-05-17 01:00:50 -04:00
9a2ac95d76
gnu: r-desolve: Update to 1.21.
...
* gnu/packages/maths.scm (r-desolve): Update to 1.21.
2018-05-17 01:01:59 +02:00
e18e7cb9f4
gnu: hypre: Add missing dependency on Perl.
...
Previously the test suite would fail to run 'ppmquant', though it would
silently ignore it.
* gnu/packages/maths.scm (hypre)[native-inputs]: Add PERL.
2018-05-13 13:29:26 +02:00
4f38754180
gnu: arpack-ng-openmpi: Fix build.
...
* gnu/packages/maths.scm (arpack-ng-openmpi)[arguments]: Inherit
arguments from ARPACK-NG. Previously the 'configure' phase would fail
due to the lack of a 'configure' script.
2018-05-11 18:42:42 +02:00
12bd588346
Merge branch 'master' into core-updates
2018-05-06 15:56:24 +02:00
560acf2594
gnu: Add python-kiwisolver.
...
* gnu/packages/maths.scm (python-kiwisolver, python2-kiwisolver): New public
variables.
2018-05-05 13:16:32 +02:00
07254d8b22
gnu: gnuplot: Update to 5.2.2
...
* gnu/packages/maths.scm (gnuplot): Update to 5.2.2.
[arguments]: New field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-04 15:27:29 +02:00
3d5ad159b3
Merge branch 'master' into core-updates
2018-04-30 04:03:54 -04:00
e7323f4c08
gnu: mumps: Update to 5.1.2.
...
* gnu/packages/maths.scm (mumps): Update to 5.1.2.
2018-04-26 20:54:18 -05:00
d98e9009a9
gnu: scotch: Update to 6.0.5a.
...
* gnu/packages/patches/pt-scotch-build-parallelism.patch: Delete files.
* gnu/packages/patches/scotch-build-parallelism.patch,
gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/maths.scm (scotch): Update to 6.0.5a.
[source](patches): Adjust accordingly.
2018-04-26 20:54:18 -05:00
2bcf5fd337
gnu: r-subplex: Update to 1.5-4.
...
* gnu/packages/maths.scm (r-subplex): Update to 1.5-4.
2018-04-21 23:07:52 +02:00
f89aa1521a
Merge branch 'master' into core-updates
2018-04-10 00:42:22 -04:00
33d82486d5
gnu: vc: Do not optimize for the build machine CPU.
...
* gnu/packages/maths.scm (vc)[arguments]: Add "-DTARGET_ARCHITECTURE=none" to
#:configure-flags.
2018-04-08 22:32:24 +02:00
36ce25f092
gnu: Add qtoctave.
...
* gnu/packages/maths.scm (qtoctave): New variable.
2018-03-31 14:05:25 -04:00
ab5f3f2131
gnu: octave: Add audio and more sparse matrix support.
...
* gnu/packages/maths.scm (octave)[inputs]: Add suitesparse, libsndfile,
portaudio and alsa-lib.
2018-03-31 14:05:16 -04:00
5576cfabf3
Merge branch 'master' into core-updates
2018-03-29 17:34:41 +02:00
910deec66c
gnu: Add tcalc.
...
* gnu/packages/maths.scm (tcalc): New variables.
Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
2018-03-28 17:13:00 +02:00
1dc3109707
gnu: scotch: Use predictable source URI.
...
* gnu/packages/maths.scm (scotch)[source]: Use predictable URI.
2018-03-25 20:01:02 +02:00
7112b2f148
gnu: openlibm: Update to 0.5.5.
...
* gnu/packages/maths.scm (openlibm): Update to 0.5.5.
2018-03-25 20:01:00 +02:00
e0bee0de70
gnu: ceres-solver: Update to 1.14.0.
...
* gnu/packages/maths.scm (ceres-solver): Update to 1.14.0.
2018-03-25 00:36:32 +01:00
ac21be848a
Merge branch 'master' into core-updates
2018-03-20 14:22:06 -04:00
4a78fd4617
Correct name and Email for ng0.
...
* .mailmap: Correct name and Email for ng0.
* Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish
gnu/packages/accessibility.scm, gnu/packages/admin.scm,
gnu/packages/audio.scm, gnu/packages/autotools.scm,
gnu/packages/cdrom.scm, gnu/packages/check.scm,
gnu/packages/cinnamon.scm, gnu/packages/compression.scm,
gnu/packages/crypto.scm, gnu/packages/databases.scm,
gnu/packages/django.scm, gnu/packages/dns.scm,
gnu/packages/emacs.scm, gnu/packages/enlightenment.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm,
gnu/packages/forth.scm, gnu/packages/fvwm.scm,
gnu/packages/games.scm, gnu/packages/gl.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm,
gnu/packages/guile.scm, gnu/packages/haskell-check.scm,
gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm,
gnu/packages/image-viewers.scm, gnu/packages/image.scm,
gnu/packages/irc.scm, gnu/packages/language.scm,
gnu/packages/libcanberra.scm, gnu/packages/linux.scm,
gnu/packages/lisp.scm, gnu/packages/lolcode.scm,
gnu/packages/lxde.scm, gnu/packages/lxqt.scm,
gnu/packages/mail.scm, gnu/packages/markup.scm,
gnu/packages/mate.scm, gnu/packages/maths.scm,
gnu/packages/mc.scm, gnu/packages/messaging.scm,
gnu/packages/music.scm, gnu/packages/ncurses.scm,
gnu/packages/networking.scm, gnu/packages/nickle.scm,
gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl-check.scm, gnu/packages/perl.scm,
gnu/packages/python-crypto.scm, gnu/packages/python-web.scm,
gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/ruby.scm, gnu/packages/rust.scm,
gnu/packages/scheme.scm, gnu/packages/serialization.scm,
gnu/packages/shells.scm, gnu/packages/ssh.scm,
gnu/packages/suckless.scm, gnu/packages/tbb.scm,
gnu/packages/telephony.scm, gnu/packages/text-editors.scm,
gnu/packages/textutils.scm, gnu/packages/time.scm,
gnu/packages/tls.scm, gnu/packages/tor.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vim.scm, gnu/packages/web.scm,
gnu/packages/wm.scm, gnu/packages/xdisorg.scm,
gnu/packages/xfce.scm, gnu/packages/xml.scm,
gnu/packages/xorg.scm, gnu/services/certbot.scm,
gnu/services/desktop.scm, gnu/services/version-control.scm,
gnu/services/web.scm, guix/import/hackage.scm,
guix/licenses.scm: Likewise.
Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2018-03-20 17:17:58 +01:00
647888845c
Merge branch 'master' into core-updates
2018-03-20 00:49:05 -04:00
63e07468b3
gnu: Add ruby-asciimath.
...
* gnu/packages/maths.scm (ruby-asciimath): New variable.
2018-03-18 10:23:49 +00:00
9f388b1ee1
Merge branch 'master' into core-updates
2018-03-17 01:18:37 -04:00
6cbee49d66
gnu: All snippets report errors using exceptions, else return #t.
...
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm,
gnu/packages/bioinformatics.scm, gnu/packages/cdrom.scm,
gnu/packages/chez.scm, gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/cross-base.scm, gnu/packages/crypto.scm, gnu/packages/cups.scm,
gnu/packages/databases.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm,
gnu/packages/emulators.scm, gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm, gnu/packages/fpga.scm,
gnu/packages/freedesktop.scm, gnu/packages/ftp.scm, gnu/packages/games.scm,
gnu/packages/gcc.scm, gnu/packages/geo.scm, gnu/packages/ghostscript.scm,
gnu/packages/gl.scm, gnu/packages/glib.scm, gnu/packages/gnome.scm,
gnu/packages/gnuzilla.scm, gnu/packages/graphics.scm, gnu/packages/gtk.scm,
gnu/packages/guile.scm, gnu/packages/irc.scm, gnu/packages/java.scm,
gnu/packages/kerberos.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm,
gnu/packages/lxde.scm, gnu/packages/machine-learning.scm,
gnu/packages/mail.scm, gnu/packages/maths.scm, gnu/packages/messaging.scm,
gnu/packages/monitoring.scm, gnu/packages/mp3.scm, gnu/packages/music.scm,
gnu/packages/netpbm.scm, gnu/packages/networking.scm, gnu/packages/node.scm,
gnu/packages/nvi.scm, gnu/packages/ocaml.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/php.scm, gnu/packages/plotutils.scm,
gnu/packages/pretty-print.scm, gnu/packages/profiling.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python-crypto.scm,
gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/robotics.scm,
gnu/packages/sawfish.scm, gnu/packages/scanner.scm, gnu/packages/scheme.scm,
gnu/packages/scribus.scm, gnu/packages/sdl.scm,
gnu/packages/serialization.scm, gnu/packages/shells.scm,
gnu/packages/slang.scm, gnu/packages/smalltalk.scm, gnu/packages/ssh.scm,
gnu/packages/sync.scm, gnu/packages/syncthing.scm, gnu/packages/tbb.scm,
gnu/packages/terminals.scm, gnu/packages/texinfo.scm,
gnu/packages/text-editors.scm, gnu/packages/textutils.scm,
gnu/packages/tls.scm, gnu/packages/unrtf.scm,
gnu/packages/version-control.scm, gnu/packages/video.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wm.scm,
gnu/packages/wxwidgets.scm, gnu/packages/xdisorg.scm, gnu/packages/xorg.scm:
In all snippets, report errors using exceptions, or else return #t.
2018-03-16 09:08:31 -04:00
47653b3933
gnu: octave: Update to 4.2.2.
...
* gnu/packages/maths.scm (octave): Update to 4.2.2.
2018-03-15 19:11:15 +01:00
799ad71bfc
gnu: Add r-desolve.
...
* gnu/packages/maths.scm (r-desolve): New variable.
2018-03-15 10:57:51 -04:00
41835f947e
gnu: Add r-subplex.
...
gnu/packages/maths.scm (r-subplex): New variable.
2018-03-15 10:57:51 -04:00
c0edb5b543
gnu: arpack-ng: Update to 3.5.0; use 3.3.0 for julia.
...
Partly fixes <https://bugs.gnu.org/30282 >.
* gnu/packages/maths.scm (arpack-ng): Update to 3.5.0.
[native-inputs]: New field.
(arpack-ng-3.3.0): New variable.
* gnu/packages/julia.scm (julia)[inputs]: Use ARPACK-NG-3.3.0.
2018-03-12 16:09:24 +01:00
d8f46d5234
gnu: hdf5: Do not record the build-time kernel version.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Patch libhdf5.settings to prevent
the kernel version on the build node from affecting the output.
2018-03-09 11:20:22 +01:00
bd041e7fd3
gnu: dionysus: Update to 1.4.0.
...
* gnu/packages/maths.scm (dionysus): Update to 1.4.0.
2018-02-28 14:42:36 +02:00
0181df537f
gnu: wxmaxima: Update to 18.02.0.
...
* gnu/packages/maths.scm (wxmaxima): Update to 18.02.0.
[source]: Add patch.
[build-system]: Use the cmake-build-system.
[native-inputs]: Remove autoconf and automake.
[arguments]: Disable tests, remove 'autoconf' phase.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-24 18:05:52 -05:00
853b029209
gnu: vc: Update to 1.3.3.
...
* gnu/packages/maths.scm (vc): Update to 1.3.3.
2018-02-23 13:18:32 -05:00
a89e0cf581
gnu: lpsolve: Update to 5.5.2.5.
...
* gnu/packages/maths.scm (lpsolve): Update to 5.5.2.5.
2018-02-21 15:02:49 +01:00
6c96b5452c
gnu: lpsolve: Update phase style.
...
* gnu/packages/maths.scm (lpsolve)[arguments]: Use INVOKE and
INSTALL-FILE, and end phases with #t.
2018-02-21 15:02:48 +01:00
ff9d1a2f0c
Merge branch 'master' into core-updates
2018-02-18 00:39:25 +01:00
445929e038
gnu: glpk: Update to 4.65.
...
* gnu/packages/maths.scm (glpk): Update to 4.65.
2018-02-16 22:08:03 +01:00
288b8fd5e9
Merge branch 'master' into core-updates
2018-02-13 13:17:15 -05:00
Marius Bakke