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185 Commits (d4c65729e40140cd8bfcd499417a332faf147d35)

Author SHA1 Message Date
Shuhei Kadowaki 7c2eb23bcd small refactors (mostly about code styles) 2020-05-16 00:32:09 +09:00
Shuhei Kadowaki bc0f687352 rm header_args 2020-05-10 15:55:37 +09:00
Shuhei Kadowaki 2e19930565
Merge pull request #323 from JunoLab/avi/bang 
use bangs for destructive functions
 2020-05-10 14:28:40 +09:00
Shuhei Kadowaki d809ddf703
Merge pull request #322 from JunoLab/avi/require 
don't load Weave Plots submodules into user's module
 2020-05-10 14:06:09 +09:00
Shuhei Kadowaki e459bfb87d use bangs for destructive functions 2020-05-10 13:56:09 +09:00
Shuhei Kadowaki ede31bcf74 don't load Weave Plots submodules into user's module 2020-05-10 13:35:54 +09:00
Shuhei Kadowaki e89d5da250 rm unncessary `Symbol` spec: 
- change `informat` and `doctype` options to 
`Union{NothingAbstractString}`
 2020-05-10 13:20:44 +09:00
Shuhei Kadowaki c825076e36 simplify imports 2020-05-10 00:01:41 +09:00
Shuhei Kadowaki 4dae2a0816 `WEAVE_OPTION_NAME` 2020-05-09 22:42:05 +09:00
Shuhei Kadowaki 36bdd4f82b remove weird default constructor for `WeaveDoc` 2020-05-09 22:33:58 +09:00
Shuhei Kadowaki 5f7cf529b9 chunks.jl -> types.jl 2020-05-09 21:03:00 +09:00
Shuhei Kadowaki 750b7624e0 refactor readers.jl: 
- avoid unnecessary overloading on `parse_doc`
- split readers.jl into multiple scripts
 2020-05-09 20:17:53 +09:00
Shuhei Kadowaki d4413a1d78 clear sandbox module correctly 2020-05-09 16:09:11 +09:00
Shuhei Kadowaki 5dbe54316b isnothing utility 2020-05-09 11:26:32 +09:00
Shuhei Kadowaki e41202d3ff no weird Base.run overload 2020-05-09 11:25:19 +09:00
Shuhei Kadowaki 2376a9dae9 format things 2020-05-08 23:39:17 +09:00
Shuhei Kadowaki 020b4353a4 fix indents, Github -> GitHub 2020-05-06 23:37:04 +09:00
Fredrik Bagge Carlson f126e1c7a9 fix formatting 2020-04-17 12:16:56 +08:00
Fredrik Bagge Carlson 7e88052db3 keep latex figures 2020-04-17 12:16:56 +08:00
Shuhei Kadowaki d40e21ea35 improve documentations around notebooks 2020-03-27 20:43:33 +09:00
Shuhei Kadowaki 840f1b3b8f simpler doc APIs 2020-03-27 18:45:04 +09:00
Shuhei Kadowaki efccb5c7f1 more documentation improve 2020-03-27 10:16:57 +09:00
Shuhei Kadowaki 9e9fe45231 improve documentations 2020-03-26 21:41:54 +09:00
Shuhei Kadowaki f8c32c865b more type annotate APIs 2020-03-26 17:35:05 +09:00
Shuhei Kadowaki 6339303569 rm Compat 2020-03-18 08:53:25 +09:00
Shuhei Kadowaki 1f8514a737 fixes: #105, #288 
closes: #289
 2020-03-17 10:57:36 +09:00
Shuhei Kadowaki d8595e266f more doc fixes 2020-03-06 10:14:21 +09:00
Sebastian Pech c9e26d5638 Rename escape_unicode and move to tex based formatdicts 2019-10-15 21:48:05 +02:00
Sebastian Pech da66a8f272 Add escape_unicode to docstring 2019-10-15 14:20:11 +02:00
Sebastian Pech bd5ff7031c Add argument for disabling unicode escaping 2019-09-05 10:13:49 +02:00
Sebastian Pfitzner 9f664ba5a6
Merge pull request #202 from tshort/hook-fix 
Fix hooks and add a push/pop hook to the test
 2019-06-25 18:10:38 +02:00
Arnav Sood 5d3e05511e allow configuration of jupyter command while weaving notebooks, fixes #194 
* notebook refactor and tests

* update PR

* add jupyter test jmd

* add back full warnings and remove debugging output

* Update test filename [ci skip]

* Conda for CI

* update for CI?

* remove Conda, IJulia, and tests for now

* Project.toml changes suggested by tinagly

* revive travis tests

* comment out nb tests
 2019-06-19 10:26:13 -07:00
tshort bd69ef1f59 Fix hooks and add a push/pop hook to the test 2019-04-27 13:17:29 -04:00
Matti Pastell 99db6a9406 Actually fix include_weave 2019-03-11 14:25:17 +02:00
Matti Pastell 8194c8a1b8 Fix `include_weave`. Closes #152. 2019-03-11 14:05:06 +02:00
Matti Pastell 35addd2b50 Fixes to option parsing, gadfly pdf, stripping header, add tests 2019-03-11 10:23:31 +02:00
Matti Pastell 4ab1c09b8c Allow using MustacheTokens as template directly 2019-03-10 17:51:19 +02:00
Matti Pastell 4e70d32901 Don't run latex on travis 2019-03-05 20:18:58 +02:00
Matti Pastell 6082786f92 Allow setting document options in YAML header 2019-03-05 19:36:27 +02:00
Matti Pastell 52f3a23d28 Allow format specific options in header 2019-03-05 16:44:10 +02:00
Matti Pastell e9ea54bc1b Allow setting options in document header. Closes #189 2019-03-04 11:10:02 +02:00
Matti Pastell a14b7a8f80 Return weaved file path from weave function. Closes #190 2019-03-04 09:45:30 +02:00
Matti Pastell edd558de0e Add support for comments in Markdown. Closes #97 2019-02-28 16:17:03 +02:00
Matti Pastell 710b67ca45 Add markdown flavor for improved math support. Closes #182 2019-02-27 18:21:05 +02:00
Matti Pastell cb791e8b69 Fix notebook support. Closes #173 2019-02-25 19:46:25 +02:00
Christopher Rackauckas 73f0e1e998 Remove precompile statement (#177) 2019-02-25 19:29:02 +02:00
schrimpf adf7338f34 Allow errors (#174) 
* Added ability to pass aditional options to nbconvert. Main purpose is
to pass "--allow-errors"

* Changed IJulia.jupyter to IJulia.JUPYPTER to match change in IJulia.jl
 2019-02-25 19:24:01 +02:00
Tamas Nagy caf64b2407 [WIP] Add Gadfly support back (#163) 
* add back gadfly support

* fix svg embed encoding
 2019-02-07 19:28:06 +02:00
Matti Pastell 246f7eef62 Remove tmp directories from md2pdf output, closes #140 2018-08-17 13:12:37 +03:00
Matti Pastell 4cd0b92792 Fix pandoc support, add raw options to pandoc requires pandoc 2. Closes #132. 2018-07-27 14:18:33 +03:00
Matti Pastell bd5e1d9a3b Eval requires in Main, add WeavePlots module 2018-07-26 21:29:46 +03:00
Matti Pastell 160017b6e8 Remove plot library hack and use Requires instead 2018-07-26 20:32:10 +03:00
Matti Pastell 93bb9ced2d Fix occursin bugs 2018-07-26 11:35:17 +03:00
Matti Pastell f90547cee6 Fix bug in Sandboxing, run code in sandbox module by default 2018-07-26 02:01:10 +03:00
Matti Pastell 373f5e9d37 Allow choosing where to eval code. 2018-07-25 23:24:25 +03:00
Matti Pastell 83c506252d Fix formatting deprecations 2018-07-23 19:29:07 +02:00
femtocleaner[bot] f04b67f69b Fix deprecations (#135) 
* Fix deprecations

* Fix html output
 2018-07-23 13:37:25 +03:00
Tom Short 5e1d8c1976 Fix a glitch with `pop_preexecute_hook` (#124) 2018-03-17 12:14:33 +02:00
Matti Pastell 53c2a337f3 Use IJulia jupyter. Closes #122 2018-02-27 15:08:08 +02:00
Matti Pastell 1341aed3d0 Precompile 2018-01-07 20:36:46 +02:00
Matti Pastell eead8f24a8
Added error handling with html display (#117) 
* Implemented error handling and initial html display

* Improved html display and tests for error handling
 2018-01-07 11:53:07 +02:00
Matti Pastell 51ea08ca88 Remove nbconvert timeout by default 2018-01-05 18:01:16 +02:00
Matti Pastell 048b484d83 Fix notebook doc string 2018-01-05 17:51:30 +02:00
Matti Pastell 57c17e05a3 Add notebook function for converting output to Jupyter notebooks 2018-01-05 17:42:47 +02:00
Matti Pastell dc566fc69a Fix md2pdf output -> use minted and xelatex 2018-01-03 17:23:57 +02:00
Matti Pastell 5c83309aa3 Fix Gadfly and Plots, use Compat.invokelatest 2017-05-12 16:12:05 +03:00
Matti Pastell 9d4817007e Fix world-age for display 2017-03-14 21:06:47 +02:00
Matti Pastell c788f5f15e Fix PyPlot for 0.6 2017-03-09 22:09:36 +02:00
Matti Pastell de1e08e1ef Add exception handling to weave 2016-12-27 22:22:32 +02:00
Matti Pastell 3da8865a15 Export include_weave 2016-12-26 13:45:33 +02:00
Matti Pastell 7c5fcd24c6 Pass data to documents #78 2016-12-26 13:26:36 +02:00
Matti Pastell 4d499da343 Embed images for html at runtime and cache result 2016-12-23 12:02:28 +02:00
Matti Pastell d75ae6d86b Fix cache_path and don't clean figures when caching. 
Fixes #76
 2016-12-23 10:25:23 +02:00
Matti Pastell ff79618182 Clean build artefacts for pandoc2* closes #69 2016-12-23 09:37:30 +02:00
Matti Pastell c0f3bac70a Clean extra files for pdf output #69 2016-12-23 09:25:44 +02:00
Matti Pastell 89859c0898 Rename weave_include to include_weave 2016-12-23 08:36:07 +02:00
Matti Pastell b14cd13063 Clean extra files for html output #69 2016-12-23 08:34:54 +02:00
Matti Pastell 0234b3d059 Added weave_include function to include code from Weave documents 2016-12-20 20:34:24 +02:00
Matti Pastell 82cc021f3c Update docs 2016-12-17 00:16:40 +02:00
Matti Pastell e3051a7525 Several fixes to tex formatter and template 2016-12-16 20:24:41 +02:00
Matti Pastell 8a6aac0129 Make md2pdf use Julia markdown 2016-12-15 21:28:29 +02:00
Matti Pastell a6b74156f6 Precompile 2016-12-15 19:54:50 +02:00
Matti Pastell b2932f1b86 Add template, highlight_theme and css options to weave 2016-12-15 15:49:21 +02:00
Matti Pastell d683625444 Make julia Markdown the default when converting to html, Fix term chunks 2016-12-13 14:20:40 +02:00
Matti Pastell f0bcaf546a Initial implementation of pure julia markdown2html formatter 2016-12-13 13:26:34 +02:00
Matti Pastell 6a68be5161 Updated docs, added convert_doc 2016-12-12 14:05:26 +02:00
Matti Pastell 15157a213a Add converters between supported input formats #48 2016-12-12 12:53:10 +02:00
Matti Pastell 6b87fbeb90 Remove Winston from test depencies 2016-11-03 12:33:30 +02:00
Matti Pastell 56e92c648c Remove compat macros 2016-11-03 10:41:29 +02:00
Matti Pastell 699f5b46e7 Move plotlib_set flag to rcParams 2016-04-29 16:56:05 +03:00
Matti Pastell 30a83667ee Add autodetection of plotting library, and pre and post chunk hooks, prehook for setting plot size with plots.jl 2016-04-29 16:41:18 +03:00
Matti Pastell 31392a067f Displaying and collecting rich results implemented 2016-04-27 17:14:42 +03:00
Matti Pastell da5001bd31 Set mimetypes based on document format, started work on capturing 'rich' text results 2016-04-27 16:05:11 +03:00
Matti Pastell 37f0c7f796 Added more general display methods for png and svg, gadfly modified to catch svg's 2016-04-27 14:51:15 +03:00
= 13670b1620 Allow out_path to be file or directory 2016-04-24 15:02:03 +03:00
Matti Pastell 8292c17674 Implement autodetecting output format 2016-04-22 16:16:12 +03:00
Matti Pastell 42faaae5de Detect informat based on file extension 2016-04-22 15:39:25 +03:00
Matti Pastell 0c847f2378 Added tangle option to code chunks, closes #33 2016-04-22 09:26:27 +03:00
Matti Pastell f62a315dc0 Fixes Winston support, some tests now work on 0.5 2016-04-20 20:23:00 +03:00
Matti Pastell 65a10335a3 Added md2pdf format 2016-04-20 18:36:26 +03:00