'package-grafts' returns a list of potentially applicable grafts, which
'cumulative-grafts' then narrows by looking at store item references and
determining the subset of the grafts that's actually applicable.
Until now, 'package-grafts' would traverse native inputs and would thus
return a large superset of the applicable grafts, since native inputs
are not in the reference graph by definition. This patch fixes that by
having 'package-grafts' ignore entirely native inputs from the
dependency graph.
* guix/packages.scm (fold-bag-dependencies)[bag-direct-inputs*]: Add
special case for libc.
* guix/packages.scm (bag-grafts)[native-grafts, target-grafts]: Remove.
[grafts]: New procedure.
Use it.
* tests/packages.scm ("package-grafts, grafts of native inputs
ignored"): New test.
Previously recursive calls to 'loop' would always consider all the bag
inputs rather than those corresponding to NATIVE?.
* guix/packages.scm (fold-bag-dependencies)[bag-direct-inputs*]: New
procedure. Use it both in the 'match' expression and in its body.
This is a followup to 2815fca142.
* guix/profiles.scm (profile-derivation)[builder]: Remove
'debug-disable' call, which was ineffective.
Pass #:env-vars to 'gexp->derivation'.
This fixes a regression introduced in
2f60084f77, whereby the profile derivation
would fail to run on Guile 2.0 (as is the case with "guix package
--bootstrap").
Reported by Christopher Baines.
* guix/profiles.scm (profile-derivation)[builder]: Use _IO* but add
'debug-disable' call.
Previously the "manual-database" derivation would always import the
host's srfi-{19,26}.scm files in the build side. In practice this means
that different users could get different manual-database.drv depending
on the Guile version they're using in the host.
For example, the (gnu tests install) tests would fail if the host was
running Guile 2.2.3 because the guest is running 2.2.2, and thus has
different srfi-{19,26}.scm files. The manual-database.drv would need to
be built from source, which would fail because prerequisites were
missing.
Reported by Mathieu Othacehe <m.othacehe@gmail.com>
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=29409#96>.
* guix/profiles.scm (manual-database): Do not pass #:modules to
'gexp->derivation'. Wrap 'build' gexp in 'with-imported-modules' form.
* guix/scripts/offload.scm (build-machines): Comment out
'(set! %fresh-auto-compile #t)' since with Guile 2.2.3 it could lead to
an actual rebuild of everything that gets loaded from there on. See
<https://bugs.gnu.org/29226>.
* guix/ui.scm (load*): Likewise.
Until now it would print the name of each store item being copied, which
was verbose and unhelpful.
* guix/scripts/system.scm (copy-closure): Use 'progress-reporter/bar'
and 'call-with-progress-reporter'.
(guix-system): Parameterize 'current-terminal-columns'.
* guix/scripts/system.scm (copy-item): Add 'references' argument and
remove 'references*' call. Turn into a non-monadic procedure.
(copy-closure): Remove initial call to 'references*'. Only pass ITEM to
'topologically-sorted*' since that's equivalent. Compute the list of
references corresponding to TO-COPY and pass it to 'copy-item'.
Previously things returned by 'program-file', such as %MODPROBE-WRAPPER
in (gnu services), would refer to 'guile-final'. This would introduce
'guile-final' in the system closure, which is otherwise absent. By
referring to 'guile-2.2' we remove that extra Guile.
* guix/gexp.scm (default-guile): Refer to GUILE-2.2 instead of
GUILE-FINAL.
This avoids repeated deprecation messages, particularly while running
'guix system build' or similar.
* guix/gexp.scm (gexp->derivation): Add #:deprecation-warnings. Pass it
to 'compiled-modules'.
(compiled-modules): Add #:deprecation-warnings and honor it.
* doc/guix.texi (G-Expressions): Update 'gexp->derivation'
documentation.
* guix/packages.scm (patch-and-repack): Pass #:deprecation-warnings #t.
Reported at <https://bugs.gnu.org/27943>
by Danny Milosavljevic <dannym@scratchpost.org>.
* guix/scripts/lint.scm (%distro-directory): New variable.
(check-patch-file-names): Add check for the file name length.
* tests/lint.scm ("patches: file name too long"): New test.
Fixes <https://bugs.gnu.org/25020>.
Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>.
* guix/gnu-maintenance.scm (latest-ftp-release)[contains-digit?]: Remove.
Relax test as to whether to recurse into subdirectories.
Fixes <https://bugs.gnu.org/29358>.
Reported by Marius Bakke <mbakke@fastmail.com>.
* guix/ui.scm (known-variable-definition): Add 'visited' set to guard
against cycles on 2.0.
This reverts commit 5f93d97005.
'guix pull' would fail because (guix self) needs 'scheme-files'
from (guix discovery), which was not exported until now.
This mitigates <https://bugs.gnu.org/27284>.
* guix/self.scm: New file.
* Makefile.am (MODULES): Add it.
* build-aux/build-self.scm (libgcrypt, zlib, gzip, bzip2, xz)
(false-if-wrong-guile, package-for-current-guile, guile-json)
(guile-ssh, guile-git, guile-bytestructures): Remove.
(build): Rewrite to simply delegate to 'compiled-guix'.
* gnu/packages.scm (%distro-root-directory): Rewrite to try different
directories.
* guix/discovery.scm (guix): Export 'scheme-files'.
* guix/scripts/pull.scm (build-and-install): Split into...
(install-latest): ... this. New procedure. And...
(build-and-install): ... this, which now takes a monadic value argument.
(indirect-root-added): Remove.
(guix-pull): Call 'add-indirect-root'. Call 'build-from-source' and
pass the result to 'build-and-install'.
This makes 'latest-repository-commit' significantly more efficient and
reduces disk usage in the store.
* guix/git.scm (copy-to-store)[dot-git?]: New procedure.
Pass it as the #:select? argument to 'add-to-store'.
Fixes <https://bugs.gnu.org/29335>.
* guix/zlib.scm (close-procedure): Remove.
(make-gzip-input-port): Do (dup (fileno port)) to get a file descriptor
for 'gzdopen'. Close PORT before returning. Use 'gzclose' as the
'close' procedure of the returned port.
(make-gzip-output-port): Likewise.
* guix/workers.scm (worker-thunk): Add (const #f) as the 'catch'
handler, and move previous handler as pre-unwind handler. Protect
against 'make-stack' returning #f.
Fixes <https://bugs.gnu.org/28779>.
Reported by Eric Bavier <bavier@cray.com>.
* guix/workers.scm (<pool>)[busy]: New field.
(worker-thunk): Add #:idle and #:busy and use them.
(make-pool): Pass #:busy and #:idle to 'worker-thunk'. Pass a 'busy'
value to '%make-pool'.
* guix/workers.scm (pool-idle?): Check whether 'pool-busy' returns zero
and adjust docstring.
That way CVE fetching benefits from 'If-Modified-Since' handling.
* guix/http-client.scm (http-fetch/cached): Add #:write-cache and
#:cache-miss parameters and honor them.
* guix/cve.scm (%current-year-ttl, %past-year-ttl): Reduce.
(call-with-cve-port): Remove.
(write-cache): New procedure.
(fetch-vulnerabilities): Rewrite in terms of 'http-fetch/cached'.
This is another instance of <https://bugs.gnu.org/22966>.
The Microsoft-IIS/7.5 server at static.nvd.nist.gov would sometimes hang
when receiving our requests byte by byte.
* guix/build/download.scm (tls-wrap) [!guile-2.0]: Add 'setvbuf' call.
This ensures the timeout applies when connecting to the port returned by
PASV.
* guix/ftp-client.scm (ftp-list): Add #:timeout parameter. Use
'connect*' instead of 'connect' and pass TIMEOUT.
(ftp-retr): Likewise.
* guix/build/download.scm (ftp-fetch): Pass TIMEOUT to 'ftp-retr'.
Suggested by Dave Love <fx@gnu.org>.
* guix/build-system/gnu.scm (%license-file-regexp): New variable.
(gnu-build): Add #:license-file-regexp and use it.
(gnu-cross-build): Likewise.
* guix/build/gnu-build-system.scm (%license-file-regexp): New variable.
(install-license-files): New procedure.
(%standard-phases): Add it.
* guix/build-system/r.scm (bioconductor-uri): Also return the archive URL.
* guix/import/cran.scm (latest-bioconductor-release, fetch-description):
Adjust because bioconductor-uri now returns a list.
* guix/import/cran.scm (%bioconductor-version,
%bioconductor-packages-list-url): New variables.
(bioconductor-packages-list, latest-bioconductor-package-version): New
procedures.
Suggested by Marius Bakke <mbakke@fastmail.com>
in <https://bugs.gnu.org/29177>.
* guix/scripts/refresh.scm (all-packages): Pass #:select? to
'fold-packages'.
Fixes <https://bugs.gnu.org/29091>.
Reported by Eric Bavier <bavier@cray.com>.
* guix/build/compile.scm (relative-file): New procedure.
(load-files): Use it before calling 'file-name->module-name'.
(compile-files): Likewise before calling 'scm->go'.
* guix/build/pull.scm (build-guix): Remove 'with-directory-excursion'
and file name hack from ce33c3af76.
Pass OUT to 'all-scheme-files'.
* guix/download.scm (%mirrors)[cpan]: Update the list of CPAN mirrors (of
which several are dead) with a more-or-less geographically diverse selection.
This is most often the need for perl module dependencies.
* guix/import/cpan.scm (cpan-module->sexp): 'inputs -> 'propagated-inputs.
* tests/cpan.scm ("cpan->guix-package"): Adjust accordingly.
* guix/import/elpa.scm (elpa-fetch-archive): Use 'http-fetch/cached'
directly instead of 'call-with-downloaded-file'. This ensures we don't
just abort when networking access is lacking, which is required to allow
'guix refresh -c refresh' to proceed.
* guix/scripts/lint.scm (call-with-networking-fail-safe): New procedure.
(with-networking-fail-safe): New macro.
(current-vulnerabilities*): Rewrite in terms of 'with-networking-fail-safe'.
* guix/scripts/challenge.scm (summarize-report-list): New procedure.
(guix-challenge): Use it.
* doc/guix.texi (Invoking guix challenge): Adjust command output in
example.
Fixes <https://bugs.gnu.org/28731>.
Reported by Jan Nieuwenhuizen <janneke@gnu.org>.
* guix/scripts/substitute.scm (at-most): New procedure.
(http-multiple-get): Use it to send at most 1000 requests at once.
Fixes <https://bugs.gnu.org/28956>.
Reported by Leo Famulari <leo@famulari.name>.
* build-aux/build-self.scm (build): Add (guix build compile) to
#:modules.
* guix/build/pull.scm (build-guix): Wrap 'compile-files' call in
'with-directory-excursion'. Strip "./" from FILES when passing it to
'compile-files'.
Among other things, this removes (guix utils), (guix ui), (guix config),
etc. from the closure of (guix build download), as was the case since
798648515b.
* guix/utils.scm (<progress-reporter>, call-with-progress-reporter):
Move to...
* guix/progress.scm: ... here. New file.
* Makefile.am (MODULES): Add it.
* guix/build/download.scm (current-terminal-columns)
(nearest-exact-integer, duration->seconds, seconds->string)
(byte-count->string, progress-bar, string-pad-middle)
(rate-limited, progress-reporter/file, dump-port*)
(time-monotonic): Move to progress.scm.
* guix/scripts/download.scm: Adjust accordingly.
* guix/scripts/substitute.scm: Likewise.
* guix/build/download.scm (http-fetch): Remove 'file' parameter. Change
to return an input port and the content-length. Make public.
(url-fetch): Adjust accordingly.
This is a followup to 36626c556e.
* guix/build/download.scm (http-fetch): Rename 'port-or-bv' to 'port'.
Assume (port? port) is always true, and remove other branch.
Fixes <https://bugs.gnu.org/28756>.
* guix/utils.scm (filtered-port): Close the 'input' port for the current
process, and close it upon exit in the child process.
* guix/scripts/substitute.scm (progress-substitution): Display "\n\n" after
the reporter has finished.
Previously the regex would match from /bin/ to a closing quote. However, this
is greedy, so will match up until the last ". This causes problems when there
are several quotes on the same line, for example:
org-effectiveness.el:
196: (call-process "/bin/bash" nil t nil "-c" strplot)
Therefore, change . to \S so that it doesn't include whitespace
characters. Changing to a lazy quantifier would be an option, if that were
supported.
* guix/build/emacs-build-system.scm (patch-el-files): Change the regular
expression used.
Previously the string-append here would error, which isn't useful as it
doesn't tell you which command couldn't be found. To make the error
actionable, catch it earlier, and explicitly error.
* guix/build/emacs-build-system.scm (patch-el-files): Handle (which cmd)
returning #f.
Previously we would call 'machine-load' once per machine, which was very
costly when there were many machines. Now we arrange to call it only
once on average (when all the machines have the same 'speed' value).
* guix/scripts/offload.scm (random-seed, shuffle): New procedures.
(choose-build-machine)[machines+slots+loads]: Rename to...
[machines+slots]: ... this. Remove load from the tuples therein.
[undecorate]: Adjust accordingly.
[machine-less-loaded-or-faster?]: Remove.
[machine-faster?]: New procedure.
Sort MACHINES+SLOTS according to 'machine-faster?'. Call
'machine-load?' as the last thing.
Fixes <https://bugs.gnu.org/28784>.
This mostly reverts 81a0f1cdf1, which
introduced a regression: revealed ports are *never* GC'd (contrary to
what Guile's manual suggests).
In addition to the revert, 'close-procedure' now explicitly swallows
EBADF errors when 'close-port' is called.
* guix/zlib.scm (close-procedure): New procedure.
(make-gzip-input-port)[gzfile]: Use 'fileno' instead of 'port->fdes'.
Use 'close-procedure' instead of 'gzclose'.
(make-gzip-output-port): Likewise.
* tests/zlib.scm ("compression/decompression pipe"): Use 'port-closed?'
to determine whether PARENT has been closed.
* guix/import/cpan.scm: Remove dependency on (gnu packages perl).
(perl-package): New procedure.
(%corelist, core-module?): Use it instead of referring to 'perl'.
Suggested by Ricardo Wurmus.
Works around <https://bugs.gnu.org/28295>.
* guix/ui.scm (report-load-error): Add case for 'read-error'.
* tests/guix-system.sh: Test missing-closing-paren errors.
* guix/scripts/lint.scm (check-for-updates): New procedure.
(%checkers): Add it.
* guix/scripts/refresh.scm (importer-modules, %updaters): Move
from here ...
* guix/upstream.scm: ... to here.
Fixes <https://bugs.gnu.org/28664>.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.
* guix/scripts/publish.scm (bake-narinfo+nar): When COMPRESSION is
'none, write NAR instead of doing nothing.
(make-request-handler): Use 'render-nar/cached' for /nar URLs with no
compression.
* tests/publish.scm ("with cache", "with cache, uncompressed"): Adjust
expected result accordingly.
* guix/build-system/ant.scm: Add #:test-include and #:test-exclude
arguments.
* guix/build/ant-build-system.scm: Generate test list from arguments.
* doc/guix.texi (Build Systems): Document it.
* guix/build-system/ant.scm: New #:main-class argument
* guix/build/ant-build-system.scm: Generate a manifest file with
additional properties.
* doc/guix.texi (Build Systems): Document it.
This is a follow-up to commit fb1db38547.
* guix/scripts/build.scm (lazy-util): Remove procedure.
(options->things-to-build): Remove special case for files with ".json"
extension.
* guix/utils.scm (<progress-reporter>): New record type.
(call-with-progress-reporter): New procedure.
* guix/build/download.scm (dump-port*, rate-limited, progress-reporter/file):
New procedures.
(ftp-fetch, http-fetch): Use 'dump-port*'.
(progress-proc): Remove procedure.
* guix/scripts/substitute.scm (progress-report-port): Rewrite in terms of
<progress-reporter>.
(process-substitution): Adjust accordingly.
* guix/http-client.scm (http-fetch/cached)[update-cache]: Add
'cache-port' parameter. Check its mtime and compute 'if-modified-since'
header accordingly. Guard 'http-get-error?' and honor 304.
Adjust callers of 'update-cache'.
* guix/gnu-maintenance.scm (ftp.gnu.org-files): Set #:ttl to 15m.
The perl-license definition is intended to avoid circular dependencies, so
use this as a default when importing packages from CPAN.
* guix/import/cpan.scm (string->license): Replace '(package-license perl) with
'perl-license.
* guix/gnu-maintenance.scm (latest-gnu-release): Return a list of
matching tarballs instead of just the first one. This gives us .tar.gz,
.tar.xz, etc.
* guix/gnu-maintenance.scm (latest-gnu-release): Add calls to
'sans-extension'. This fixes version comparison, which could be fooled
with the ".tar.gz" extension.
This allows substitutes to be downloaded from unauthorized servers, as
long as they advertise the same hash and references as one of the
authorized servers.
* guix/scripts/substitute.scm (assert-valid-narinfo): Remove.
(valid-narinfo?): Add #:verbose?. Handle each case of
'signature-case'.
(equivalent-narinfo?): New procedure.
(lookup-narinfos/diverse): Add 'authorized?' parameter and honor it.
[select-hit]: New procedure.
(lookup-narinfo): Add 'authorized?' parameter and pass it.
(process-query): Adjust callers accordingly.
(process-substitution): Remove call to 'assert-valid-narinfo'. Check
whether 'lookup-narinfo' returns true and call 'leave' if not.
* tests/substitute.scm (%main-substitute-directory)
(%alternate-substitute-directory): New variables.
(call-with-narinfo): Make 'narinfo-directory' a parameter. Call
'mkdir-p' to create it. Change unwind handler to check whether
CACHE-DIRECTORY exists before deleting it.
(with-narinfo*): New macro.
("substitute, no signature")
("substitute, invalid hash")
("substitute, unauthorized key"): Change expected error message to "no
valid substitute".
("substitute, unauthorized narinfo comes first")
("substitute, unsigned narinfo comes first")
("substitute, first narinfo is unsigned and has wrong hash")
("substitute, first narinfo is unsigned and has wrong refs")
("substitute, unsigned narinfo comes first")
("substitute, two invalid narinfos"): New tests.
* doc/guix.texi (Substitutes): Explain the new behavior.
* guix/scripts/substitute.scm (%cache-urls): Rename to...
(%default-substitute-urls): ... this.
(substitute-urls): New variable.
(guix-substitute): Use it instead of %CACHE-URLS.
* tests/substitute.scm: Likewise.
* guix/build/download.scm (http-fetch): Complete the hard-coded list of HTTP
redirection status codes.
* guix/http-client.scm (http-fetch): Likewise.
* guix/scripts/lint.scm (probe-uri): Likewise.
When current-processor-count is used without (ice-9 threads) being used, Guile
complains with the following warning:
Import (ice-9 threads) to have access to `current-processor-count'.
* guix/build/utils.scm: Use (ice-9 threads).
When current-processor-count is used without (ice-9 threads) being used, Guile
complains with the following warning:
Import (ice-9 threads) to have access to `current-processor-count'.
* guix/store.scm: Use (ice-9 threads).
Partly fixes <https://bugs.gnu.org/28159>.
Suggested by Hartmut Goebel <h.goebel@crazy-compilers.com>.
* guix/gnu-maintenance.scm (%gnu-file-list-uri): New variable.
(ftp.gnu.org-files, latest-gnu-release): New procedures.
(%gnu-updater)[pred]: Change to GNU-HOSTED?.
[latest]: Change to LATEST-GNU-RELEASE.
(%gnu-ftp-updater): New variable.
Previously (mlambda () (define foo 2) bar) would trigger a syntax error.
* guix/memoization.scm (%mlambda): In the zero-argument case, move
BODY... to a lambda to allow for inner 'define' and such.
Detecting when no files were installed was broken when switching to use
cond. Test with (not (null? ...)) to fix this.
* guix/build/emacs-build-system.scm (install): Fix detecting when no files
were installed.
Modify the install phase to detect when nothing has been installed, and error
if this happens. This is preferable to continuing, and allowing the next phase
to fail.
Also, when nothing can be found to be installed, print out each file that was
considered, along with the regular expressions that were used to include and
exclude it.
* gnu/build/emacs-build-system.scm (install-file?): Add additional error
checking and logging.
Fixes <http://bugs.gnu.org/27157>.
Having a finite default `max-silent-time' value for scripts such as 'guix
environment' could lead to timeouts when building subtitutes; this was
undesirable.
This change also fixes client behavior to match the documentation, which
is that by default the daemon's settings are honored.
* guix/scripts/archive.scm (%default-options): Remove max-silent-time entry.
* guix/scripts/copy.scm (%default-options): Likewise.
* guix/scripts/environment.scm (%default-options): Likewise.
* guix/scripts/pack.scm (%default-options): Likewise.
* guix/scripts/package.scm (%default-options): Likewise.
* guix/scripts/pull.scm (%default-options): Likewise.
* guix/scripts/system.scm (%default-options): Likewise.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
This is a followup to 05ceb8dcaf.
* guix/download.scm (in-band-download): Remove.
(url-fetch): Call 'error' when BUILTINS lacks "download"; remove call to
'in-band-download'.
* guix/download.scm (%mirrors)[sourceforge]: Remove
nbtelecom.dl.sourceforge.net, which never returns 404 responses. This causes
download failures due to hash mismatch, effectively preventing secondary
source URLs from being queried.
Fixes <http://bugs.gnu.org/28212>.
Reported by Leo Famulari <leo@famulari.name>.
* guix/build/graft.scm (replace-store-references): When I >= END, check
whether WRITTEN > END and call 'get-bytevector-n!' when it is.
* tests/grafts.scm (buffer-size): New variable.
("replace-store-references, <http://bugs.gnu.org/28212>"): New test.
Works around <https://bugs.gnu.org/28211>.
Reported by Marius Bakke <mbakke@fastmail.com>.
* guix/packages.scm (guile-2.0): New procedure.
(package-derivation, package-cross-derivation): Use it when computing
the #:guile argument to 'graft-derivation'.
* gnu/bootloader.scm (<bootloader-configuration>): Deprecate "device" field in
favor of "target" field. This is mostly a renaming but also a generalization
to support UEFI targets being paths to a mounted partition instead of a device
name.
* gnu/system/examples/bare-bones.tmpl:
* gnu/system/examples/desktop.tmpl:
* gnu/system/examples/lightweight-desktop.tmpl:
* gnu/system/examples/vm-image.tmpl:
* gnu/system/install.scm:
* gnu/tests.scm:
* gnu/tests/install.scm:
* gnu/tests/nfs.scm:
* tests/system.scm: Adapt all invocations of bootloader-configuration.
* guix/scripts/system.scm (perform-action): Rename device argument to
bootloader-target.
(process-action): Adapt caller.
* doc/guix.texi (Proceeding with the Installation):
* doc/guix.texi (Bootloader Configuration): Update documentation.
* guix/scripts/download.scm (guix-download): Treat the URL argument as a local
file path when it fails on 'string->uri'. Call 'fetch' with the processed
'uri' instead of the original URL argument.
* tests/guix-download.sh: Adjust accordingly.
* guix/scripts/pull.scm (build-from-source): Add #:commit parameter.
Pass it to BUILD.
(build-and-install): Add #:commit and pass it to 'build-from-source'.
(guix-pull): Pass #:commit to 'build-and-install'.
* guix/scripts/pull.scm (%snapshot-url, with-environment-variable)
(with-PATH): Remove.
(ensure-guile-git!): New procedure.
(%repository-url): New variable.
(%default-options): Add 'repository-url' and 'ref'.
(show-help, %options): Add '--commit' and '--url'.
(temporary-directory, first-directory, interned-then-deleted)
(unpack): Remove.
(build-from-source): Rename 'tarball' to 'source'. Remove call to
'unpack'.
(build-and-install): Rename 'tarball' to 'source'.
(honor-lets-encrypt-certificates!, report-git-error): New procedures.
(with-git-error-handling): New macro.
(guix-pull)[fetch-tarball]: Remove.
Wrap body in 'with-git-error-handling'. Rewrite to use
'latest-repository-commit'.
* build-aux/build-self.scm (build): Print an error message and exit when
GUILE-GIT is #f.
* doc/guix.texi (Invoking guix pull): Mention Git. Document '--commit'
and '--branch'.
Fixes <https://bugs.gnu.org/27820>.
Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>.
* guix/scripts/package.scm (%options) <"-u">: Emit a warning when ARG
starts with "-".
* guix/git-download.scm (git-predicate): Remove call to
'canonicalize-path' since this could lead to discrepancies. For
instance it broke 'make update-guix-package' since it passes a
non-canonical directory name.
* gnu/bootloader.scm (menu-entry-device-mount-point): New variable. Export it.
(<menu-entry>: New field "device".
* gnu/bootloader/grub.scm (grub-confgiuration-file): Handle <menu-entry>
entries.
* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Handle
<menu-entry> entries.
* gnu/system.scm (menu->entry->boot-parameters): Delete variable.
(boot-parameters->menu-entry): New variable. Export it.
(operating-system-bootcfg): Make OLD-ENTRIES a list of <menu-entry>.
* guix/script/system.scm (reinstall-bootloader): Fix bootcfg usage.
(perform-action): Fix bootcfg usage.
Adjust 'git-predicate' to use data structures that perform better when used
with git repositories with a large number of files.
Previously when matching either a regular file or directory, 'git-predicate'
would search a list with a length equal to the number of files in the
repository. As a search operation happens for roughly every file in the
repository, this meant that the time taken to use 'git-predicate' to traverse
all the files in a repository was roughly exponential with respect to the
number of files in the repository.
Now, for matching regular files or symlinks, 'git-predicate' uses a vhash
using the inode value as the key. This should perform roughly in constant
amount of time, instead of linear with respect to the number of files in the
repository.
For matching directories, 'git-predicate' now uses a tree structure stored in
association lists. To check if a directory is in the tree, the tree is
traversed from the root. The time complexity of this depends on the shape of
the tree, but it should be an improvement on searching through the list of all
files.
* guix/git-download.scm (files->directory-tree, directory-in-tree?): New
procedures.
(git-predicate): Compute DIRECTORY-TREE. Turn INODES into a vhash.
Adjust body of lambda accordingly.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
The '%slots' list could grow indefinitely; in practice though,
guix-daemon is likely to restart 'guix offload' often enough.
* guix/scripts/offload.scm (%slots): Remove.
(choose-build-machine): Don't 'set!' %SLOTS. Return the acquired slot
as a second value.
(process-request): Adjust accordingly. Release the returned slot after
'transfer-and-offload'.
This fixes a memory leak that can be seen by running:
(map (lambda _ (machine-load m)) (iota 1000))
* guix/scripts/offload.scm (machine-load): Add call to 'disconnect!'.
Suggested by Mark H Weaver <mhw@netris.org>.
* guix/scripts/publish.scm (nar-expiration-time): New procedure.
(render-narinfo/cached): Use it as the #:entry-expiration passed to
'maybe-remove-expired-cache-entries'.
Previously this operation was linear in the number of requests and
involved costly calls to 'string-contains'.
* guix/scripts/substitute.scm (fetch-narinfos)[hash-part->path]: New
procedure.
[handle-narinfo-response]: Use it for caching when CODE is not 200.
Reported by Ricardo Wurmus.
* guix/gexp.scm (local-file): Define using 'syntax-case' instead of
'syntax-rules'. Explicitly handle the zero-argument case and the
use-as-an-identifier case.
Fixes <https://bugs.gnu.org/25762>.
Reported by Ricardo Wurmus <rekado@elephly.net>.
* guix/scripts/package.scm (canonicalize-profile): Trim trailing slashes
from PROFILE.
Previously, (gexp-native-inputs #~#$@(list #~#+foo)) would return '().
This is a followup to 5b14a7902c.
* guix/gexp.scm (gexp-inputs)[add-reference-inputs]: In the list case,
remove 'if' around 'fold-right'. In 'map' lambda, always inherit N?.
* tests/gexp.scm ("gexp list splicing + ungexp-splicing"): New test.
Prior to this change, half of the cached narinfos would expire
immediately since they contained the number of nanoseconds instead of
the number of seconds as their date.
* guix/scripts/substitute.scm (time-monotonic) <guile-2.2>: Define, as a
workaround.
Before this change '--substitute-urls' would be ignored.
* guix/scripts/environment.scm (build-environment): Remove redundant
call to 'set-build-options-from-command-line*'.
(guix-environment): Move 'set-build-options-from-command-line' right
after 'with-store'.
* guix/build/syscalls.scm (network-interface-running?): New variable.
Export it.
* tests/syscalls.scm: Add test.
Co-authored-by: John Darrington <jmd@gnu.org>
Reported by rennes@openmailbox.org.
* guix/build/syscalls.scm (file-type->symbol): New procedure.
(%struct-dirent-header): Rename to...
(%struct-dirent-header/linux): ... this. Rename introduced bindings as
well.
(%struct-dirent-header/hurd): New C struct.
(define-generic-identifier): New macro.
(read-dirent-header, %struct-dirent-header, sizeof-dirent-header):
Define in terms of 'define-generic-identifier'.
This allows us to use texmf.cnf instead of having to set all required
environment variables manually.
* guix/build/texlive-build-system.scm (configure): New procedure.
(build): Simplify.
(%standard-phases): Add configure phase.
* guix/build-system/texlive.scm (texlive-build): Include (guix build union) in
modules.
(%texlive-build-system-modules): Likewise.
Reported by Christopher Baines <mail@cbaines.net>
and Alex Kost <alezost@gmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2017-06/msg00290.html>.
* guix/discovery.scm (scheme-files): When ENTRY is a symlink that
doesn't end in '.scm', call 'stat' and recurse if it points to a
directory.
* tests/discovery.scm ("scheme-modules recurses in symlinks to
directories"): New test.
Failing to do that, "%p" would be "0" when using "ProxyCommand"
in ~/.ssh/config.
* guix/scripts/copy.scm (send-to-remote-host): Default to port 22.
(retrieve-from-remote-host): Likewise.
This will pull the latest 'desktop-file-utils' package into the profile
closure, as the 'xdg-mime-database' hook already does.
* guix/profiles.scm (xdg-desktop-database): Run the hook when 'glib' is
referenced.
* guix/scripts/system.scm (process-action): Pass file-system-type to ...
(perform-action): ... here. Add new keyword argument. Pass new value to ...
(system-derivation-for-action): ... here. Add new keyword argument.
Pass new value to system-disk-image.
* doc/guix.texi (disk-image): Document new option.
Until now the cache was always empty because 'for-each' was passed ITEMS
as its second argument, and ITEMS was the empty list at that point.
* guix/store.scm (references/substitutes): Add 'requested' variable.
Use it as second argument of 'for-each' in base case.
* gnu/build/vm.scm (estimated-partition-size): New procedure.
* gnu/system/vm.scm (expression->derivation-in-linux-vm):
Change #:disk-image-size default to 'guess.
[builder]: When DISK-IMAGE-SIZE is 'guess, use
'estimated-partition-size' and compute and estimate of the image size.
(qemu-image): Likewise.
* guix/build/store-copy.scm (file-size, closure-size): New procedures.
* guix/scripts/system.scm (%default-options): Change 'image-size' to
'guess.
* doc/guix.texi (Building the Installation Image): Remove '--image-size'
flag from example.
(Invoking guix system): Document the image size estimate.
Fixes <http://bugs.gnu.org/27262>.
Reported by Mark H Weaver <mhw@netris.org>.
* guix/scripts/package.scm (transaction-upgrade-entry): Check if ENTRY
matches 'manifest-transaction-removal-candidate?' and return TRANSACTION
if it does.
(process-actions): Move 'options->removable' from step 2 to step 1.
* guix/profiles.scm (manifest-transaction-removal-candidate?): New
procedure.
* tests/profiles.scm ("manifest-transaction-removal-candidate?"): New
test.
Fixes <http://bugs.gnu.org/27261>.
Reported by Mark H Weaver <mhw@netris.org>.
* guix/scripts/package.scm (transaction-upgrade-entry): Add call to
'warning' when NAME cannot be found in the package set.
* guix/scripts/refresh.scm (check-for-package-update): Use
'version-compare' instead of 'version>?'. When WARN? is true, print
something for the '=' and '<' cases.
* guix/store.scm (%default-guix-port): New variable.
(connect-to-daemon)[connect]: Use it when (uri-port uri) is #f.
* doc/guix.texi (The Store): Mention the default port number.
Reported by Efraim Flashner.
This is a followup to a654dc4bcf.
* guix/profiles.scm (profile-derivation): Add #:allow-collisions? and
honor it.
* guix/scripts/environment.scm (inputs->profile-derivation): Pass
#:allow-collisions? #f to 'profile-derivation'.
* tests/guix-environment.sh: Test "guix environment guix".
* guix/profiles.scm (<manifest-entry>)[parent]: New field.
(package->manifest-entry): Add #:parent parameter. Fill out the
'parent' field of <manifest-entry>; pass #:parent in recursive calls.
* guix/profiles.scm (sexp->manifest)[sexp->manifest-entry]: New
procedure. Use it for version 3.
* tests/profiles.scm ("manifest-entry-parent"): New procedure.
("read-manifest")[entry->sexp]: Add 'manifest-entry-parent' to the
result.
* guix/profiles.scm (package->manifest-entry): Turn DEPS into a list of
manifest entries.
(manifest->gexp)[entry->gexp]: Call 'entry->gexp' on DEPS.
Bump version to 3.
(sexp->manifest)[infer-dependency]: New procedure.
Use it for versions 1 and 2. Parse version 3.
(manifest-inputs)[entry->gexp]: New procedure.
Adjust to 'dependencies' being a list of <manifest-entry>.
* tests/profiles.scm ("packages->manifest, propagated inputs")
("read-manifest"): New fields.
For a command like:
guix build python2-numpy -n
this reduces the number of 'write' syscalls from 9.5K to 2.0K.
* guix/store.scm (<nix-server>)[buffer, flush]: New fields.
(open-connection): Adjust accordingly. Call 'buffering-output-port' to
compute the two new fields.
(write-buffered-output, buffering-output-port): New procedures.
(operation): Write to (nix-server-output-port server). Call
'write-buffered-output'.
Fixes a regression introduced in
d27cc3bfaa.
Reported by Ricardo Wurmus <rekado@elephly.net>.
* guix/discovery.scm (scheme-files): Catch 'scandir*' system errors.
Return '() and optionally raise a warning upon 'system-error'.
* tests/discovery.scm ("scheme-modules, non-existent directory"): New
test.
* guix/store.scm (%rpc-calls): New variable.
(show-rpc-profile, record-operation): New procedures.
(operation): Add call to 'record-operation'.
* guix/ui.scm (run-guix-command): Wrap COMMAND-MAIN in 'dynamic-wind'.
Run EXIT-HOOK.
On a command like:
guix environment --ad-hoc coreutils -- true
this reduces the number of 'stat' calls from 14.1K to 9.7K on my
setup (previously each getdents(2) call would be followed by one stat(2)
call per entry).
* guix/discovery.scm (scheme-files): Rewrite using 'scandir*'.
* guix/scripts/package.scm (find-packages-by-description): Rewrite to
compute a score based on the number of regexps matched and the number of
matches for each regexp. Sort according to this score and return it as
a second value.
(process-query) <'search>: Capture the two return values of
'find-packages-by-description'. Pass #:extra-fields to
'package->recutils'.
* doc/guix.texi (Invoking guix package): Mention relevance, give an
example.
This avoids the open/fstat/close syscalls upon a cache hit that we had
with the previous idiom:
(call-with-input-file file read-derivation)
where caching happened in 'read-derivation' itself.
* guix/derivations.scm (%read-derivation): Rename to...
(read-derivation): ... this.
(read-derivation-from-file): New procedure.
(derivation-prerequisites, substitution-oracle)
(derivation-prerequisites-to-build):
(derivation-path->output-path, derivation-path->output-paths):
(derivation-path->base16-hash, map-derivation): Use
'read-derivation-from-file' instead of (call-with-input-file …
read-derivation).
* guix/grafts.scm (item->deriver): Likewise.
* guix/scripts/build.scm (log-url, options->things-to-build): Likewise.
* guix/scripts/graph.scm (file->derivation): Remove.
(derivation-dependencies, %derivation-node-type): Use
'read-derivation-from-file' instead.
* guix/scripts/offload.scm (guix-offload): Likewise.
* guix/scripts/perform-download.scm (guix-perform-download): Likewise.
* guix/scripts/publish.scm (load-derivation): Remove.
(narinfo-string): Use 'read-derivation-from-file'.
The `install' phase of the emacs-build-system contained default arguments
duplicated from the host side `emacs-build' procedure. This change factorizes
them so that:
1. They are not duplicated.
2. They can be reused and extended easily when defining emacs packages.
* guix/build/emacs-build-system.scm (%default-include, %default-exclude): New
variables.
(install): Use %default-include and %default-exclude as default arguments.
* guix/build-system/emacs.scm: Use and re-export %default-include,
%default-exclude from (guix build emacs-build-system).
(emacs-build): Use %default-include and %default-exclude as default arguments.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
Fixes <http://bugs.gnu.org/26972>.
* guix/ssh.scm (store-import-channel)[import]: Add 'consume-input'
procedure. Wrap body in 'catch' and 'guard'. Use 'open-remote-pipe'
with OPEN_BOTH instead of 'open-remote-output-pipe'.
(send-files): After the 'channel-send-eof' call, do (read port).
Interpret the result sexp and raise an error condition if needed.
* guix/derivations.scm (derivation-prerequisites-to-build): Rename
#:substitutable? to #:substitutable-info.
[derivation-substitutable?]: Rename to...
[derivation-substitutable-info]: ... this. Return a list of <substitutable>.
Second return value is now a list of <substitutable> instead of a list
of strings.
* guix/ui.scm (show-what-to-build)[substitutable?]: Rename to...
[substitutable-info]: ... this.
Adjust to new 'derivation-prerequisites-to-build' return value type.
* tests/derivations.scm ("derivation-prerequisites-to-build and
substitutes"): Adjust.
("derivation-prerequisites-to-build and substitutes, local build"):
Likewise.
* guix/derivations.scm (substitution-oracle): Use
'substitution-path-info' instead of 'substitution-paths'. Turn SUBST
into a vhash from path to <substitutable>. Change the returned
procedure to provide a <substitutable> instead of a Boolean.
* tests/derivations.scm ("substitution-oracle and #:substitute? #f"):
Mock 'substitutable-path-info' instead of 'substitutable-paths'.
The compress-documentation phase was breaking recursive symbolic links used
for manuals, which was made visible by the `find-files' call in the recently
added `manual-database' profile hook. See <http://bugs.gnu.org/26771>.
* guix/build/gnu-build-system.scm (compress-documentation)
[points-to-symbolic-link?]: New procedure.
[maybe-compress-directory]: Use `points-to-symbolic-link?' to filter out
symbolic links that shouldn't be retargetted, and re-order the calls to
`retarget-symlink' and `documentation-compressor'.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
git ls-files will return paths relative to the repository directory. This
commit prepends the repository directory to those paths when calling lstat,
such that 'git-predicate' works if the current working directory is not the
repository directory.
* guix/git-download.scm (git-predicate): Prepend repository directory to the
file path when calling lstat.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Reported by Mark H Weaver <mhw@netris.org>
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=26948#17>.
* guix/build/download.scm (set-certificate-credentials-x509-trust-file!*):
New procedure.
(make-credendials-with-ca-trust-files): Use it instead of
'set-certificate-credentials-x509-trust-file!'.
This allows 'guix publish' threads as well as 'guix substitute' and
'guix offload' processes to be properly labeled in 'top', 'pstree', etc.
* guix/workers.scm (worker-thunk): Add #:thread-name parameter and honor it.
(make-pool): Likewise.
* guix/scripts/publish.scm (http-write): Add calls to 'set-thread-name'
in bodies of 'call-with-new-thread'.
(guix-publish): Call 'set-thread-name'. Pass #:thread-name to 'make-pool'.
* guix/scripts/offload.scm (guix-offload): Call 'set-thread-name'.
* guix/scripts/substitute.scm (guix-substitute): Likewise.
Fixes <http://bugs.gnu.org/26987>.
Reported by Mathieu Othacehe <m.othacehe@gmail.com>.
* guix/build/pull.scm (depends-on-guile-ssh?): Remove.
(has-all-its-dependencies?): New procedure.
(build-guix): Use it to filter source files.
* guix/modules.scm (&missing-dependency-error): New error condition.
(source-module-dependencies): Raise it when 'search-path' returns #f.
* tests/modules.scm ("&missing-dependency-error"): New test.
Before this patch, there was a possibility that we'd queue several
baking tasks for the same item. The first one would bake the item but
subsequent tasks wouldn't check whether the item had been baked in the
meantime and would re-bake it.
* guix/scripts/publish.scm (render-narinfo/cached): Don't call
'bake-narinfo+nar' when (file-exists? cached).
Fixes <http://bugs.gnu.org/27017>.
Reported by Alex Vong <alexvong1995@gmail.com>.
* guix/scripts/package.scm (process-query) <'list-generations>: Wrap
body in 'leave-on-EPIPE'.
This prevents a ".el.el" extension for source files with no version number in
their file name.
* guix/build/emacs-build-system.scm (store-file->elisp-source-file): Remove
".el" extension from file name before splitting to name and version.
Fixes <http://bugs.gnu.org/27005>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.
Fixes a regression introduced in commit
2252f087d4.
* guix/scripts/pack.scm (docker-image)[json]: New variable.
[build]: Use it.
Fixes <http://bugs.gnu.org/27005>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.
Fixes a regression introduced in commit
2252f087d4.
* guix/scripts/pack.scm (docker-image)[json]: New variable.
[build]: Use it.
Fixes <http://bugs.gnu.org/26975>.
Reported by Mark H Weaver <mhw@netris.org>.
* guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd
argument to 'stat' and properly handle #f.
* tests/publish.scm (wait-for-file): New procedure.
("with cache"): Remove 'wait-for-file' procedure.
("with cache, uncompressed"): New test.
Fixes <http://bugs.gnu.org/26949>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.
* guix/build/union.scm (file-is-directory?): Return #f when FILE does
not exist or is a dangling symlink.
(file=?): Pass #f as a second argument to 'stat'; return #f when both
ST1 or ST2 is #f.
* tests/profiles.scm (test-equalm): New macro.
("union vs. dangling symlink"): New test.
Fixes <http://bugs.gnu.org/26975>.
Reported by Mark H Weaver <mhw@netris.org>.
* guix/scripts/publish.scm (bake-narinfo+nar): Pass #f as the 2nd
argument to 'stat' and properly handle #f.
* tests/publish.scm (wait-for-file): New procedure.
("with cache"): Remove 'wait-for-file' procedure.
("with cache, uncompressed"): New test.
Fixes <http://bugs.gnu.org/26949>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.
* guix/build/union.scm (file-is-directory?): Return #f when FILE does
not exist or is a dangling symlink.
(file=?): Pass #f as a second argument to 'stat'; return #f when both
ST1 or ST2 is #f.
* tests/profiles.scm (test-equalm): New macro.
("union vs. dangling symlink"): New test.
* guix/import/cran.scm (%bioconductor-svn-url): Remove variable.
(bioconductor-mirror-url): New procedure.
(fetch-description): Take a REPOSITORY symbol instead of a BASE-URL string.
(cran->guix-package): Pass REPOSITORY symbol to "fetch-description".
(latest-cran-release, latest-bioconductor-release): Adjust accordingly.
(bioconductor-package?): Update comment about SVN.
* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument.
[builder]: Pass it to the build system.
(package-with-build-system)[transform]: Strip it from source systems' arguments.
* guix/build/asdf-build-system.scm (check): Pass the fully qualified path to
it on to the test-system procedure.
* guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of
the often used names for it, before running the tests. Adjust the docstring
accordingly.
In support of long-running programs in which the users would like to be able
to jump to the source of a definition of any of the dependencies (itself
included) of the program.
* guix/build/asdf-build-system.scm (library-outputs): Move from here ...
* guix/build/lisp-utils.scm (library-outputs): ... to here.
(build-program): Accept dependency-prefixes argument, to allow the caller to
specify references which should be retained. Default to the library's output.
(build-image): Likewise.
(generate-executable): Likewise.
* gnu/packages/lisp.scm (sbcl-stumpwm+slynk, sbcl-slynk, sbcl-stumpwm): Adjust
accordingly to the new interface.
(sbcl-stumpwm+slynk)[native-inputs]: Move to ...
[inputs]: ... here.
Accept a list of statements, each run within its own `--eval' argument. This
allows statements to use reader package namespacing after a package has been
loaded.
* guix/build/lisp-utils.scm (spread-statements): New procedure.
(lisp-invoke): Rename to ...
(lisp-invocation): ... this. Use spread-statements. Change interface to accept
list of statements instead of a single statement.
(asdf-load-all-systems): Simplify returned statements.
(compile-system): Simplify the program passed to `lisp-eval-program'.
(test-system): Likewise.
(generate-executable-for-system): Likewise. Accept the full symbol describing
the asdf operation to use.
(generate-executable): Document the change.
(build-program, build-image): Use the new interface.
* guix/build/lisp-utils.scm (valid-char-set): New variable.
(normalize-string): New procedure.
(compiled-system): Truncate the name of a system which contains slashes.
(generate-system-definition, make-asd-file): Use `normalize-string' to alter
the names of the created system and its dependencies.
* guix/build/asdf-build-system.scm (create-asd-file): Normalize the name of
the asd file being created.
* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default
`#:asd-file' argument to the build procedure, using the system's name.
* guix/build/asdf-build-system.scm (build, check): Adjust to assume that
`asd-file' will always be a string.
* guix/build/lisp-utils.scm (compile-system, system-dependencies)
(test-system): Likewise.
* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name,
or calculate it from the package's full name.
[builder]: Pass the value along to the build procedure.
(package-with-build-system): Remove #:asd-system-name from source packages'
arguments.
* guix/build/asdf-build-system.scm: Adjust accordingly.
* guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable.
* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type
and %lisp before invoking the build procedure. Don't pass #:lisp-type as an
argument to said procedure.
* guix/build/asdf-build-system.scm: Adjust accordingly.
(source-install-prefix): Rename to %lisp-source-install-prefix.
* guix/build/lisp-utils.scm: Adjust accordingly.
(%lisp-type): New parameter.
(bundle-install-prefix): Rename to %bundle-install-prefix.
* gnu/packages/lisp.scm: Adjust accordingly.
* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'.
(asdf-build): Change argument name to `lisp-type'. Remove `lisp' as an
argument to the returned procedure. Change the argument passed to build
phases to `lisp-type'.
* guix/build/asdf-build-system.scm (copy-source, build, check)
(create-asd-file, symlink-asd-files, cleanup-files, strip): Respect
`lisp-type` argument.
* gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise.
* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated
`new-inputs' procedure for inputs and native-inputs.
<rewrite>: Don't rename inputs.
<new-propagated-inputs>: Draw from package-inputs and package-native-inputs
for source packages. Use the original package's propagated-inputs otherwise.
<new-inputs>: Convert into a function to be used to transform inputs and
native-inputs.
* gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads)
(sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists)
(sbcl-slynk-fancy-inspector): Don't prefix input names.
This removes the need for conventions to determine which inputs are run-time
dependencies, and also the need to specify "special" dependencies.
* guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies)
(wrap-perform-method): Remove them.
(inputs->asd-file-map, system-dependencies, generate-system-definition)
(generate-dependency-links, make-asd-file): New procedures.
(lisp-eval-program): Add an error if no lisp matches.
(compile-system): Don't use asdf's in-built asd-file generator.
* guix/build/asdf-build-system.scm (library-output): New procedure.
(copy-source, build, check, patch-asd-files, symlink-asd-files)
(cleanup-files): Use it.
(copy-files-to-output): Rework to take an output instead of an outputs and
string pair.
(install, copy-source): Use the new method.
* guix/scripts/system.scm (reinstall-grub): Rename to
reinstall-bootloader. Read boot-device and boot-type from parameters file to
be able to restore the correct bootloader on specified device.
Factorize bootloader installation code by calling install-bootloader.
(system-bootloader-name): New procedure.
(switch-to-system-generation): Adapt.
* guix/scripts/system.scm (install): Pass installer a new
argument. Rename other arguments.
Call install-bootloader instead of install-grub*.
(perform-action): Adapt.
* guix/scripts/system.scm (install-grub*): Rename to install-bootloader. Use
keys to pass arguments. Pass a new argument, "installer-drv" which is a script
in store dealing with bootloader-specific install actions. Also call
"install-boot-config" to install the bootloader config file.
(install-bootloader-derivation): New procedure. It returns a derivation that
builds a file containing "install-procedure" gexp.
(perform-action): Build install-proc derivation and call install-bootloader
with the resulting file. Stop adding GRUB to PATH as bootloaders are called in
install-proc with direct store paths.
* gnu/bootloader.scm: New file.
* gnu/bootloader/extlinux.scm: New file.
* gnu/bootloader/grub.scm: New file.
* gnu/local.mk: Build new files.
* gnu/system.scm: Adapt to new bootloader api.
* gnu/scripts/system.scm: Adapt to new bootloader api.
* gnu.scm: Remove (gnu system grub) and replace by (gnu bootloader) and (gnu
bootloader grub) modules.
* gnu/system/grub.scm: Moved content to gnu/bootloader/grub.scm.
* gnu/system/vm: Replace (gnu system grub) module by (gnu bootloader).
* gnu/tests.scm: Ditto.
* gnu/tests/nfs.scm: Ditto.
Suggested by Ricardo Wurmus.
* guix/build/bournish.scm (ls-command-implementation): When FILE is a
directory, list its contents rather than FILE itself.
* guix/import/cran.scm (package->upstream-name): Return #f if url
start and end index could not be determined.
(cran-package?): Check if the upstream-name can be extracted from
given package.
* tests/cran.scm: Add "r-minimal is not a cran package" to make sure that
r-minimal is not detected as a cran package.
This fixes a failure of guix refresh on r-minimal because no
upsteam-name can be determined from ".../R-version.tar.gz" uri.
This fixes runs of 'guix package' and 'guix system' tests in
environments where $HOME is read-only.
* guix/ui.scm (config-directory): Add #:ensure? parameter and honor it.
* guix/scripts.scm (warn-about-old-distro): Pass #:ensure? #f to
'config-directory'.
* guix/scripts/substitute.scm (cached-narinfo): When VALUE is #f, use
the TTL that is read instead of %NARINFO-NEGATIVE-TTL.
(cached-narinfo-expiration-time): Likewise.
* guix/scripts/publish.scm (not-found): Add #:phrase and #:ttl
parameters and honor them.
* tests/publish.scm ("with cache"): Check the 'cache-control' header on
of the 404 response.
Fixes <http://bugs.gnu.org/25852>.
Suggested by Mark H Weaver <mhw@netris.org>.
* guix/scripts.scm (%distro-age-warning): New variable.
(warn-about-old-distro): New procedure.
* guix/scripts/package.scm (process-actions): Call
'warn-about-old-distro'.
* guix/scripts/system.scm (process-action): Likewise.
* guix/build/java-utils.scm: New file.
* guix/build-system/ant.scm: Use it.
* Makefile.am (MODULES): Add it.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* guix/build/pull.scm (%default-optimizations)
(%lightweight-optimizations): New variables.
(optimization-options): New procedure. Taken from
build-aux/compile-all.scm.
(build-guix): Pass it to 'compile-file'.
Previously, 'guix pull' would always build with Guile 2.0.
Now it builds with the Guile that matches (effective-version).
* build-aux/build-self.scm (false-if-wrong-guile)
(package-for-current-guile): New procedures.
(guile-json, guile-ssh): Use it.
(guile-for-build): New procedure.
(build): Use (effective-version) instead of the hard-coded "/2.0".
Add (guix modules) closure to #:modules argument. Pass
\#:guile-for-build argument to 'gexp->derivation'.
* guix/build/pull.scm (depends-on-guile-ssh?, all-scheme-files): New
procedures.
(build-guix): Show the output of (version). Use the above procedures.
Filter out files that match 'depends-on-guile-ssh?' when (ssh session)
is missing.
Reported by Niall Dooley <dooleyn@gmail.com>
in <https://lists.gnu.org/archive/html/help-guix/2017-05/msg00038.html>.
* guix/scripts/pull.scm (%options): Add --dry-run and all of
%STANDARD-BUILD-OPTIONS.
(show-help): Add call to 'show-build-options-help'.
(%default-options): Add 'system', 'substitutes?', 'graft?',
'max-silent-time', and 'verbosity'.
(guix-pull)[parse-options]: Remove.
Use 'parse-command-line' instead. Honor --dry-run.
Previously, it the predicate would return #t for "m4/ChangeLog" if
"ChangeLog" (in the top-level directory) was in FILES. This commit
fixes the ambiguity.
* guix/git-download.scm (git-predicate): Add 'inodes' variable. Use it
to determine file membership.
* gnu/system/grub.scm (boot-parameters->menu-entry): New variable.
(grub-configuration-file): Use boot-parameters
instead of menu-entry where possible.
* guix/scripts/system.scm (profile-boot-parameters): Update docstring.
(reinstall-grub): Use profile-boot-parameters.
(perform-action): Use profile-boot-parameters.
* gnu/system.scm (read-boot-parameters): Remove export.
(read-boot-parameters-file): New variable. Export it.
* guix/scripts/system.scm (profile-boot-parameters): Use
read-boot-parameters-file.
(profile-grub-entries): Use read-boot-parameters-file.
(reinstall-grub): Use read-boot-parameters-file.
(display-system-generation): Use read-boot-parameters-file.
* guix/scripts/refresh.scm (maybe-updater, list-updaters): Remove.
(importer-modules): New procedure.
(%updaters): Define using 'fold-module-public-variables'. Turn into a
promise and adjust users.
* guix/monads.scm (%templates, %template-instances): New variables.
(register-template!, register-template-instance!): New procedures.
(template-directory, define-template): New macro.
(foldm, sequence, anym): Define using 'define-template'. Avoid replace
ellipses with dots.
(mapm): Likewise, but do not use 'foldm'.
* guix/store.scm: Add 'template-directory' invocation.
This allows us to download from site such as
<https://fusionforge.int-evry.fr> where the server does not recognize
the server name passed via the 'server_name' extension.
* guix/build/download.scm (tls-wrap): Catch 'gnutls-error' around
'handshake'. Upon ERROR/WARNING-ALERT-RECEIVED, print a message and
call 'handshake'.
* guix/scripts/publish.scm (narinfo-string): Add #:file-size parameter.
Produce a "FileSize" field when COMPRESSION is eq? to '%no-compression'
or when FILE-SIZE is true.
(bake-narinfo+nar): Pass #:file-size.
* tests/publish.scm ("/*.narinfo")
("/*.narinfo with properly encoded '+' sign")
("with cache"): Check for "FileSize".
* guix/scripts/refresh.scm (list-dependents)[full-name]: New procedure.
Use 'full-name' instead of 'package-full-name'.
* doc/guix.texi (Invoking guix refresh): Adjust example accordingly.
Reported by Mark H Weaver <mhw@netris.org>
at <https://lists.gnu.org/archive/html/guix-devel/2017-04/msg00457.html>.
* guix/derivations.scm (build-expression->derivation): Use a string
output port for the expression. This reverts part of
2dce88d5bb.
* tests/derivations.scm ("build-expression->derivation and builder
encoding"): New test.
This allows 'guix' commands to talk to a remote store over SSH.
* guix/store.scm (connect-to-daemon)[connect]: Call 'resolve-interface'
for unknown URI schemes.
* guix/store/ssh.scm: New file.
* Makefile.am (MODULES): Add it.
* doc/guix.texi (The Store): Document it. Mark remote access as
experimental.
On Guile 2.2.1, this yields a 5% speedup on:
guix build libreoffice xmonad certbot -n --no-substitutes --no-build-hook
* guix/derivations.scm (derivation->string): Rename to...
(derivation->bytevector): ... this. Use 'open-bytevector-output-port'
instead of 'call-with-output-string'.
(derivation-hash): Remove string-to-bytevector conversion before
'sha256' call.
(build-expression->derivation): Use 'add-data-to-store' and an
bytevector port instead of a string port for the expression.
Suggested by Quiliro <quiliro@riseup.net>
in <https://bugs.gnu.org/26567>.
* guix/scripts/publish.scm (render-home-page): New procedure.
(make-request-handler): Handle it.
* guix/scripts/publish.scm (narinfo-files): New procedure.
(render-narinfo/cached)[delete-file]: New procedure. Add call to
'maybe-remove-expired-cache-entries'.
* doc/guix.texi (Invoking guix publish): Document the interation between
--cache and --ttl.
* guix/cache.scm, tests/cache.scm: New files.
* Makefile.am (MODULES, SCM_TESTS): Add them.
* guix/scripts/substitute.scm (obsolete?): Remove.
(remove-expired-cached-narinfos): Rename to...
(cached-narinfo-expiration-time): ... this. Remove the removal part and
only keep the expiration time part.
(narinfo-cache-directories): Add optional 'directory' parameter and
honor it.
(maybe-remove-expired-cached-narinfo): Remove.
(cached-narinfo-files): New procedure.
(guix-substitute): Use 'maybe-remove-expired-cache-entries' instead of
'maybe-remove-expired-cached-narinfo'.
Fixes <http://bugs.gnu.org/26201>.
Reported by <dian_cecht@zoho.com>.
These options allow nars to be "baked" off-line and cached instead of
being compressed on the fly. As a side-effect, this allows us to
provide a 'Content-Length' header for nars.
* guix/scripts/publish.scm (show-help, %options): Add '--cache' and
'--workers'.
(%default-options): Add 'workers'.
(nar-cache-file, narinfo-cache-file, run-single-baker): New procedures.
(single-baker): New macro.
(render-narinfo/cached, bake-narinfo+nar)
(render-nar/cached): New procedures.
(make-request-handler): Add #:cache and #:pool parameters and honor
them.
(run-publish-server): Likewise.
(guix-publish): Honor '--cache' and '--workers'.
* tests/publish.scm ("with cache"): New test.
* doc/guix.texi (Invoking guix publish): Document it.
* guix/scripts/system.scm (%options, show-help): Adjust accordingly.
Keep "--no-grub" for compatibility reasons, but do not mention it in the help.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
Reported by Mathieu Othacehe <m.othacehe@gmail.com>
at <http://bugs.gnu.org/26498>.
* guix/scripts/lint.scm (warn-if-package-has-input): Rename to...
(package-input-intersection): ... this. Remove 'linted' and 'message'
parameters. Return a list of inputs.
(check-inputs-should-be-native): Adjust accordingly.
(check-inputs-should-not-be-an-input-at-all): Likewise.
This provides a ~2x speedup when using 4 threads.
* guix/packages.scm (patch-and-repack)[build]: Invoke xz with
'--threads=0' when re-packing tarballs.
* guix/scripts/system.scm (profile-boot-parameters): New variable.
(reinstall-grub): Use profile-boot-parameters.
(perform-action): Use profile-boot-parameters.
Follow-up to 2e58e05bb6.
* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* guix/scripts/system.scm (save-load-path-excursion,
save-environment-excursion): Move definitions to the top of the file.
It allows to use them in the whole file.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* guix/build/cargo-build-system.scm (generate-checksums): Remove store
reference from comment. This comment was matching
assert-no-store-file-names regexp in Makefile.am.
Also, edit procedure docstring to precise that DIR-NAME is a store
directory.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix/monads.scm (mwhen, munless): Rename parameters from 'exp0' and 'exp' to
'mexp0' and 'mexp', respectively. This makes it more obvious that these
expressions must be monadic expressions.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* guix/build/syscalls.scm (mount): Use Guile core mount if called from
static Guile, otherwise use FFI based mount implementation.
(umount): Ditto.
This allows to use (guix build syscalls) from a module independently
of calling context.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
The mandb database file (index.db) is used by the "apropos" (whatis) or
"man -k" commands. This change introduces a profile hook to generate
such database file.
* guix/profiles.scm (manual-database): New procedure.
(%default-profile-hooks): Add it.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* guix/build-system/python.scm (package-with-explicit-python)
[package-variant, cut?]: New procedures.
[transform]: Remove 'mlambdaq' form and input tuple handling.
Use 'package-mapping'.
* guix/packages.scm (package-mapping): New procedure.
(package-input-rewriting): Rewrite in terms of 'package-mapping'.
* tests/packages.scm ("package-mapping"): New test.
* doc/guix.texi (Defining Packages): Document it.
Fixes test failures related to xz compression in tests/utils.scm.
This is a followup to commit 63102406f2.
* guix/utils.scm (decompressed-port, compressed-port, compressed-output-port):
Split each shell argument into its own list element.
Reported by Thomas Sigurdsen <thomas.sigurdsen@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2017-04/msg00007.html>.
* guix/packages.scm (expand-input): Add 'guard' form around call to
'package-source-derivation'.
* tests/packages.scm (dummy): New test.
* gnu/packages/bioinformatics.scm (python-pysam)[arguments] <check>:
Use (negate proc) instead of (compose not proc).
* guix/import/cran.scm (recursive-import): Likewise.
* guix/import/elpa.scm (filter-dependencies): Use 'remove' instead of
'(filter (compose not proc) ...)'.
Fixes a regression introduced in
a4f5423415.
Reported by Hartmut Goebel.
* guix/build/download.scm (ftp-fetch): Account for the case where
'uri-userinfo' returns #f. Remove the case where it returns "" since
that cannot happen.
This avoids connections to substitute servers for derivations that are
not substitutable anyway, such as profiles.
Reported by Andy Wingo.
* guix/derivations.scm (substitution-oracle): Skip derivations that do
not pass 'substitutable-derivation?'.
* tests/derivations.scm ("substitution-oracle and #:substitute? #f"):
New test.
* guix/ui.scm (package-field-string): New procedure.
(package-description-string): Use it.
(package-synopsis-string): New procedure.
(package->recutils): Use it.
* guix/scripts/lint.scm (check-synopsis-style)[check-texinfo-markup]:
New procedure. Use it in checks.
* tests/lint.scm: Test it.
* gnu/packages/perl.scm (perl-try-tiny)[synopsis]: Adjust for the
Texinfo markup.
* guix/build/download.scm (open-connection-for-uri): Add note about
same-named binding in Guile 2.2.0.
* guix/http-client.scm: Use 'guix:open-connection-for-uri' for the
procedure coming from (guix build download).
* guix/scripts/lint.scm: Likewise.
* guix/scripts/substitute.scm: Likewise.
* guix/scripts/pack.scm (self-contained-tarball): Add #:target.
(docker-image): Add #:target.
[build]: Pass it to 'build-docker-image'.
(%options, show-help): Add '--target'.
(guix-pack): Pass TARGET to 'profile-derivation' and to 'build-image'.
* guix/docker.scm (build-docker-image): Add #:system parameter and honor it.
* doc/guix.texi (Invoking guix pack): Document '--target'.
(Additional Build Options): Refer to the Autoconf manual instead of the
obsolete 'configure.info' for cross-compilation.
* guix/scripts/pack.scm (<compressor>)[package]: Remove.
[command]: Document as being a gexp with an absolute file name.
(%compressors): Adjust accordingly.
(self-contained-tarball): Simplify PATH expression. Move 'string-join'
for the compressor command on the build side.
(docker-image): Simplify PATH expression.
* tests/pack.scm (%gzip-compressor): Adjust accordingly.
* guix/build/cargo-build-system.scm (configure): Remove proprietary
dependencies. Add rust dependencies and configure Cargo to find them.
(build): Also build libraries, not just applications.
(file-sha256): New variable.
(generate-checksums): New variable. Export it.
(touch): New variable.
(install): Generate checksums so Cargo accepts the package.
* guix/gexp.scm (imported-files)[file-pair]: Add case for pairs where
the cdr is not a string.
(imported-modules): Support '=>' syntax in MODULES.
* tests/gexp.scm ("imported-files with file-like objects")
("gexp->derivation & with-imported-module & computed module"): New tests.
* doc/guix.texi (G-Expressions): Document '=>' syntax for
'with-imported-modules'.
Before that, something like:
(call-with-container
(lambda ()
(match (primitive-fork)
…)))
would hang in 'primitive-fork' as the child process (the one started in
the container) would try to pthread_join the finalization thread in
'stop_finalization_thread' in libguile, not knowing that this thread is
nonexistent.
* guix/build/syscalls.scm (%set-automatic-finalization-enabled?!): New
procedure.
(without-automatic-finalization): New macro.
(clone): Wrap PROC call in 'without-automatic-finalization'.
In 2.2, 'fport_close' no longer swallows EBADF and instead raises a
'system-error' for this. This commit adjusts for 2.2.
* guix/zlib.scm (close-procedure): Remove.
(make-gzip-input-port): Use 'port->fdes' instead of 'fileno'.
Use 'gzclose' instead of 'close-procedure'.
(make-gzip-output-port): Likewise.
* tests/zlib.scm ("compression/decompression pipe"): Don't check whether
PARENT is closed using 'port-closed?'. Instead, use 'seek' on the
underlying FD and check for EBADF.
* guix/scripts/pack.scm (self-contained-tarball): Add #:tar option.
[build](tar-supports-sort?): New variable. Use it.
* tests/pack.scm: New file.
* Makefile.am (SCM_TESTS): Add it.
* guix/scripts/pack.scm (<compressor>)[tar-option]: Remove.
[command]: New field.
(%compressors): Provide complete commands. Use '-9' or equivalent for
each compressor; use '-n' for gzip.
(self-contained-tarball)[build]: Adjust accordingly.
* guix/scripts/pack.scm (self-contained-tarball): Add #:localstatedir?
parameter and honor it.
(%options, show-help): Add '--localstatedir'.
(guix-pack): Honor it.
* gnu/build/install.scm (populate-single-profile-directory): Add
#:register? parameter and honor it.
* doc/guix.texi (Binary Installation): Use '--localstatedir' in
example.
(Invoking guix pack): Document it.
* guix/build/syscalls.scm (define-bits): Do not define NAMES... as
top-level variables since that prevents literal matches in 2.2.
Instead, determine constant values at expansion time.
Fixes a regression introduced in 7447aa36e1.
Reported by Ricardo Wurmus.
* guix/utils.scm: Revert 7447aa36e1. Use
#:prefix for (ice-9 iconv) to support both 2.0 and 2.2.
In Guile 2.2, (rnrs io ports) exports 'bytevector->string', which
conflicts with that of (ice-9 iconv).
* guix/utils.scm: Hide 'bytevector->string' from (rnrs io ports).
* guix/ui.scm (right-arrow): Call 'set-port-encoding!' to set PORT's
encoding; remove use of 'with-fluids'. This is for compatibility with
Guile 2.2 where the encoding of string ports is not influenced by
%DEFAULT-PORT-ENCODING.
* tests/ui.scm ("show-manifest-transaction"): Likewise.
* guix/ui.scm (fill-paragraph): Don't use '_' as a pattern variable
since that is shadowed by the top-level '_' binding on Guile 2.2.
(show-manifest-transaction): Likewise.
Fixes <http://bugs.gnu.org/25775>.
Reported by Sirgazil, Ricardo Wurmus, Andy Wingo, and others.
* guix/download.scm (in-band-download): Always use GUILE. This reverts
9f05908fb1.
* gnu/packages/bash.scm (url-fetch/reset-patch-level): Remove #:guile.
Pass %BOOTSTRAP-GUILE as #:guile to 'url-fetch'. Remove #:guile-for-build
argument in 'gexp->derivation' call.
In glibc-2.25 a dependency on "linux/falloc.h" was added.
This also reverts commit 8f8f250bdc
which is no longer needed. This commit was not compatible with
the glibc version Hurd is using. See
<https://lists.gnu.org/archive/html/guix-devel/2017-02/msg01046.html>
* guix/build/make-bootstrap.scm (make-stripped-libc): Copy "falloc.h"
to the new system.
* gnu/packages/patches/glibc-bootstrap-system.patch: Remove part
that touches fcntl-linux.h.
Problem reported by Andreas Enge <andreas@enge.fr>.
Fixes <http://bugs.gnu.org/25775>.
* guix/download.scm (in-band-download): Use %bootstrap-guile as a
fall-back when using older daemons that do not have a built-in
downloader.
Written-by: Ricardo Wurmus <rekado@elephly.net>
It doesn't make sense to run non-test executables (which is what "dub run"
would do).
The "check" function already invokes "dub test" and that's enough.
* guix/build/dub-build-system.scm (build): Remove "dub run" invocation.
Fixes <https://bugs.gnu.org/25635>.
Reported by Sergei Trofimovich <slyfox@inbox.ru>.
* guix/import/pypi.scm (guix-package->pypi-name)[url->pypi-name]: New
procedure.
Rewrite body to match lists in addition to strings.
* tests/pypi.scm ("guix-package->pypi-name, several URLs"): New test.
Gtk+3 now have multiple outputs, so the gtk-query-immodules-3.0 should be find
in output "bin" instead of "out".
* guix/profiles.scm (gtk-im-modules): Pass the path of gtk-query-immodules-x.x
as 'query' argument to the 'build' procedure.
Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
* guix/download.scm (url-fetch/tarbomb): Fall back to ‘file-name’ if
‘name’ is #f, like the regular ‘url-fetch’ does.
* gnu/packages/bioinformatics.scm (muscle)[source]: Remove ‘file-name’.
* gnu/packages/engineering.scm (fastcap)[source]: Likewise.
* gnu/packages/scheme.scm (scmutils)[source]: Likewise.
Marius Bakke