52d445f130
gnu: Add rss-bridge.
...
* gnu/packages/web.scm (rss-bridge): New variable.
2017-08-18 07:18:04 +05:30
961012a0a0
gnu: Add missing import.
...
This is a followup to d016b60fa3
2017-08-18 00:48:25 +02:00
a099570249
gnu: openmpi: Add RDMA and libfabric support.
...
* gnu/packages/mpi.scm (openmpi)[inputs]: Add rdma-core, libfabric.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:28 +02:00
ae5947b0ef
gnu: Add libfabric.
...
* gnu/packages/linux.scm (libfabric): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:28 +02:00
3eb7c00038
gnu: libnl: Add "python2" and "python3" outputs.
...
* gnu/packages/linux.scm (libnl)[native-inputs]: Add SWIG and PKG-CONFIG.
[inputs]: Add PYTHON-2 and PYTHON-3.
[outputs]: Add python2, python3.
[arguments]: Add 'install-python' phase.
Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:27 +02:00
d80a47f2f5
gnu: libnl: Add "doc" output.
...
* gnu/packages/linux.scm (libnl)[native-inputs]: Add doc origin.
[outputs]: New field.
[arguments]: Add 'install-doc' phase. New field.
Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2017-08-18 00:36:27 +02:00
d016b60fa3
gnu: wireshark: Update to 2.4.0.
...
* gnu/packages/networking.scm (wireshark): Update to 2.4.0. Add "libssh",
"libxml2", "qtbase" and "qttools" as inputs. Remove unused "bison", "flex"
and "gtk+" inputs.
2017-08-18 00:17:24 +02:00
9fa0c0e6fa
gnu: libmspack: Update to 0.6 [fixes CVE-2017-{6419,11423}].
...
* gnu/packages/compression.scm (libmspack): Update to 0.6.
2017-08-17 22:32:51 +02:00
2d72ddf529
gnu: linux-libre: Update to 4.12.8.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.8.
(%linux-libre-hash): Update hash.
2017-08-17 14:41:18 -04:00
1e070766c0
gnu: linux-libre@4.9: Update to 4.9.44.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.44.
2017-08-17 14:40:29 -04:00
821f18719d
gnu: linux-libre@4.4: Update to 4.4.83.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.83.
2017-08-17 14:39:31 -04:00
f2d7a492df
web: Check for the existance of SSL related files.
...
This adds back the previous behaviour of the nginx-service-type, where the
service would check at the time when the configuration is generated if the SSL
certificate and certificate key file exists.
* gnu/services/web.scm (emit-nginx-server-config): Add back check for SSL
related files.
2017-08-17 18:32:27 +01:00
c9aa261be4
gnu: services: Nginx configs can reference store
...
* gnu/services/web.scm (config-domain-strings, config-index-strings): Emit
lists instead of strings.
(emit-nginx-location-config, emit-nginx-server-config)
(emit-nginx-upstream-config): Rename from nginx-location-config,
default-nginx-server-config, and nginx-upstream-config. Emit lists instead of
strings.
(flatten): New helper.
(default-nginx-config): Use flatten helper to write nginx conf. This allows
location configs to reference store values.
Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-08-17 18:32:23 +01:00
e9a599cdce
gnu: Add OpenMW.
...
* gnu/packages/game-development.scm (openmw): New variable.
2017-08-17 19:40:33 +03:00
42d0d13de8
gnu: Add mygui.
...
* gnu/packages/game-development.scm (mygui): New variable.
2017-08-17 19:35:28 +03:00
dd75a9a22c
gnu: Add ogre.
...
* gnu/packages/graphics.scm (ogre): New variable.
2017-08-17 19:11:35 +03:00
bf3fa99654
gnu: Add r-methylkit.
...
* gnu/packages/bioinformatics.scm (r-methylkit): New variable.
2017-08-17 18:00:17 +02:00
8a39e4a553
gnu: sassc: Update to 3.4.5.
...
* gnu/packages/web.scm (sassc): Update to 3.4.5.
[arguments]: Add PREFIX to make-flags, disable tests, remove custom install
phase.
2017-08-17 18:00:17 +02:00
f30ff28b96
gnu: mariadb: Update to 10.1.26 [fixes CVE-2017-{3636,3641,3653}].
...
* gnu/packages/databases.scm (mariadb): Update to 10.1.26.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-08-17 11:40:29 -04:00
05e8a3ef0f
gnu: Add r-ksamples.
...
* gnu/packages/cran.scm (r-ksamples): New variable.
2017-08-17 17:26:13 +02:00
abcb849405
gnu: Add r-suppdists.
...
* gnu/packages/cran.scm (r-suppdists): New variable.
2017-08-17 17:26:12 +02:00
8d22007380
gnu: Add r-energy.
...
* gnu/packages/cran.scm (r-energy): New variable.
2017-08-17 17:26:12 +02:00
6b4a9aec23
gnu: Add r-fitdistrplus.
...
* gnu/packages/cran.scm (r-fitdistrplus): New variable.
2017-08-17 17:26:12 +02:00
521e0703d8
gnu: Add r-limsolve.
...
* gnu/packages/cran.scm (r-limsolve): New variable.
2017-08-17 17:26:12 +02:00
a3e36d3772
gnu: Add r-lpsolve.
...
* gnu/packages/cran.scm (r-lpsolve): New variable.
2017-08-17 17:26:12 +02:00
212f612040
gnu: Add r-qvalue.
...
* gnu/packages/bioinformatics.scm (r-qvalue): New variable.
2017-08-17 17:26:12 +02:00
d4a1e918cb
gnu: Add r-fastseg.
...
* gnu/packages/bioinformatics.scm (r-fastseg): New variable.
2017-08-17 17:26:11 +02:00
b31e4a9693
gnu: Add r-emdbook.
...
* gnu/packages/cran.scm (r-emdbook): New variable.
2017-08-17 17:26:11 +02:00
97cb349dc1
gnu: r-trimcluster: Update license.
...
* gnu/packages/statistics.scm (r-trimcluster)[license]: Also specify GPLv3+.
2017-08-17 17:26:11 +02:00
8c72b83096
gnu: Add r-bbmle.
...
* gnu/packages/cran.scm (r-bbmle): New variable.
2017-08-17 17:26:11 +02:00
d6b156dc04
gnu: Add r-inline.
...
* gnu/packages/cran.scm (r-inline): New variable.
2017-08-17 17:26:11 +02:00
062b6dbd25
gnu: Add r-lmtest.
...
* gnu/packages/cran.scm (r-lmtest): New variable.
2017-08-17 17:26:11 +02:00
58db98c9f2
gnu: Add r-extremes.
...
* gnu/packages/cran.scm (r-extremes): New variable.
2017-08-17 17:26:10 +02:00
28476b4bc0
gnu: Add r-distillery.
...
* gnu/packages/cran.scm (r-distillery): New variable.
2017-08-17 17:26:10 +02:00
6427e62005
gnu: Add r-lmoments.
...
* gnu/packages/cran.scm (r-lmoments): New variable.
2017-08-17 17:26:10 +02:00
e389d10f55
gnu: Add r-rmtstat.
...
* gnu/packages/cran.scm (r-rmtstat): New variable.
2017-08-17 17:26:10 +02:00
b723dedf81
gnu: Add r-rook.
...
* gnu/packages/web.scm (r-rook): New variable.
2017-08-17 17:26:10 +02:00
bc0081e76f
gnu: Add r-sp.
...
* gnu/packages/cran.scm (r-sp): New variable.
2017-08-17 17:26:10 +02:00
3349faecf5
gnu: Add r-proxy.
...
* gnu/packages/cran.scm (r-proxy): New variable.
2017-08-17 17:26:10 +02:00
ac8402072b
gnu: Add r-ggally.
...
* gnu/packages/cran.scm (r-ggally): New variable.
2017-08-17 17:26:09 +02:00
c9c6f4b543
gnu: Add r-progress.
...
* gnu/packages/cran.scm (r-progress): New variable.
2017-08-17 17:26:09 +02:00
71be51d531
gnu: Add r-reshape.
...
* gnu/packages/cran.scm (r-reshape): New variable.
2017-08-17 17:26:09 +02:00
18a16ceb7c
gnu: Add r-prettyunits.
...
* gnu/packages/cran.scm (r-prettyunits): New variable.
2017-08-17 17:26:09 +02:00
49c9c29790
gnu: Add r-ffbase.
...
* gnu/packages/cran.scm (r-ffbase): New variable.
2017-08-17 17:26:09 +02:00
a7f0faa204
gnu: Add r-ff.
...
* gnu/packages/cran.scm (r-ff): New variable.
2017-08-17 17:26:09 +02:00
f2e974e1a2
gnu: Add r-fastmatch.
...
* gnu/packages/cran.scm (r-fastmatch): New variable.
2017-08-17 17:26:09 +02:00
e0268ff2e4
gnu: Add r-getoptlong.
...
* gnu/packages/cran.scm (r-getoptlong): New variable.
2017-08-17 17:26:08 +02:00
d3c67e1b45
gnu: Add r-dendextend.
...
* gnu/packages/cran.scm (r-dendextend): New variable.
2017-08-17 17:26:08 +02:00
0548660420
gnu: Add r-compare.
...
* gnu/packages/cran.scm (r-compare): New variable.
2017-08-17 17:26:08 +02:00
eb60149eee
gnu: Add r-png.
...
* gnu/packages/image.scm (r-png): New variable.
2017-08-17 17:26:08 +02:00
5cc79c9c50
gnu: Add r-powerlaw.
...
* gnu/packages/cran.scm (r-powerlaw): New variable.
2017-08-17 17:25:47 +02:00
2856369fad
gnu: Add r-circlize.
...
* gnu/packages/cran.scm (r-circlize): New variable.
2017-08-17 17:25:47 +02:00
4847a62ea9
gnu: Add r-globaloptions.
...
* gnu/packages/cran.scm (r-globaloptions): New variable.
2017-08-17 17:25:47 +02:00
2bdb5c3f78
gnu: Add r-shape.
...
* gnu/packages/cran.scm (r-shape): New variable.
2017-08-17 17:25:47 +02:00
c69d27db57
gnu: Add r-calibrate.
...
* gnu/packages/cran.scm (r-calibrate): New variable.
2017-08-17 17:25:47 +02:00
33ce12e293
gnu: Add r-auc.
...
* gnu/packages/cran.scm (r-auc): New variable.
2017-08-17 17:25:47 +02:00
4a007ffafe
gnu: Add r-annotationhub.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): New variable.
2017-08-17 17:25:47 +02:00
5f96f30f5d
gnu: Add r-interactivedisplaybase.
...
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): New variable.
2017-08-17 17:25:46 +02:00
a71fd67175
gnu: american-fuzzy-lop: Update to 2.49b.
...
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 2.49b.
2017-08-17 18:17:00 +03:00
aacefef222
gnu: american-fuzzy-lop: Add support for non-Intel architectures.
...
* gnu/packages/debug.scm (americal-fuzzy-lop): Add qemu target for
non-Intel targets.
[arguments]: On non-Intel systems, add phase to disable non-Intel
architecture warning and remove incompatible binaries.
2017-08-17 18:16:57 +03:00
721e1987d0
gnu: Add mgba.
...
* gnu/packages/games.scm (mgba): New public variable.
2017-08-17 10:56:04 +02:00
a6d05444ab
gnu: cuirass: Update to 0.0.1-7.6f85bc0.
...
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-7.6f85bc0.
[arguments]: Add guile-git and guile-bytestructures to the load path.
[inputs]: Remove git, add guile-git and guile-bytestructures.
2017-08-17 09:12:46 +02:00
e3b861ce38
gnu: python-cython: Update to 0.26.
...
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26.
[source]: Remove patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-17 06:46:06 +03:00
d6ef422fe7
gnu: Add fbreader.
...
* gnu/packages/ebook.scm (fbreader): New variable.
2017-08-17 02:00:51 +02:00
84a52639c9
gnu: Add liblinebreak.
...
* gnu/packages/ebook.scm (liblinebreak): New variable.
2017-08-17 01:56:38 +02:00
f73f1f0769
gnu: python-cryptography-vectors: Update to 2.0.3.
...
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
2017-08-16 22:35:11 +02:00
f37995fa20
gnu: python-cryptography: Update to 2.0.3.
...
* gnu/packages/python.scm (python-cryptography): Update to 2.0.3.
2017-08-16 22:35:10 +02:00
f886e7cab1
gnu: limnoria: Update to 2017.08.03.
...
* gnu/packages/irc.scm (limnoria): Update to 2017.08.03.
2017-08-16 22:35:10 +02:00
e2a4c13023
gnu: cbatticon: Update to 1.6.6.
...
* gnu/packages/admin.scm (cbatticon): Update to 1.6.6.
2017-08-16 22:35:10 +02:00
f207984985
gnu: Add gpick.
...
* gnu/packages/image.scm (gpick): New variable.
2017-08-16 21:37:33 +03:00
d0b13d7b9b
gnu: fossil: Update to 2.2.
...
* gnu/packages/version-control.scm (fossil): Update to 2.2.
[source]: Add uri for older versions.
[arguments]: Enable previously disabled test.
2017-08-16 21:37:32 +03:00
ab1bd285db
gnu: connman: Update to 1.35.
...
* gnu/packages/connman.scm (connman): Update to 1.35.
2017-08-16 21:37:29 +03:00
e664200c0c
gnu: Add ltris.
...
* gnu/packages/games.scm (ltris): New variable.
2017-08-16 11:28:12 -04:00
af4db693db
gnu: Add ghc-gitrev.
...
* gnu/packages/haskell.scm (ghc-gitrev): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
e0ca14c7a8
gnu: Add ghc-geniplate-mirror.
...
* gnu/packages/haskell.scm (ghc-geniplate-mirror): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
298af2a8da
gnu: Add ghc-monadplus.
...
* gnu/packages/haskell.scm (ghc-monadplus): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
005a08e3dc
gnu: Add ghc-fail.
...
* gnu/packages/haskell.scm (ghc-fail): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
1eced2a7a8
gnu: Add ghc-edisoncore.
...
* gnu/packages/haskell.scm (ghc-edisoncore): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
212ae09541
gnu: Add ghc-edisonapi.
...
* gnu/packages/haskell.scm (ghc-edisonapi): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
a623fd7fed
gnu: Add ghc-murmur-hash.
...
* gnu/packages/haskell.scm (ghc-murmur-hash): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:38 +02:00
ca48a34594
gnu: Add ghc-data-hash.
...
* gnu/packages/haskell.scm (ghc-data-hash): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:38 +02:00
adcb30642c
gnu: pspp: Update to 0.11.0.
...
This fixes CVE-2017-10791, CVE-2017-10792.
* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
2017-08-16 17:57:40 +03:00
96f23b62e0
gnu: Add ghc-equivalence.
...
* gnu/packages/haskell.scm (ghc-equivalence): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
3f8b8e731c
gnu: Add ghc-boxes.
...
* gnu/packages/haskell.scm (ghc-boxes): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
be04f8020a
gnu: Add ghc-edit-distance.
...
* gnu/packages/haskell.scm (ghc-edit-distance): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
867ed9776c
gnu: Add ghc-stmonadtrans.
...
* gnu/packages/haskell.scm (ghc-stmonadtrans): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:12 +02:00
f99a57dc28
gnu: Add ghc-strict.
...
* gnu/packages/haskell.scm (ghc-strict): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:12 +02:00
c12562e1e8
gnu: cpphs: Update to 1.20.8.
...
* gnu/packages/haskell.scm (cpphs): Update to 1.20.8.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:08 +02:00
2f7966c8e2
gnu: font-google-noto: Use font-build-system.
...
* gnu/packages/fonts.scm (font-google-noto)[build-system]: Use
font-build-system.
[source]: Use url-fetch/zipbomb.
[arguments]: Remove it.
[native-inputs]: Remove it.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:18:50 +02:00
d534f3a4d3
gnu: r-mzr: Fix building on aarch64 and armhf.
...
* gnu/packages/bioinformatics.scm (r-mzr)[inputs]: Add boost.
2017-08-16 12:36:25 +03:00
953a12fa9b
gnu: hdf4: Fix building on aarch64.
...
* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve
detection and support for aarch64-linux.
2017-08-16 09:33:11 +03:00
8343d373d5
gnu: cgit: Don't build cgit's special 'git:src' input.
...
This special version of Git is only used within the build process of
cgit. We don't need to build it otherwise, so the package is removed
with this commit.
* gnu/packages/version-control.scm (cgit)[inputs]: Replace the git@2.10
package with an origin reference of the source code.
(git@2.10 ): Remove variable.
2017-08-15 17:59:22 -04:00
6230e155af
gnu: Fix memcached service startup.
...
Memcached changes to the memcached user from root before writing the PID
file. This means that it must be able to write the PID file as the memcached
user.
To make this work, create the /var/run/memcached directory when the service
starts, make it owned by memcached, and change memcached to write the PID file
to /var/run/memcached/pid.
This wasn't picked up by the system test as the "service running" part was too
permissive, and only failed on an error. Instead, test the response from
calling start-service and check that the PID is a number.
* gnu/services/databases.scm (memcached-activation): New variable.
(memcached-shepherd-service): Change PID file location.
(memcached-service-type): Extend the activation-service-type.
* gnu/tests/databases.scm (run-memcached-test)[test]: Change the "service
running" test to check the response from the shepherd.
2017-08-15 22:24:15 +01:00
2434f5cedf
gnu: Add dssi.
...
* gnu/packages/music.scm (dssi): New variable.
2017-08-15 20:58:03 +02:00
425d66f7a7
gnu: Add emacs-highlight-symbol.
...
* gnu/packages/emacs.scm (emacs-highlight-symbol): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-15 20:52:58 +02:00
be69176bbd
gnu: fish-guix: Use new download URL.
...
* gnu/packages/shells.scm (fish-guix)[source]: Adjust the download URL.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-15 20:41:23 +02:00
dca82aefbc
gnu: p11-kit: Update to 0.23.8.
...
* gnu/packages/tls.scm (p11-kit): Update to 0.23.8.
2017-08-15 20:38:02 +02:00
6550e5ad64
gnu: signify: Update to 22.
...
* gnu/packages/crypto.scm (signify): Update to 22.
2017-08-15 13:27:30 -04:00
06f31e50b1
gnu: diamond: Update to 0.9.10.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.10.
2017-08-15 18:49:33 +10:00
3837108e40
gnu: bcftools: Fix building on aarch64.
...
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: New file.
* gnu/packages/bioinformatics.scm (bcftools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-08-15 10:31:20 +03:00
Arun Isaac